Rh4AG161500

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0000110
Physical Location & Seq
Forward (+)
41030945 .. 41032252
1308 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG161500.1

Sequence Viewer

Length: 1308 bp
ATGCGGAGGCCGGCACAGCAAAAACTGAAGGAGAGAAATTGTGGGTTGAAACTTGAAAGCATCAGAAACTTGGCCTATGATGTTGAAGATATCATTGATGAATTCCTGCATCACATGTATGAGAAGCAAAGTCGGAGTCGATTTTCAAGGAGGCTACACAAAACCATTTGCTTTCCAAAATGTCTTTGGTTTAGACGTAAAACTGCAAAGAGGTTACAGAAAATCACTAAAAAGATCAAAGACATTCCAGAGAGGAATCAAAGGTACGGTGTTGGCCTTGTAGCAGGAGCAACTACATCTGAAGATATTCACAAATTGGTGCAGAACCAAGCTGAGTCTTCGTTTTTCATTATGGAAGACGAACTGGTTGGGATTGAAGGCAAGAAGCAAATACTAATGGGATGGCTCATGGATGAAGAGCAACACCAAACTGTTATATCTGTGGTCGGCATGGGAGGTTCTGGAAAGACAAATCTAGTTGCCAAGACCTTCAACAATGAAAGGGTGAAGAGGCATTGCGATTGTTATGCATGGATTACCGTTTCCCAAACGTATGCTGTGGTCGACTTGTTTCGAAGCTTGATCATGGAATTCCACAAATCAAGGAAGGAAGATTTCCCTGCAAATTTGAATGCCATGAGCCGCAAGGAATTGCTAGAGTTACTAGTTAACTACTTGGAGCCCAAAAAATACCTGGTTGTTCTAGATGACGTGTGGAATATAAAAGTTTGGAGAGAAATAAAGGTATCACTTCAAGAAAGGCAACTCGGAAGTCGAATTATAGTTACAACTCGAAAAGAAGATGTAGCATCCAATTCTTTTGGAGTTAGAAGCCATGTTCACCATATTCAACCCCTGCTAAAGAATGAGGGTTGGGAGCTCTTCTGCAAAAAAGCATTCTCATCTAATGAGCACAAAACTTGTCCACCTGATTTTGTGTCATTAACTTGCCAACTTGTTGGAAAGTGTGGAGGCCTTCCTCTGGCTATTGTGGCTTTAGGTGGTCTTATGTCTTCCAAGAATTCGCTGGATCAATGGCAGCAAGTCTGCAACAGCTTGAATTGGCATATGGATAACAATTCATTGCTAGACCCTGTGAAAAACATCTTGTTGCTGAGTTTCAATGATTTGCCATCACAATTGAAACATTGCTTCCTCTTTTGTTCTCTTTTCCCAGAAGATTTTTCAATTAAGCGAAAATGGCTTATTAGATTGTGGATAGCCGAAGGATTTGTTGAAAATGTGAAGGGGGGTCACGCCCGAAGAAGTTGCAGATGGCTATCTTTGGGAAATTATCTGATTCCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

435

Amino Acids

50.42

Weight (kDa)

9.34

Isoelectric Point (pI)

55.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 16 - 52 4.5e-06 Rx N-terminal domain
NB-ARC PF00931 128 - 303 2.6e-44 NB-ARC domain
WHD_DRP PF23559 390 - 415 4.7e-07 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 564
AciI CCGC 2 cut(s) 4, 643
AclWI GGATC 1 cut(s) 1038
AcsI RAATTY 4 cut(s) 101, 590, 625, 1021
AcuI CTGAAG 2 cut(s) 47, 321
AfaI GTAC 1 cut(s) 266
AfiI CCNNNNNNNGG 1 cut(s) 982
AflIII ACRYGT 2 cut(s) 114, 711
AhlI ACTAGT 1 cut(s) 664
AjiI CACGTC 1 cut(s) 712
AjnI CCWGG 1 cut(s) 693
AluBI AGCT 4 cut(s) 332, 579, 880, 1056
AluI AGCT 4 cut(s) 332, 579, 880, 1056
Alw21I GWGCWC 2 cut(s) 882, 915
AlwI GGATC 1 cut(s) 1038
AoxI GGCC 4 cut(s) 8, 72, 274, 973
ApeKI GCWGC 1 cut(s) 1039
ApoI RAATTY 4 cut(s) 101, 590, 625, 1021
ArsI GACNNNNNNTTYG 2 cut(s) 121, 153
Asp700I GAANNNNTTC 1 cut(s) 306
AsuHPI GGTGA 2 cut(s) 517, 833
AsuII TTCGAA 1 cut(s) 574
BanII GRGCYC 2 cut(s) 684, 882
BbsI GAAGAC 3 cut(s) 330, 363, 1005
Bbv12I GWGCWC 2 cut(s) 882, 915
BbvI GCAGC 1 cut(s) 1051
BccI CCATC 3 cut(s) 396, 1141, 1269
BcgI CGANNNNNNTGC 4 cut(s) 509, 543, 1251, 1285
BciT130I CCWGG 1 cut(s) 695
BclI TGATCA 1 cut(s) 582
BcuI ACTAGT 1 cut(s) 664
BfaI CTAG 5 cut(s) 476, 656, 665, 704, 1088
BisI GCNGC 2 cut(s) 643, 1040
BlsI GCNGC 2 cut(s) 644, 1041
Bme1390I CCNGG 1 cut(s) 695
BmgBI CACGTC 1 cut(s) 712
BmiI GGNNCC 1 cut(s) 681
BmrFI CCNGG 1 cut(s) 695
BmsI GCATC 3 cut(s) 69, 118, 818
BpiI GAAGAC 3 cut(s) 330, 363, 1005
Bpu14I TTCGAA 1 cut(s) 574
BsaBI GATNNNNATC 1 cut(s) 1279
Bsc4I CCNNNNNNNGG 1 cut(s) 982
Bse118I RCCGGY 1 cut(s) 10
Bse1I ACTGG 1 cut(s) 369
Bse3DI GCAATG 3 cut(s) 514, 1082, 1147
Bse8I GATNNNNATC 1 cut(s) 1279
BseBI CCWGG 1 cut(s) 695
BseGI GGATG 3 cut(s) 407, 418, 809
BseJI GATNNNNATC 1 cut(s) 1279
BseLI CCNNNNNNNGG 1 cut(s) 982
BseMI GCAATG 3 cut(s) 514, 1082, 1147
BseMII CTCAG 2 cut(s) 324, 1106
BseNI ACTGG 1 cut(s) 369
BseXI GCAGC 1 cut(s) 1051
BsgI GTGCAG 1 cut(s) 341
BshFI GGCC 4 cut(s) 10, 74, 276, 975
BsiHKAI GWGCWC 2 cut(s) 882, 915
BsiSI CCGG 1 cut(s) 11
BslI CCNNNNNNNGG 1 cut(s) 982
BsmI GAATGC 2 cut(s) 637, 896
BsnI GGCC 4 cut(s) 10, 74, 276, 975
Bsp119I TTCGAA 1 cut(s) 574
Bsp1286I GDGCHC 3 cut(s) 684, 882, 915
Bsp143I GATC 3 cut(s) 234, 582, 1030
BspACI CCGC 2 cut(s) 4, 643
BspANI GGCC 4 cut(s) 10, 74, 276, 975
BspCNI CTCAG 2 cut(s) 325, 1107
BspLI GGNNCC 1 cut(s) 681
BspPI GGATC 1 cut(s) 1038
BspQI GCTCTTC 2 cut(s) 411, 887
BspT104I TTCGAA 1 cut(s) 574
BsrDI GCAATG 3 cut(s) 514, 1082, 1147
BsrFI RCCGGY 1 cut(s) 10
BsrI ACTGG 1 cut(s) 369
BssAI RCCGGY 1 cut(s) 10
BssMI GATC 3 cut(s) 234, 582, 1030
Bst2UI CCWGG 1 cut(s) 695
Bst4CI ACNGT 3 cut(s) 269, 433, 541
Bst6I CTCTTC 3 cut(s) 411, 503, 887
BstBI TTCGAA 1 cut(s) 574
BstC8I GCNNGC 1 cut(s) 12
BstDEI CTNAG 2 cut(s) 333, 1115
BstF5I GGATG 3 cut(s) 407, 418, 809
BstKTI GATC 3 cut(s) 237, 585, 1033
BstMBI GATC 3 cut(s) 234, 582, 1030
BstMWI GCNNNNNNNGC 3 cut(s) 16, 992, 1201
BstNI CCWGG 1 cut(s) 695
BstNSI RCATGY 1 cut(s) 118
BstSCI CCNGG 1 cut(s) 693
BstV1I GCAGC 1 cut(s) 1051
BstV2I GAAGAC 3 cut(s) 330, 363, 1005
BstXI CCANNNNNNTGG 1 cut(s) 959
BsuRI GGCC 4 cut(s) 10, 74, 276, 975
BtrI CACGTC 1 cut(s) 712
BtsCI GGATG 3 cut(s) 407, 418, 809
Cac8I GCNNGC 1 cut(s) 12
Cfr10I RCCGGY 1 cut(s) 10
CsiI ACCWGGT 1 cut(s) 693
Csp6I GTAC 1 cut(s) 265
CviAII CATG 7 cut(s) 115, 409, 451, 531, 586, 637, 836
CviQI GTAC 1 cut(s) 265
DdeI CTNAG 2 cut(s) 333, 1115
DpnI GATC 3 cut(s) 236, 584, 1032
DpnII GATC 3 cut(s) 234, 582, 1030
Eam1104I CTCTTC 3 cut(s) 411, 503, 887
EarI CTCTTC 3 cut(s) 411, 503, 887
Ecl136II GAGCTC 1 cut(s) 880
Eco147I AGGCCT 1 cut(s) 975
Eco24I GRGCYC 2 cut(s) 684, 882
Eco32I GATATC 1 cut(s) 91
Eco53kI GAGCTC 1 cut(s) 880
Eco57I CTGAAG 2 cut(s) 47, 321
EcoICRI GAGCTC 1 cut(s) 880
EcoRI GAATTC 3 cut(s) 101, 590, 1021
EcoRII CCWGG 1 cut(s) 693
EcoRV GATATC 1 cut(s) 91
EcoT22I ATGCAT 1 cut(s) 532
EcoT38I GRGCYC 2 cut(s) 684, 882
FaeI CATG 7 cut(s) 118, 412, 454, 534, 589, 640, 839
FatI CATG 7 cut(s) 114, 408, 450, 530, 585, 636, 835
FauNDI CATATG 1 cut(s) 1068
FbaI TGATCA 1 cut(s) 582
FblI GTMKAC 1 cut(s) 564
Fnu4HI GCNGC 2 cut(s) 643, 1040
FokI GGATG 3 cut(s) 414, 425, 796
FriOI GRGCYC 2 cut(s) 684, 882
Fsp4HI GCNGC 2 cut(s) 643, 1040
FspBI CTAG 5 cut(s) 476, 656, 665, 704, 1088
GluI GCNGC 2 cut(s) 643, 1040
HaeIII GGCC 4 cut(s) 10, 74, 276, 975
HapII CCGG 1 cut(s) 11
Hin1II CATG 7 cut(s) 118, 412, 454, 534, 589, 640, 839
HincII GTYRAC 2 cut(s) 565, 670
HindII GTYRAC 2 cut(s) 565, 670
HindIII AAGCTT 1 cut(s) 577
HinfI GANTC 4 cut(s) 136, 256, 335, 1300
HpaI GTTAAC 1 cut(s) 670
HpaII CCGG 1 cut(s) 11
HphI GGTGA 2 cut(s) 517, 833
Hpy166II GTNNAC 4 cut(s) 565, 670, 841, 926
Hpy188I TCNGA 5 cut(s) 65, 135, 301, 770, 1299
Hpy188III TCNNGA 4 cut(s) 248, 462, 704, 755
Hpy8I GTNNAC 4 cut(s) 565, 670, 841, 926
HpyAV CCTTC 7 cut(s) 22, 371, 499, 601, 986, 1220, 1240
HpyCH4III ACNGT 3 cut(s) 269, 433, 541
HpyCH4IV ACGT 3 cut(s) 196, 551, 711
HpyCH4V TGCA 8 cut(s) 109, 206, 322, 530, 623, 888, 1050, 1272
HpyF10VI GCNNNNNNNGC 3 cut(s) 16, 992, 1201
HpyF3I CTNAG 2 cut(s) 333, 1115
HpySE526I ACGT 3 cut(s) 196, 551, 711
Hsp92II CATG 7 cut(s) 118, 412, 454, 534, 589, 640, 839
KroI GCCGGC 1 cut(s) 10
KroNI GCCGGC 1 cut(s) 12
Ksp22I TGATCA 1 cut(s) 582
KspAI GTTAAC 1 cut(s) 670
Kzo9I GATC 3 cut(s) 234, 582, 1030
LguI GCTCTTC 2 cut(s) 411, 887
LmnI GCTCC 3 cut(s) 287, 679, 877
Lsp1109I GCAGC 1 cut(s) 1051
LweI GCATC 3 cut(s) 69, 118, 818
MabI ACCWGGT 1 cut(s) 693
MaeI CTAG 5 cut(s) 476, 656, 665, 704, 1088
MaeII ACGT 3 cut(s) 196, 551, 711
MaeIII GTNAC 4 cut(s) 213, 660, 784, 1253
MalI GATC 3 cut(s) 236, 584, 1032
MboI GATC 3 cut(s) 234, 582, 1030
MfeI CAATTG 1 cut(s) 1139
MhlI GDGCHC 3 cut(s) 684, 882, 915
MlyI GAGTC 2 cut(s) 145, 344
MmeI TCCRAC 2 cut(s) 113, 940
MnlI CCTC 9 cut(s) 144, 204, 246, 449, 504, 862, 965, 990, 1166
Mph1103I ATGCAT 1 cut(s) 532
MroNI GCCGGC 1 cut(s) 10
MroXI GAANNNNTTC 1 cut(s) 306
MseI TTAA 3 cut(s) 669, 944, 1191
MslI CAYNNNNRTG 1 cut(s) 117
MspI CCGG 1 cut(s) 11
MspR9I CCNGG 1 cut(s) 695
MunI CAATTG 1 cut(s) 1139
Mva1269I GAATGC 2 cut(s) 637, 896
MvaI CCWGG 1 cut(s) 695
MwoI GCNNNNNNNGC 3 cut(s) 16, 992, 1201
NaeI GCCGGC 1 cut(s) 12
NdeI CATATG 1 cut(s) 1068
NdeII GATC 3 cut(s) 234, 582, 1030
NgoMIV GCCGGC 1 cut(s) 10
NlaIII CATG 7 cut(s) 118, 412, 454, 534, 589, 640, 839
NlaIV GGNNCC 1 cut(s) 681
NmuCI GTSAC 1 cut(s) 1253
NsiI ATGCAT 1 cut(s) 532
NspI RCATGY 1 cut(s) 118
NspV TTCGAA 1 cut(s) 574
PceI AGGCCT 1 cut(s) 975
PciI ACATGT 1 cut(s) 114
PciSI GCTCTTC 2 cut(s) 411, 887
PctI GAATGC 2 cut(s) 637, 896
PdiI GCCGGC 1 cut(s) 12
PdmI GAANNNNTTC 1 cut(s) 306
PfeI GAWTC 2 cut(s) 256, 1300
PkrI GCNGC 2 cut(s) 644, 1041
PleI GAGTC 2 cut(s) 144, 343
PpsI GAGTC 2 cut(s) 144, 343
PscI ACATGT 1 cut(s) 114
Psp124BI GAGCTC 1 cut(s) 882
Psp6I CCWGG 1 cut(s) 693
PspGI CCWGG 1 cut(s) 693
PspN4I GGNNCC 1 cut(s) 681
RsaI GTAC 1 cut(s) 266
RsaNI GTAC 1 cut(s) 265
RseI CAYNNNNRTG 1 cut(s) 117
SacI GAGCTC 1 cut(s) 882
SalI GTCGAC 1 cut(s) 563
SapI GCTCTTC 2 cut(s) 411, 887
SaqAI TTAA 3 cut(s) 669, 944, 1191
SatI GCNGC 2 cut(s) 643, 1040
Sau3AI GATC 3 cut(s) 234, 582, 1030
SchI GAGTC 2 cut(s) 145, 344
ScrFI CCNGG 1 cut(s) 695
SduI GDGCHC 3 cut(s) 684, 882, 915
SexAI ACCWGGT 1 cut(s) 693
SfaNI GCATC 3 cut(s) 69, 118, 818
SfuI TTCGAA 1 cut(s) 574
SmiMI CAYNNNNRTG 1 cut(s) 117
SpeI ACTAGT 1 cut(s) 664
SseBI AGGCCT 1 cut(s) 975
SsiI CCGC 2 cut(s) 4, 643
SspMI CTAG 5 cut(s) 476, 656, 665, 704, 1088
SstI GAGCTC 1 cut(s) 882
StuI AGGCCT 1 cut(s) 975
StyD4I CCNGG 1 cut(s) 693
TaaI ACNGT 3 cut(s) 269, 433, 541
TaiI ACGT 3 cut(s) 199, 554, 714
TaqI TCGA 5 cut(s) 139, 564, 574, 775, 793
TauI GCSGC 1 cut(s) 645
TfiI GAWTC 2 cut(s) 256, 1300
Tru1I TTAA 3 cut(s) 669, 944, 1191
Tru9I TTAA 3 cut(s) 669, 944, 1191
TseFI GTSAC 1 cut(s) 1253
TseI GCWGC 1 cut(s) 1039
Tsp45I GTSAC 1 cut(s) 1253
TspDTI ATGAA 5 cut(s) 114, 337, 429, 513, 1071
TspGWI ACGGA 1 cut(s) 1293
XapI RAATTY 4 cut(s) 101, 590, 625, 1021
XbaI TCTAGA 1 cut(s) 703
XceI RCATGY 1 cut(s) 118
XcmI CCANNNNNNNNNTGG 3 cut(s) 183, 691, 1024
XmiI GTMKAC 1 cut(s) 564
XmnI GAANNNNTTC 1 cut(s) 306
XspI CTAG 5 cut(s) 476, 656, 665, 704, 1088
Zsp2I ATGCAT 1 cut(s) 532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.