Prupe.8G010700_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000110
Physical Location & Seq
Reverse (-)
867399 .. 870950
3552 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G010700.1

Sequence Viewer

Length: 2850 bp
ATGGCATCAGCTGGCGTAGAACTTTTGATCGGCAAAATAGGTTCATTTCTTGAAAGCAGAGTGCCTCTGTTAGGAGGAGTTGGTGATGAACTTGAGCATCTCAGGAGTGAGTTGCTCACCATGAAAGCCTTCTTGGAAGATGCCGAAAGAAACGGAGCTCTCAGTGAAGTTGAGGAAACCTGGGTGGCAAATGTGAGGGACCTATCCATCGATGTTGAAGACATCATTGACGAGTTCAAATATCACGAAAATGAACAGAGAAGTTGGGATCCATACACAAGGGCCTTTCGTCAAACTATTTTCTTACCGTTGAACCTTTGGGAAAGGCATCGGATCACCACCAAATTGCAGAAGCTCATCATCAAAACAATCAGAGCCATTCCGGAAAGAAACCAACCTTATGGTGTTGATCGTATAGATGGCATGACTAATTCCCATGGTTACGATCCCAATCGAGTCGAAATCTTCGGTGAGTTATCTCTTTTCTTTAAAGATGATGAACTTGTCGGAATCGAAGATGCTAAAGAGAAGTTAGTTGGATGGTTGCTGTCTGGAGAGCCTCAAAGGACTGTAATTTCTGTGGTTGGTATGGGGGGTTCTGGCAAGACCACCTTAGTTGCAAACACCTTCAACACTCAAACTGCCAAGTTTGATTGCTATGCTTGGGTCACTGTCTCAAAAACTTACAACATTGAAGATCTTTTAAGGGTCTTGATAACAGAACTTTTTACATCAACAAGGGAAGATGTTCCTCAAGACTTGAGCAATATGAGCTACACACAAATGGTGGAAATTCTGGTCAACTATTTGCAGCCAAAGAGGTATGTGATTGTGCTAGACGATGTGTGGGATATTAATCTTTGGAGGCAAATACATGTAGCAGTTCCAGATGGAGCACATGGAAGCCGGATCATGCTCACAACTCGGAGAGAAGACATCGCTTCTTTCTCATTTGGGGCTGGATGTCATGTTCATCACGTTCAGCCTCTTAATGAGAATGAGGCTTGGGATCTCTTTTCCAGGAAAGCTTTCTCTAGCCGGCCTGATAATTGTTGCCCACCAGAGCTTGAACCCGTTGCTAGGGATCTTCTTGGAAAATGCCAAGGCTTACCTCTGGGAATAGTGGCTTTGGGCTCTCTCATGTCAACCAAAAGGCTTGCATCTGAGTGGACGGAATTTTACACTCGTTTGAGTTGTGAGCTAAGTAACAACCCGTTGCTTGAAGTAGTGAAGAGCATCTTGTTGCTAAGCTTCAATGACTTACCTTACCGACTCAAGCTATGCTTCCTGTATTTCGGCATTTTCCCAGAAGATTACGTGATTGAATGTGATAGGCTTGTTAGATTGTTGATGGCTGAGGGGTTTGTGGAACAAGTTGCAGGGGCTAAGCCAGAAGAGATTGCCGAAGGCTATGTAACGGAGCTCACTTGCCGATGCATGGTACAAGTTGTTAAGAGGGAACCATTTGGACGGGCAAAAGCGTTCAAGATGCATGACCTTTTACGAGAACTTGCTCTTTCAATTTCCAAAGTTGAGAACTTTTGTACCATCTATAATGAGCAAAAAACGAGGGATGATAGCAGAGCTCCCCATCGCTTATCAATGCAAGCAAACTATGGAGAACTACAGCCACACGGAGACATGTCAAAGGTTCGCACCTTCTTTATTTTTGCTCCTAAGATGACTGATTCTTCTTCATTTCAAAAATTGCCATCTGGTTTCAAACTGTTAGAGGTCTTGGATCTTAGACATGTCCCGATTGTTCAACTCCCAGATGAAACAGTGAAGTTTTTTAACTTGAAGTATTTAAACTTGAAAGGAACAAAGGTGAAAGAGCTTCCGAGGGACATAGGAAACCTTCATAATTTGGAAACCCTGGACATTAGGCATTCCAAAATTAGGTCACTTCCAGATGGGATTGTTAAGTTAAATAACTTACGACATCTTTTGATGTACCATTGCAATTTTGAAGATCTTTTTAGGTCTTATTATTTCTTTGATGGCACACAAGTACCACTTGACATATGTAAGCTAAAGAGCTTACAAGTTTTGGATGCTATCGAATTACGAGATGGGTTAACCAAAAAACTTGCACACTTGACCCAACTCACACGAATGAGCTTAACAAATGTGAGAGAGGCCGATGAGGAGGACTTGTGCAAGTCCATCGAAAGCATGAGACTCCTTGAACACTTGTTTGTCCATACAAGTACAGAGGATGAAGTGCTACACTTGGATGCATTGCCGTCAGCTCCTTCTGTACTCAACGCACTTGGTCTAATTGGAAAATTAGAGAGGGTTCCGCTTTGGTTTCATTCTCTTCAAAACCTTACAGCACTGAGATTGCATTGGTCAAGATTAACAGAAGATTTTCTTCCTCACATCAAAGCTCTGCCTAATTTGGCCATACTTCGGCTAAACAAGGCATACGTTGGAAATCAATTGGTCTTTCATACAGGATTCCCAAAGCTTGCTGAATTGTACCTAATGGATTTTCCTCAGTTGAATGTGATCGTCATAGATAGGGGGGCGATGCCTGCATTACAGACACTGGTAATTACTGAATGCATGGGGTTAAAGCAATTGCCTAAAGGAATCGAACACCTTACATGTCTCCAAAATTTGAGTTTTGTAAGTGTTCCTAATGAGCTTGTAGAGCGAATATGCGGAGAAGAAAGCTTGGATCATGCCAAGGTTGAGCACATCTCTGAAATCAGTTATCACTACAAAACTGAACTTGGATGGTTGGGGGAAAGACTGCGATCCTCTCTACAATGGGTTGTTCGACCCTCATCTTCTTCGGTCGACATTCTTACCCGGGATGGGCTACCTTTTTTACCAGGTAATTGA

Protein Analysis

950

Amino Acids

108.26

Weight (kDa)

5.78

Isoelectric Point (pI)

45.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 2805
AccIII TCCGGA 1 cut(s) 382
AciI CCGC 2 cut(s) 2303, 2667
AcoI YGGCCR 1 cut(s) 2403
AcsI RAATTY 3 cut(s) 792, 1175, 2620
AfaI GTAC 7 cut(s) 1443, 1546, 1955, 2013, 2212, 2262, 2483
AfiI CCNNNNNNNGG 6 cut(s) 71, 1080, 1438, 1899, 2412, 2823
AflIII ACRYGT 4 cut(s) 874, 1641, 1750, 2609
AjnI CCWGG 4 cut(s) 179, 1019, 1875, 2839
AjuI GAANNNNNNNTTGG 2 cut(s) 116, 148
AloI GAACNNNNNNTCC 2 cut(s) 954, 986
Alw21I GWGCWC 5 cut(s) 160, 898, 1425, 1588, 2703
Alw26I GTCTC 4 cut(s) 679, 1632, 2173, 2618
AlwNI CAGNNNCTG 1 cut(s) 2551
Ama87I CYCGRG 1 cut(s) 2817
Aor13HI TCCGGA 1 cut(s) 382
AoxI GGCC 4 cut(s) 282, 1040, 2139, 2403
ApeKI GCWGC 1 cut(s) 811
ApoI RAATTY 3 cut(s) 792, 1175, 2620
AseI ATTAAT 1 cut(s) 855
Asp700I GAANNNNTTC 4 cut(s) 128, 747, 1028, 2370
AspS9I GGNCC 2 cut(s) 199, 282
AsuC2I CCSGG 2 cut(s) 2818, 2819
AsuHPI GGTGA 5 cut(s) 95, 109, 328, 482, 1840
AvaI CYCGRG 1 cut(s) 2817
AvaII GGWCC 1 cut(s) 199
BaeI ACNNNNGTAYC 4 cut(s) 1528, 1561, 1995, 2028
BalI TGGCCA 1 cut(s) 2405
BamHI GGATCC 1 cut(s) 268
BanII GRGCYC 4 cut(s) 160, 1136, 1425, 1588
BbsI GAAGAC 2 cut(s) 225, 939
Bbv12I GWGCWC 5 cut(s) 160, 898, 1425, 1588, 2703
BbvCI CCTCAGC 1 cut(s) 1356
BbvI GCAGC 1 cut(s) 823
BceAI ACGGC 1 cut(s) 2230
BcgI CGANNNNNNTGC 2 cut(s) 2149, 2183
BciT130I CCWGG 4 cut(s) 181, 1021, 1877, 2841
BcnI CCSGG 2 cut(s) 2818, 2819
BcoDI GTCTC 4 cut(s) 679, 1632, 2173, 2618
BfaI CTAG 3 cut(s) 836, 1035, 1080
BfmI CTRYAG 1 cut(s) 1625
BglII AGATCT 2 cut(s) 697, 1972
BisI GCNGC 1 cut(s) 812
BlpI GCTNAGC 2 cut(s) 1247, 1386
BlsI GCNGC 1 cut(s) 813
Bme1390I CCNGG 6 cut(s) 181, 1021, 1877, 2818, 2819, 2841
Bme18I GGWCC 1 cut(s) 199
BmeT110I CYCGRG 1 cut(s) 2817
BmgT120I GGNCC 2 cut(s) 199, 282
BmiI GGNNCC 4 cut(s) 200, 270, 1461, 2301
BmrFI CCNGG 6 cut(s) 181, 1021, 1877, 2818, 2819, 2841
BpiI GAAGAC 2 cut(s) 225, 939
BplI GAGNNNNNCTC 2 cut(s) 2690, 2722
BpmI CTGGAG 1 cut(s) 573
Bpu10I CCTNAGC 1 cut(s) 1356
Bpu1102I GCTNAGC 2 cut(s) 1247, 1386
BpuEI CTTGAG 4 cut(s) 113, 738, 781, 1259
BpuMI CCSGG 2 cut(s) 2818, 2819
Bsa29I ATCGAT 1 cut(s) 210
BsaAI YACGTR 1 cut(s) 1318
BsaBI GATNNNNATC 2 cut(s) 450, 855
BsaJI CCNNGG 7 cut(s) 180, 436, 1102, 1841, 1875, 2691, 2817
BsaWI WCCGGW 1 cut(s) 382
BsaXI ACNNNNNCTCC 2 cut(s) 2141, 2171
Bsc4I CCNNNNNNNGG 6 cut(s) 71, 1080, 1438, 1899, 2412, 2823
Bse118I RCCGGY 1 cut(s) 1038
Bse1I ACTGG 1 cut(s) 2556
Bse3DI GCAATG 2 cut(s) 1957, 2240
Bse8I GATNNNNATC 2 cut(s) 450, 855
BseAI TCCGGA 1 cut(s) 382
BseBI CCWGG 4 cut(s) 181, 1021, 1877, 2841
BseCI ATCGAT 1 cut(s) 210
BseDI CCNNGG 7 cut(s) 180, 436, 1102, 1841, 1875, 2691, 2817
BseGI GGATG 8 cut(s) 545, 968, 1579, 2059, 2224, 2242, 2747, 2827
BseJI GATNNNNATC 2 cut(s) 450, 855
BseLI CCNNNNNNNGG 6 cut(s) 71, 1080, 1438, 1899, 2412, 2823
BseMI GCAATG 2 cut(s) 1957, 2240
BseMII CTCAG 6 cut(s) 115, 175, 1155, 1347, 2330, 2513
BseNI ACTGG 1 cut(s) 2556
BseRI GAGGAG 2 cut(s) 90, 2162
BseXI GCAGC 1 cut(s) 823
Bsh1285I CGRYCG 1 cut(s) 2805
BshFI GGCC 4 cut(s) 284, 1042, 2141, 2405
BshVI ATCGAT 1 cut(s) 210
BsiEI CGRYCG 1 cut(s) 2805
BsiHKAI GWGCWC 5 cut(s) 160, 898, 1425, 1588, 2703
BsiHKCI CYCGRG 1 cut(s) 2817
BsiSI CCGG 4 cut(s) 383, 907, 1039, 2818
BslFI GGGAC 3 cut(s) 212, 1739, 1859
BslI CCNNNNNNNGG 6 cut(s) 71, 1080, 1438, 1899, 2412, 2823
BsmAI GTCTC 4 cut(s) 679, 1632, 2173, 2618
BsmFI GGGAC 3 cut(s) 212, 1739, 1859
BsmI GAATGC 2 cut(s) 1888, 2570
BsnI GGCC 4 cut(s) 284, 1042, 2141, 2405
BsoBI CYCGRG 1 cut(s) 2817
Bsp1286I GDGCHC 6 cut(s) 160, 898, 1136, 1425, 1588, 2703
Bsp13I TCCGGA 1 cut(s) 382
Bsp1720I GCTNAGC 2 cut(s) 1247, 1386
Bsp19I CCATGG 1 cut(s) 436
BspACI CCGC 2 cut(s) 2303, 2667
BspANI GGCC 4 cut(s) 284, 1042, 2141, 2405
BspCNI CTCAG 6 cut(s) 114, 174, 1156, 1348, 2331, 2512
BspDI ATCGAT 1 cut(s) 210
BspEI TCCGGA 1 cut(s) 382
BspLI GGNNCC 4 cut(s) 200, 270, 1461, 2301
BspQI GCTCTTC 1 cut(s) 1226
BsrDI GCAATG 2 cut(s) 1957, 2240
BsrFI RCCGGY 1 cut(s) 1038
BsrI ACTGG 1 cut(s) 2556
BssAI RCCGGY 1 cut(s) 1038
BssECI CCNNGG 7 cut(s) 180, 436, 1102, 1841, 1875, 2691, 2817
BssT1I CCWWGG 3 cut(s) 436, 1102, 2691
Bst2UI CCWGG 4 cut(s) 181, 1021, 1877, 2841
Bst4CI ACNGT 5 cut(s) 309, 571, 673, 1728, 1783
Bst6I CTCTTC 3 cut(s) 1226, 1389, 2325
BstBAI YACGTR 1 cut(s) 1318
BstC8I GCNNGC 6 cut(s) 13, 1040, 1158, 1608, 2472, 2538
BstDSI CCRYGG 1 cut(s) 436
BstENI CCTNNNNNAGG 1 cut(s) 69
BstF5I GGATG 8 cut(s) 545, 968, 1579, 2059, 2224, 2242, 2747, 2827
BstMAI GTCTC 4 cut(s) 679, 1632, 2173, 2618
BstMCI CGRYCG 1 cut(s) 2805
BstMWI GCNNNNNNNGC 3 cut(s) 771, 2537, 2656
BstNI CCWGG 4 cut(s) 181, 1021, 1877, 2841
BstNSI RCATGY 4 cut(s) 878, 1645, 1754, 2613
BstSCI CCNGG 6 cut(s) 179, 1019, 1875, 2816, 2817, 2839
BstSFI CTRYAG 1 cut(s) 1625
BstV1I GCAGC 1 cut(s) 823
BstV2I GAAGAC 2 cut(s) 225, 939
BstX2I RGATCY 6 cut(s) 268, 697, 1009, 1084, 1741, 1972
BstXI CCANNNNNNTGG 1 cut(s) 401
BstYI RGATCY 6 cut(s) 268, 697, 1009, 1084, 1741, 1972
Bsu15I ATCGAT 1 cut(s) 210
BsuRI GGCC 4 cut(s) 284, 1042, 2141, 2405
BsuTUI ATCGAT 1 cut(s) 210
BtgI CCRYGG 1 cut(s) 436
BtgZI GCGATG 3 cut(s) 922, 1577, 2546
BtsCI GGATG 8 cut(s) 545, 968, 1579, 2059, 2224, 2242, 2747, 2827
BtsIMutI CAGTG 5 cut(s) 169, 669, 1788, 2336, 2549
Cac8I GCNNGC 6 cut(s) 13, 1040, 1158, 1608, 2472, 2538
CaiI CAGNNNCTG 1 cut(s) 2551
Cfr10I RCCGGY 1 cut(s) 1038
Cfr13I GGNCC 2 cut(s) 199, 282
Cfr9I CCCGGG 1 cut(s) 2817
ClaI ATCGAT 1 cut(s) 210
CsiI ACCWGGT 1 cut(s) 2839
Csp6I GTAC 7 cut(s) 1442, 1545, 1954, 2012, 2211, 2261, 2482
CspCI CAANNNNNGTGG 2 cut(s) 598, 633
CviQI GTAC 7 cut(s) 1442, 1545, 1954, 2012, 2211, 2261, 2482
DraI TTTAAA 2 cut(s) 490, 1809
EaeI YGGCCR 1 cut(s) 2403
Eam1104I CTCTTC 3 cut(s) 1226, 1389, 2325
EarI CTCTTC 3 cut(s) 1226, 1389, 2325
Ecl136II GAGCTC 3 cut(s) 158, 1423, 1586
Eco130I CCWWGG 3 cut(s) 436, 1102, 2691
Eco24I GRGCYC 4 cut(s) 160, 1136, 1425, 1588
Eco47I GGWCC 1 cut(s) 199
Eco53kI GAGCTC 3 cut(s) 158, 1423, 1586
Eco88I CYCGRG 1 cut(s) 2817
EcoICRI GAGCTC 3 cut(s) 158, 1423, 1586
EcoNI CCTNNNNNAGG 1 cut(s) 69
EcoO109I RGGNCCY 2 cut(s) 199, 282
EcoRII CCWGG 4 cut(s) 179, 1019, 1875, 2839
EcoT14I CCWWGG 3 cut(s) 436, 1102, 2691
EcoT22I ATGCAT 4 cut(s) 1439, 1494, 2242, 2570
EcoT38I GRGCYC 4 cut(s) 160, 1136, 1425, 1588
ErhI CCWWGG 3 cut(s) 436, 1102, 2691
FaqI GGGAC 3 cut(s) 212, 1739, 1859
FauNDI CATATG 1 cut(s) 2024
FblI GTMKAC 1 cut(s) 2805
Fnu4HI GCNGC 1 cut(s) 812
FokI GGATG 8 cut(s) 552, 975, 1586, 2066, 2231, 2249, 2754, 2834
FriOI GRGCYC 4 cut(s) 160, 1136, 1425, 1588
Fsp4HI GCNGC 1 cut(s) 812
FspBI CTAG 3 cut(s) 836, 1035, 1080
GluI GCNGC 1 cut(s) 812
GsuI CTGGAG 1 cut(s) 573
HaeIII GGCC 4 cut(s) 284, 1042, 2141, 2405
HapII CCGG 4 cut(s) 383, 907, 1039, 2818
HincII GTYRAC 4 cut(s) 802, 1146, 2079, 2806
HindII GTYRAC 4 cut(s) 802, 1146, 2079, 2806
HindIII AAGCTT 4 cut(s) 1026, 1249, 2468, 2677
HinfI GANTC 7 cut(s) 456, 510, 1272, 1688, 2181, 2460, 2595
HpaI GTTAAC 1 cut(s) 2079
HpaII CCGG 4 cut(s) 383, 907, 1039, 2818
HphI GGTGA 5 cut(s) 95, 109, 328, 482, 1840
Hpy166II GTNNAC 5 cut(s) 802, 1146, 1170, 2079, 2806
Hpy188I TCNGA 7 cut(s) 333, 374, 509, 927, 1165, 1842, 2710
Hpy8I GTNNAC 5 cut(s) 802, 1146, 1170, 2079, 2806
HpyAV CCTTC 6 cut(s) 139, 637, 1400, 1669, 1868, 2265
HpyCH4III ACNGT 5 cut(s) 309, 571, 673, 1728, 1783
HpyCH4IV ACGT 3 cut(s) 978, 1317, 2430
HpyF10VI GCNNNNNNNGC 3 cut(s) 771, 2537, 2656
HpySE526I ACGT 3 cut(s) 978, 1317, 2430
Kpn2I TCCGGA 1 cut(s) 382
KroI GCCGGC 1 cut(s) 1038
KroNI GCCGGC 1 cut(s) 1040
KspAI GTTAAC 1 cut(s) 2079
LguI GCTCTTC 1 cut(s) 1226
LmnI GCTCC 6 cut(s) 155, 893, 1420, 1591, 1678, 2257
Lsp1109I GCAGC 1 cut(s) 823
MabI ACCWGGT 1 cut(s) 2839
MaeI CTAG 3 cut(s) 836, 1035, 1080
MaeII ACGT 3 cut(s) 978, 1317, 2430
MaeIII GTNAC 5 cut(s) 440, 667, 1205, 1414, 1902
MfeI CAATTG 2 cut(s) 2441, 2582
MflI RGATCY 6 cut(s) 268, 697, 1009, 1084, 1741, 1972
MhlI GDGCHC 6 cut(s) 160, 898, 1136, 1425, 1588, 2703
MlsI TGGCCA 1 cut(s) 2405
MluNI TGGCCA 1 cut(s) 2405
MlyI GAGTC 3 cut(s) 465, 1266, 2175
MmeI TCCRAC 3 cut(s) 487, 517, 2413
Mox20I TGGCCA 1 cut(s) 2405
Mph1103I ATGCAT 4 cut(s) 1439, 1494, 2242, 2570
MroI TCCGGA 1 cut(s) 382
MroNI GCCGGC 1 cut(s) 1038
MroXI GAANNNNTTC 4 cut(s) 128, 747, 1028, 2370
MscI TGGCCA 1 cut(s) 2405
MslI CAYNNNNRTG 5 cut(s) 249, 782, 1165, 2114, 2235
Msp20I TGGCCA 1 cut(s) 2405
MspA1I CMGCKG 1 cut(s) 11
MspI CCGG 4 cut(s) 383, 907, 1039, 2818
MspR9I CCNGG 6 cut(s) 181, 1021, 1877, 2818, 2819, 2841
MunI CAATTG 2 cut(s) 2441, 2582
Mva1269I GAATGC 2 cut(s) 1888, 2570
MvaI CCWGG 4 cut(s) 181, 1021, 1877, 2841
MwoI GCNNNNNNNGC 3 cut(s) 771, 2537, 2656
NaeI GCCGGC 1 cut(s) 1040
NciI CCSGG 2 cut(s) 2818, 2819
NcoI CCATGG 1 cut(s) 436
NdeI CATATG 1 cut(s) 2024
NgoMIV GCCGGC 1 cut(s) 1038
NlaIV GGNNCC 4 cut(s) 200, 270, 1461, 2301
NmuCI GTSAC 2 cut(s) 667, 1902
NsiI ATGCAT 4 cut(s) 1439, 1494, 2242, 2570
NspI RCATGY 4 cut(s) 878, 1645, 1754, 2613
PciI ACATGT 4 cut(s) 874, 1641, 1750, 2609
PciSI GCTCTTC 1 cut(s) 1226
PctI GAATGC 2 cut(s) 1888, 2570
PdiI GCCGGC 1 cut(s) 1040
PdmI GAANNNNTTC 4 cut(s) 128, 747, 1028, 2370
PfeI GAWTC 4 cut(s) 510, 1688, 2460, 2595
PfoI TCCNGGA 1 cut(s) 1019
PkrI GCNGC 1 cut(s) 813
PleI GAGTC 3 cut(s) 464, 1266, 2175
PpsI GAGTC 3 cut(s) 464, 1266, 2175
Ppu21I YACGTR 1 cut(s) 1318
PpuMI RGGWCCY 1 cut(s) 199
PscI ACATGT 4 cut(s) 874, 1641, 1750, 2609
PshBI ATTAAT 1 cut(s) 855
Psp124BI GAGCTC 3 cut(s) 160, 1425, 1588
Psp5II RGGWCCY 1 cut(s) 199
Psp6I CCWGG 4 cut(s) 179, 1019, 1875, 2839
PspGI CCWGG 4 cut(s) 179, 1019, 1875, 2839
PspN4I GGNNCC 4 cut(s) 200, 270, 1461, 2301
PspPI GGNCC 2 cut(s) 199, 282
PspPPI RGGWCCY 1 cut(s) 199
PsrI GAACNNNNNNTAC 2 cut(s) 580, 612
PstNI CAGNNNCTG 1 cut(s) 2551
PsuI RGATCY 6 cut(s) 268, 697, 1009, 1084, 1741, 1972
PvuII CAGCTG 1 cut(s) 11
RsaI GTAC 7 cut(s) 1443, 1546, 1955, 2013, 2212, 2262, 2483
RsaNI GTAC 7 cut(s) 1442, 1545, 1954, 2012, 2211, 2261, 2482
RseI CAYNNNNRTG 5 cut(s) 249, 782, 1165, 2114, 2235
SacI GAGCTC 3 cut(s) 160, 1425, 1588
SalI GTCGAC 1 cut(s) 2804
SapI GCTCTTC 1 cut(s) 1226
SatI GCNGC 1 cut(s) 812
Sau96I GGNCC 2 cut(s) 199, 282
SchI GAGTC 3 cut(s) 465, 1266, 2175
ScrFI CCNGG 6 cut(s) 181, 1021, 1877, 2818, 2819, 2841
SduI GDGCHC 6 cut(s) 160, 898, 1136, 1425, 1588, 2703
SexAI ACCWGGT 1 cut(s) 2839
SfcI CTRYAG 1 cut(s) 1625
SinI GGWCC 1 cut(s) 199
SmaI CCCGGG 1 cut(s) 2819
SmiMI CAYNNNNRTG 5 cut(s) 249, 782, 1165, 2114, 2235
SmlI CTYRAG 4 cut(s) 92, 753, 760, 1274
SmoI CTYRAG 4 cut(s) 92, 753, 760, 1274
SsiI CCGC 2 cut(s) 2303, 2667
SspMI CTAG 3 cut(s) 836, 1035, 1080
SstI GAGCTC 3 cut(s) 160, 1425, 1588
StyD4I CCNGG 6 cut(s) 179, 1019, 1875, 2816, 2817, 2839
StyI CCWWGG 3 cut(s) 436, 1102, 2691
TaaI ACNGT 5 cut(s) 309, 571, 673, 1728, 1783
TaiI ACGT 3 cut(s) 981, 1320, 2433
TaqI TCGA 9 cut(s) 210, 454, 459, 513, 2061, 2169, 2598, 2785, 2805
TaqII GACCGA 1 cut(s) 2791
TatI WGTACW 2 cut(s) 2210, 2260
TfiI GAWTC 4 cut(s) 510, 1688, 2460, 2595
TscAI CASTG 5 cut(s) 169, 676, 1788, 2343, 2556
TseFI GTSAC 2 cut(s) 667, 1902
TseI GCWGC 1 cut(s) 811
Tsp45I GTSAC 2 cut(s) 667, 1902
TspGWI ACGGA 4 cut(s) 168, 1187, 1433, 1650
TspMI CCCGGG 1 cut(s) 2817
TspRI CASTG 5 cut(s) 169, 676, 1788, 2343, 2556
VpaK11BI GGWCC 1 cut(s) 199
VspI ATTAAT 1 cut(s) 855
XagI CCTNNNNNAGG 1 cut(s) 69
XapI RAATTY 3 cut(s) 792, 1175, 2620
XceI RCATGY 4 cut(s) 878, 1645, 1754, 2613
XmaI CCCGGG 1 cut(s) 2817
XmiI GTMKAC 1 cut(s) 2805
XmnI GAANNNNTTC 4 cut(s) 128, 747, 1028, 2370
XspI CTAG 3 cut(s) 836, 1035, 1080
Zsp2I ATGCAT 4 cut(s) 1439, 1494, 2242, 2570
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.