Rmu_sc0017459.1_g000009

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017459.1
Physical Location & Seq
Forward (+)
36053 .. 39532
3480 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017459.1_g000009.1.cds

Sequence Viewer

Length: 3009 bp
atgggaaggagactgatcactggtagcatattacaagttagaagtgttggtcaagggttcttctgtgagctctcatatcttatcaaaaagatccatcaatacttgagagatcgagtatacggactgaaggctaagatggcctcatctgtaacagacctcttagcctcatctgtaacagacctcttaattggaaaacttgcgacgattcttgagaacgaaggaacagccatagctggtgttcgtgatgaagttgataaggttaaggaggagcttcaaagcatgaaagcattcctagtggatgcggaggccaacacagggaaaactgaaggagagaaactgtgggttgcaagaatcagagacttagcctatgatgttgaagatatcattgatgaattcatgtatcacatgtatgagaagcaaagtgggggtcgacttagaagggggctacacaaaaccattcgcgctccacgcaatctttggttcaggcataaaattgcaaagaagttgcagaaaattactgaaatgatcaaagtcaacccagagaggaatcaaagatacggtgttggccttgtaggaggagcaactacatctgaagatattcacaaattggtgcagagccaagctgagtcttcgtttttcattatggaagacgaactggttgggattgaaggcaagaagcaaatactaatgggatggctcatagatgaagagcaacaccaaactgttatatctgtggttggcatgggaggttctggaaagacaactctagttgccaagaccttcaacagtgaaagggtgaagagacatttcgattgttatgcatggattaccgtttcccaaacttataatgtggcacacttgtttcgaagcttgatcaaggaattctacaaatcaaggaaggcagagtgctgtgcaaatttgaatgccatgagccgcacagaattgatagagttactaattaactacttggagtccaacaaatacctggttgtactagatgacgtgtgggatataaaagtctggagagaaataaaggtatcacttcaagataggcaactcagaagtcgaatcataattacaactcgaaaagaagaggtagcagccaattcttttggagtgaaaagccatgttcaccgtattgaacccctgctaaagaatgaggctttggagctcttctgcaaaaaagcattctcatctaatgagcacaaaacttgtccacctgattttgtgtcattaacttgccaacttgttgcaaagtgtagaggccttcctctggctattgtggctttaggtggtcttatgtcttccaagaattcgctggatcaatggcagcaagtctgcaacagtttgaattggcatctggataacaattcattgctggaccccgtgaaaaacatcttgttgctgagtttcaatgatttgccatctcaattgaaacattgcttcctctattgttctcttttcccagaagattttgtaattaagagaaaagggctcattagattgtggatagccgaaggatttgttgaaaatgtgaaagggatcacacccgaagaagttgcagacggttatctttgggaactttgcttccgtagcatgttacaagttgttgagagaaatgtaacaggaaggccgagaaaagttaagatgcatgatctgatgcgagagcttgctttgttgacagccgagaaggaaaagtttggtcatgtatacgatgggagagaagtaatggaagagatctcaacccgtcgcttgtcaattcacaaaatggaaggagaaattaaatcatggccgggtatgtcaaagattcgttctcttcttgtatttgcaactgacatgtcctcatcgtctttctcaaatgcactggtttctcgattcaaattgttgaggaccctagacttggagggtgtccaaattgataaactgccggatgcagttgttgacttgttcaacttgagatacttaaatttgaggtacactttaatcgaggaacttccagagtccatagggcgtctccgcaaccttcaatttttgaaaatcgagaacaccaagataaaggcacttccactaggaattgcaaagttgctgaacctgcgctatctgactatgtatagcggctctggaaatagtacggaattcaaatgtgcgagtgggacaagtgcgccatcaaatatttgtcagttggagaaattgcattgtttatcaatgattgaatcagaaggggacactattaaacttatcggcaacatgactcaactcaggttcatcggcatatcgaatgtgaaagaaagagatgagattgaccttcgggtttcaattaagaagataactctgcttcaaactttggttttaatggcaagtaatgaagaggaaatccttccggtgaaagcacaatttccatctcttccgcaccttaaaaggcttcaattgattggcagactgcaaaacgtaataccttggttttcttcactgcatagcctcacatctctgtttctgcattggtcaagacttgaagacgatgtactgcctcaaattgaagcactgcccaatctgacatggcttcgtctttgtaatacatatgttggggaagagttgtgtttccgcagagactttgtaaagctggagaggttgcaattgtggaaatttgcctcggtgaaaaagattactatagaaaaaggggtgatgccaaatctccagatcttatgggttgtacagttcatggaattgaagacaatgccactaggccttgaatacctttctaatctacaaactttgcaactgagggatgtccctatggaagttataaagcccattcggaaagaaggtgcggatcggtctacgaaaacttggcgtagtgtttctttctcctgccagaatcaatcaagcccgagaagtattgaacaagatttgagtttgatgaagactcctttctgtacgtgtgggaagatgcaaggattgatctcagttttcatatgcctctttcttttaccaaaattgaataatacataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1002

Amino Acids

114.65

Weight (kDa)

9.02

Isoelectric Point (pI)

50.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 846, 2804
Acc36I ACCTGC 1 cut(s) 2100
AccI GTMKAC 4 cut(s) 117, 430, 1710, 2837
AccII CGCG 1 cut(s) 462
AciI CCGC 7 cut(s) 302, 934, 2017, 2115, 2408, 2602, 2828
AclWI GGATC 4 cut(s) 85, 1329, 1550, 2838
AcoI YGGCCR 1 cut(s) 1790
AcsI RAATTY 7 cut(s) 392, 881, 916, 1312, 1966, 2135, 2642
AcuI CTGAAG 3 cut(s) 146, 345, 612
AcyI GRCGYC 1 cut(s) 2011
AfaI GTAC 6 cut(s) 993, 1976, 2131, 2523, 2712, 2935
AfiI CCNNNNNNNGG 3 cut(s) 315, 1273, 1900
AflIII ACRYGT 4 cut(s) 405, 1002, 1836, 2936
AjiI CACGTC 1 cut(s) 1003
AjnI CCWGG 1 cut(s) 984
AjuI GAANNNNNNNTTGG 2 cut(s) 1148, 1180
AloI GAACNNNNNNTCC 2 cut(s) 1572, 1604
AluBI AGCT 8 cut(s) 70, 233, 271, 623, 870, 1171, 1669, 2620
AluI AGCT 8 cut(s) 70, 233, 271, 623, 870, 1171, 1669, 2620
Alw21I GWGCWC 3 cut(s) 72, 1173, 1206
Alw26I GTCTC 5 cut(s) 4, 351, 796, 2018, 2601
AlwI GGATC 4 cut(s) 85, 1329, 1550, 2838
Ama87I CYCGRG 1 cut(s) 2887
AoxI GGCC 7 cut(s) 138, 306, 565, 1264, 1631, 1790, 2743
ApeKI GCWGC 2 cut(s) 1100, 1330
ApoI RAATTY 7 cut(s) 392, 881, 916, 1312, 1966, 2135, 2642
ArsI GACNNNNNNTTYG 2 cut(s) 412, 444
Asp700I GAANNNNTTC 3 cut(s) 287, 597, 2376
AspLEI GCGC 3 cut(s) 464, 2097, 2164
AspS9I GGNCC 2 cut(s) 1381, 1890
AsuC2I CCSGG 1 cut(s) 1794
AsuHPI GGTGA 5 cut(s) 808, 1124, 2395, 2665, 2692
AsuII TTCGAA 1 cut(s) 865
AvaI CYCGRG 1 cut(s) 2887
AvaII GGWCC 2 cut(s) 1381, 1890
BanII GRGCYC 3 cut(s) 72, 1173, 1497
BarI GAAGNNNNNNTAC 2 cut(s) 2505, 2537
BbsI GAAGAC 6 cut(s) 621, 654, 1296, 2520, 2735, 2927
Bbv12I GWGCWC 3 cut(s) 72, 1173, 1206
BbvI GCAGC 2 cut(s) 1112, 1342
BccI CCATC 7 cut(s) 102, 130, 687, 1432, 1709, 2173, 2407
BcgI CGANNNNNNTGC 4 cut(s) 800, 834, 1541, 1575
BciT130I CCWGG 1 cut(s) 986
BclI TGATCA 3 cut(s) 15, 525, 873
BcnI CCSGG 1 cut(s) 1794
BcoDI GTCTC 5 cut(s) 4, 351, 796, 2018, 2601
BfaI CTAG 6 cut(s) 293, 767, 995, 1895, 2069, 2741
BfmI CTRYAG 1 cut(s) 2667
BfuAI ACCTGC 1 cut(s) 2100
BglII AGATCT 2 cut(s) 1737, 2697
BisI GCNGC 4 cut(s) 934, 1101, 1331, 2116
BlsI GCNGC 4 cut(s) 935, 1102, 1332, 2117
Bme1390I CCNGG 2 cut(s) 986, 1794
Bme18I GGWCC 2 cut(s) 1381, 1890
BmeT110I CYCGRG 1 cut(s) 2887
BmgBI CACGTC 1 cut(s) 1003
BmgT120I GGNCC 2 cut(s) 1381, 1890
BmiI GGNNCC 2 cut(s) 1383, 1892
BmrFI CCNGG 2 cut(s) 986, 1794
BmsI GCATC 7 cut(s) 289, 1366, 1638, 1650, 1921, 2673, 2937
BpiI GAAGAC 6 cut(s) 621, 654, 1296, 2520, 2735, 2927
BpmI CTGGAG 3 cut(s) 1042, 2642, 2678
Bpu14I TTCGAA 1 cut(s) 865
BpuEI CTTGAG 3 cut(s) 124, 230, 1975
BpuMI CCSGG 1 cut(s) 1794
BsaAI YACGTR 1 cut(s) 2937
BsaHI GRCGYC 1 cut(s) 2011
BsaJI CCNNGG 2 cut(s) 2456, 2649
BsaWI WCCGGW 1 cut(s) 2380
Bsc4I CCNNNNNNNGG 3 cut(s) 315, 1273, 1900
Bse1I ACTGG 3 cut(s) 25, 660, 1869
Bse3DI GCAATG 2 cut(s) 1373, 1438
BseBI CCWGG 1 cut(s) 986
BseDI CCNNGG 2 cut(s) 2456, 2649
BseGI GGATG 4 cut(s) 304, 698, 1936, 2791
BseLI CCNNNNNNNGG 3 cut(s) 315, 1273, 1900
BseMI GCAATG 2 cut(s) 1373, 1438
BseMII CTCAG 6 cut(s) 615, 1072, 1397, 2272, 2771, 2976
BseNI ACTGG 3 cut(s) 25, 660, 1869
BseRI GAGGAG 2 cut(s) 281, 591
BseXI GCAGC 2 cut(s) 1112, 1342
BsgI GTGCAG 1 cut(s) 632
Bsh1236I CGCG 1 cut(s) 462
BshFI GGCC 7 cut(s) 140, 308, 567, 1266, 1633, 1792, 2745
BsiHKAI GWGCWC 3 cut(s) 72, 1173, 1206
BsiHKCI CYCGRG 1 cut(s) 2887
BsiSI CCGG 3 cut(s) 1793, 1928, 2381
BslFI GGGAC 3 cut(s) 2167, 2237, 2774
BslI CCNNNNNNNGG 3 cut(s) 315, 1273, 1900
BsmAI GTCTC 5 cut(s) 4, 351, 796, 2018, 2601
BsmBI CGTCTC 1 cut(s) 2018
BsmFI GGGAC 3 cut(s) 2167, 2237, 2774
BsmI GAATGC 3 cut(s) 287, 928, 1187
BsnI GGCC 7 cut(s) 140, 308, 567, 1266, 1633, 1792, 2745
BsoBI CYCGRG 1 cut(s) 2887
Bsp119I TTCGAA 1 cut(s) 865
Bsp1286I GDGCHC 4 cut(s) 72, 1173, 1206, 1497
Bsp1407I TGTACA 1 cut(s) 2710
BspACI CCGC 7 cut(s) 302, 934, 2017, 2115, 2408, 2602, 2828
BspANI GGCC 7 cut(s) 140, 308, 567, 1266, 1633, 1792, 2745
BspCNI CTCAG 6 cut(s) 616, 1071, 1398, 2271, 2772, 2975
BspFNI CGCG 1 cut(s) 462
BspLI GGNNCC 2 cut(s) 1383, 1892
BspMI ACCTGC 1 cut(s) 2100
BspPI GGATC 4 cut(s) 85, 1329, 1550, 2838
BspQI GCTCTTC 2 cut(s) 702, 1178
BspT104I TTCGAA 1 cut(s) 865
BsrDI GCAATG 2 cut(s) 1373, 1438
BsrGI TGTACA 1 cut(s) 2710
BsrI ACTGG 3 cut(s) 25, 660, 1869
BssECI CCNNGG 2 cut(s) 2456, 2649
BssNAI GTATAC 2 cut(s) 118, 1711
BssNI GRCGYC 1 cut(s) 2011
BssT1I CCWWGG 1 cut(s) 2456
Bst1107I GTATAC 2 cut(s) 118, 1711
Bst2UI CCWGG 1 cut(s) 986
Bst4CI ACNGT 9 cut(s) 339, 560, 724, 788, 832, 1136, 1346, 1568, 2715
Bst6I CTCTTC 9 cut(s) 702, 794, 1086, 1178, 1728, 1821, 2361, 2409, 2583
BstACI GRCGYC 1 cut(s) 2011
BstAUI TGTACA 1 cut(s) 2710
BstBAI YACGTR 1 cut(s) 2937
BstBI TTCGAA 1 cut(s) 865
BstC8I GCNNGC 1 cut(s) 1671
BstF5I GGATG 4 cut(s) 304, 698, 1936, 2791
BstFNI CGCG 1 cut(s) 462
BstHHI GCGC 3 cut(s) 464, 2097, 2164
BstMAI GTCTC 5 cut(s) 4, 351, 796, 2018, 2601
BstMWI GCNNNNNNNGC 5 cut(s) 137, 468, 1283, 1593, 2092
BstNI CCWGG 1 cut(s) 986
BstNSI RCATGY 3 cut(s) 409, 1600, 1840
BstSCI CCNGG 2 cut(s) 984, 1792
BstSFI CTRYAG 1 cut(s) 2667
BstUI CGCG 1 cut(s) 462
BstV1I GCAGC 2 cut(s) 1112, 1342
BstV2I GAAGAC 6 cut(s) 621, 654, 1296, 2520, 2735, 2927
BstX2I RGATCY 3 cut(s) 90, 1737, 2697
BstYI RGATCY 3 cut(s) 90, 1737, 2697
BstZ17I GTATAC 2 cut(s) 118, 1711
BsuRI GGCC 7 cut(s) 140, 308, 567, 1266, 1633, 1792, 2745
BtrI CACGTC 1 cut(s) 1003
BtsCI GGATG 4 cut(s) 304, 698, 1936, 2791
BtsI GCAGTG 2 cut(s) 2468, 2540
BtsIMutI CAGTG 5 cut(s) 18, 793, 1862, 2468, 2540
BveI ACCTGC 1 cut(s) 2100
Cac8I GCNNGC 1 cut(s) 1671
CfoI GCGC 3 cut(s) 464, 2097, 2164
Cfr13I GGNCC 2 cut(s) 1381, 1890
CseI GACGC 1 cut(s) 2000
CsiI ACCWGGT 1 cut(s) 984
Csp6I GTAC 6 cut(s) 992, 1975, 2130, 2522, 2711, 2934
CviQI GTAC 6 cut(s) 992, 1975, 2130, 2522, 2711, 2934
EaeI YGGCCR 1 cut(s) 1790
Eam1104I CTCTTC 9 cut(s) 702, 794, 1086, 1178, 1728, 1821, 2361, 2409, 2583
EarI CTCTTC 9 cut(s) 702, 794, 1086, 1178, 1728, 1821, 2361, 2409, 2583
Ecl136II GAGCTC 2 cut(s) 70, 1171
Eco130I CCWWGG 1 cut(s) 2456
Eco147I AGGCCT 2 cut(s) 1266, 2745
Eco24I GRGCYC 3 cut(s) 72, 1173, 1497
Eco32I GATATC 1 cut(s) 382
Eco47I GGWCC 2 cut(s) 1381, 1890
Eco53kI GAGCTC 2 cut(s) 70, 1171
Eco57I CTGAAG 3 cut(s) 146, 345, 612
Eco88I CYCGRG 1 cut(s) 2887
EcoICRI GAGCTC 2 cut(s) 70, 1171
EcoO109I RGGNCCY 1 cut(s) 1890
EcoRI GAATTC 4 cut(s) 392, 881, 1312, 2135
EcoRII CCWGG 1 cut(s) 984
EcoRV GATATC 1 cut(s) 382
EcoT14I CCWWGG 1 cut(s) 2456
EcoT22I ATGCAT 2 cut(s) 823, 1653
EcoT38I GRGCYC 3 cut(s) 72, 1173, 1497
ErhI CCWWGG 1 cut(s) 2456
Esp3I CGTCTC 1 cut(s) 2018
FaqI GGGAC 3 cut(s) 2167, 2237, 2774
FauNDI CATATG 2 cut(s) 2578, 2972
FbaI TGATCA 3 cut(s) 15, 525, 873
FblI GTMKAC 4 cut(s) 117, 430, 1710, 2837
Fnu4HI GCNGC 4 cut(s) 934, 1101, 1331, 2116
FokI GGATG 4 cut(s) 311, 705, 1943, 2798
FriOI GRGCYC 3 cut(s) 72, 1173, 1497
Fsp4HI GCNGC 4 cut(s) 934, 1101, 1331, 2116
FspBI CTAG 6 cut(s) 293, 767, 995, 1895, 2069, 2741
GlaI GCGC 3 cut(s) 463, 2096, 2163
GluI GCNGC 4 cut(s) 934, 1101, 1331, 2116
GsuI CTGGAG 3 cut(s) 1042, 2642, 2678
HaeIII GGCC 7 cut(s) 140, 308, 567, 1266, 1633, 1792, 2745
HapII CCGG 3 cut(s) 1793, 1928, 2381
HgaI GACGC 1 cut(s) 2000
HhaI GCGC 3 cut(s) 464, 2097, 2164
Hin1I GRCGYC 1 cut(s) 2011
Hin6I GCGC 3 cut(s) 462, 2095, 2162
HinP1I GCGC 3 cut(s) 462, 2095, 2162
HincII GTYRAC 4 cut(s) 431, 535, 1680, 1942
HindII GTYRAC 4 cut(s) 431, 535, 1680, 1942
HindIII AAGCTT 1 cut(s) 868
HpaII CCGG 3 cut(s) 1793, 1928, 2381
HphI GGTGA 5 cut(s) 808, 1124, 2395, 2665, 2692
Hpy188I TCNGA 8 cut(s) 356, 592, 1061, 1659, 2103, 2218, 2553, 2817
Hpy99I CGWCG 2 cut(s) 205, 1752
HpyCH4III ACNGT 9 cut(s) 339, 560, 724, 788, 832, 1136, 1346, 1568, 2715
HpyCH4IV ACGT 3 cut(s) 1002, 2448, 2936
HpyF10VI GCNNNNNNNGC 5 cut(s) 137, 468, 1283, 1593, 2092
HpySE526I ACGT 3 cut(s) 1002, 2448, 2936
Hsp92I GRCGYC 1 cut(s) 2011
HspAI GCGC 3 cut(s) 462, 2095, 2162
Ksp22I TGATCA 3 cut(s) 15, 525, 873
LguI GCTCTTC 2 cut(s) 702, 1178
LmnI GCTCC 4 cut(s) 268, 469, 578, 1168
Lsp1109I GCAGC 2 cut(s) 1112, 1342
LweI GCATC 7 cut(s) 289, 1366, 1638, 1650, 1921, 2673, 2937
MabI ACCWGGT 1 cut(s) 984
MaeI CTAG 6 cut(s) 293, 767, 995, 1895, 2069, 2741
MaeII ACGT 3 cut(s) 1002, 2448, 2936
MaeIII GTNAC 5 cut(s) 148, 172, 951, 1599, 1621
MfeI CAATTG 3 cut(s) 1430, 2426, 2633
MflI RGATCY 3 cut(s) 90, 1737, 2697
MhlI GDGCHC 4 cut(s) 72, 1173, 1206, 1497
MlyI GAGTC 5 cut(s) 635, 980, 2009, 2245, 2917
MmeI TCCRAC 2 cut(s) 999, 2163
Mph1103I ATGCAT 2 cut(s) 823, 1653
MroXI GAANNNNTTC 3 cut(s) 287, 597, 2376
MslI CAYNNNNRTG 1 cut(s) 408
MspI CCGG 3 cut(s) 1793, 1928, 2381
MspR9I CCNGG 2 cut(s) 986, 1794
MunI CAATTG 3 cut(s) 1430, 2426, 2633
Mva1269I GAATGC 3 cut(s) 287, 928, 1187
MvaI CCWGG 1 cut(s) 986
MvnI CGCG 1 cut(s) 462
MwoI GCNNNNNNNGC 5 cut(s) 137, 468, 1283, 1593, 2092
NciI CCSGG 1 cut(s) 1794
NdeI CATATG 2 cut(s) 2578, 2972
NlaIV GGNNCC 2 cut(s) 1383, 1892
NmeAIII GCCGAG 2 cut(s) 1659, 1711
NsiI ATGCAT 2 cut(s) 823, 1653
NspI RCATGY 3 cut(s) 409, 1600, 1840
NspV TTCGAA 1 cut(s) 865
PceI AGGCCT 2 cut(s) 1266, 2745
PciI ACATGT 2 cut(s) 405, 1836
PciSI GCTCTTC 2 cut(s) 702, 1178
PctI GAATGC 3 cut(s) 287, 928, 1187
PdmI GAANNNNTTC 3 cut(s) 287, 597, 2376
PfeI GAWTC 8 cut(s) 205, 351, 547, 1068, 1807, 1875, 2213, 2875
PkrI GCNGC 4 cut(s) 935, 1102, 1332, 2117
PleI GAGTC 5 cut(s) 634, 979, 2008, 2245, 2917
PpsI GAGTC 5 cut(s) 634, 979, 2008, 2245, 2917
Ppu21I YACGTR 1 cut(s) 2937
PpuMI RGGWCCY 1 cut(s) 1890
PscI ACATGT 2 cut(s) 405, 1836
PsiI TTATAA 2 cut(s) 846, 2804
Psp124BI GAGCTC 2 cut(s) 72, 1173
Psp5II RGGWCCY 1 cut(s) 1890
Psp6I CCWGG 1 cut(s) 984
PspGI CCWGG 1 cut(s) 984
PspN4I GGNNCC 2 cut(s) 1383, 1892
PspPI GGNCC 2 cut(s) 1381, 1890
PspPPI RGGWCCY 1 cut(s) 1890
PsuI RGATCY 3 cut(s) 90, 1737, 2697
RsaI GTAC 6 cut(s) 993, 1976, 2131, 2523, 2712, 2935
RsaNI GTAC 6 cut(s) 992, 1975, 2130, 2522, 2711, 2934
RseI CAYNNNNRTG 1 cut(s) 408
SacI GAGCTC 2 cut(s) 72, 1173
SalI GTCGAC 1 cut(s) 429
SapI GCTCTTC 2 cut(s) 702, 1178
SatI GCNGC 4 cut(s) 934, 1101, 1331, 2116
Sau96I GGNCC 2 cut(s) 1381, 1890
SchI GAGTC 5 cut(s) 635, 980, 2009, 2245, 2917
ScrFI CCNGG 2 cut(s) 986, 1794
SduI GDGCHC 4 cut(s) 72, 1173, 1206, 1497
SexAI ACCWGGT 1 cut(s) 984
SfaNI GCATC 7 cut(s) 289, 1366, 1638, 1650, 1921, 2673, 2937
SfcI CTRYAG 1 cut(s) 2667
SfuI TTCGAA 1 cut(s) 865
SinI GGWCC 2 cut(s) 1381, 1890
SmiMI CAYNNNNRTG 1 cut(s) 408
SmlI CTYRAG 3 cut(s) 103, 209, 1954
SmoI CTYRAG 3 cut(s) 103, 209, 1954
SseBI AGGCCT 2 cut(s) 1266, 2745
SsiI CCGC 7 cut(s) 302, 934, 2017, 2115, 2408, 2602, 2828
SspI AATATT 1 cut(s) 2173
SspMI CTAG 6 cut(s) 293, 767, 995, 1895, 2069, 2741
SstI GAGCTC 2 cut(s) 72, 1173
StuI AGGCCT 2 cut(s) 1266, 2745
StyD4I CCNGG 2 cut(s) 984, 1792
StyI CCWWGG 1 cut(s) 2456
TaaI ACNGT 9 cut(s) 339, 560, 724, 788, 832, 1136, 1346, 1568, 2715
TaiI ACGT 3 cut(s) 1005, 2451, 2939
TaqII GACCGA 1 cut(s) 2823
TatI WGTACW 3 cut(s) 991, 2521, 2710
TauI GCSGC 2 cut(s) 936, 2118
TfiI GAWTC 8 cut(s) 205, 351, 547, 1068, 1807, 1875, 2213, 2875
TscAI CASTG 5 cut(s) 25, 793, 1869, 2475, 2547
TseI GCWGC 2 cut(s) 1100, 1330
TspGWI ACGGA 3 cut(s) 135, 1580, 2147
TspRI CASTG 5 cut(s) 25, 793, 1869, 2475, 2547
VpaK11BI GGWCC 2 cut(s) 1381, 1890
XapI RAATTY 7 cut(s) 392, 881, 916, 1312, 1966, 2135, 2642
XceI RCATGY 3 cut(s) 409, 1600, 1840
XcmI CCANNNNNNNNNTGG 3 cut(s) 474, 982, 1315
XmiI GTMKAC 4 cut(s) 117, 430, 1710, 2837
XmnI GAANNNNTTC 3 cut(s) 287, 597, 2376
XspI CTAG 6 cut(s) 293, 767, 995, 1895, 2069, 2741
Zsp2I ATGCAT 2 cut(s) 823, 1653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.