Prupe.8G010200_v2.0.a1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000110
Physical Location & Seq
Forward (+)
813732 .. 817121
3390 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G010200.1

Sequence Viewer

Length: 2754 bp
ATGGACTCAGCTCCAACAGCTCTCTTGGTTGGCAAAATTATGGACATTCTCGAGAACGAAGCATACTCCATAGCCGCTATCCGTGATGAAGTTGATGAGATTAAGCAGGAGCTGGTAAGCATGACATCCTTCCTAGAGGATGTTGAGGGCCAGAAAACACAGACAGAAACACAGAAAGCTTGGGTCACAAGTGTCAGAGACTTAACCAGTGATGTTGAAGATATCATCGATGAATTCATGTATCATACGTATGAGCAGCAAAGTAGGGGACGATTTGCAAGGTGGCTCCACAGGACCATCCATATTCCAAAGAATCTCTTCTATCGGCGTAAAATTGCCAACAAGTTACACAAAATCACTAAAATGATCAAGGCCATTCCAGAGAGAAATAAGAGATATGCTCTTGATGATGTAGTAGGAACAAGTTGGGATGATATTAGCAAATGGGTCAAGAACCAAGCAGTGTCTTCTCTCTTTATTAACGAAGATGAACTCGTCGGGATTGATGGAAAGAAGCAAACATTAACTGCATGGCTGCTCCATGAAGAGCAACACCTAACTGTTGTCTCCGTGGTCGGGATGGGAGGATCCGGGAAAACAACTCTAGTTGCCAAGACCTTCACCAACGAAACTATAAACAGACATTTTGATTCTTATGCTTGGATCACTGTCTCCCAAACTTATGTGATTGAAGACTTGTTTCGGAGCTTGATCAAAGAACTCCACCGAACAAGGAAAGAAGATGTCCCTGCAGACCTGATATCCATGAGCTACAGAGACTTGCTACAACTTCTGGTGAACTACCTGGAGTCTAAAAGGTACCTAGTAGTACTGGATGACGTGTGGGATATCAAACTTTGGAGAGAAATAAGGATAGCACTTCCAGATAGACAGCTTGGAAGTCGAATCATGCTTACAACTCGAAAAGAAGACATAGCATCCCATTGTTTTGGAGTTGAAAGCCATGTTCACTGTATGCAACCGCTGGAAAAGAATGATGCTTGGGAGCTTTTCAGCAGGAAATCATTCTCTACCTTTGATGGTAAATGTTGTCCACCAGAGCTTGAAAAATTAGCTTGGGAACTCATGGAAAAGTGTAAAGGCCTACCTCTAGCTATCATAGCTTTAGGTGGTCTTATGTCTTCCAAGAAATCAGCTGCGGAGTGGAGTAAAGTCTACAATGGCTTAAACTGGCATCTAACAAGCCATCATTTGTTAGAGCCTGTGAAGAGCATCTTGTTACTTAGTTTCAATGATTTGCCATATCGCTTGAAGCATTGTTTTCTATATTGTTCCCTTTTTCCAGAAGATTATTTGATTCGAAGGAAAAGGCTCATTAGGTTATGGATAGCTGAAGGATTTGTTGAACATGCTAGAGGGGTCACACCTGAACAAGTTGCAGAGAGCTATCTTATGGAACTCATTTTTCGTAACATGCTACAAGTTGTAGAGAGGAATGAAACCGGTAGGCCAAAATCATGTAAGATGCATGACCTTATGCGAGAGCTTGCTCTGTCAACATCTGAGAAAGAAAAATTTTCTGTTGTATATGATGGGAAAGAAGTACTGGAAGACATTGGAGCCCACCGTTTGTCAATCCAAACAACCCAAGGAGGAATCAAATCTTGCATTGGTATGTCACGCCCTCGTTCTTGTCTTGTATTCGTTACTGGCATATTCTCATTTTCTTTCTCAAAGTCATTGCCTTCTGGATTCAAATTGTTGAGGGTTTTTGATTTGGAGGATGTCCAAATTGATAAGCTGCCACATAATTTAGTGTACTTATTCAACTTAAGATACTTAAGTTTGAAGGGAACTCAAATTAAGGAGCTTCCAAAAGCCATAGGACTGCTCCGCAACCTTCTGACATTGAACATCCTCAATACTAAGATCGAGGTACTTCCCAGAGGAATTTCCAAGTTGCTAAACCTGCGCCTTCTAATTATGCACCGTCGTACTGGAGAGTATATGGCCTTCAAAACTGCCCATGGGACAAGAGTGCCATTTAATATTAGTAAGCTGAAGAAATTGGAAGTTTTGTCATGTGTTGAATCAGAAGGAAACATTATAAGGCTCATTGGGAATATGACTCAACTTACAAGGATTGGCATTACGAATGTAAAAGAGAGAGACGCAATGGACCTATGTGATTCAATTCAAAAGTTGAAGCTACTTCAGTGCTTGGCTTTAAGGGTAAGTGGTGAGGAGGAGTTTCTTGACGTCAATGCATTATCTTCACCTCCTCCACACCTTCGAAAACTTATTTTTGGCAGCAAGCTGCAAAAGGTACCACCTTGGTTCTCTTCGCTCCAGAACCTTACATATCTGTATCTTCATTGGACGAGACTTGACGAGGATTTACTACCTCATATTGAAGCATTGCCATGTCTGGGAAGGCTTTTACTTGTCAATGCCTATGTTGGTAATGAGTTGTGTTTCAACAGAGGCTTTCCAAAGCTTACTATTCTGGAGTTGTTTAATTTCCCCTTATTGAATAAGATAACTATAGCAGAAGGGGTGATGAGGAATCTCCGGTTATTAACACTTGCTAGATGTATGGAGTTAAAGGCATTGCCACAGGGTTTTGAATACCTTAGTAAGCTAGAAACACTTGAATTGTTGTCTGTTTCAATGCAACTTATAGAGTCCATACAAGAAGGAGGGGTGGATCATCCAACGGTAAAACACATCACCGTCATTACAAATTATTCTTTGAAATGCTTGATAAGAGCTCATCATAGTTCATCCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

918

Amino Acids

105.3

Weight (kDa)

8.65

Isoelectric Point (pI)

42.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2069
AatII GACGTC 1 cut(s) 2223
Acc36I ACCTGC 1 cut(s) 1938
Acc65I GGTACC 2 cut(s) 819, 2287
AccB1I GGYRCC 2 cut(s) 819, 2287
AccI GTMKAC 1 cut(s) 1176
AciI CCGC 4 cut(s) 75, 983, 1160, 1855
AclWI GGATC 4 cut(s) 582, 595, 671, 2676
AcsI RAATTY 3 cut(s) 233, 1535, 1911
AcuI CTGAAG 3 cut(s) 1374, 2042, 2159
AcyI GRCGYC 1 cut(s) 2220
AfaI GTAC 7 cut(s) 821, 831, 1566, 1781, 1899, 1957, 2289
AfiI CCNNNNNNNGG 2 cut(s) 576, 2390
AflII CTTAAG 2 cut(s) 1792, 1801
AflIII ACRYGT 1 cut(s) 840
AgeI ACCGGT 1 cut(s) 1463
AjiI CACGTC 1 cut(s) 841
AjnI CCWGG 1 cut(s) 804
Alw21I GWGCWC 1 cut(s) 2734
Alw26I GTCTC 6 cut(s) 192, 571, 676, 771, 2124, 2338
AlwI GGATC 4 cut(s) 582, 595, 671, 2676
AlwNI CAGNNNCTG 1 cut(s) 112
Ama87I CYCGRG 1 cut(s) 50
AoxI GGCC 5 cut(s) 148, 372, 1102, 1469, 1971
ApeKI GCWGC 6 cut(s) 256, 535, 1157, 1762, 2271, 2278
ApoI RAATTY 3 cut(s) 233, 1535, 1911
AsiGI ACCGGT 1 cut(s) 1463
Asp700I GAANNNNTTC 2 cut(s) 317, 1025
Asp718I GGTACC 2 cut(s) 819, 2287
AspLEI GCGC 1 cut(s) 1935
AspS9I GGNCC 3 cut(s) 148, 294, 2140
AsuC2I CCSGG 1 cut(s) 592
AsuHPI GGTGA 6 cut(s) 613, 808, 2213, 2229, 2530, 2683
AsuII TTCGAA 2 cut(s) 1321, 2254
AvaI CYCGRG 1 cut(s) 50
AvaII GGWCC 2 cut(s) 294, 2140
BaeI ACNNNNGTAYC 2 cut(s) 1789, 1822
BamHI GGATCC 1 cut(s) 587
BanI GGYRCC 2 cut(s) 819, 2287
BanII GRGCYC 2 cut(s) 1585, 2734
BarI GAAGNNNNNNTAC 2 cut(s) 1958, 1990
BbsI GAAGAC 5 cut(s) 459, 699, 936, 1134, 1578
Bbv12I GWGCWC 1 cut(s) 2734
BbvI GCAGC 6 cut(s) 268, 522, 1144, 1749, 2265, 2283
BccI CCATC 6 cut(s) 305, 500, 574, 1034, 1215, 1547
BciT130I CCWGG 1 cut(s) 806
BclI TGATCA 2 cut(s) 366, 711
BcnI CCSGG 1 cut(s) 592
BcoDI GTCTC 6 cut(s) 192, 571, 676, 771, 2124, 2338
BfaI CTAG 7 cut(s) 134, 605, 824, 1112, 1374, 2550, 2603
BfmI CTRYAG 3 cut(s) 750, 772, 2505
BfrI CTTAAG 2 cut(s) 1792, 1801
BfuAI ACCTGC 1 cut(s) 1938
BisI GCNGC 7 cut(s) 75, 257, 536, 1158, 1763, 2272, 2279
BlsI GCNGC 7 cut(s) 76, 258, 537, 1159, 1764, 2273, 2280
BmcAI AGTACT 2 cut(s) 831, 1566
Bme1390I CCNGG 2 cut(s) 592, 806
Bme18I GGWCC 2 cut(s) 294, 2140
BmeT110I CYCGRG 1 cut(s) 50
BmgBI CACGTC 1 cut(s) 841
BmgT120I GGNCC 3 cut(s) 148, 294, 2140
BmiI GGNNCC 5 cut(s) 287, 589, 821, 1582, 2289
BmrFI CCNGG 2 cut(s) 592, 806
BmsI GCATC 5 cut(s) 947, 988, 1204, 1242, 1476
BpiI GAAGAC 5 cut(s) 459, 699, 936, 1134, 1578
BplI GAGNNNNNCTC 2 cut(s) 385, 417
BpmI CTGGAG 4 cut(s) 827, 1980, 2294, 2489
Bpu14I TTCGAA 2 cut(s) 1321, 2254
BpuMI CCSGG 1 cut(s) 592
Bsa29I ATCGAT 1 cut(s) 228
BsaAI YACGTR 1 cut(s) 249
BsaHI GRCGYC 1 cut(s) 2220
BsaJI CCNNGG 4 cut(s) 570, 1609, 1987, 2294
BsaWI WCCGGW 2 cut(s) 1463, 2532
Bsc4I CCNNNNNNNGG 2 cut(s) 576, 2390
Bse118I RCCGGY 1 cut(s) 1463
Bse1I ACTGG 6 cut(s) 207, 837, 1196, 1572, 1675, 1963
Bse3DI GCAATG 4 cut(s) 1700, 2142, 2378, 2570
BseBI CCWGG 1 cut(s) 806
BseCI ATCGAT 1 cut(s) 228
BseDI CCNNGG 4 cut(s) 570, 1609, 1987, 2294
BseLI CCNNNNNNNGG 2 cut(s) 576, 2390
BseMI GCAATG 4 cut(s) 1700, 2142, 2378, 2570
BseMII CTCAG 2 cut(s) 21, 1515
BseNI ACTGG 6 cut(s) 207, 837, 1196, 1572, 1675, 1963
BseRI GAGGAG 3 cut(s) 2219, 2222, 2232
BseXI GCAGC 6 cut(s) 268, 522, 1144, 1749, 2265, 2283
BshFI GGCC 5 cut(s) 150, 374, 1104, 1471, 1973
BshNI GGYRCC 2 cut(s) 819, 2287
BshTI ACCGGT 1 cut(s) 1463
BshVI ATCGAT 1 cut(s) 228
BsiHKAI GWGCWC 1 cut(s) 2734
BsiHKCI CYCGRG 1 cut(s) 50
BsiSI CCGG 3 cut(s) 591, 1464, 2533
BslFI GGGAC 3 cut(s) 282, 731, 2005
BslI CCNNNNNNNGG 2 cut(s) 576, 2390
BsmAI GTCTC 6 cut(s) 192, 571, 676, 771, 2124, 2338
BsmBI CGTCTC 1 cut(s) 2124
BsmFI GGGAC 3 cut(s) 282, 731, 2005
BsnI GGCC 5 cut(s) 150, 374, 1104, 1471, 1973
BsoBI CYCGRG 1 cut(s) 50
Bsp119I TTCGAA 2 cut(s) 1321, 2254
Bsp1286I GDGCHC 2 cut(s) 1585, 2734
Bsp143I GATC 6 cut(s) 366, 587, 663, 711, 1890, 2668
Bsp19I CCATGG 1 cut(s) 1987
BspACI CCGC 4 cut(s) 75, 983, 1160, 1855
BspANI GGCC 5 cut(s) 150, 374, 1104, 1471, 1973
BspCNI CTCAG 2 cut(s) 20, 1516
BspDI ATCGAT 1 cut(s) 228
BspLI GGNNCC 5 cut(s) 287, 589, 821, 1582, 2289
BspMAI CTGCAG 1 cut(s) 754
BspMI ACCTGC 1 cut(s) 1938
BspPI GGATC 4 cut(s) 582, 595, 671, 2676
BspQI GCTCTTC 2 cut(s) 540, 1223
BspT104I TTCGAA 2 cut(s) 1321, 2254
BspT107I GGYRCC 2 cut(s) 819, 2287
BspTI CTTAAG 2 cut(s) 1792, 1801
BsrDI GCAATG 4 cut(s) 1700, 2142, 2378, 2570
BsrFI RCCGGY 1 cut(s) 1463
BsrI ACTGG 6 cut(s) 207, 837, 1196, 1572, 1675, 1963
BssAI RCCGGY 1 cut(s) 1463
BssECI CCNNGG 4 cut(s) 570, 1609, 1987, 2294
BssMI GATC 6 cut(s) 366, 587, 663, 711, 1890, 2668
BssNI GRCGYC 1 cut(s) 2220
BssT1I CCWWGG 3 cut(s) 1609, 1987, 2294
Bst2UI CCWGG 1 cut(s) 806
Bst4CI ACNGT 7 cut(s) 562, 670, 974, 1589, 1952, 2680, 2695
Bst6I CTCTTC 4 cut(s) 323, 540, 1223, 2308
BstACI GRCGYC 1 cut(s) 2220
BstAFI CTTAAG 2 cut(s) 1792, 1801
BstBAI YACGTR 1 cut(s) 249
BstBI TTCGAA 2 cut(s) 1321, 2254
BstC8I GCNNGC 2 cut(s) 1509, 2276
BstDEI CTNAG 5 cut(s) 7, 1244, 1524, 1887, 2594
BstDSI CCRYGG 2 cut(s) 570, 1987
BstHHI GCGC 1 cut(s) 1935
BstKTI GATC 6 cut(s) 369, 590, 666, 714, 1893, 2671
BstMAI GTCTC 6 cut(s) 192, 571, 676, 771, 2124, 2338
BstMBI GATC 6 cut(s) 366, 587, 663, 711, 1890, 2668
BstMWI GCNNNNNNNGC 3 cut(s) 17, 1121, 1930
BstNI CCWGG 1 cut(s) 806
BstNSI RCATGY 2 cut(s) 1373, 1438
BstSCI CCNGG 2 cut(s) 590, 804
BstSFI CTRYAG 3 cut(s) 750, 772, 2505
BstSNI TACGTA 1 cut(s) 249
BstV1I GCAGC 6 cut(s) 268, 522, 1144, 1749, 2265, 2283
BstV2I GAAGAC 5 cut(s) 459, 699, 936, 1134, 1578
BstX2I RGATCY 1 cut(s) 587
BstXI CCANNNNNNTGG 1 cut(s) 950
BstYI RGATCY 1 cut(s) 587
Bsu15I ATCGAT 1 cut(s) 228
BsuRI GGCC 5 cut(s) 150, 374, 1104, 1471, 1973
BsuTUI ATCGAT 1 cut(s) 228
BtgI CCRYGG 2 cut(s) 570, 1987
BtrI CACGTC 1 cut(s) 841
BtsI GCAGTG 1 cut(s) 468
BtsIMutI CAGTG 5 cut(s) 214, 468, 666, 970, 2183
BveI ACCTGC 1 cut(s) 1938
Cac8I GCNNGC 2 cut(s) 1509, 2276
CaiI CAGNNNCTG 1 cut(s) 112
CfoI GCGC 1 cut(s) 1935
Cfr10I RCCGGY 1 cut(s) 1463
Cfr13I GGNCC 3 cut(s) 148, 294, 2140
ClaI ATCGAT 1 cut(s) 228
CseI GACGC 1 cut(s) 2141
Csp6I GTAC 7 cut(s) 820, 830, 1565, 1780, 1898, 1956, 2288
CspAI ACCGGT 1 cut(s) 1463
CviQI GTAC 7 cut(s) 820, 830, 1565, 1780, 1898, 1956, 2288
DdeI CTNAG 5 cut(s) 7, 1244, 1524, 1887, 2594
DpnI GATC 6 cut(s) 368, 589, 665, 713, 1892, 2670
DpnII GATC 6 cut(s) 366, 587, 663, 711, 1890, 2668
Eam1104I CTCTTC 4 cut(s) 323, 540, 1223, 2308
EarI CTCTTC 4 cut(s) 323, 540, 1223, 2308
Ecl136II GAGCTC 1 cut(s) 2732
Eco105I TACGTA 1 cut(s) 249
Eco130I CCWWGG 3 cut(s) 1609, 1987, 2294
Eco147I AGGCCT 1 cut(s) 1104
Eco24I GRGCYC 2 cut(s) 1585, 2734
Eco32I GATATC 3 cut(s) 223, 762, 850
Eco47I GGWCC 2 cut(s) 294, 2140
Eco53kI GAGCTC 1 cut(s) 2732
Eco57I CTGAAG 3 cut(s) 1374, 2042, 2159
Eco88I CYCGRG 1 cut(s) 50
EcoICRI GAGCTC 1 cut(s) 2732
EcoRI GAATTC 1 cut(s) 233
EcoRII CCWGG 1 cut(s) 804
EcoRV GATATC 3 cut(s) 223, 762, 850
EcoT14I CCWWGG 3 cut(s) 1609, 1987, 2294
EcoT22I ATGCAT 2 cut(s) 1491, 2230
EcoT38I GRGCYC 2 cut(s) 1585, 2734
ErhI CCWWGG 3 cut(s) 1609, 1987, 2294
Esp3I CGTCTC 1 cut(s) 2124
FalI AAGNNNNNCTT 4 cut(s) 302, 334, 1220, 1252
FaqI GGGAC 3 cut(s) 282, 731, 2005
FbaI TGATCA 2 cut(s) 366, 711
FblI GTMKAC 1 cut(s) 1176
Fnu4HI GCNGC 7 cut(s) 75, 257, 536, 1158, 1763, 2272, 2279
FriOI GRGCYC 2 cut(s) 1585, 2734
Fsp4HI GCNGC 7 cut(s) 75, 257, 536, 1158, 1763, 2272, 2279
FspBI CTAG 7 cut(s) 134, 605, 824, 1112, 1374, 2550, 2603
GlaI GCGC 1 cut(s) 1934
GluI GCNGC 7 cut(s) 75, 257, 536, 1158, 1763, 2272, 2279
GsuI CTGGAG 4 cut(s) 827, 1980, 2294, 2489
HaeIII GGCC 5 cut(s) 150, 374, 1104, 1471, 1973
HapII CCGG 3 cut(s) 591, 1464, 2533
HgaI GACGC 1 cut(s) 2141
HhaI GCGC 1 cut(s) 1935
Hin1I GRCGYC 1 cut(s) 2220
Hin6I GCGC 1 cut(s) 1933
HinP1I GCGC 1 cut(s) 1933
HincII GTYRAC 1 cut(s) 1518
HindII GTYRAC 1 cut(s) 1518
HindIII AAGCTT 2 cut(s) 177, 2456
HpaII CCGG 3 cut(s) 591, 1464, 2533
HphI GGTGA 6 cut(s) 613, 808, 2213, 2229, 2530, 2683
Hpy166II GTNNAC 6 cut(s) 799, 970, 1055, 1177, 1518, 1780
Hpy188I TCNGA 5 cut(s) 197, 705, 1525, 1866, 2056
Hpy8I GTNNAC 6 cut(s) 799, 970, 1055, 1177, 1518, 1780
Hpy99I CGWCG 2 cut(s) 500, 1956
HpyCH4III ACNGT 7 cut(s) 562, 670, 974, 1589, 1952, 2680, 2695
HpyCH4IV ACGT 3 cut(s) 248, 840, 2220
HpyF10VI GCNNNNNNNGC 3 cut(s) 17, 1121, 1930
HpyF3I CTNAG 5 cut(s) 7, 1244, 1524, 1887, 2594
HpySE526I ACGT 3 cut(s) 248, 840, 2220
Hsp92I GRCGYC 1 cut(s) 2220
HspAI GCGC 1 cut(s) 1933
KpnI GGTACC 2 cut(s) 823, 2291
Ksp22I TGATCA 2 cut(s) 366, 711
Kzo9I GATC 6 cut(s) 366, 587, 663, 711, 1890, 2668
LguI GCTCTTC 2 cut(s) 540, 1223
Lsp1109I GCAGC 6 cut(s) 268, 522, 1144, 1749, 2265, 2283
LweI GCATC 5 cut(s) 947, 988, 1204, 1242, 1476
MaeI CTAG 7 cut(s) 134, 605, 824, 1112, 1374, 2550, 2603
MaeII ACGT 3 cut(s) 248, 840, 2220
MaeIII GTNAC 7 cut(s) 184, 345, 1239, 1381, 1430, 1638, 1666
MalI GATC 6 cut(s) 368, 589, 665, 713, 1892, 2670
MboI GATC 6 cut(s) 366, 587, 663, 711, 1890, 2668
MflI RGATCY 1 cut(s) 587
MhlI GDGCHC 2 cut(s) 1585, 2734
MlyI GAGTC 3 cut(s) 818, 2083, 2654
MmeI TCCRAC 2 cut(s) 38, 2699
Mph1103I ATGCAT 2 cut(s) 1491, 2230
MroXI GAANNNNTTC 2 cut(s) 317, 1025
MslI CAYNNNNRTG 5 cut(s) 249, 362, 1634, 2383, 2749
MspA1I CMGCKG 2 cut(s) 985, 1157
MspCI CTTAAG 2 cut(s) 1792, 1801
MspI CCGG 3 cut(s) 591, 1464, 2533
MspR9I CCNGG 2 cut(s) 592, 806
MvaI CCWGG 1 cut(s) 806
MwoI GCNNNNNNNGC 3 cut(s) 17, 1121, 1930
NciI CCSGG 1 cut(s) 592
NcoI CCATGG 1 cut(s) 1987
NdeII GATC 6 cut(s) 366, 587, 663, 711, 1890, 2668
NlaIV GGNNCC 5 cut(s) 287, 589, 821, 1582, 2289
NmuCI GTSAC 3 cut(s) 184, 1381, 1638
NsiI ATGCAT 2 cut(s) 1491, 2230
NspI RCATGY 2 cut(s) 1373, 1438
NspV TTCGAA 2 cut(s) 1321, 2254
PaeR7I CTCGAG 1 cut(s) 50
PceI AGGCCT 1 cut(s) 1104
PciSI GCTCTTC 2 cut(s) 540, 1223
PdmI GAANNNNTTC 2 cut(s) 317, 1025
PfeI GAWTC 9 cut(s) 313, 650, 906, 1318, 1617, 1713, 2051, 2150, 2527
PfoI TCCNGGA 1 cut(s) 590
PinAI ACCGGT 1 cut(s) 1463
PkrI GCNGC 7 cut(s) 76, 258, 537, 1159, 1764, 2273, 2280
PleI GAGTC 3 cut(s) 817, 2083, 2653
PpsI GAGTC 3 cut(s) 817, 2083, 2653
Ppu21I YACGTR 1 cut(s) 249
PsiI TTATAA 1 cut(s) 2069
Psp124BI GAGCTC 1 cut(s) 2734
Psp6I CCWGG 1 cut(s) 804
PspGI CCWGG 1 cut(s) 804
PspN4I GGNNCC 5 cut(s) 287, 589, 821, 1582, 2289
PspPI GGNCC 3 cut(s) 148, 294, 2140
PsrI GAACNNNNNNTAC 2 cut(s) 47, 79
PstI CTGCAG 1 cut(s) 754
PstNI CAGNNNCTG 1 cut(s) 112
PsuI RGATCY 1 cut(s) 587
PvuII CAGCTG 1 cut(s) 1157
RsaI GTAC 7 cut(s) 821, 831, 1566, 1781, 1899, 1957, 2289
RsaNI GTAC 7 cut(s) 820, 830, 1565, 1780, 1898, 1956, 2288
RseI CAYNNNNRTG 5 cut(s) 249, 362, 1634, 2383, 2749
SacI GAGCTC 1 cut(s) 2734
SapI GCTCTTC 2 cut(s) 540, 1223
SatI GCNGC 7 cut(s) 75, 257, 536, 1158, 1763, 2272, 2279
Sau3AI GATC 6 cut(s) 366, 587, 663, 711, 1890, 2668
Sau96I GGNCC 3 cut(s) 148, 294, 2140
ScaI AGTACT 2 cut(s) 831, 1566
SchI GAGTC 3 cut(s) 818, 2083, 2654
ScrFI CCNGG 2 cut(s) 592, 806
SduI GDGCHC 2 cut(s) 1585, 2734
SfaNI GCATC 5 cut(s) 947, 988, 1204, 1242, 1476
SfcI CTRYAG 3 cut(s) 750, 772, 2505
Sfr274I CTCGAG 1 cut(s) 50
SfuI TTCGAA 2 cut(s) 1321, 2254
SinI GGWCC 2 cut(s) 294, 2140
SlaI CTCGAG 1 cut(s) 50
SmiMI CAYNNNNRTG 5 cut(s) 249, 362, 1634, 2383, 2749
SmlI CTYRAG 3 cut(s) 50, 1792, 1801
SmoI CTYRAG 3 cut(s) 50, 1792, 1801
SnaBI TACGTA 1 cut(s) 249
SseBI AGGCCT 1 cut(s) 1104
SsiI CCGC 4 cut(s) 75, 983, 1160, 1855
SspI AATATT 1 cut(s) 2011
SspMI CTAG 7 cut(s) 134, 605, 824, 1112, 1374, 2550, 2603
SstI GAGCTC 1 cut(s) 2734
StuI AGGCCT 1 cut(s) 1104
StyD4I CCNGG 2 cut(s) 590, 804
StyI CCWWGG 3 cut(s) 1609, 1987, 2294
TaaI ACNGT 7 cut(s) 562, 670, 974, 1589, 1952, 2680, 2695
TaiI ACGT 3 cut(s) 251, 843, 2223
TaqI TCGA 7 cut(s) 51, 228, 904, 922, 1321, 1893, 2254
TatI WGTACW 3 cut(s) 829, 1564, 1779
TauI GCSGC 1 cut(s) 77
TfiI GAWTC 9 cut(s) 313, 650, 906, 1318, 1617, 1713, 2051, 2150, 2527
TscAI CASTG 5 cut(s) 214, 468, 673, 977, 2183
TseFI GTSAC 3 cut(s) 184, 1381, 1638
TseI GCWGC 6 cut(s) 256, 535, 1157, 1762, 2271, 2278
Tsp45I GTSAC 3 cut(s) 184, 1381, 1638
TspDTI ATGAA 8 cut(s) 102, 226, 246, 504, 558, 1473, 2324, 2733
TspGWI ACGGA 2 cut(s) 71, 559
TspRI CASTG 5 cut(s) 214, 468, 673, 977, 2183
Vha464I CTTAAG 2 cut(s) 1792, 1801
VpaK11BI GGWCC 2 cut(s) 294, 2140
XapI RAATTY 3 cut(s) 233, 1535, 1911
XceI RCATGY 2 cut(s) 1373, 1438
XhoI CTCGAG 1 cut(s) 50
XmiI GTMKAC 1 cut(s) 1176
XmnI GAANNNNTTC 2 cut(s) 317, 1025
XspI CTAG 7 cut(s) 134, 605, 824, 1112, 1374, 2550, 2603
ZraI GACGTC 1 cut(s) 2221
ZrmI AGTACT 2 cut(s) 831, 1566
Zsp2I ATGCAT 2 cut(s) 1491, 2230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.