FvH4_3g17400

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000110
Physical Location & Seq
Reverse (-)
11078832 .. 11080448
1617 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17400.t1

Sequence Viewer

Length: 1617 bp
ATGTCTTCAAAGAAGTCACCAGATGAATGGCACAGAGTCTTGAAGAGTTTAAATTGGCATCTAAATAACAACTCATTGCTCGGCCCTGTCAAAACCTTGTTGTTGCTTAGTTACAATGATTTGCCATCCCAGTTGAAGCACTGTTTCCTTTATTGTTCCCTCTTACCAGAAGATTATTTGATTCAAAGAAAAAGGTTGATTAAACTGTGGATAGCTGAAGGATTTGTTGAACACGCGAACGGGGTCACGCCAGAAGAAGTTGCAGGCGGCTATCTTTTGGATCTCTGCTTCCGTAGCATGTTACAAGTTGTTAGGAGAAATGGATCAGGAAGGCCGAAACAAGTTAAGATGCATGATCTTATGCGAGAGCTTGCTCTCTCGATATCCGAAAAGGAAAAGTTTGGACTTGTATATGACGGAAGACAAGTCATGAAAGAGATCACAACCCGTCGCTTGTCAATTCACACAACAAGTAATGTAGGAGAAATTAAATCAGGTCCGGGTATGTCAAAGATTCGTTCTCTTCTTATCTTTGCTACTGATGATATGTCATCATTGTCTTTCTCAAATGCACTACTTTCTCGATTCAAATTGCTGAGGACTCTAGACTTGGAGGATGTCCAAATTGATAAACTCCCGGATGCAGTTGTTTACTTGCTCAACCTGAGATATTTAAATCTGAGGGGCTGCTCTCTAATCACACAACTTCCAGAGTCCATAGGGCGTCTCCGCAACCTTCAATTTCTGAACATCAGGGATACCAGGATAGAGTCACTTCCACAAGGAATTACAAAGTTGCTCAACCTGCGTCATCTAATAATGCATCGCTCCGCTGGAAACAGTCTGGTGTTCAAGTTTTCGAGTGGGACAAAAGCGCCATCAAATATTTGCCAGTTGCTAAATTTGCAATGTTTAATTACTATTGAATCAGAAGGGGACACTATCAGACTTACTGGCAACCTGACTCAACTTACGACCCTCGGCATATCGAATTTGAAAGAAACGGATGAGAGTGACCTTTGGGTCTCAATTAACAAGTTGACTCTGCTTCAAGCTCTAGAGTTAATGGCAAGTAATGAAGAGGAATTTCTTCCTGTCAAGACACAATGTCCACCTCTTCCGCACCTTCAAAAGCTTTATTTGACTGGCAGACTGCAAAAGGTAGTACCATGGTTTTCTTCCCTGCATAGCCTCACACTTCTGCAGCTGCATTGGTCTATGCTTGAAGACGATGTACTACCTCACATTGAAGCACTTCCCAATCTGACGAAGCTTAATCTTAATAATGCATATGTTGGGGAAGAGTTATGTTTCCGCAGAGGTTTTGTAAAGCTGGTGTCATTGCAGTTGAAGAATTTTGGCTCCTTGAAAAAGATAACTATAGAAAAAGGGGCCATGCCAAATCTCCGGGACATATGGATTGTCAGCTGCATGGAATTGAAGGCAGTGCCGTTGGGACTTGAAAACCTTTCAAATCTACAAACCTTGACCCTGAGAATTGTTCCAACAGAAATTATAAACCCCATTCGGAAAGGAGGTGCGGATCGCAAAAATGTACAACACATCCGAGAGATCAGACATATTTCATCCAAGTGGGTCTACGAAAACTTGTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

539

Amino Acids

61.19

Weight (kDa)

9.28

Isoelectric Point (pI)

51.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 55 - 125 2.4e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 171 - 500 2.1e-40 Leucine-rich repeat region
LRR_8 PF13855 199 - 256 6.5e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1517
AasI GACNNNNNNGTC 1 cut(s) 1022
Acc36I ACCTGC 1 cut(s) 813
AccI GTMKAC 1 cut(s) 1599
AccII CGCG 1 cut(s) 236
AciI CCGC 6 cut(s) 267, 730, 831, 1121, 1315, 1541
AclWI GGATC 3 cut(s) 288, 331, 1551
AcsI RAATTY 4 cut(s) 901, 991, 1085, 1354
AcuI CTGAAG 1 cut(s) 237
AcyI GRCGYC 1 cut(s) 724
AfaI GTAC 3 cut(s) 1167, 1236, 1557
AhdI GACNNNNNGTC 1 cut(s) 1107
AjnI CCWGG 1 cut(s) 761
AluBI AGCT 8 cut(s) 215, 370, 1055, 1135, 1207, 1273, 1333, 1428
AluI AGCT 8 cut(s) 215, 370, 1055, 1135, 1207, 1273, 1333, 1428
Alw26I GTCTC 2 cut(s) 731, 1030
AlwI GGATC 3 cut(s) 288, 331, 1551
AoxI GGCC 3 cut(s) 82, 332, 1392
ApeKI GCWGC 4 cut(s) 687, 1204, 1207, 1428
ApoI RAATTY 4 cut(s) 901, 991, 1085, 1354
Asp700I GAANNNNTTC 2 cut(s) 1089, 1254
AspLEI GCGC 1 cut(s) 877
AspS9I GGNCC 3 cut(s) 83, 497, 1392
AsuC2I CCSGG 3 cut(s) 501, 638, 1409
AsuHPI GGTGA 1 cut(s) 9
AvaII GGWCC 1 cut(s) 497
BarI GAAGNNNNNNTAC 2 cut(s) 1218, 1250
BbsI GAAGAC 2 cut(s) 427, 1233
BbvCI CCTCAGC 1 cut(s) 596
BbvI GCAGC 4 cut(s) 674, 1194, 1216, 1415
BccI CCATC 2 cut(s) 133, 886
BceAI ACGGC 1 cut(s) 1435
BciT130I CCWGG 1 cut(s) 763
BciVI GTATCC 1 cut(s) 751
BcnI CCSGG 3 cut(s) 501, 638, 1409
BcoDI GTCTC 2 cut(s) 731, 1030
BfaI CTAG 3 cut(s) 605, 1058, 1615
BfmI CTRYAG 2 cut(s) 1202, 1380
BfoI RGCGCY 1 cut(s) 878
BfuAI ACCTGC 1 cut(s) 813
BfuI GTATCC 1 cut(s) 751
BisI GCNGC 5 cut(s) 268, 688, 1205, 1208, 1429
BlsI GCNGC 5 cut(s) 269, 689, 1206, 1209, 1430
Bme1390I CCNGG 4 cut(s) 501, 638, 763, 1409
Bme18I GGWCC 1 cut(s) 497
BmeRI GACNNNNNGTC 1 cut(s) 1107
BmgT120I GGNCC 3 cut(s) 83, 497, 1392
BmiI GGNNCC 2 cut(s) 1363, 1393
BmrFI CCNGG 4 cut(s) 501, 638, 763, 1409
BmrI ACTGGG 1 cut(s) 124
BmsI GCATC 4 cut(s) 67, 339, 631, 832
BmuI ACTGGG 1 cut(s) 124
BpiI GAAGAC 2 cut(s) 427, 1233
Bpu10I CCTNAGC 1 cut(s) 596
BpuMI CCSGG 3 cut(s) 501, 638, 1409
BsaHI GRCGYC 1 cut(s) 724
BsaI GGTCTC 1 cut(s) 1030
BsaJI CCNNGG 2 cut(s) 979, 1169
Bse1I ACTGG 4 cut(s) 130, 892, 958, 1150
Bse3DI GCAATG 3 cut(s) 74, 914, 1340
BseBI CCWGG 1 cut(s) 763
BseDI CCNNGG 2 cut(s) 979, 1169
BseGI GGATG 6 cut(s) 125, 622, 646, 1012, 1563, 1586
BseMI GCAATG 3 cut(s) 74, 914, 1340
BseMII CTCAG 4 cut(s) 587, 656, 671, 1484
BseNI ACTGG 4 cut(s) 130, 892, 958, 1150
BseXI GCAGC 4 cut(s) 674, 1194, 1216, 1415
Bsh1236I CGCG 1 cut(s) 236
BshFI GGCC 3 cut(s) 84, 334, 1394
BsiSI CCGG 3 cut(s) 500, 638, 1408
BslFI GGGAC 4 cut(s) 880, 950, 1424, 1470
BsmAI GTCTC 2 cut(s) 731, 1030
BsmBI CGTCTC 1 cut(s) 731
BsmFI GGGAC 4 cut(s) 880, 950, 1424, 1470
BsnI GGCC 3 cut(s) 84, 334, 1394
Bso31I GGTCTC 1 cut(s) 1030
Bsp1407I TGTACA 1 cut(s) 1555
Bsp143I GATC 6 cut(s) 280, 323, 355, 438, 1543, 1572
Bsp19I CCATGG 1 cut(s) 1169
BspACI CCGC 6 cut(s) 267, 730, 831, 1121, 1315, 1541
BspANI GGCC 3 cut(s) 84, 334, 1394
BspCNI CTCAG 4 cut(s) 588, 657, 672, 1485
BspFNI CGCG 1 cut(s) 236
BspHI TCATGA 1 cut(s) 429
BspLI GGNNCC 2 cut(s) 1363, 1393
BspMAI CTGCAG 1 cut(s) 1206
BspMI ACCTGC 1 cut(s) 813
BspPI GGATC 3 cut(s) 288, 331, 1551
BspTNI GGTCTC 1 cut(s) 1030
BsrDI GCAATG 3 cut(s) 74, 914, 1340
BsrGI TGTACA 1 cut(s) 1555
BsrI ACTGG 4 cut(s) 130, 892, 958, 1150
BssECI CCNNGG 2 cut(s) 979, 1169
BssMI GATC 6 cut(s) 280, 323, 355, 438, 1543, 1572
BssNI GRCGYC 1 cut(s) 724
BssT1I CCWWGG 1 cut(s) 1169
Bst2UI CCWGG 1 cut(s) 763
Bst4CI ACNGT 3 cut(s) 143, 207, 842
Bst6I CTCTTC 5 cut(s) 38, 528, 1074, 1122, 1296
BstACI GRCGYC 1 cut(s) 724
BstAUI TGTACA 1 cut(s) 1555
BstC8I GCNNGC 2 cut(s) 265, 372
BstDEI CTNAG 5 cut(s) 107, 596, 665, 680, 1493
BstDSI CCRYGG 1 cut(s) 1169
BstF5I GGATG 6 cut(s) 125, 622, 646, 1012, 1563, 1586
BstFNI CGCG 1 cut(s) 236
BstH2I RGCGCY 1 cut(s) 878
BstHHI GCGC 1 cut(s) 877
BstKTI GATC 6 cut(s) 283, 326, 358, 441, 1546, 1575
BstMAI GTCTC 2 cut(s) 731, 1030
BstMBI GATC 6 cut(s) 280, 323, 355, 438, 1543, 1572
BstMWI GCNNNNNNNGC 3 cut(s) 294, 805, 904
BstNI CCWGG 1 cut(s) 763
BstNSI RCATGY 1 cut(s) 301
BstSCI CCNGG 4 cut(s) 499, 636, 761, 1407
BstSFI CTRYAG 2 cut(s) 1202, 1380
BstUI CGCG 1 cut(s) 236
BstV1I GCAGC 4 cut(s) 674, 1194, 1216, 1415
BstV2I GAAGAC 2 cut(s) 427, 1233
BstX2I RGATCY 1 cut(s) 280
BstXI CCANNNNNNTGG 1 cut(s) 27
BstYI RGATCY 1 cut(s) 280
BsuI GTATCC 1 cut(s) 751
BsuRI GGCC 3 cut(s) 84, 334, 1394
BtgI CCRYGG 1 cut(s) 1169
BtgZI GCGATG 1 cut(s) 809
BtsCI GGATG 6 cut(s) 125, 622, 646, 1012, 1563, 1586
BtsI GCAGTG 1 cut(s) 1452
BtsIMutI CAGTG 2 cut(s) 139, 1452
BveI ACCTGC 1 cut(s) 813
Cac8I GCNNGC 2 cut(s) 265, 372
CciI TCATGA 1 cut(s) 429
CfoI GCGC 1 cut(s) 877
Cfr13I GGNCC 3 cut(s) 83, 497, 1392
CseI GACGC 2 cut(s) 713, 797
Csp6I GTAC 3 cut(s) 1166, 1235, 1556
CviAII CATG 6 cut(s) 298, 353, 430, 1170, 1396, 1432
CviQI GTAC 3 cut(s) 1166, 1235, 1556
DdeI CTNAG 5 cut(s) 107, 596, 665, 680, 1493
DpnI GATC 6 cut(s) 282, 325, 357, 440, 1545, 1574
DpnII GATC 6 cut(s) 280, 323, 355, 438, 1543, 1572
DraI TTTAAA 2 cut(s) 51, 675
DrdI GACNNNNNNGTC 1 cut(s) 1022
DriI GACNNNNNGTC 1 cut(s) 1107
DseDI GACNNNNNNGTC 1 cut(s) 1022
Eam1104I CTCTTC 5 cut(s) 38, 528, 1074, 1122, 1296
Eam1105I GACNNNNNGTC 1 cut(s) 1107
EarI CTCTTC 5 cut(s) 38, 528, 1074, 1122, 1296
Eco130I CCWWGG 1 cut(s) 1169
Eco31I GGTCTC 1 cut(s) 1030
Eco32I GATATC 1 cut(s) 384
Eco47I GGWCC 1 cut(s) 497
Eco57I CTGAAG 1 cut(s) 237
EcoRII CCWGG 1 cut(s) 761
EcoRV GATATC 1 cut(s) 384
EcoT14I CCWWGG 1 cut(s) 1169
EcoT22I ATGCAT 3 cut(s) 354, 825, 1291
ErhI CCWWGG 1 cut(s) 1169
Esp3I CGTCTC 1 cut(s) 731
FaeI CATG 6 cut(s) 301, 356, 433, 1173, 1399, 1435
FaqI GGGAC 4 cut(s) 880, 950, 1424, 1470
FatI CATG 6 cut(s) 297, 352, 429, 1169, 1395, 1431
FauNDI CATATG 2 cut(s) 1291, 1415
FblI GTMKAC 1 cut(s) 1599
Fnu4HI GCNGC 5 cut(s) 268, 688, 1205, 1208, 1429
FokI GGATG 6 cut(s) 112, 629, 653, 1019, 1550, 1573
Fsp4HI GCNGC 5 cut(s) 268, 688, 1205, 1208, 1429
FspBI CTAG 3 cut(s) 605, 1058, 1615
GlaI GCGC 1 cut(s) 876
GluI GCNGC 5 cut(s) 268, 688, 1205, 1208, 1429
HaeII RGCGCY 1 cut(s) 878
HaeIII GGCC 3 cut(s) 84, 334, 1394
HapII CCGG 3 cut(s) 500, 638, 1408
HgaI GACGC 2 cut(s) 713, 797
HhaI GCGC 1 cut(s) 877
Hin1I GRCGYC 1 cut(s) 724
Hin1II CATG 6 cut(s) 301, 356, 433, 1173, 1399, 1435
Hin6I GCGC 1 cut(s) 875
HinP1I GCGC 1 cut(s) 875
HincII GTYRAC 1 cut(s) 1041
HindII GTYRAC 1 cut(s) 1041
HindIII AAGCTT 2 cut(s) 1133, 1271
HpaII CCGG 3 cut(s) 500, 638, 1408
HphI GGTGA 1 cut(s) 9
Hpy166II GTNNAC 4 cut(s) 652, 1041, 1112, 1600
Hpy188I TCNGA 9 cut(s) 388, 681, 747, 931, 947, 1266, 1530, 1568, 1577
Hpy188III TCNNGA 9 cut(s) 40, 327, 379, 430, 582, 605, 710, 1058, 1099
Hpy8I GTNNAC 4 cut(s) 652, 1041, 1112, 1600
Hpy99I CGWCG 1 cut(s) 453
HpyAV CCTTC 6 cut(s) 212, 324, 746, 926, 1136, 1435
HpyCH4III ACNGT 3 cut(s) 143, 207, 842
HpyF10VI GCNNNNNNNGC 3 cut(s) 294, 805, 904
HpyF3I CTNAG 5 cut(s) 107, 596, 665, 680, 1493
Hsp92I GRCGYC 1 cut(s) 724
Hsp92II CATG 6 cut(s) 301, 356, 433, 1173, 1399, 1435
HspAI GCGC 1 cut(s) 875
Kzo9I GATC 6 cut(s) 280, 323, 355, 438, 1543, 1572
LmnI GCTCC 2 cut(s) 833, 1367
Lsp1109I GCAGC 4 cut(s) 674, 1194, 1216, 1415
LweI GCATC 4 cut(s) 67, 339, 631, 832
MaeI CTAG 3 cut(s) 605, 1058, 1615
MaeIII GTNAC 6 cut(s) 15, 110, 244, 300, 771, 1013
MalI GATC 6 cut(s) 282, 325, 357, 440, 1545, 1574
MboI GATC 6 cut(s) 280, 323, 355, 438, 1543, 1572
MflI RGATCY 1 cut(s) 280
MlyI GAGTC 6 cut(s) 45, 595, 722, 779, 958, 1036
MmeI TCCRAC 1 cut(s) 1529
Mph1103I ATGCAT 3 cut(s) 354, 825, 1291
MroXI GAANNNNTTC 2 cut(s) 1089, 1254
MslI CAYNNNNRTG 1 cut(s) 1591
MspA1I CMGCKG 3 cut(s) 833, 1207, 1428
MspI CCGG 3 cut(s) 500, 638, 1408
MspR9I CCNGG 4 cut(s) 501, 638, 763, 1409
MvaI CCWGG 1 cut(s) 763
MvnI CGCG 1 cut(s) 236
MwoI GCNNNNNNNGC 3 cut(s) 294, 805, 904
NciI CCSGG 3 cut(s) 501, 638, 1409
NcoI CCATGG 1 cut(s) 1169
NdeI CATATG 2 cut(s) 1291, 1415
NdeII GATC 6 cut(s) 280, 323, 355, 438, 1543, 1572
NlaIII CATG 6 cut(s) 301, 356, 433, 1173, 1399, 1435
NlaIV GGNNCC 2 cut(s) 1363, 1393
NmeAIII GCCGAG 2 cut(s) 60, 960
NmuCI GTSAC 4 cut(s) 15, 244, 771, 1013
NsiI ATGCAT 3 cut(s) 354, 825, 1291
NspI RCATGY 1 cut(s) 301
PagI TCATGA 1 cut(s) 429
PdmI GAANNNNTTC 2 cut(s) 1089, 1254
PfeI GAWTC 4 cut(s) 181, 514, 585, 926
PfoI TCCNGGA 2 cut(s) 636, 1407
PkrI GCNGC 5 cut(s) 269, 689, 1206, 1209, 1430
PleI GAGTC 6 cut(s) 44, 595, 721, 778, 958, 1036
PpsI GAGTC 6 cut(s) 44, 595, 721, 778, 958, 1036
PsiI TTATAA 1 cut(s) 1517
Psp6I CCWGG 1 cut(s) 761
PspGI CCWGG 1 cut(s) 761
PspN4I GGNNCC 2 cut(s) 1363, 1393
PspPI GGNCC 3 cut(s) 83, 497, 1392
PstI CTGCAG 1 cut(s) 1206
PsuI RGATCY 1 cut(s) 280
PvuII CAGCTG 2 cut(s) 1207, 1428
RsaI GTAC 3 cut(s) 1167, 1236, 1557
RsaNI GTAC 3 cut(s) 1166, 1235, 1556
RseI CAYNNNNRTG 1 cut(s) 1591
SatI GCNGC 5 cut(s) 268, 688, 1205, 1208, 1429
Sau3AI GATC 6 cut(s) 280, 323, 355, 438, 1543, 1572
Sau96I GGNCC 3 cut(s) 83, 497, 1392
SchI GAGTC 6 cut(s) 45, 595, 722, 779, 958, 1036
ScrFI CCNGG 4 cut(s) 501, 638, 763, 1409
SfaNI GCATC 4 cut(s) 67, 339, 631, 832
SfcI CTRYAG 2 cut(s) 1202, 1380
SinI GGWCC 1 cut(s) 497
SmiI ATTTAAAT 1 cut(s) 675
SmiMI CAYNNNNRTG 1 cut(s) 1591
SsiI CCGC 6 cut(s) 267, 730, 831, 1121, 1315, 1541
SspI AATATT 1 cut(s) 886
SspMI CTAG 3 cut(s) 605, 1058, 1615
StyD4I CCNGG 4 cut(s) 499, 636, 761, 1407
StyI CCWWGG 1 cut(s) 1169
SwaI ATTTAAAT 1 cut(s) 675
TaaI ACNGT 3 cut(s) 143, 207, 842
TaqI TCGA 4 cut(s) 380, 583, 860, 989
TatI WGTACW 2 cut(s) 1234, 1555
TauI GCSGC 1 cut(s) 270
TfiI GAWTC 4 cut(s) 181, 514, 585, 926
TscAI CASTG 2 cut(s) 146, 1452
TseFI GTSAC 4 cut(s) 15, 244, 771, 1013
TseI GCWGC 4 cut(s) 687, 1204, 1207, 1428
Tsp45I GTSAC 4 cut(s) 15, 244, 771, 1013
TspDTI ATGAA 4 cut(s) 39, 446, 1092, 1575
TspGWI ACGGA 3 cut(s) 281, 432, 1019
TspRI CASTG 2 cut(s) 146, 1452
VpaK11BI GGWCC 1 cut(s) 497
XapI RAATTY 4 cut(s) 901, 991, 1085, 1354
XbaI TCTAGA 2 cut(s) 604, 1057
XceI RCATGY 1 cut(s) 301
XmiI GTMKAC 1 cut(s) 1599
XmnI GAANNNNTTC 2 cut(s) 1089, 1254
XspI CTAG 3 cut(s) 605, 1058, 1615
Zsp2I ATGCAT 3 cut(s) 354, 825, 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.