Prupe.8G009600_v2.0.a1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000110
Physical Location & Seq
Reverse (-)
738092 .. 741734
3643 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G009600.1

Sequence Viewer

Length: 2754 bp
ATGGCCTTACCAATAGACTTCTTGATCGGCAAAATTGTGACCATTCTTGAGACCGAAGCATCCTTCATAGCCGGTGTTTGTGATGAAATTGATGACCTCAAGCAGGAGCTTGTATGCATGAAGGCCTTTCTAAATGATTCTGAGGGCAAGAAGGCACTCACCGAAGGTGGGGAGACGTGGGTTGCAAGCGTCAGAGGCATGGCCTATGATGCTGAAGACATCATTGACGAGTTCATGTATCACATGTATGAGCAAGGATGTCATAAGAGCAGATTTGCAAGGTGGCTCCACCATACCATTCGCATTCCGCAGAATGTTTGGTTCAGACGTCAAATGTCAGAGAAGTTGCGGAAAATCTCAAGAATGATTAAAGCCATTCCGGAGAGGAATCAGAGATATGGTGTCGGTGGATTAGAAGGAGCAAGTAGTACTTGTGATGATGTCCGTAAATGGATGCGGAACCAAGCGGAATCTTCTCTTTTTATTAAGGAAGATGAGCTCGTGGGGATTGAAAGAAAGAAGCAACTATTGATGAATTGGTTGATGAATGGAGAGCAACAGCAAACGGTTATCTCTGTGGTGGGGATGGGCGGATCAGGGAAGACAACTTTAGTTGCCAAGACCTTCAACGACGAAAGGGTCAAGAAACAATTCCACTGTTGTGCTTGGCTAACTGTTTCACAAACTTATGAAATTGAAGACTTGTTTAGAAGCTTGATTAAGCAATTCCACGAAACAAGTTTGGAAAAGGTCCCTGCAGACATGAATTCCATGACATACAGAGAATTGCTACAGGTGCTGGTCAATTACTTGGAGTCTAAAAGGTACATGGTTGTATTGGATGATGTGTGGGATATCAAACTTTGGAAAGAAATGAGGATAGCACTCCCAAATACACAGTTTGGAAGTCGAATCATGCTTACCACTCGAAGAGAAGACGTAGCATCCTATTCTTTTGGAGTACAAAGTCATATTCACCACATTCAACCCCTCGAAAAGAATGATGCTTGGGAGCTATTCAGCAGCAAAGCATTCTCTGCTTACCAGAATAAATGTTGTCCACCAGATCTTCAATCATTGGCTAAGGAACTTGTAGAAAAGTGTGTAGGCCTACCTCTGGCAGTCGTGGCTTTAGGTGGTCTGATGTCTTCCAAGAAGTCATTAGAATGGATCAAAGTCTACAACAGCTTGAACTGGCATCTAACTAACCATCCGTTGCTAGAGCCAGTGAAGAGCATCTTGTTGTTTAGTTTTGATGATTTACCATACCCATTGAAGCACTGTTTTCTATACTGTTCCCTTTTTCCAGCAGACTATTTGATTCGAAGAAAAAGGCTCATTAGGTTGTGGATAGCTGAAGGGTTTGTTGAAGATGTCAAAGGCGCCACATCAGAAGAAGTTGCTGAGAGCTATCTTATGGAGCTCATTTTCCGTAGCATGCTACATGTTGTCTGGAGGAATGCAAGTGGAAGGCCAAAAGCATTCAAGATGCATGACCTTATGCGGGAGCTTGCTCTGTCTAAATCAGAAAAAGAAAAGTTTGGTGCTGTATATGATGGAAAAGAAGTTATGGACGAAGTTCAAGTTCGCCGCTTGTCAATTAAAACCACTGGAGGAGAAATTAAATTAGGCACTGTTATGGCACAACTTCGTTCTCTTCTTGTGTTTGTTACTGACATGTCCTCATCCTCTTCCTCGAATACATTGCCTTCTGGATTCAAATTGTTGAGGGTGCTAGATTTGGGATATGTTCCAATTGCTATACTGCCAAAAGAACTTGAGTACTTATTCAATTTAAGATACTTAAATTTAAGGGGAACTCCAGTTAAGAAGCTTCCTGAATCCATTGGAAAGCTCCGGAACCTTCAAACTTTGGATATCAGGAACTCAAAGATAGAGGCACTTCCAAGTGGAATTGCCAAGTTGCAAAACTTGCGTCATCTAATGATGTATCGTTACACTGAAGAGCCTAGGGCCTTCAGATATGTGAATGGGACAAGATCACCATCAAATATATGTATGTTGAAGAAATTGCAAGTTTTGGCGGTTGTTGAATTAGAAGGAAACATTGTTAGACTTGTGGGTAATATGACCCAACTTAGAAGGATTGGAATTTCGAATGTAAAAGAAAGAGATGAGATGGACCTATGTGCCTCAATTCAAAAGATGAAGCTCCTTCACCAGTTGGTTCTGAAGACAAGCGATGAAGAGGAAGTTCTTCAAACAAACGCACTATGCTCACCTCCTCCCCACCTTCGAAGGGTTATTTTGGTTGGCAAATTGGAAATTGTGCCACGTTGGTTTGTTTCACTCCAGAGCCTCACACAATTGTATCTGCATTGGTCTAGAATTGAAGAAGATTTACTACCTTACATTGAAGCACTGCCCAATCTGGGAAATCTTTCACTTATTAATGCATATGCTGGCAAAGAGTTATGTTTCAGCAGAGGCTTTGCAAAGCTTACGAGATTGCGTTTGTCTACTTGCCCCTTATTGAACAATGTAAATATAGAAAAAGGGGTGATGTCAAATCTCCAAACCTTATGGTTTGATAACTGCCCAGAACTAAACACAATGCCACAGGGTCTTCAATACCTCACTGAACTAAAAGTATTGACATTGGGGCTTGTATCAAAGGAACTTAAGGATTCCATAAGAGAAGGCGGTGTGGATCGTGAAAAGGTACAACACATCCCTGAGATCTACCATTATTACAAATCGTCACTGGGGTTGCGTCGTGAAAGCTTGTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

918

Amino Acids

105.28

Weight (kDa)

8.8

Isoelectric Point (pI)

54.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 638
AatII GACGTC 1 cut(s) 331
AccB1I GGYRCC 1 cut(s) 1382
AccI GTMKAC 2 cut(s) 1179, 2480
AccIII TCCGGA 2 cut(s) 379, 1857
AciI CCGC 9 cut(s) 308, 349, 457, 467, 591, 1504, 1591, 2045, 2664
AclWI GGATC 3 cut(s) 601, 1178, 2679
AcsI RAATTY 3 cut(s) 766, 1807, 2112
AcuI CTGAAG 5 cut(s) 234, 1377, 1963, 1983, 2213
AcyI GRCGYC 2 cut(s) 328, 1383
AfaI GTAC 5 cut(s) 430, 827, 963, 1784, 2685
AfiI CCNNNNNNNGG 6 cut(s) 103, 168, 1117, 1504, 2260, 2393
AflII CTTAAG 1 cut(s) 2642
AflIII ACRYGT 3 cut(s) 243, 1444, 1677
AjiI CACGTC 1 cut(s) 177
AleI CACNNNNGTG 1 cut(s) 660
Alw21I GWGCWC 2 cut(s) 501, 1425
Alw26I GTCTC 2 cut(s) 44, 167
AlwI GGATC 3 cut(s) 601, 1178, 2679
AlwNI CAGNNNCTG 1 cut(s) 799
Aor13HI TCCGGA 2 cut(s) 379, 1857
AoxI GGCC 6 cut(s) 3, 123, 201, 1108, 1472, 1974
ApeKI GCWGC 1 cut(s) 1023
ApoI RAATTY 3 cut(s) 766, 1807, 2112
ArsI GACNNNNNNTTYG 2 cut(s) 1921, 1953
AseI ATTAAT 1 cut(s) 2412
Asp700I GAANNNNTTC 3 cut(s) 650, 2217, 2401
AspA2I CCTAGG 1 cut(s) 1970
AspLEI GCGC 1 cut(s) 1385
AspS9I GGNCC 3 cut(s) 751, 1974, 2143
AsuHPI GGTGA 6 cut(s) 151, 968, 1995, 2171, 2232, 2533
AsuII TTCGAA 3 cut(s) 1324, 2117, 2257
AvaII GGWCC 2 cut(s) 751, 2143
AvrII CCTAGG 1 cut(s) 1970
BaeI ACNNNNGTAYC 2 cut(s) 2315, 2348
BanI GGYRCC 1 cut(s) 1382
BanII GRGCYC 2 cut(s) 501, 1425
BarI GAAGNNNNNNTAC 4 cut(s) 2346, 2349, 2378, 2381
BauI CACGAG 1 cut(s) 500
BbsI GAAGAC 7 cut(s) 222, 608, 705, 942, 1140, 2201, 2579
Bbv12I GWGCWC 2 cut(s) 501, 1425
BbvI GCAGC 1 cut(s) 1035
BccI CCATC 5 cut(s) 580, 1218, 1550, 2014, 2134
BcgI CGANNNNNNTGC 2 cut(s) 1687, 1721
BcoDI GTCTC 2 cut(s) 44, 167
BfaI CTAG 4 cut(s) 1220, 1736, 1971, 2346
BfmI CTRYAG 2 cut(s) 756, 791
BfoI RGCGCY 1 cut(s) 1386
BfrI CTTAAG 1 cut(s) 2642
BglII AGATCT 2 cut(s) 1066, 2700
BisI GCNGC 2 cut(s) 1024, 1591
BlnI CCTAGG 1 cut(s) 1970
BlsI GCNGC 2 cut(s) 1025, 1592
BmcAI AGTACT 2 cut(s) 430, 1784
Bme18I GGWCC 2 cut(s) 751, 2143
BmgBI CACGTC 1 cut(s) 177
BmgT120I GGNCC 3 cut(s) 751, 1974, 2143
BmiI GGNNCC 5 cut(s) 287, 461, 753, 1384, 1862
BmrI ACTGGG 1 cut(s) 2735
BmsI GCATC 8 cut(s) 68, 199, 444, 953, 994, 1207, 1245, 1479
BmuI ACTGGG 1 cut(s) 2735
BpiI GAAGAC 7 cut(s) 222, 608, 705, 942, 1140, 2201, 2579
BpmI CTGGAG 4 cut(s) 1474, 1632, 1806, 2297
Bpu10I CCTNAGC 1 cut(s) 1083
Bpu14I TTCGAA 3 cut(s) 1324, 2117, 2257
BpuEI CTTGAG 4 cut(s) 68, 83, 343, 1799
BsaBI GATNNNNATC 1 cut(s) 2005
BsaHI GRCGYC 2 cut(s) 328, 1383
BsaI GGTCTC 1 cut(s) 44
BsaJI CCNNGG 1 cut(s) 1970
BsaWI WCCGGW 2 cut(s) 379, 1857
Bsc4I CCNNNNNNNGG 6 cut(s) 103, 168, 1117, 1504, 2260, 2393
Bse118I RCCGGY 1 cut(s) 71
Bse1I ACTGG 6 cut(s) 1199, 1226, 1615, 1823, 2182, 2730
Bse3DI GCAATG 1 cut(s) 1703
Bse8I GATNNNNATC 1 cut(s) 2005
BseAI TCCGGA 2 cut(s) 379, 1857
BseDI CCNNGG 1 cut(s) 1970
BseGI GGATG 9 cut(s) 59, 263, 459, 591, 847, 944, 1210, 1685, 2691
BseJI GATNNNNATC 1 cut(s) 2005
BseLI CCNNNNNNNGG 6 cut(s) 103, 168, 1117, 1504, 2260, 2393
BseMI GCAATG 1 cut(s) 1703
BseMII CTCAG 3 cut(s) 132, 1395, 2688
BseNI ACTGG 6 cut(s) 1199, 1226, 1615, 1823, 2182, 2730
BseRI GAGGAG 2 cut(s) 1629, 2235
BseXI GCAGC 1 cut(s) 1035
BshFI GGCC 6 cut(s) 5, 125, 203, 1110, 1474, 1976
BshNI GGYRCC 1 cut(s) 1382
BsiHKAI GWGCWC 2 cut(s) 501, 1425
BsiSI CCGG 3 cut(s) 72, 380, 1858
BslFI GGGAC 2 cut(s) 737, 2008
BslI CCNNNNNNNGG 6 cut(s) 103, 168, 1117, 1504, 2260, 2393
BsmAI GTCTC 2 cut(s) 44, 167
BsmBI CGTCTC 1 cut(s) 167
BsmFI GGGAC 2 cut(s) 737, 2008
BsmI GAATGC 4 cut(s) 303, 1031, 1465, 1481
BsnI GGCC 6 cut(s) 5, 125, 203, 1110, 1474, 1976
Bso31I GGTCTC 1 cut(s) 44
Bsp119I TTCGAA 3 cut(s) 1324, 2117, 2257
Bsp1286I GDGCHC 2 cut(s) 501, 1425
Bsp13I TCCGGA 2 cut(s) 379, 1857
Bsp143I GATC 7 cut(s) 24, 593, 1066, 1170, 2000, 2671, 2700
BspACI CCGC 9 cut(s) 308, 349, 457, 467, 591, 1504, 1591, 2045, 2664
BspANI GGCC 6 cut(s) 5, 125, 203, 1110, 1474, 1976
BspCNI CTCAG 3 cut(s) 133, 1396, 2689
BspEI TCCGGA 2 cut(s) 379, 1857
BspLI GGNNCC 5 cut(s) 287, 461, 753, 1384, 1862
BspMAI CTGCAG 1 cut(s) 760
BspPI GGATC 3 cut(s) 601, 1178, 2679
BspQI GCTCTTC 2 cut(s) 1226, 1959
BspT104I TTCGAA 3 cut(s) 1324, 2117, 2257
BspT107I GGYRCC 1 cut(s) 1382
BspTI CTTAAG 1 cut(s) 2642
BspTNI GGTCTC 1 cut(s) 44
BsrDI GCAATG 1 cut(s) 1703
BsrFI RCCGGY 1 cut(s) 71
BsrI ACTGG 6 cut(s) 1199, 1226, 1615, 1823, 2182, 2730
BssAI RCCGGY 1 cut(s) 71
BssECI CCNNGG 1 cut(s) 1970
BssMI GATC 7 cut(s) 24, 593, 1066, 1170, 2000, 2671, 2700
BssNI GRCGYC 2 cut(s) 328, 1383
BssSI CACGAG 1 cut(s) 500
BssT1I CCWWGG 1 cut(s) 1970
Bst2BI CACGAG 1 cut(s) 500
Bst4CI ACNGT 7 cut(s) 568, 659, 676, 900, 1283, 1295, 1636
Bst6I CTCTTC 6 cut(s) 925, 1226, 1662, 1696, 1959, 2202
BstACI GRCGYC 2 cut(s) 328, 1383
BstAFI CTTAAG 1 cut(s) 2642
BstAPI GCANNNNNTGC 2 cut(s) 1037, 1933
BstBI TTCGAA 3 cut(s) 1324, 2117, 2257
BstC8I GCNNGC 4 cut(s) 187, 1439, 1512, 2425
BstDEI CTNAG 5 cut(s) 141, 1083, 1404, 2099, 2697
BstENI CCTNNNNNAGG 1 cut(s) 101
BstF5I GGATG 9 cut(s) 59, 263, 459, 591, 847, 944, 1210, 1685, 2691
BstH2I RGCGCY 1 cut(s) 1386
BstHHI GCGC 1 cut(s) 1385
BstKTI GATC 7 cut(s) 27, 596, 1069, 1173, 2003, 2674, 2703
BstMAI GTCTC 2 cut(s) 44, 167
BstMBI GATC 7 cut(s) 24, 593, 1066, 1170, 2000, 2671, 2700
BstMWI GCNNNNNNNGC 6 cut(s) 195, 209, 796, 1037, 1127, 1933
BstNSI RCATGY 4 cut(s) 247, 1441, 1448, 1681
BstSFI CTRYAG 2 cut(s) 756, 791
BstV1I GCAGC 1 cut(s) 1035
BstV2I GAAGAC 7 cut(s) 222, 608, 705, 942, 1140, 2201, 2579
BstX2I RGATCY 2 cut(s) 1066, 2700
BstYI RGATCY 2 cut(s) 1066, 2700
BsuRI GGCC 6 cut(s) 5, 125, 203, 1110, 1474, 1976
BtgZI GCGATG 1 cut(s) 2217
BtrI CACGTC 1 cut(s) 177
BtsCI GGATG 9 cut(s) 59, 263, 459, 591, 847, 944, 1210, 1685, 2691
BtsI GCAGTG 1 cut(s) 2381
BtsIMutI CAGTG 9 cut(s) 655, 1233, 1279, 1608, 1632, 1959, 2381, 2598, 2723
Cac8I GCNNGC 4 cut(s) 187, 1439, 1512, 2425
CaiI CAGNNNCTG 1 cut(s) 799
CfoI GCGC 1 cut(s) 1385
Cfr10I RCCGGY 1 cut(s) 71
Cfr13I GGNCC 3 cut(s) 751, 1974, 2143
CseI GACGC 3 cut(s) 178, 1925, 2723
Csp6I GTAC 5 cut(s) 429, 826, 962, 1783, 2684
CviQI GTAC 5 cut(s) 429, 826, 962, 1783, 2684
DdeI CTNAG 5 cut(s) 141, 1083, 1404, 2099, 2697
DinI GGCGCC 1 cut(s) 1384
DpnI GATC 7 cut(s) 26, 595, 1068, 1172, 2002, 2673, 2702
DpnII GATC 7 cut(s) 24, 593, 1066, 1170, 2000, 2671, 2700
DrdI GACNNNNNNGTC 1 cut(s) 638
DseDI GACNNNNNNGTC 1 cut(s) 638
Eam1104I CTCTTC 6 cut(s) 925, 1226, 1662, 1696, 1959, 2202
EarI CTCTTC 6 cut(s) 925, 1226, 1662, 1696, 1959, 2202
EciI GGCGGA 1 cut(s) 606
Ecl136II GAGCTC 2 cut(s) 499, 1423
Eco130I CCWWGG 1 cut(s) 1970
Eco147I AGGCCT 2 cut(s) 125, 1110
Eco24I GRGCYC 2 cut(s) 501, 1425
Eco31I GGTCTC 1 cut(s) 44
Eco32I GATATC 2 cut(s) 856, 1879
Eco47I GGWCC 2 cut(s) 751, 2143
Eco53kI GAGCTC 2 cut(s) 499, 1423
Eco57I CTGAAG 5 cut(s) 234, 1377, 1963, 1983, 2213
EcoICRI GAGCTC 2 cut(s) 499, 1423
EcoNI CCTNNNNNAGG 1 cut(s) 101
EcoO109I RGGNCCY 2 cut(s) 751, 1974
EcoRI GAATTC 1 cut(s) 766
EcoRV GATATC 2 cut(s) 856, 1879
EcoT14I CCWWGG 1 cut(s) 1970
EcoT22I ATGCAT 3 cut(s) 119, 1494, 2419
EcoT38I GRGCYC 2 cut(s) 501, 1425
EgeI GGCGCC 1 cut(s) 1384
EheI GGCGCC 1 cut(s) 1384
ErhI CCWWGG 1 cut(s) 1970
Esp3I CGTCTC 1 cut(s) 167
FalI AAGNNNNNCTT 4 cut(s) 415, 447, 1223, 1255
FaqI GGGAC 2 cut(s) 737, 2008
FauI CCCGC 1 cut(s) 1497
FauNDI CATATG 1 cut(s) 2419
FblI GTMKAC 2 cut(s) 1179, 2480
Fnu4HI GCNGC 2 cut(s) 1024, 1591
FokI GGATG 9 cut(s) 46, 270, 466, 598, 854, 931, 1197, 1672, 2678
FriOI GRGCYC 2 cut(s) 501, 1425
Fsp4HI GCNGC 2 cut(s) 1024, 1591
FspBI CTAG 4 cut(s) 1220, 1736, 1971, 2346
GlaI GCGC 1 cut(s) 1384
GluI GCNGC 2 cut(s) 1024, 1591
GsuI CTGGAG 4 cut(s) 1474, 1632, 1806, 2297
HaeII RGCGCY 1 cut(s) 1386
HaeIII GGCC 6 cut(s) 5, 125, 203, 1110, 1474, 1976
HapII CCGG 3 cut(s) 72, 380, 1858
HgaI GACGC 3 cut(s) 178, 1925, 2723
HhaI GCGC 1 cut(s) 1385
Hin1I GRCGYC 2 cut(s) 328, 1383
Hin6I GCGC 1 cut(s) 1383
HinP1I GCGC 1 cut(s) 1383
HindIII AAGCTT 4 cut(s) 712, 1832, 2459, 2743
HinfI GANTC 9 cut(s) 137, 388, 470, 815, 912, 1321, 1716, 1841, 2648
HpaII CCGG 3 cut(s) 72, 380, 1858
HphI GGTGA 6 cut(s) 151, 968, 1995, 2171, 2232, 2533
Hpy166II GTNNAC 3 cut(s) 1061, 1180, 2481
Hpy8I GTNNAC 3 cut(s) 1061, 1180, 2481
Hpy99I CGWCG 2 cut(s) 635, 2739
HpyCH4III ACNGT 7 cut(s) 568, 659, 676, 900, 1283, 1295, 1636
HpyCH4IV ACGT 4 cut(s) 176, 328, 939, 2296
HpyF10VI GCNNNNNNNGC 6 cut(s) 195, 209, 796, 1037, 1127, 1933
HpyF3I CTNAG 5 cut(s) 141, 1083, 1404, 2099, 2697
HpySE526I ACGT 4 cut(s) 176, 328, 939, 2296
Hsp92I GRCGYC 2 cut(s) 328, 1383
HspAI GCGC 1 cut(s) 1383
KasI GGCGCC 1 cut(s) 1382
Kpn2I TCCGGA 2 cut(s) 379, 1857
Kzo9I GATC 7 cut(s) 24, 593, 1066, 1170, 2000, 2671, 2700
LguI GCTCTTC 2 cut(s) 1226, 1959
LmnI GCTCC 8 cut(s) 106, 291, 419, 1012, 1420, 1507, 1860, 2178
Lsp1109I GCAGC 1 cut(s) 1035
LweI GCATC 8 cut(s) 68, 199, 444, 953, 994, 1207, 1245, 1479
MaeI CTAG 4 cut(s) 1220, 1736, 1971, 2346
MaeII ACGT 4 cut(s) 176, 328, 939, 2296
MaeIII GTNAC 4 cut(s) 37, 1669, 1955, 2721
MalI GATC 7 cut(s) 26, 595, 1068, 1172, 2002, 2673, 2702
MboI GATC 7 cut(s) 24, 593, 1066, 1170, 2000, 2671, 2700
MfeI CAATTG 2 cut(s) 1755, 2327
MflI RGATCY 2 cut(s) 1066, 2700
MhlI GDGCHC 2 cut(s) 501, 1425
Mly113I GGCGCC 1 cut(s) 1383
MlyI GAGTC 1 cut(s) 824
Mph1103I ATGCAT 3 cut(s) 119, 1494, 2419
MroI TCCGGA 2 cut(s) 379, 1857
MroXI GAANNNNTTC 3 cut(s) 650, 2217, 2401
MslI CAYNNNNRTG 4 cut(s) 246, 660, 1165, 1637
MspCI CTTAAG 1 cut(s) 2642
MspI CCGG 3 cut(s) 72, 380, 1858
MunI CAATTG 2 cut(s) 1755, 2327
Mva1269I GAATGC 4 cut(s) 303, 1031, 1465, 1481
MwoI GCNNNNNNNGC 6 cut(s) 195, 209, 796, 1037, 1127, 1933
NarI GGCGCC 1 cut(s) 1383
NdeI CATATG 1 cut(s) 2419
NdeII GATC 7 cut(s) 24, 593, 1066, 1170, 2000, 2671, 2700
NlaIV GGNNCC 5 cut(s) 287, 461, 753, 1384, 1862
NmuCI GTSAC 2 cut(s) 37, 2721
NsiI ATGCAT 3 cut(s) 119, 1494, 2419
NspI RCATGY 4 cut(s) 247, 1441, 1448, 1681
NspV TTCGAA 3 cut(s) 1324, 2117, 2257
OliI CACNNNNGTG 1 cut(s) 660
PaeI GCATGC 1 cut(s) 1441
PceI AGGCCT 2 cut(s) 125, 1110
PciI ACATGT 3 cut(s) 243, 1444, 1677
PciSI GCTCTTC 2 cut(s) 1226, 1959
PctI GAATGC 4 cut(s) 303, 1031, 1465, 1481
PdmI GAANNNNTTC 3 cut(s) 650, 2217, 2401
PfeI GAWTC 8 cut(s) 137, 388, 470, 912, 1321, 1716, 1841, 2648
PkrI GCNGC 2 cut(s) 1025, 1592
PleI GAGTC 1 cut(s) 823
PluTI GGCGCC 1 cut(s) 1386
PpsI GAGTC 1 cut(s) 823
PpuMI RGGWCCY 1 cut(s) 751
PscI ACATGT 3 cut(s) 243, 1444, 1677
PshBI ATTAAT 1 cut(s) 2412
Psp124BI GAGCTC 2 cut(s) 501, 1425
Psp5II RGGWCCY 1 cut(s) 751
PspN4I GGNNCC 5 cut(s) 287, 461, 753, 1384, 1862
PspPI GGNCC 3 cut(s) 751, 1974, 2143
PspPPI RGGWCCY 1 cut(s) 751
PstI CTGCAG 1 cut(s) 760
PstNI CAGNNNCTG 1 cut(s) 799
PsuI RGATCY 2 cut(s) 1066, 2700
RsaI GTAC 5 cut(s) 430, 827, 963, 1784, 2685
RsaNI GTAC 5 cut(s) 429, 826, 962, 1783, 2684
RseI CAYNNNNRTG 4 cut(s) 246, 660, 1165, 1637
SacI GAGCTC 2 cut(s) 501, 1425
SapI GCTCTTC 2 cut(s) 1226, 1959
SatI GCNGC 2 cut(s) 1024, 1591
Sau3AI GATC 7 cut(s) 24, 593, 1066, 1170, 2000, 2671, 2700
Sau96I GGNCC 3 cut(s) 751, 1974, 2143
ScaI AGTACT 2 cut(s) 430, 1784
SchI GAGTC 1 cut(s) 824
SduI GDGCHC 2 cut(s) 501, 1425
SfaNI GCATC 8 cut(s) 68, 199, 444, 953, 994, 1207, 1245, 1479
SfcI CTRYAG 2 cut(s) 756, 791
SfoI GGCGCC 1 cut(s) 1384
SfuI TTCGAA 3 cut(s) 1324, 2117, 2257
SinI GGWCC 2 cut(s) 751, 2143
SmiMI CAYNNNNRTG 4 cut(s) 246, 660, 1165, 1637
SmlI CTYRAG 5 cut(s) 47, 98, 358, 1778, 2642
SmoI CTYRAG 5 cut(s) 47, 98, 358, 1778, 2642
SphI GCATGC 1 cut(s) 1441
SseBI AGGCCT 2 cut(s) 125, 1110
SsiI CCGC 9 cut(s) 308, 349, 457, 467, 591, 1504, 1591, 2045, 2664
SspDI GGCGCC 1 cut(s) 1382
SspMI CTAG 4 cut(s) 1220, 1736, 1971, 2346
SstI GAGCTC 2 cut(s) 501, 1425
StuI AGGCCT 2 cut(s) 125, 1110
StyI CCWWGG 1 cut(s) 1970
TaaI ACNGT 7 cut(s) 568, 659, 676, 900, 1283, 1295, 1636
TaiI ACGT 4 cut(s) 179, 331, 942, 2299
TaqI TCGA 7 cut(s) 910, 928, 993, 1324, 1697, 2117, 2257
TaqII GACCGA 1 cut(s) 68
TatI WGTACW 3 cut(s) 428, 961, 1782
TauI GCSGC 1 cut(s) 1593
TfiI GAWTC 8 cut(s) 137, 388, 470, 912, 1321, 1716, 1841, 2648
TscAI CASTG 9 cut(s) 662, 1233, 1286, 1615, 1639, 1966, 2388, 2605, 2730
TseFI GTSAC 2 cut(s) 37, 2721
TseI GCWGC 1 cut(s) 1023
Tsp45I GTSAC 2 cut(s) 37, 2721
TspGWI ACGGA 3 cut(s) 434, 1203, 1421
TspRI CASTG 9 cut(s) 662, 1233, 1286, 1615, 1639, 1966, 2388, 2605, 2730
Vha464I CTTAAG 1 cut(s) 2642
VpaK11BI GGWCC 2 cut(s) 751, 2143
VspI ATTAAT 1 cut(s) 2412
XagI CCTNNNNNAGG 1 cut(s) 101
XapI RAATTY 3 cut(s) 766, 1807, 2112
XbaI TCTAGA 1 cut(s) 2345
XceI RCATGY 4 cut(s) 247, 1441, 1448, 1681
XmaJI CCTAGG 1 cut(s) 1970
XmiI GTMKAC 2 cut(s) 1179, 2480
XmnI GAANNNNTTC 3 cut(s) 650, 2217, 2401
XspI CTAG 4 cut(s) 1220, 1736, 1971, 2346
ZraI GACGTC 1 cut(s) 329
ZrmI AGTACT 2 cut(s) 430, 1784
Zsp2I ATGCAT 3 cut(s) 119, 1494, 2419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.