MD05G1008400.v1.1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000110
Physical Location & Seq
Forward (+)
1835116 .. 1836336
1221 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1008400.v1.1.491

Sequence Viewer

Length: 1221 bp
ATGCTGCATGTCGTTTGGAGGAATGAAACTGGAAGGCCAAAGGCATGTAAGATGCATGACCTTATGCGGGAGCTTGCTCTTTCTATATCAGAAAGAGAAAAATTTTGTGTTGTATATGATGGAAGAGAAGTAATGGAGGAAGTTCGAGCACGCCGCTTGTCAACTCAAACCACTGAAGGAAAAATTAAATTTTGCACTGGTATGTCACAACTTCGTTCTTTTCTTGTGTTTGTTACTGACACGGCCTCATTGTCATTCTCAAATACATTGCCTTCTGGATTCAAATTGTTGAGGGTTCTAGATTTGGAATATGTCCCAATTGATATACTGCCAAAAGAAGTTGTGTACTTGTTCAACCTAAGATATTTGAATTTAAGGGCAACTCCAATTAAAAAGCTCCCAGAATCCATAGGAAAGCTCCACAACCTTCAAACTTTGGATATCCGGAACACAAAGATAGAGGCACTTCCAAGTGGAATTTCAAAGTTGAAAAACTTGTGCCATCTAATCATGTACCGTTACACTAGAGAGCATAAGGGCTTCAGATACGTCAATGGGACAAGAGCACCAGCAAACATATGTACGTTCAAGAAATTGCAAGTCTTAACATGTGTTGAATTAGAAGGAAACATTGTTAGACTCGTGGGAAATATGACTCAACTTACCAGGATTGGGATTACCAATGTAAAAGAAAGAGACGAGAAGGACCTGTGTGCCTCAATTCAAAAGATGAAGCTCCTTCACTACTTGTTTTTAATGGCAAGTGATGAAGAAGAAGCTCTTCAAGTAAATGCCCTACGGTCACCTCCTCCCTACCTTCGAATGGTTATTTTGGTCGGCAGACTAAAAAAGGTACCACAGTGGTTTTTCTCACTTCAGAGCGTCACATATATGTATCTACATTGGTCTAGACCTGAGGAAGATTTACTACCTTACATTGAAGAATTGCCCAATCTCGGAAAGCTTACACTTATGAATGCATATGTTGGCAAAGAGTTGTGTTTCAGAAGCGGCTTTGAAAAGCTTACTCATTTGCAATTGTTTATCTTCCCCTTGTTGAATATGATAACAATAGCAAAAGGGGTGATGCCAAATCTCCAATCCTTGTCCCTTGATGACTGCACAGAATTAAACACATTGCCAGAAGGTCTTCAATACCTTACTAAACTAGAAACATTGAGACTGGAGCTTGTACCAGAGCAACTTGTAGATTCTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

407

Amino Acids

46.86

Weight (kDa)

8.98

Isoelectric Point (pI)

53.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 70 - 398 8.1e-47 Leucine-rich repeat region
LRR_4 PF12799 119 - 157 2.5e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 853
AccB1I GGYRCC 1 cut(s) 853
AccIII TCCGGA 1 cut(s) 444
AciI CCGC 3 cut(s) 67, 154, 1011
AcsI RAATTY 4 cut(s) 101, 188, 370, 477
AcuI CTGAAG 3 cut(s) 195, 526, 860
AfaI GTAC 5 cut(s) 347, 515, 583, 855, 1194
AfiI CCNNNNNNNGG 4 cut(s) 67, 672, 823, 956
AflIII ACRYGT 1 cut(s) 608
AjnI CCWGG 1 cut(s) 665
AjuI GAANNNNNNNTTGG 2 cut(s) 463, 495
AluBI AGCT 8 cut(s) 73, 397, 418, 736, 779, 964, 1024, 1189
AluI AGCT 8 cut(s) 73, 397, 418, 736, 779, 964, 1024, 1189
Alw21I GWGCWC 2 cut(s) 151, 568
Alw26I GTCTC 2 cut(s) 690, 1174
Aor13HI TCCGGA 1 cut(s) 444
AoxI GGCC 2 cut(s) 35, 243
ApeKI GCWGC 1 cut(s) 4
ApoI RAATTY 4 cut(s) 101, 188, 370, 477
Asp700I GAANNNNTTC 2 cut(s) 780, 1149
Asp718I GGTACC 1 cut(s) 853
AspS9I GGNCC 1 cut(s) 706
AsuHPI GGTGA 2 cut(s) 795, 1096
AsuII TTCGAA 1 cut(s) 820
AvaII GGWCC 1 cut(s) 706
AxyI CCTNAGG 1 cut(s) 915
BaeI ACNNNNGTAYC 2 cut(s) 845, 878
BanI GGYRCC 1 cut(s) 853
BarI GAAGNNNNNNTAC 2 cut(s) 912, 944
BauI CACGAG 1 cut(s) 641
BbsI GAAGAC 1 cut(s) 1142
Bbv12I GWGCWC 2 cut(s) 151, 568
BccI CCATC 2 cut(s) 113, 510
BceAI ACGGC 1 cut(s) 258
BciT130I CCWGG 1 cut(s) 667
BcoDI GTCTC 2 cut(s) 690, 1174
BfaI CTAG 4 cut(s) 299, 525, 909, 1169
BisI GCNGC 3 cut(s) 5, 154, 1012
BlsI GCNGC 3 cut(s) 6, 155, 1013
Bme1390I CCNGG 1 cut(s) 667
Bme18I GGWCC 1 cut(s) 706
BmgT120I GGNCC 1 cut(s) 706
BmiI GGNNCC 1 cut(s) 855
BmrFI CCNGG 1 cut(s) 667
BmsI GCATC 2 cut(s) 42, 1077
BpiI GAAGAC 1 cut(s) 1142
BpmI CTGGAG 1 cut(s) 1205
Bpu14I TTCGAA 1 cut(s) 820
BsaWI WCCGGW 1 cut(s) 444
Bsc4I CCNNNNNNNGG 4 cut(s) 67, 672, 823, 956
Bse1I ACTGG 3 cut(s) 34, 202, 1188
Bse21I CCTNAGG 1 cut(s) 915
Bse3DI GCAATG 2 cut(s) 266, 1136
BseAI TCCGGA 1 cut(s) 444
BseBI CCWGG 1 cut(s) 667
BseLI CCNNNNNNNGG 4 cut(s) 67, 672, 823, 956
BseMI GCAATG 2 cut(s) 266, 1136
BseMII CTCAG 1 cut(s) 906
BseNI ACTGG 3 cut(s) 34, 202, 1188
BseRI GAGGAG 1 cut(s) 798
BsgI GTGCAG 1 cut(s) 1105
BshFI GGCC 2 cut(s) 37, 245
BshNI GGYRCC 1 cut(s) 853
BsiHKAI GWGCWC 2 cut(s) 151, 568
BsiSI CCGG 1 cut(s) 445
BslFI GGGAC 3 cut(s) 299, 571, 1093
BslI CCNNNNNNNGG 4 cut(s) 67, 672, 823, 956
BsmAI GTCTC 2 cut(s) 690, 1174
BsmBI CGTCTC 1 cut(s) 690
BsmFI GGGAC 3 cut(s) 299, 571, 1093
BsmI GAATGC 1 cut(s) 982
BsnI GGCC 2 cut(s) 37, 245
Bsp119I TTCGAA 1 cut(s) 820
Bsp1286I GDGCHC 2 cut(s) 151, 568
Bsp13I TCCGGA 1 cut(s) 444
BspACI CCGC 3 cut(s) 67, 154, 1011
BspANI GGCC 2 cut(s) 37, 245
BspCNI CTCAG 1 cut(s) 907
BspEI TCCGGA 1 cut(s) 444
BspLI GGNNCC 1 cut(s) 855
BspQI GCTCTTC 1 cut(s) 786
BspT104I TTCGAA 1 cut(s) 820
BspT107I GGYRCC 1 cut(s) 853
BsrDI GCAATG 2 cut(s) 266, 1136
BsrI ACTGG 3 cut(s) 34, 202, 1188
BssSI CACGAG 1 cut(s) 641
Bst2BI CACGAG 1 cut(s) 641
Bst2UI CCWGG 1 cut(s) 667
Bst4CI ACNGT 3 cut(s) 518, 801, 861
Bst6I CTCTTC 2 cut(s) 118, 786
BstBI TTCGAA 1 cut(s) 820
BstC8I GCNNGC 2 cut(s) 75, 151
BstDEI CTNAG 2 cut(s) 359, 915
BstEII GGTNACC 1 cut(s) 801
BstMAI GTCTC 2 cut(s) 690, 1174
BstNI CCWGG 1 cut(s) 667
BstNSI RCATGY 3 cut(s) 11, 48, 612
BstPI GGTNACC 1 cut(s) 801
BstSCI CCNGG 1 cut(s) 665
BstV2I GAAGAC 1 cut(s) 1142
Bsu36I CCTNAGG 1 cut(s) 915
BsuRI GGCC 2 cut(s) 37, 245
BtsIMutI CAGTG 3 cut(s) 171, 195, 866
Cac8I GCNNGC 2 cut(s) 75, 151
Cfr13I GGNCC 1 cut(s) 706
CseI GACGC 1 cut(s) 871
Csp6I GTAC 5 cut(s) 346, 514, 582, 854, 1193
CviAII CATG 5 cut(s) 8, 45, 56, 511, 609
CviQI GTAC 5 cut(s) 346, 514, 582, 854, 1193
DdeI CTNAG 2 cut(s) 359, 915
Eam1104I CTCTTC 2 cut(s) 118, 786
EarI CTCTTC 2 cut(s) 118, 786
Eco32I GATATC 1 cut(s) 442
Eco47I GGWCC 1 cut(s) 706
Eco57I CTGAAG 3 cut(s) 195, 526, 860
Eco81I CCTNAGG 1 cut(s) 915
Eco91I GGTNACC 1 cut(s) 801
EcoO109I RGGNCCY 1 cut(s) 706
EcoO65I GGTNACC 1 cut(s) 801
EcoRII CCWGG 1 cut(s) 665
EcoRV GATATC 1 cut(s) 442
EcoT22I ATGCAT 2 cut(s) 57, 982
Esp3I CGTCTC 1 cut(s) 690
FaeI CATG 5 cut(s) 11, 48, 59, 514, 612
FalI AAGNNNNNCTT 2 cut(s) 765, 797
FaqI GGGAC 3 cut(s) 299, 571, 1093
FatI CATG 5 cut(s) 7, 44, 55, 510, 608
FauI CCCGC 1 cut(s) 60
FauNDI CATATG 2 cut(s) 578, 982
Fnu4HI GCNGC 3 cut(s) 5, 154, 1012
Fsp4HI GCNGC 3 cut(s) 5, 154, 1012
FspBI CTAG 4 cut(s) 299, 525, 909, 1169
GluI GCNGC 3 cut(s) 5, 154, 1012
GsuI CTGGAG 1 cut(s) 1205
HaeIII GGCC 2 cut(s) 37, 245
HapII CCGG 1 cut(s) 445
HgaI GACGC 1 cut(s) 871
Hin1II CATG 5 cut(s) 11, 48, 59, 514, 612
HincII GTYRAC 1 cut(s) 162
HindII GTYRAC 1 cut(s) 162
HindIII AAGCTT 2 cut(s) 962, 1022
HinfI GANTC 5 cut(s) 279, 404, 639, 655, 1211
HpaII CCGG 1 cut(s) 445
HphI GGTGA 2 cut(s) 795, 1096
Hpy166II GTNNAC 2 cut(s) 162, 346
Hpy188I TCNGA 5 cut(s) 91, 545, 879, 959, 1007
Hpy188III TCNNGA 5 cut(s) 276, 299, 445, 589, 909
Hpy8I GTNNAC 2 cut(s) 162, 346
HpyAV CCTTC 9 cut(s) 27, 170, 282, 437, 617, 697, 749, 827, 1139
HpyCH4III ACNGT 3 cut(s) 518, 801, 861
HpyCH4IV ACGT 2 cut(s) 549, 584
HpyCH4V TGCA 7 cut(s) 7, 55, 195, 598, 980, 1036, 1122
HpyF3I CTNAG 2 cut(s) 359, 915
HpySE526I ACGT 2 cut(s) 549, 584
Hsp92II CATG 5 cut(s) 11, 48, 59, 514, 612
Kpn2I TCCGGA 1 cut(s) 444
KpnI GGTACC 1 cut(s) 857
LguI GCTCTTC 1 cut(s) 786
LmnI GCTCC 5 cut(s) 70, 402, 423, 741, 1186
LweI GCATC 2 cut(s) 42, 1077
MaeI CTAG 4 cut(s) 299, 525, 909, 1169
MaeII ACGT 2 cut(s) 549, 584
MaeIII GTNAC 5 cut(s) 204, 232, 518, 801, 883
MboII GAAGA 8 cut(s) 135, 773, 782, 785, 932, 953, 1039, 1142
MfeI CAATTG 2 cut(s) 318, 1037
MhlI GDGCHC 2 cut(s) 151, 568
MlyI GAGTC 2 cut(s) 633, 649
MnlI CCTC 9 cut(s) 12, 130, 256, 285, 454, 727, 816, 819, 910
Mph1103I ATGCAT 2 cut(s) 57, 982
MroI TCCGGA 1 cut(s) 444
MroXI GAANNNNTTC 2 cut(s) 780, 1149
MseI TTAA 6 cut(s) 186, 374, 390, 605, 755, 1130
MslI CAYNNNNRTG 2 cut(s) 200, 890
MspI CCGG 1 cut(s) 445
MspR9I CCNGG 1 cut(s) 667
MunI CAATTG 2 cut(s) 318, 1037
Mva1269I GAATGC 1 cut(s) 982
MvaI CCWGG 1 cut(s) 667
NdeI CATATG 2 cut(s) 578, 982
NlaIII CATG 5 cut(s) 11, 48, 59, 514, 612
NlaIV GGNNCC 1 cut(s) 855
NmuCI GTSAC 3 cut(s) 204, 801, 883
NsiI ATGCAT 2 cut(s) 57, 982
NspI RCATGY 3 cut(s) 11, 48, 612
NspV TTCGAA 1 cut(s) 820
PciI ACATGT 1 cut(s) 608
PciSI GCTCTTC 1 cut(s) 786
PctI GAATGC 1 cut(s) 982
PdmI GAANNNNTTC 2 cut(s) 780, 1149
PfeI GAWTC 3 cut(s) 279, 404, 1211
PkrI GCNGC 3 cut(s) 6, 155, 1013
PleI GAGTC 2 cut(s) 633, 649
PpsI GAGTC 2 cut(s) 633, 649
PpuMI RGGWCCY 1 cut(s) 706
PscI ACATGT 1 cut(s) 608
Psp5II RGGWCCY 1 cut(s) 706
Psp6I CCWGG 1 cut(s) 665
PspEI GGTNACC 1 cut(s) 801
PspGI CCWGG 1 cut(s) 665
PspN4I GGNNCC 1 cut(s) 855
PspPI GGNCC 1 cut(s) 706
PspPPI RGGWCCY 1 cut(s) 706
RsaI GTAC 5 cut(s) 347, 515, 583, 855, 1194
RsaNI GTAC 5 cut(s) 346, 514, 582, 854, 1193
RseI CAYNNNNRTG 2 cut(s) 200, 890
SapI GCTCTTC 1 cut(s) 786
SaqAI TTAA 6 cut(s) 186, 374, 390, 605, 755, 1130
SatI GCNGC 3 cut(s) 5, 154, 1012
Sau96I GGNCC 1 cut(s) 706
SchI GAGTC 2 cut(s) 633, 649
ScrFI CCNGG 1 cut(s) 667
SduI GDGCHC 2 cut(s) 151, 568
SfaNI GCATC 2 cut(s) 42, 1077
SfuI TTCGAA 1 cut(s) 820
SinI GGWCC 1 cut(s) 706
SmiMI CAYNNNNRTG 2 cut(s) 200, 890
SsiI CCGC 3 cut(s) 67, 154, 1011
SspMI CTAG 4 cut(s) 299, 525, 909, 1169
StyD4I CCNGG 1 cut(s) 665
TaaI ACNGT 3 cut(s) 518, 801, 861
TaiI ACGT 2 cut(s) 552, 587
TaqI TCGA 2 cut(s) 145, 820
TatI WGTACW 1 cut(s) 345
TauI GCSGC 2 cut(s) 156, 1014
TfiI GAWTC 3 cut(s) 279, 404, 1211
Tru1I TTAA 6 cut(s) 186, 374, 390, 605, 755, 1130
Tru9I TTAA 6 cut(s) 186, 374, 390, 605, 755, 1130
TscAI CASTG 3 cut(s) 178, 202, 866
TseFI GTSAC 3 cut(s) 204, 801, 883
TseI GCWGC 1 cut(s) 4
Tsp45I GTSAC 3 cut(s) 204, 801, 883
TspDTI ATGAA 4 cut(s) 39, 746, 783, 989
TspRI CASTG 3 cut(s) 178, 202, 866
VpaK11BI GGWCC 1 cut(s) 706
XapI RAATTY 4 cut(s) 101, 188, 370, 477
XbaI TCTAGA 2 cut(s) 298, 908
XceI RCATGY 3 cut(s) 11, 48, 612
XmnI GAANNNNTTC 2 cut(s) 780, 1149
XspI CTAG 4 cut(s) 299, 525, 909, 1169
Zsp2I ATGCAT 2 cut(s) 57, 982
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.