FvH4_6g29690

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000110
Physical Location & Seq
Reverse (-)
22905848 .. 22908688
2841 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g29690.t1

Sequence Viewer

Length: 1620 bp
ATGGCGTCAGCTGCACAAGATCTCTTGCTCGGCAAAATTGTAGGCATTCTTGAGAAAGAAGCATCCTCCATAGCCGGTGTACGCGATAAAGTTGATGACATTAAACAAGAGCTTGTAAGCATGAAAGCTTTCCTAAAGGATGCTGATGGAATAAAAGCACAGACGGAGGGAGAGGAGGCATGGGTAACAAGCGTGAGAGACTCTGTCTATGACGTTGAAGATATCATTGCTGAATTCACATATCGCACCTATAAGCAGAAAAGTGAAGTTCGATTTGCAAGGTGTCTTCACCAAACATTTCATATTCCAAAGAATCTTTGGTATAGGCGTCAAATTGCTAAAAAGTTAGACAACATCAAAGGAACCATCAAAGCCATTTCAGAGAGGAATCAGAAATGGATCGGTCTAAGTGCTATTCCTGCTGTAGAAGGAACAAGTTCCTCTCATGATCATATTCAAAAATGGATGCGAGACCAAGCAGAGGCTTCTCTCTTTACTAACGAAGATGAGCTTGTCGGGATTGAAGCCCCCAAAAAAGCATTAATGGAACATATAGTGAATGGTCAGCAGAGCCAAACCATTGTCTCTGTGGTCGGGATGGGAGGATCTGGGAAAACCACTCTTGTTGCGAAGATCTTCAACAACGACATTGTGAAGAGACATTTCGACTGCTATGCATGGGTTGTAGTTTCTCAAAATTATGTAATTGAGGATTTATTTAGAAGCTTGATCAAGCAATTCCATGAAGCAAAGAAGGAGAAGATTCCAGGAGAGATTGATGGCATGAGCTATAGAGAATTGGTAGAGATTCTTGTTGACTACTTGAACTCAAAAAGGTATCTAGTTGTGTTGGACGACGTATGGGATATTAATGTTTGGGCACAAATTAGGGTTTTTAGCAAGAAGGCATTCTCGACTCATCCTAATAAATCTTGTCCTCCTGAACTTGAGCCAATTGCTCGGGAACTTGTGGGGAAGTGTAATGGCCTTCCTCTGGCAATTGTGGCAACGAAAGATTATTTAATGAAAAGAAAACGACTCATTAGATTGTGGATAGCCGAAGGATTTCTCGAACATGTAAGAGGTGTCACACCGGAAGTGACTGCAGATAGATATCTTTCGGAACTTTGTTATCGTAGCATGCTACAAGTTGTAGTGAGGAATGAAGAAGGAAGACCAAAAAAATGCAGGATGCATGATGTTATGCGTGAGATTGCTCTTTCAACATCCGAGAAAGAGAAGTTCGGTGCTGTGTATGATGGAAAAGATGAAGGAATTGAAGCCCGCCGTTTGTCAATTCAATCTGAAGGAGAAATAAAATCCAGTGCAGGTATGTCAAGGCTTCGCTCTATTCTTGTCTTTGTCGAAGAAACAACGTTGCCTTCTGATTGCAAATATTTGAGGGTGCTAGACTTGGAGAATGTGTCAATCACTAATCTGCCAGATCATCTTGGGTACTTGTTCAACTTAAGATACTTAAATTTGAGGGGAACTCGTATTAAAGAGCTTCCAAAATCCATAGCGAAGCTACGGAACCTTCAAACCTTGAACATCCGAGGAAGTGAGATTGAGGAACTTCCAAAAGGAATTGCCAAAATGTATCAAGTTCCAGGAGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

540

Amino Acids

61.28

Weight (kDa)

8.67

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 9 - 92 1.9e-19 Rx N-terminal domain
NB-ARC PF00931 175 - 299 2.9e-32 NB-ARC domain
WHD_DRP PF23559 338 - 406 2.5e-19 Disease resistance protein Winged helix domain
LRR_14 PF23598 448 - 535 5.8e-22 Leucine-rich repeat region
LRR_8 PF13855 466 - 521 2e-07 Leucine rich repeat
LRR_4 PF12799 489 - 527 3e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1319
AccII CGCG 1 cut(s) 84
AciI CCGC 1 cut(s) 1285
AclI AACGTT 1 cut(s) 1376
AclWI GGATC 2 cut(s) 407, 613
AcsI RAATTY 2 cut(s) 233, 1480
AcuI CTGAAG 1 cut(s) 1326
AcyI GRCGYC 2 cut(s) 5, 328
AfaI GTAC 2 cut(s) 81, 1457
AfiI CCNNNNNNNGG 2 cut(s) 481, 994
AflII CTTAAG 1 cut(s) 1468
AflIII ACRYGT 1 cut(s) 1075
AjnI CCWGG 2 cut(s) 766, 1609
AluBI AGCT 8 cut(s) 11, 112, 128, 511, 726, 789, 1507, 1528
AluI AGCT 8 cut(s) 11, 112, 128, 511, 726, 789, 1507, 1528
Alw26I GTCTC 4 cut(s) 192, 465, 589, 652
AlwI GGATC 2 cut(s) 407, 613
Ama87I CYCGRG 1 cut(s) 960
AoxI GGCC 1 cut(s) 985
ApeKI GCWGC 1 cut(s) 11
ApoI RAATTY 2 cut(s) 233, 1480
AseI ATTAAT 2 cut(s) 542, 870
Asp700I GAANNNNTTC 5 cut(s) 128, 436, 635, 908, 1065
AsuHPI GGTGA 1 cut(s) 281
AvaI CYCGRG 1 cut(s) 960
BaeGI GKGCMC 1 cut(s) 883
BbsI GAAGAC 2 cut(s) 278, 1180
BccI CCATC 5 cut(s) 140, 374, 592, 773, 1253
BceAI ACGGC 1 cut(s) 1272
BcgI CGANNNNNNTGC 2 cut(s) 656, 690
BciT130I CCWGG 2 cut(s) 768, 1611
BclI TGATCA 2 cut(s) 448, 729
BcoDI GTCTC 4 cut(s) 192, 465, 589, 652
BfaI CTAG 2 cut(s) 842, 1409
BfmI CTRYAG 3 cut(s) 423, 790, 1104
BfrI CTTAAG 1 cut(s) 1468
BfuAI ACCTGC 1 cut(s) 1319
BglII AGATCT 2 cut(s) 19, 633
BisI GCNGC 1 cut(s) 12
BlsI GCNGC 1 cut(s) 13
Bme1390I CCNGG 2 cut(s) 768, 1611
BmeT110I CYCGRG 1 cut(s) 960
BmiI GGNNCC 2 cut(s) 364, 1535
BmrFI CCNGG 2 cut(s) 768, 1611
BmsI GCATC 4 cut(s) 71, 130, 456, 1182
BpiI GAAGAC 2 cut(s) 278, 1180
BplI GAGNNNNNCTC 2 cut(s) 1477, 1509
BpuEI CTTGAG 2 cut(s) 71, 968
BsaBI GATNNNNATC 1 cut(s) 1113
BsaHI GRCGYC 2 cut(s) 5, 328
BsaI GGTCTC 1 cut(s) 465
BsaJI CCNNGG 1 cut(s) 1555
BsaWI WCCGGW 1 cut(s) 1093
BsaXI ACNNNNNCTCC 2 cut(s) 1409, 1439
Bsc4I CCNNNNNNNGG 2 cut(s) 481, 994
Bse118I RCCGGY 1 cut(s) 74
Bse1I ACTGG 1 cut(s) 1323
Bse3DI GCAATG 1 cut(s) 225
Bse8I GATNNNNATC 1 cut(s) 1113
BseBI CCWGG 2 cut(s) 768, 1611
BseDI CCNNGG 1 cut(s) 1555
BseGI GGATG 8 cut(s) 62, 145, 471, 603, 919, 1197, 1226, 1551
BseJI GATNNNNATC 1 cut(s) 1113
BseLI CCNNNNNNNGG 2 cut(s) 481, 994
BseMI GCAATG 1 cut(s) 225
BseNI ACTGG 1 cut(s) 1323
BseRI GAGGAG 1 cut(s) 188
BseSI GKGCMC 1 cut(s) 883
BsgI GTGCAG 1 cut(s) 1347
Bsh1236I CGCG 1 cut(s) 84
BshFI GGCC 1 cut(s) 987
BsiHKCI CYCGRG 1 cut(s) 960
BsiSI CCGG 2 cut(s) 75, 1094
BslI CCNNNNNNNGG 2 cut(s) 481, 994
BsmAI GTCTC 4 cut(s) 192, 465, 589, 652
BsmI GAATGC 2 cut(s) 45, 908
BsnI GGCC 1 cut(s) 987
Bso31I GGTCTC 1 cut(s) 465
BsoBI CYCGRG 1 cut(s) 960
Bsp1286I GDGCHC 1 cut(s) 883
Bsp143I GATC 7 cut(s) 19, 399, 448, 605, 633, 729, 1444
BspACI CCGC 1 cut(s) 1285
BspANI GGCC 1 cut(s) 987
BspFNI CGCG 1 cut(s) 84
BspHI TCATGA 1 cut(s) 445
BspLI GGNNCC 2 cut(s) 364, 1535
BspMAI CTGCAG 1 cut(s) 1108
BspMI ACCTGC 1 cut(s) 1319
BspPI GGATC 2 cut(s) 407, 613
BspTI CTTAAG 1 cut(s) 1468
BspTNI GGTCTC 1 cut(s) 465
BsrDI GCAATG 1 cut(s) 225
BsrFI RCCGGY 1 cut(s) 74
BsrI ACTGG 1 cut(s) 1323
BssAI RCCGGY 1 cut(s) 74
BssECI CCNNGG 1 cut(s) 1555
BssMI GATC 7 cut(s) 19, 399, 448, 605, 633, 729, 1444
BssNI GRCGYC 2 cut(s) 5, 328
Bst2UI CCWGG 2 cut(s) 768, 1611
Bst6I CTCTTC 1 cut(s) 650
BstACI GRCGYC 2 cut(s) 5, 328
BstAFI CTTAAG 1 cut(s) 1468
BstC8I GCNNGC 2 cut(s) 1142, 1285
BstDEI CTNAG 1 cut(s) 407
BstF5I GGATG 8 cut(s) 62, 145, 471, 603, 919, 1197, 1226, 1551
BstFNI CGCG 1 cut(s) 84
BstKTI GATC 7 cut(s) 22, 402, 451, 608, 636, 732, 1447
BstMAI GTCTC 4 cut(s) 192, 465, 589, 652
BstMBI GATC 7 cut(s) 19, 399, 448, 605, 633, 729, 1444
BstMWI GCNNNNNNNGC 3 cut(s) 11, 419, 1004
BstNI CCWGG 2 cut(s) 768, 1611
BstNSI RCATGY 2 cut(s) 1079, 1144
BstSCI CCNGG 2 cut(s) 766, 1609
BstSFI CTRYAG 3 cut(s) 423, 790, 1104
BstSLI GKGCMC 1 cut(s) 883
BstUI CGCG 1 cut(s) 84
BstV2I GAAGAC 2 cut(s) 278, 1180
BstX2I RGATCY 3 cut(s) 19, 605, 633
BstYI RGATCY 3 cut(s) 19, 605, 633
BsuRI GGCC 1 cut(s) 987
BtsCI GGATG 8 cut(s) 62, 145, 471, 603, 919, 1197, 1226, 1551
BtsIMutI CAGTG 1 cut(s) 1330
BveI ACCTGC 1 cut(s) 1319
Cac8I GCNNGC 2 cut(s) 1142, 1285
CciI TCATGA 1 cut(s) 445
Cfr10I RCCGGY 1 cut(s) 74
CseI GACGC 1 cut(s) 317
Csp6I GTAC 2 cut(s) 80, 1456
CspCI CAANNNNNGTGG 2 cut(s) 607, 642
CviAII CATG 9 cut(s) 121, 180, 446, 678, 743, 784, 1076, 1141, 1196
CviQI GTAC 2 cut(s) 80, 1456
DdeI CTNAG 1 cut(s) 407
DpnI GATC 7 cut(s) 21, 401, 450, 607, 635, 731, 1446
DpnII GATC 7 cut(s) 19, 399, 448, 605, 633, 729, 1444
Eam1104I CTCTTC 1 cut(s) 650
EarI CTCTTC 1 cut(s) 650
Eco31I GGTCTC 1 cut(s) 465
Eco32I GATATC 2 cut(s) 223, 1115
Eco57I CTGAAG 1 cut(s) 1326
Eco88I CYCGRG 1 cut(s) 960
EcoRI GAATTC 1 cut(s) 233
EcoRII CCWGG 2 cut(s) 766, 1609
EcoRV GATATC 2 cut(s) 223, 1115
EcoT22I ATGCAT 2 cut(s) 679, 1197
FaeI CATG 9 cut(s) 124, 183, 449, 681, 746, 787, 1079, 1144, 1199
FalI AAGNNNNNCTT 2 cut(s) 495, 527
FatI CATG 9 cut(s) 120, 179, 445, 677, 742, 783, 1075, 1140, 1195
FauI CCCGC 1 cut(s) 1292
FbaI TGATCA 2 cut(s) 448, 729
Fnu4HI GCNGC 1 cut(s) 12
FokI GGATG 8 cut(s) 49, 152, 478, 610, 906, 1204, 1213, 1538
Fsp4HI GCNGC 1 cut(s) 12
FspBI CTAG 2 cut(s) 842, 1409
GluI GCNGC 1 cut(s) 12
HaeIII GGCC 1 cut(s) 987
HapII CCGG 2 cut(s) 75, 1094
HgaI GACGC 1 cut(s) 317
Hin1I GRCGYC 2 cut(s) 5, 328
Hin1II CATG 9 cut(s) 124, 183, 449, 681, 746, 787, 1079, 1144, 1199
HincII GTYRAC 1 cut(s) 817
HindII GTYRAC 1 cut(s) 817
HindIII AAGCTT 2 cut(s) 126, 724
HinfI GANTC 7 cut(s) 200, 313, 388, 763, 808, 916, 1038
HpaII CCGG 2 cut(s) 75, 1094
HphI GGTGA 1 cut(s) 281
Hpy166II GTNNAC 2 cut(s) 80, 817
Hpy188I TCNGA 7 cut(s) 382, 393, 1123, 1231, 1306, 1387, 1556
Hpy188III TCNNGA 8 cut(s) 50, 446, 517, 595, 913, 941, 962, 1070
Hpy8I GTNNAC 2 cut(s) 80, 817
Hpy99I CGWCG 1 cut(s) 860
HpyCH4IV ACGT 3 cut(s) 213, 858, 1376
HpyCH4V TGCA 8 cut(s) 14, 278, 677, 1106, 1188, 1195, 1328, 1392
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 419, 1004
HpyF3I CTNAG 1 cut(s) 407
HpySE526I ACGT 3 cut(s) 213, 858, 1376
Hsp92I GRCGYC 2 cut(s) 5, 328
Hsp92II CATG 9 cut(s) 124, 183, 449, 681, 746, 787, 1079, 1144, 1199
Ksp22I TGATCA 2 cut(s) 448, 729
Kzo9I GATC 7 cut(s) 19, 399, 448, 605, 633, 729, 1444
LweI GCATC 4 cut(s) 71, 130, 456, 1182
MaeI CTAG 2 cut(s) 842, 1409
MaeII ACGT 3 cut(s) 213, 858, 1376
MaeIII GTNAC 3 cut(s) 184, 1087, 1099
MalI GATC 7 cut(s) 21, 401, 450, 607, 635, 731, 1446
MboI GATC 7 cut(s) 19, 399, 448, 605, 633, 729, 1444
MfeI CAATTG 2 cut(s) 954, 999
MflI RGATCY 3 cut(s) 19, 605, 633
MhlI GDGCHC 1 cut(s) 883
MlyI GAGTC 3 cut(s) 194, 910, 1032
MmeI TCCRAC 1 cut(s) 831
Mph1103I ATGCAT 2 cut(s) 679, 1197
MroXI GAANNNNTTC 5 cut(s) 128, 436, 635, 908, 1065
MseI TTAA 7 cut(s) 102, 542, 870, 1022, 1469, 1478, 1500
MspA1I CMGCKG 1 cut(s) 11
MspCI CTTAAG 1 cut(s) 1468
MspI CCGG 2 cut(s) 75, 1094
MspR9I CCNGG 2 cut(s) 768, 1611
MunI CAATTG 2 cut(s) 954, 999
Mva1269I GAATGC 2 cut(s) 45, 908
MvaI CCWGG 2 cut(s) 768, 1611
MvnI CGCG 1 cut(s) 84
MwoI GCNNNNNNNGC 3 cut(s) 11, 419, 1004
NdeII GATC 7 cut(s) 19, 399, 448, 605, 633, 729, 1444
NlaIII CATG 9 cut(s) 124, 183, 449, 681, 746, 787, 1079, 1144, 1199
NlaIV GGNNCC 2 cut(s) 364, 1535
NmeAIII GCCGAG 1 cut(s) 9
NmuCI GTSAC 2 cut(s) 1087, 1099
NsiI ATGCAT 2 cut(s) 679, 1197
NspI RCATGY 2 cut(s) 1079, 1144
PaeI GCATGC 1 cut(s) 1144
PagI TCATGA 1 cut(s) 445
PciI ACATGT 1 cut(s) 1075
PctI GAATGC 2 cut(s) 45, 908
PdmI GAANNNNTTC 5 cut(s) 128, 436, 635, 908, 1065
PfeI GAWTC 4 cut(s) 313, 388, 763, 808
PflFI GACNNNGTC 1 cut(s) 203
PfoI TCCNGGA 2 cut(s) 766, 1609
PkrI GCNGC 1 cut(s) 13
PleI GAGTC 3 cut(s) 194, 910, 1032
PpsI GAGTC 3 cut(s) 194, 910, 1032
PscI ACATGT 1 cut(s) 1075
PshBI ATTAAT 2 cut(s) 542, 870
Psp1406I AACGTT 1 cut(s) 1376
Psp6I CCWGG 2 cut(s) 766, 1609
PspGI CCWGG 2 cut(s) 766, 1609
PspN4I GGNNCC 2 cut(s) 364, 1535
PstI CTGCAG 1 cut(s) 1108
PsuI RGATCY 3 cut(s) 19, 605, 633
PsyI GACNNNGTC 1 cut(s) 203
PvuII CAGCTG 1 cut(s) 11
RsaI GTAC 2 cut(s) 81, 1457
RsaNI GTAC 2 cut(s) 80, 1456
SaqAI TTAA 7 cut(s) 102, 542, 870, 1022, 1469, 1478, 1500
SatI GCNGC 1 cut(s) 12
Sau3AI GATC 7 cut(s) 19, 399, 448, 605, 633, 729, 1444
SchI GAGTC 3 cut(s) 194, 910, 1032
ScrFI CCNGG 2 cut(s) 768, 1611
SduI GDGCHC 1 cut(s) 883
SfaNI GCATC 4 cut(s) 71, 130, 456, 1182
SfcI CTRYAG 3 cut(s) 423, 790, 1104
SmlI CTYRAG 3 cut(s) 50, 947, 1468
SmoI CTYRAG 3 cut(s) 50, 947, 1468
SphI GCATGC 1 cut(s) 1144
SsiI CCGC 1 cut(s) 1285
SspI AATATT 1 cut(s) 1397
SspMI CTAG 2 cut(s) 842, 1409
StyD4I CCNGG 2 cut(s) 766, 1609
TaiI ACGT 3 cut(s) 216, 861, 1379
TaqI TCGA 5 cut(s) 271, 666, 914, 1071, 1365
TaqII GACCGA 1 cut(s) 392
TfiI GAWTC 4 cut(s) 313, 388, 763, 808
Tru1I TTAA 7 cut(s) 102, 542, 870, 1022, 1469, 1478, 1500
Tru9I TTAA 7 cut(s) 102, 542, 870, 1022, 1469, 1478, 1500
TscAI CASTG 1 cut(s) 1330
TseFI GTSAC 2 cut(s) 1087, 1099
TseI GCWGC 1 cut(s) 11
Tsp45I GTSAC 2 cut(s) 1087, 1099
TspDTI ATGAA 6 cut(s) 137, 290, 759, 1040, 1179, 1284
TspGWI ACGGA 2 cut(s) 179, 1546
TspRI CASTG 1 cut(s) 1330
Tth111I GACNNNGTC 1 cut(s) 203
Vha464I CTTAAG 1 cut(s) 1468
VspI ATTAAT 2 cut(s) 542, 870
XapI RAATTY 2 cut(s) 233, 1480
XceI RCATGY 2 cut(s) 1079, 1144
XcmI CCANNNNNNNNNTGG 2 cut(s) 315, 586
XmnI GAANNNNTTC 5 cut(s) 128, 436, 635, 908, 1065
XspI CTAG 2 cut(s) 842, 1409
Zsp2I ATGCAT 2 cut(s) 679, 1197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.