Rmu_sc0034280.1_g000001

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0034280.1
OG0000110
Physical Location & Seq
Reverse (-)
390 .. 3022
2633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0034280.1_g000001.1.cds

Sequence Viewer

Length: 2163 bp
atgagctacaaggaattgctagagatactggtgaactacttggagttcaaaagatatgtagttgttttggatgatgtgtggaatatccaacttttgagagaaataagggtatcacttcaagatagacaacttggaagtcgaatcctgctaacaactcgaaatgatgacatagcattccattcgtatggagttgaaagccttgttcatcgtattaaacccttggaggacaatgacgcctgggagctcttcagccggaaagcatttttaacttatcataataagtgttgtccaacagagcttgaaacattagcttgtgaactagtggctaagtgtaaaggcctacctttggctatcgtgactctaggtggtcttatgtcttcaaagaaatcatctgctgagtggagagaagtgcgcaacaacttaaattggcatcttacaaacgatcactttcttgaaccggtgaagagcatcttgttgcttagttacaatgatttaccataccgtttgaagcattgtttcttatattgttcccttttcccagaagatcatttgatcggaagatacaggcttgttagattgtggatagctgaagggtttattgaacatgtcaatggggtcacactagaagaccttgcagagaggtatctcatagagctaacttttcgcagcatgttgcaatttgtgaggaaggattctcaatctagaataccagagcagtgtctgatgcatgatctgatgcgggagattgctctctcaacttcagaaagagaaaagttcggcattgtatttgataggagaggagtaatggaagaaactagagttcgccgtttggcagttcatacaactgaaggagaaattgaattgtgcacaggtatgttgcagcttcgtacatttcttgtgtttccttctggcttacgttctccattgttatcaaatacatggtcttctgggttctacttgttgagagttctagatttggaaaatgtaccaattgataggcttccaaacaatctagtgtacctattcaatttaagatatttgaatcttagaggaactcagattaaaaggcttccaaaagatattggaaggctccacaaccttcaaaccttggacatcagtgacacaaacataaagatacttcctagtggaagttcagagttgataaacctgcgccatctgtatatgggacatttcaatgatactggatttgagaccttcatatgtgctagtgggattagagcatcatcacatatttctatgttcaagaagttgcaagatttattttttgttcggtctgataaaaacatgatcagacttctgagaaaaatgacccaacttaggatgcttggcattacaaatgtaaaagaaagtgatgaaatagagctctgtgcctcaattcagaagatgaagatcctggtctggttgaatttatcagtaagtgatagctcggagggatttcttcgaattgacgcacttgcttcacctcctccgtatcttgagtcccttttgttacgtggtaaactggaaagcataccatgttggttttgttcattacagtgcctcacacatatagagctgctttggtgtagacttgaagaagatttactgcctcacattgaggcgcttccctgtctggaacgtattctccttgataatgcttatgttgggaaagagatgagtttcagtagaggctttgcaaagcttacacatttggagttgttcaatttccgagtattaagtaaggtaagtgtagaaaaaggggtgatgccaaatctccaatacctgggacttcgaagctgcaagaaattgaagacattgccgcatggtcttgaataccttactcatctcgaaaaattgtatttggagtctgttacaaggaagcttatagagtccatacgagaaggcggtgtggatcgtccaaaggatcattcgtgtccatgttcaattgtcaagtgctttgtgggagatgatgaaaacctgaatgagtttgagatcaaaatgatcaatggaaagagggcttcagtgtttaaggctgatagttctgggataagctctggctctaggaagaggactagggatatgaacgaggaccatagcatgactgatattgatgctgaagctgaggaggacagcgcctcatctcctaagatgcagaaaccatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

720

Amino Acids

83.14

Weight (kDa)

7.28

Isoelectric Point (pI)

54.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 413
Acc36I ACCTGC 1 cut(s) 1176
AccB7I CCANNNNNTGG 1 cut(s) 1783
AccI GTMKAC 1 cut(s) 1588
AciI CCGC 3 cut(s) 739, 1820, 1905
AclWI GGATC 3 cut(s) 1405, 1920, 1932
AcsI RAATTY 1 cut(s) 1426
AcuI CTGAAG 6 cut(s) 232, 609, 744, 867, 2004, 2136
AcyI GRCGYC 1 cut(s) 234
AfaI GTAC 3 cut(s) 889, 987, 1019
AfiI CCNNNNNNNGG 3 cut(s) 346, 1338, 1783
AflIII ACRYGT 1 cut(s) 604
AgeI ACCGGT 1 cut(s) 457
AhlI ACTAGT 1 cut(s) 319
AjnI CCWGG 3 cut(s) 236, 1413, 1782
AjuI GAANNNNNNNTTGG 2 cut(s) 1912, 1944
AloI GAACNNNNNNTCC 2 cut(s) 1629, 1661
Alw21I GWGCWC 3 cut(s) 246, 869, 1386
Alw26I GTCTC 1 cut(s) 1205
Alw44I GTGCAC 1 cut(s) 865
AlwI GGATC 3 cut(s) 1405, 1920, 1932
AlwNI CAGNNNCTG 1 cut(s) 721
AoxI GGCC 1 cut(s) 337
ApaLI GTGCAC 1 cut(s) 865
ApeKI GCWGC 4 cut(s) 666, 880, 1576, 1797
ApoI RAATTY 1 cut(s) 1426
ArsI GACNNNNNNTTYG 2 cut(s) 926, 958
AsiGI ACCGGT 1 cut(s) 457
Asp700I GAANNNNTTC 1 cut(s) 1641
AspLEI GCGC 4 cut(s) 414, 1173, 1624, 2135
AspS9I GGNCC 1 cut(s) 2089
AsuHPI GGTGA 4 cut(s) 43, 472, 1473, 1774
AsuII TTCGAA 2 cut(s) 1462, 1792
AvaII GGWCC 1 cut(s) 2089
BaeGI GKGCMC 1 cut(s) 869
BanII GRGCYC 2 cut(s) 246, 1386
BarI GAAGNNNNNNTAC 2 cut(s) 1587, 1619
BbsI GAAGAC 4 cut(s) 369, 633, 936, 1817
Bbv12I GWGCWC 3 cut(s) 246, 869, 1386
BbvCI CCTCAGC 1 cut(s) 2121
BbvI GCAGC 4 cut(s) 678, 892, 1563, 1784
BccI CCATC 1 cut(s) 1182
BceAI ACGGC 1 cut(s) 810
BcgI CGANNNNNNTGC 2 cut(s) 162, 196
BciT130I CCWGG 3 cut(s) 238, 1415, 1784
BclI TGATCA 2 cut(s) 1308, 2001
BcoDI GTCTC 1 cut(s) 1205
BcuI ACTAGT 1 cut(s) 319
BfoI RGCGCY 2 cut(s) 1625, 2136
BfuAI ACCTGC 1 cut(s) 1176
BisI GCNGC 5 cut(s) 667, 881, 1577, 1798, 1820
BlsI GCNGC 5 cut(s) 668, 882, 1578, 1799, 1821
Bme1390I CCNGG 3 cut(s) 238, 1415, 1784
Bme18I GGWCC 1 cut(s) 2089
BmgT120I GGNCC 1 cut(s) 2089
BmiI GGNNCC 1 cut(s) 1091
BmrFI CCNGG 3 cut(s) 238, 1415, 1784
BmsI GCATC 9 cut(s) 439, 477, 714, 726, 1250, 1332, 1755, 2101, 2139
BpiI GAAGAC 4 cut(s) 369, 633, 936, 1817
Bpu10I CCTNAGC 1 cut(s) 2121
Bpu14I TTCGAA 2 cut(s) 1462, 1792
BpuEI CTTGAG 1 cut(s) 1517
BsaAI YACGTR 1 cut(s) 1514
BsaBI GATNNNNATC 1 cut(s) 1409
BsaHI GRCGYC 1 cut(s) 234
BsaI GGTCTC 1 cut(s) 1205
BsaJI CCNNGG 4 cut(s) 219, 237, 1107, 1783
BsaWI WCCGGW 1 cut(s) 457
BsaXI ACNNNNNCTCC 2 cut(s) 1629, 1659
Bsc4I CCNNNNNNNGG 3 cut(s) 346, 1338, 1783
Bse118I RCCGGY 1 cut(s) 457
Bse1I ACTGG 3 cut(s) 33, 1207, 1527
Bse3DI GCAATG 1 cut(s) 1814
Bse8I GATNNNNATC 1 cut(s) 1409
BseBI CCWGG 3 cut(s) 238, 1415, 1784
BseDI CCNNGG 4 cut(s) 219, 237, 1107, 1783
BseGI GGATG 2 cut(s) 76, 1347
BseJI GATNNNNATC 1 cut(s) 1409
BseLI CCNNNNNNNGG 3 cut(s) 346, 1338, 1783
BseMI GCAATG 1 cut(s) 1814
BseMII CTCAG 4 cut(s) 387, 1070, 1310, 2112
BseNI ACTGG 3 cut(s) 33, 1207, 1527
BseRI GAGGAG 3 cut(s) 813, 1476, 2138
BseSI GKGCMC 1 cut(s) 869
BseXI GCAGC 4 cut(s) 678, 892, 1563, 1784
BshFI GGCC 1 cut(s) 339
BshTI ACCGGT 1 cut(s) 457
BsiHKAI GWGCWC 3 cut(s) 246, 869, 1386
BsiSI CCGG 2 cut(s) 253, 458
BslFI GGGAC 3 cut(s) 1200, 1486, 1800
BslI CCNNNNNNNGG 3 cut(s) 346, 1338, 1783
BsmAI GTCTC 1 cut(s) 1205
BsmFI GGGAC 3 cut(s) 1200, 1486, 1800
BsmI GAATGC 1 cut(s) 173
BsnI GGCC 1 cut(s) 339
Bso31I GGTCTC 1 cut(s) 1205
Bsp119I TTCGAA 2 cut(s) 1462, 1792
Bsp1286I GDGCHC 3 cut(s) 246, 869, 1386
BspACI CCGC 3 cut(s) 739, 1820, 1905
BspANI GGCC 1 cut(s) 339
BspCNI CTCAG 4 cut(s) 388, 1069, 1311, 2113
BspLI GGNNCC 1 cut(s) 1091
BspMI ACCTGC 1 cut(s) 1176
BspPI GGATC 3 cut(s) 1405, 1920, 1932
BspQI GCTCTTC 2 cut(s) 251, 458
BspT104I TTCGAA 2 cut(s) 1462, 1792
BspTNI GGTCTC 1 cut(s) 1205
BsrDI GCAATG 1 cut(s) 1814
BsrFI RCCGGY 1 cut(s) 457
BsrI ACTGG 3 cut(s) 33, 1207, 1527
BssAI RCCGGY 1 cut(s) 457
BssECI CCNNGG 4 cut(s) 219, 237, 1107, 1783
BssNI GRCGYC 1 cut(s) 234
BssT1I CCWWGG 2 cut(s) 219, 1107
Bst2UI CCWGG 3 cut(s) 238, 1415, 1784
Bst4CI ACNGT 2 cut(s) 503, 1557
Bst6I CTCTTC 3 cut(s) 251, 458, 2060
BstACI GRCGYC 1 cut(s) 234
BstBAI YACGTR 1 cut(s) 1514
BstBI TTCGAA 2 cut(s) 1462, 1792
BstDEI CTNAG 9 cut(s) 327, 396, 479, 1046, 1056, 1319, 1337, 2121, 2145
BstF5I GGATG 2 cut(s) 76, 1347
BstH2I RGCGCY 2 cut(s) 1625, 2136
BstHHI GCGC 4 cut(s) 414, 1173, 1624, 2135
BstMAI GTCTC 1 cut(s) 1205
BstNI CCWGG 3 cut(s) 238, 1415, 1784
BstNSI RCATGY 2 cut(s) 608, 673
BstSCI CCNGG 3 cut(s) 236, 1413, 1782
BstSLI GKGCMC 1 cut(s) 869
BstV1I GCAGC 4 cut(s) 678, 892, 1563, 1784
BstV2I GAAGAC 4 cut(s) 369, 633, 936, 1817
BstX2I RGATCY 1 cut(s) 1410
BstXI CCANNNNNNTGG 1 cut(s) 185
BstYI RGATCY 1 cut(s) 1410
BsuRI GGCC 1 cut(s) 339
BtsCI GGATG 2 cut(s) 76, 1347
BtsI GCAGTG 1 cut(s) 722
BtsIMutI CAGTG 4 cut(s) 722, 1123, 1562, 2028
BveI ACCTGC 1 cut(s) 1176
CaiI CAGNNNCTG 1 cut(s) 721
CfoI GCGC 4 cut(s) 414, 1173, 1624, 2135
Cfr10I RCCGGY 1 cut(s) 457
Cfr13I GGNCC 1 cut(s) 2089
CseI GACGC 2 cut(s) 242, 1478
Csp6I GTAC 3 cut(s) 888, 986, 1018
CspAI ACCGGT 1 cut(s) 457
CviQI GTAC 3 cut(s) 888, 986, 1018
DdeI CTNAG 9 cut(s) 327, 396, 479, 1046, 1056, 1319, 1337, 2121, 2145
Eam1104I CTCTTC 3 cut(s) 251, 458, 2060
EarI CTCTTC 3 cut(s) 251, 458, 2060
Ecl136II GAGCTC 2 cut(s) 244, 1384
Eco130I CCWWGG 2 cut(s) 219, 1107
Eco147I AGGCCT 1 cut(s) 339
Eco24I GRGCYC 2 cut(s) 246, 1386
Eco31I GGTCTC 1 cut(s) 1205
Eco47I GGWCC 1 cut(s) 2089
Eco53kI GAGCTC 2 cut(s) 244, 1384
Eco57I CTGAAG 6 cut(s) 232, 609, 744, 867, 2004, 2136
EcoICRI GAGCTC 2 cut(s) 244, 1384
EcoRII CCWGG 3 cut(s) 236, 1413, 1782
EcoT14I CCWWGG 2 cut(s) 219, 1107
EcoT22I ATGCAT 1 cut(s) 729
EcoT38I GRGCYC 2 cut(s) 246, 1386
ErhI CCWWGG 2 cut(s) 219, 1107
FalI AAGNNNNNCTT 2 cut(s) 455, 487
FaqI GGGAC 3 cut(s) 1200, 1486, 1800
FauI CCCGC 1 cut(s) 732
FauNDI CATATG 1 cut(s) 1220
FbaI TGATCA 2 cut(s) 1308, 2001
FblI GTMKAC 1 cut(s) 1588
Fnu4HI GCNGC 5 cut(s) 667, 881, 1577, 1798, 1820
FokI GGATG 2 cut(s) 83, 1354
FriOI GRGCYC 2 cut(s) 246, 1386
Fsp4HI GCNGC 5 cut(s) 667, 881, 1577, 1798, 1820
FspI TGCGCA 1 cut(s) 413
GlaI GCGC 4 cut(s) 413, 1172, 1623, 2134
GluI GCNGC 5 cut(s) 667, 881, 1577, 1798, 1820
HaeII RGCGCY 2 cut(s) 1625, 2136
HaeIII GGCC 1 cut(s) 339
HapII CCGG 2 cut(s) 253, 458
HgaI GACGC 2 cut(s) 242, 1478
HhaI GCGC 4 cut(s) 414, 1173, 1624, 2135
Hin1I GRCGYC 1 cut(s) 234
Hin6I GCGC 4 cut(s) 412, 1171, 1622, 2133
HinP1I GCGC 4 cut(s) 412, 1171, 1622, 2133
HindIII AAGCTT 2 cut(s) 1700, 1880
HinfI GANTC 7 cut(s) 141, 358, 692, 1042, 1499, 1865, 1889
HpaII CCGG 2 cut(s) 253, 458
HphI GGTGA 4 cut(s) 43, 472, 1473, 1774
Hpy166II GTNNAC 6 cut(s) 34, 317, 867, 1018, 1520, 1589
Hpy8I GTNNAC 6 cut(s) 34, 317, 867, 1018, 1520, 1589
HpyAV CCTTC 8 cut(s) 584, 682, 842, 915, 1080, 1109, 1225, 1895
HpyCH4III ACNGT 2 cut(s) 503, 1557
HpyCH4IV ACGT 3 cut(s) 916, 1513, 1639
HpyCH4V TGCA 9 cut(s) 635, 676, 727, 867, 880, 1273, 1697, 1800, 2152
HpyF3I CTNAG 9 cut(s) 327, 396, 479, 1046, 1056, 1319, 1337, 2121, 2145
HpySE526I ACGT 3 cut(s) 916, 1513, 1639
Hsp92I GRCGYC 1 cut(s) 234
HspAI GCGC 4 cut(s) 412, 1171, 1622, 2133
Ksp22I TGATCA 2 cut(s) 1308, 2001
LguI GCTCTTC 2 cut(s) 251, 458
LmnI GCTCC 2 cut(s) 241, 1095
Lsp1109I GCAGC 4 cut(s) 678, 892, 1563, 1784
LweI GCATC 9 cut(s) 439, 477, 714, 726, 1250, 1332, 1755, 2101, 2139
MaeII ACGT 3 cut(s) 916, 1513, 1639
MaeIII GTNAC 6 cut(s) 355, 482, 616, 1118, 1509, 1870
MfeI CAATTG 2 cut(s) 990, 1944
MflI RGATCY 1 cut(s) 1410
MhlI GDGCHC 3 cut(s) 246, 869, 1386
MlyI GAGTC 4 cut(s) 352, 1508, 1874, 1898
MmeI TCCRAC 2 cut(s) 112, 314
Mph1103I ATGCAT 1 cut(s) 729
MroXI GAANNNNTTC 1 cut(s) 1641
MseI TTAA 7 cut(s) 213, 266, 422, 1031, 1062, 1736, 2028
MslI CAYNNNNRTG 5 cut(s) 183, 609, 872, 1194, 1555
MspI CCGG 2 cut(s) 253, 458
MspR9I CCNGG 3 cut(s) 238, 1415, 1784
MunI CAATTG 2 cut(s) 990, 1944
Mva1269I GAATGC 1 cut(s) 173
MvaI CCWGG 3 cut(s) 238, 1415, 1784
NdeI CATATG 1 cut(s) 1220
NlaIV GGNNCC 1 cut(s) 1091
NmuCI GTSAC 3 cut(s) 355, 616, 1118
NsbI TGCGCA 1 cut(s) 413
NsiI ATGCAT 1 cut(s) 729
NspI RCATGY 2 cut(s) 608, 673
NspV TTCGAA 2 cut(s) 1462, 1792
PceI AGGCCT 1 cut(s) 339
PciI ACATGT 1 cut(s) 604
PciSI GCTCTTC 2 cut(s) 251, 458
PctI GAATGC 1 cut(s) 173
PdmI GAANNNNTTC 1 cut(s) 1641
PfeI GAWTC 3 cut(s) 141, 692, 1042
PflMI CCANNNNNTGG 1 cut(s) 1783
PinAI ACCGGT 1 cut(s) 457
PkrI GCNGC 5 cut(s) 668, 882, 1578, 1799, 1821
PleI GAGTC 4 cut(s) 352, 1507, 1873, 1897
PpsI GAGTC 4 cut(s) 352, 1507, 1873, 1897
Ppu21I YACGTR 1 cut(s) 1514
PscI ACATGT 1 cut(s) 604
Psp124BI GAGCTC 2 cut(s) 246, 1386
Psp6I CCWGG 3 cut(s) 236, 1413, 1782
PspGI CCWGG 3 cut(s) 236, 1413, 1782
PspN4I GGNNCC 1 cut(s) 1091
PspPI GGNCC 1 cut(s) 2089
PstNI CAGNNNCTG 1 cut(s) 721
PsuI RGATCY 1 cut(s) 1410
RsaI GTAC 3 cut(s) 889, 987, 1019
RsaNI GTAC 3 cut(s) 888, 986, 1018
RseI CAYNNNNRTG 5 cut(s) 183, 609, 872, 1194, 1555
SacI GAGCTC 2 cut(s) 246, 1386
SapI GCTCTTC 2 cut(s) 251, 458
SaqAI TTAA 7 cut(s) 213, 266, 422, 1031, 1062, 1736, 2028
SatI GCNGC 5 cut(s) 667, 881, 1577, 1798, 1820
Sau96I GGNCC 1 cut(s) 2089
SchI GAGTC 4 cut(s) 352, 1508, 1874, 1898
ScrFI CCNGG 3 cut(s) 238, 1415, 1784
SduI GDGCHC 3 cut(s) 246, 869, 1386
SfaNI GCATC 9 cut(s) 439, 477, 714, 726, 1250, 1332, 1755, 2101, 2139
SfuI TTCGAA 2 cut(s) 1462, 1792
SinI GGWCC 1 cut(s) 2089
SmiMI CAYNNNNRTG 5 cut(s) 183, 609, 872, 1194, 1555
SmlI CTYRAG 1 cut(s) 1496
SmoI CTYRAG 1 cut(s) 1496
SpeI ACTAGT 1 cut(s) 319
SseBI AGGCCT 1 cut(s) 339
SsiI CCGC 3 cut(s) 739, 1820, 1905
SstI GAGCTC 2 cut(s) 246, 1386
StuI AGGCCT 1 cut(s) 339
StyD4I CCNGG 3 cut(s) 236, 1413, 1782
StyI CCWWGG 2 cut(s) 219, 1107
TaaI ACNGT 2 cut(s) 503, 1557
TaiI ACGT 3 cut(s) 919, 1516, 1642
TaqI TCGA 5 cut(s) 139, 157, 1462, 1792, 1848
TaqII GACCGA 1 cut(s) 1281
TauI GCSGC 1 cut(s) 1822
TfiI GAWTC 3 cut(s) 141, 692, 1042
Tru1I TTAA 7 cut(s) 213, 266, 422, 1031, 1062, 1736, 2028
Tru9I TTAA 7 cut(s) 213, 266, 422, 1031, 1062, 1736, 2028
TscAI CASTG 4 cut(s) 722, 1123, 1562, 2028
TseFI GTSAC 3 cut(s) 355, 616, 1118
TseI GCWGC 4 cut(s) 666, 880, 1576, 1797
Tsp45I GTSAC 3 cut(s) 355, 616, 1118
TspDTI ATGAA 8 cut(s) 194, 827, 1207, 1389, 1421, 1539, 1986, 2096
TspGWI ACGGA 1 cut(s) 1479
TspRI CASTG 4 cut(s) 722, 1123, 1562, 2028
Van91I CCANNNNNTGG 1 cut(s) 1783
VneI GTGCAC 1 cut(s) 865
VpaK11BI GGWCC 1 cut(s) 2089
XapI RAATTY 1 cut(s) 1426
XbaI TCTAGA 2 cut(s) 701, 970
XceI RCATGY 2 cut(s) 608, 673
XmiI GTMKAC 1 cut(s) 1588
XmnI GAANNNNTTC 1 cut(s) 1641
Zsp2I ATGCAT 1 cut(s) 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.