Prupe.6G146400_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000110
Physical Location & Seq
Reverse (-)
12122566 .. 12124470
1905 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G146400.1

Sequence Viewer

Length: 1503 bp
ATGGCGTTAGTTGCCACAGACCTCTTCATTGGCAAATTTGTAAGCATTCTTGAGAGCGAAGCAGCATCCATAGCGGGCGTTCGTGATCAAGTTGATGAGATTAAGCGGGAGTTGGTGATCATGAAATCCTTCTTGGAGGATGCTGACGGCGGCAAGAAAGCACACACAGAAGTGGAGAAAGCGTGGGTCGCAAGCATTCGAGACTTGGCCAATGATGTCGAAAACATCATCGATGAATTCATGCATCACATGTACAAGCAACAAAGGGGCGGTCGATGTCCAAAGTGGCTCCTCAAAACCATTCACTTTCCAAAGAACCTTTGGTATATGGGTCAAATAGCCAAGAAGTTACATAAAATTGCCGGAAAGATTAGAGCTATTCCAGAGAGAAATGAGAGATATGGTGGTGCTGCAGCAGTAGAAGGAAAAAGTACTTCTGAGGATATTCGCAGACGGGTGCAGAACCAAGCGGAGTCTTCTCTTTACCATAAGGAGAATGAACTTCAACACCAAACTGTTGTCTCCGTGGTAGGGATGGGAGGATCAGGGAAGACAACTCTAGTTGCAAGGACTTTCACCAACGAGGTTGTCAAGAAACATTTCAAATGTTACGCTTGGATTACTGTTTCCCAATCTTATGTGATTGAAGACTTACTTAGAAGATTGATCAAAGAATTCCACAAAGCAAGGAGGGAAGAGGTCTCTGCAGACATGAATGCCATGTGCTATATTGAATTGGTTGAGATTTTGGTTAACTACTTGGAGACTAAAAGGTACCTTGCTGTATTGGATGACGTGTGGGATATCCTTCTTTGGGAAAGAATAAGGCTTTCATTTCCAGATAAACAACTTGGAAGTCGAGTCATGCTTACAACTCGAAGAGAGGACATAGGATCGTACTCTTTTGGAGTTGAAAGCCATGTTCACAAGATTCAACCGCTGGAAAGGAGAGATGCTTGGGAGCTCTTCAGCATGAAAGCCTTCTCAAGTTATCATAACAAATCTTGTTCACCGGAACTTCTGCCATTAGCTCGGAAACTTGTGGAAAAGTGTGAAGGTCTGCCTCTTGCAGCCTTAAGTGGTCTCATGTCTTCTAAGAAGTCACTTACTGATTGGAGCAAAGTCTACAATAGCTTAAATTGGCATCTAACAAACAATTCTTTGAAGAAGTTGCAAACAGCTATGTTATGGAACTCATTTTTCGTAACATGCTACAGGAAAGGTATCGAGAATGCCAACAAGCATGAGCTTCCAGAATCCATAAGACGGCTCCGCAACCTTCAGACCTTGGACCTCTTGAAGACAGATATAGAGGCACTTCCAATAGGGATTTCCAAGTTGATAAACCTGCGCCATCTTGTTATGTGCCATTCCAAAAGTGGTTCAAAATATAAATTATACATTGAAGTTCTGTTTGTTAATTACAATACTTTTGTCTTTTTAAATATTTTTCAGAAACAAGTCCAGCAATTGAAGATTCTACCCGGTTTGGAGTTGGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

501

Amino Acids

57.64

Weight (kDa)

9.23

Isoelectric Point (pI)

50.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1356
Acc65I GGTACC 1 cut(s) 774
AccB1I GGYRCC 1 cut(s) 774
AccI GTMKAC 1 cut(s) 1125
AciI CCGC 7 cut(s) 74, 106, 150, 270, 470, 938, 1273
AclWI GGATC 2 cut(s) 550, 901
AcoI YGGCCR 1 cut(s) 207
AcsI RAATTY 3 cut(s) 35, 236, 674
AcuI CTGAAG 2 cut(s) 952, 1265
AfaI GTAC 4 cut(s) 254, 433, 776, 899
AfiI CCNNNNNNNGG 3 cut(s) 531, 814, 1266
AflII CTTAAG 1 cut(s) 1075
AflIII ACRYGT 2 cut(s) 249, 795
AjiI CACGTC 1 cut(s) 796
AjuI GAANNNNNNNTTGG 4 cut(s) 116, 148, 1315, 1347
AleI CACNNNNGTG 1 cut(s) 170
AluBI AGCT 6 cut(s) 377, 964, 1031, 1134, 1181, 1249
AluI AGCT 6 cut(s) 377, 964, 1031, 1134, 1181, 1249
Alw21I GWGCWC 1 cut(s) 966
Alw26I GTCTC 5 cut(s) 195, 526, 706, 758, 1088
AlwI GGATC 2 cut(s) 550, 901
AoxI GGCC 1 cut(s) 207
ApeKI GCWGC 4 cut(s) 62, 410, 413, 1070
ApoI RAATTY 3 cut(s) 35, 236, 674
ArsI GACNNNNNNTTYG 2 cut(s) 256, 288
Asp700I GAANNNNTTC 3 cut(s) 128, 599, 980
Asp718I GGTACC 1 cut(s) 774
AspLEI GCGC 1 cut(s) 1353
AspS9I GGNCC 1 cut(s) 1291
AsuC2I CCSGG 1 cut(s) 1485
AsuHPI GGTGA 3 cut(s) 127, 568, 1002
AvaII GGWCC 1 cut(s) 1291
BalI TGGCCA 1 cut(s) 209
BanI GGYRCC 1 cut(s) 774
BanII GRGCYC 1 cut(s) 966
BbsI GAAGAC 5 cut(s) 468, 557, 654, 1083, 1307
Bbv12I GWGCWC 1 cut(s) 966
BbvI GCAGC 4 cut(s) 74, 397, 425, 1082
BccI CCATC 2 cut(s) 529, 1362
BceAI ACGGC 2 cut(s) 163, 1283
BclI TGATCA 3 cut(s) 85, 117, 666
BcnI CCSGG 1 cut(s) 1485
BcoDI GTCTC 5 cut(s) 195, 526, 706, 758, 1088
BfaI CTAG 1 cut(s) 560
BfmI CTRYAG 3 cut(s) 411, 705, 1213
BfrI CTTAAG 1 cut(s) 1075
BfuAI ACCTGC 1 cut(s) 1356
BisI GCNGC 5 cut(s) 63, 151, 411, 414, 1071
BlsI GCNGC 5 cut(s) 64, 152, 412, 415, 1072
BmcAI AGTACT 1 cut(s) 433
Bme1390I CCNGG 1 cut(s) 1485
Bme18I GGWCC 1 cut(s) 1291
BmgBI CACGTC 1 cut(s) 796
BmgT120I GGNCC 1 cut(s) 1291
BmiI GGNNCC 3 cut(s) 290, 776, 1271
BmrFI CCNGG 1 cut(s) 1485
BmsI GCATC 5 cut(s) 74, 130, 253, 943, 1153
BpiI GAAGAC 5 cut(s) 468, 557, 654, 1083, 1307
BpuEI CTTGAG 2 cut(s) 71, 970
BpuMI CCSGG 1 cut(s) 1485
Bsa29I ATCGAT 1 cut(s) 231
BsaI GGTCTC 2 cut(s) 706, 1088
BsaJI CCNNGG 2 cut(s) 525, 1287
BsaWI WCCGGW 1 cut(s) 1012
BsaXI ACNNNNNCTCC 2 cut(s) 167, 197
Bsc4I CCNNNNNNNGG 3 cut(s) 531, 814, 1266
BseCI ATCGAT 1 cut(s) 231
BseDI CCNNGG 2 cut(s) 525, 1287
BseGI GGATG 4 cut(s) 65, 145, 540, 796
BseLI CCNNNNNNNGG 3 cut(s) 531, 814, 1266
BseMII CTCAG 1 cut(s) 429
BseRI GAGGAG 1 cut(s) 281
BseXI GCAGC 4 cut(s) 74, 397, 425, 1082
BsgI GTGCAG 1 cut(s) 479
Bsh1285I CGRYCG 1 cut(s) 274
BshFI GGCC 1 cut(s) 209
BshNI GGYRCC 1 cut(s) 774
BshVI ATCGAT 1 cut(s) 231
BsiEI CGRYCG 1 cut(s) 274
BsiHKAI GWGCWC 1 cut(s) 966
BsiSI CCGG 3 cut(s) 363, 1013, 1485
BslI CCNNNNNNNGG 3 cut(s) 531, 814, 1266
BsmAI GTCTC 5 cut(s) 195, 526, 706, 758, 1088
BsmI GAATGC 4 cut(s) 45, 195, 721, 1237
BsnI GGCC 1 cut(s) 209
Bso31I GGTCTC 2 cut(s) 706, 1088
Bsp1286I GDGCHC 1 cut(s) 966
Bsp1407I TGTACA 1 cut(s) 252
Bsp143I GATC 5 cut(s) 85, 117, 542, 666, 893
BspACI CCGC 7 cut(s) 74, 106, 150, 270, 470, 938, 1273
BspANI GGCC 1 cut(s) 209
BspCNI CTCAG 1 cut(s) 430
BspDI ATCGAT 1 cut(s) 231
BspHI TCATGA 1 cut(s) 120
BspLI GGNNCC 3 cut(s) 290, 776, 1271
BspMAI CTGCAG 2 cut(s) 415, 709
BspMI ACCTGC 1 cut(s) 1356
BspPI GGATC 2 cut(s) 550, 901
BspQI GCTCTTC 1 cut(s) 971
BspT107I GGYRCC 1 cut(s) 774
BspTI CTTAAG 1 cut(s) 1075
BspTNI GGTCTC 2 cut(s) 706, 1088
BsrGI TGTACA 1 cut(s) 252
BssECI CCNNGG 2 cut(s) 525, 1287
BssMI GATC 5 cut(s) 85, 117, 542, 666, 893
BssT1I CCWWGG 1 cut(s) 1287
Bst4CI ACNGT 2 cut(s) 517, 625
Bst6I CTCTTC 4 cut(s) 29, 690, 874, 971
BstAFI CTTAAG 1 cut(s) 1075
BstAUI TGTACA 1 cut(s) 252
BstC8I GCNNGC 2 cut(s) 76, 193
BstDEI CTNAG 3 cut(s) 438, 656, 1095
BstDSI CCRYGG 1 cut(s) 525
BstF5I GGATG 4 cut(s) 65, 145, 540, 796
BstHHI GCGC 1 cut(s) 1353
BstKTI GATC 5 cut(s) 88, 120, 545, 669, 896
BstMAI GTCTC 5 cut(s) 195, 526, 706, 758, 1088
BstMBI GATC 5 cut(s) 85, 117, 542, 666, 893
BstMCI CGRYCG 1 cut(s) 274
BstMWI GCNNNNNNNGC 3 cut(s) 11, 71, 188
BstNSI RCATGY 2 cut(s) 253, 1212
BstSCI CCNGG 1 cut(s) 1483
BstSFI CTRYAG 3 cut(s) 411, 705, 1213
BstV1I GCAGC 4 cut(s) 74, 397, 425, 1082
BstV2I GAAGAC 5 cut(s) 468, 557, 654, 1083, 1307
Bsu15I ATCGAT 1 cut(s) 231
BsuRI GGCC 1 cut(s) 209
BsuTUI ATCGAT 1 cut(s) 231
BtgI CCRYGG 1 cut(s) 525
BtrI CACGTC 1 cut(s) 796
BtsCI GGATG 4 cut(s) 65, 145, 540, 796
BveI ACCTGC 1 cut(s) 1356
Cac8I GCNNGC 2 cut(s) 76, 193
CciI TCATGA 1 cut(s) 120
CfoI GCGC 1 cut(s) 1353
Cfr13I GGNCC 1 cut(s) 1291
ClaI ATCGAT 1 cut(s) 231
Csp6I GTAC 4 cut(s) 253, 432, 775, 898
CviQI GTAC 4 cut(s) 253, 432, 775, 898
DdeI CTNAG 3 cut(s) 438, 656, 1095
DpnI GATC 5 cut(s) 87, 119, 544, 668, 895
DpnII GATC 5 cut(s) 85, 117, 542, 666, 893
DraI TTTAAA 1 cut(s) 1443
EaeI YGGCCR 1 cut(s) 207
Eam1104I CTCTTC 4 cut(s) 29, 690, 874, 971
EarI CTCTTC 4 cut(s) 29, 690, 874, 971
Ecl136II GAGCTC 1 cut(s) 964
Eco130I CCWWGG 1 cut(s) 1287
Eco24I GRGCYC 1 cut(s) 966
Eco31I GGTCTC 2 cut(s) 706, 1088
Eco32I GATATC 1 cut(s) 805
Eco47I GGWCC 1 cut(s) 1291
Eco53kI GAGCTC 1 cut(s) 964
Eco57I CTGAAG 2 cut(s) 952, 1265
EcoICRI GAGCTC 1 cut(s) 964
EcoRI GAATTC 2 cut(s) 236, 674
EcoRV GATATC 1 cut(s) 805
EcoT14I CCWWGG 1 cut(s) 1287
EcoT22I ATGCAT 1 cut(s) 246
EcoT38I GRGCYC 1 cut(s) 966
ErhI CCWWGG 1 cut(s) 1287
FalI AAGNNNNNCTT 2 cut(s) 639, 671
FauI CCCGC 2 cut(s) 67, 99
FbaI TGATCA 3 cut(s) 85, 117, 666
FblI GTMKAC 1 cut(s) 1125
Fnu4HI GCNGC 5 cut(s) 63, 151, 411, 414, 1071
FokI GGATG 4 cut(s) 52, 152, 547, 803
FriOI GRGCYC 1 cut(s) 966
Fsp4HI GCNGC 5 cut(s) 63, 151, 411, 414, 1071
FspBI CTAG 1 cut(s) 560
GlaI GCGC 1 cut(s) 1352
GluI GCNGC 5 cut(s) 63, 151, 411, 414, 1071
HaeIII GGCC 1 cut(s) 209
HapII CCGG 3 cut(s) 363, 1013, 1485
HhaI GCGC 1 cut(s) 1353
Hin6I GCGC 1 cut(s) 1351
HinP1I GCGC 1 cut(s) 1351
HincII GTYRAC 1 cut(s) 754
HindII GTYRAC 1 cut(s) 754
HinfI GANTC 5 cut(s) 473, 861, 931, 1256, 1477
HpaI GTTAAC 1 cut(s) 754
HpaII CCGG 3 cut(s) 363, 1013, 1485
HphI GGTGA 3 cut(s) 127, 568, 1002
Hpy166II GTNNAC 4 cut(s) 754, 925, 1010, 1126
Hpy188I TCNGA 4 cut(s) 439, 1035, 1284, 1455
Hpy8I GTNNAC 4 cut(s) 754, 925, 1010, 1126
HpyAV CCTTC 6 cut(s) 139, 416, 818, 991, 1049, 1289
HpyCH4III ACNGT 2 cut(s) 517, 625
HpyCH4IV ACGT 1 cut(s) 795
HpyCH4V TGCA 7 cut(s) 244, 413, 460, 566, 707, 1070, 1174
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 71, 188
HpyF3I CTNAG 3 cut(s) 438, 656, 1095
HpySE526I ACGT 1 cut(s) 795
HspAI GCGC 1 cut(s) 1351
KpnI GGTACC 1 cut(s) 778
Ksp22I TGATCA 3 cut(s) 85, 117, 666
KspAI GTTAAC 1 cut(s) 754
Kzo9I GATC 5 cut(s) 85, 117, 542, 666, 893
LguI GCTCTTC 1 cut(s) 971
LmnI GCTCC 4 cut(s) 294, 961, 1116, 1275
Lsp1109I GCAGC 4 cut(s) 74, 397, 425, 1082
LweI GCATC 5 cut(s) 74, 130, 253, 943, 1153
MaeI CTAG 1 cut(s) 560
MaeII ACGT 1 cut(s) 795
MaeIII GTNAC 4 cut(s) 348, 608, 1101, 1204
MalI GATC 5 cut(s) 87, 119, 544, 668, 895
MboI GATC 5 cut(s) 85, 117, 542, 666, 893
MfeI CAATTG 1 cut(s) 1469
MhlI GDGCHC 1 cut(s) 966
MlsI TGGCCA 1 cut(s) 209
MluNI TGGCCA 1 cut(s) 209
MlyI GAGTC 2 cut(s) 482, 870
MmeI TCCRAC 1 cut(s) 1476
Mox20I TGGCCA 1 cut(s) 209
Mph1103I ATGCAT 1 cut(s) 246
MroXI GAANNNNTTC 3 cut(s) 128, 599, 980
MscI TGGCCA 1 cut(s) 209
MseI TTAA 6 cut(s) 102, 753, 1076, 1136, 1419, 1442
MslI CAYNNNNRTG 1 cut(s) 170
Msp20I TGGCCA 1 cut(s) 209
MspA1I CMGCKG 1 cut(s) 940
MspCI CTTAAG 1 cut(s) 1075
MspI CCGG 3 cut(s) 363, 1013, 1485
MspR9I CCNGG 1 cut(s) 1485
MunI CAATTG 1 cut(s) 1469
Mva1269I GAATGC 4 cut(s) 45, 195, 721, 1237
MwoI GCNNNNNNNGC 3 cut(s) 11, 71, 188
NciI CCSGG 1 cut(s) 1485
NdeII GATC 5 cut(s) 85, 117, 542, 666, 893
NlaIV GGNNCC 3 cut(s) 290, 776, 1271
NmuCI GTSAC 1 cut(s) 1101
NsiI ATGCAT 1 cut(s) 246
NspI RCATGY 2 cut(s) 253, 1212
OliI CACNNNNGTG 1 cut(s) 170
PagI TCATGA 1 cut(s) 120
PciI ACATGT 1 cut(s) 249
PciSI GCTCTTC 1 cut(s) 971
PctI GAATGC 4 cut(s) 45, 195, 721, 1237
PdmI GAANNNNTTC 3 cut(s) 128, 599, 980
PfeI GAWTC 3 cut(s) 931, 1256, 1477
PkrI GCNGC 5 cut(s) 64, 152, 412, 415, 1072
PleI GAGTC 2 cut(s) 481, 869
PpsI GAGTC 2 cut(s) 481, 869
PscI ACATGT 1 cut(s) 249
Psp124BI GAGCTC 1 cut(s) 966
PspN4I GGNNCC 3 cut(s) 290, 776, 1271
PspPI GGNCC 1 cut(s) 1291
PstI CTGCAG 2 cut(s) 415, 709
RsaI GTAC 4 cut(s) 254, 433, 776, 899
RsaNI GTAC 4 cut(s) 253, 432, 775, 898
RseI CAYNNNNRTG 1 cut(s) 170
SacI GAGCTC 1 cut(s) 966
SapI GCTCTTC 1 cut(s) 971
SaqAI TTAA 6 cut(s) 102, 753, 1076, 1136, 1419, 1442
SatI GCNGC 5 cut(s) 63, 151, 411, 414, 1071
Sau3AI GATC 5 cut(s) 85, 117, 542, 666, 893
Sau96I GGNCC 1 cut(s) 1291
ScaI AGTACT 1 cut(s) 433
SchI GAGTC 2 cut(s) 482, 870
ScrFI CCNGG 1 cut(s) 1485
SduI GDGCHC 1 cut(s) 966
SfaNI GCATC 5 cut(s) 74, 130, 253, 943, 1153
SfcI CTRYAG 3 cut(s) 411, 705, 1213
SinI GGWCC 1 cut(s) 1291
SmiMI CAYNNNNRTG 1 cut(s) 170
SmlI CTYRAG 3 cut(s) 50, 985, 1075
SmoI CTYRAG 3 cut(s) 50, 985, 1075
SsiI CCGC 7 cut(s) 74, 106, 150, 270, 470, 938, 1273
SspI AATATT 1 cut(s) 1447
SspMI CTAG 1 cut(s) 560
SstI GAGCTC 1 cut(s) 966
StyD4I CCNGG 1 cut(s) 1483
StyI CCWWGG 1 cut(s) 1287
TaaI ACNGT 2 cut(s) 517, 625
TaiI ACGT 1 cut(s) 798
TaqI TCGA 7 cut(s) 199, 219, 231, 274, 859, 877, 1227
TatI WGTACW 2 cut(s) 252, 431
TauI GCSGC 1 cut(s) 153
TfiI GAWTC 3 cut(s) 931, 1256, 1477
Tru1I TTAA 6 cut(s) 102, 753, 1076, 1136, 1419, 1442
Tru9I TTAA 6 cut(s) 102, 753, 1076, 1136, 1419, 1442
TseFI GTSAC 1 cut(s) 1101
TseI GCWGC 4 cut(s) 62, 410, 413, 1070
Tsp45I GTSAC 1 cut(s) 1101
TspDTI ATGAA 8 cut(s) 16, 137, 229, 249, 513, 728, 822, 989
TspGWI ACGGA 1 cut(s) 514
Vha464I CTTAAG 1 cut(s) 1075
VpaK11BI GGWCC 1 cut(s) 1291
XapI RAATTY 3 cut(s) 35, 236, 674
XceI RCATGY 2 cut(s) 253, 1212
XcmI CCANNNNNNNNNTGG 2 cut(s) 318, 1376
XmiI GTMKAC 1 cut(s) 1125
XmnI GAANNNNTTC 3 cut(s) 128, 599, 980
XspI CTAG 1 cut(s) 560
ZrmI AGTACT 1 cut(s) 433
Zsp2I ATGCAT 1 cut(s) 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.