Prupe.6G200200_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000110
Physical Location & Seq
Forward (+)
20761845 .. 20765181
3337 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G200200.2

Sequence Viewer

Length: 2520 bp
ATGGCGTCTGCTGCAACAGACCTCTTCCTTGGCAAATTTGTTGCCATTCTAGAGAGTGAAGCAGCCTCCATAGCGGGTGTTCGTGATCAAGTTGATGAAATTAAGCAGGAGCTTGTATTCATGAAATCCTTCTTAGAGGATGCTGACGGCGGAGAGCAGGCACACACACAAGTAGAGAAAGCGTGGGTCGCAAGCGTTCGAGACTTGGCCAATGATGTTGAAAACACCATTGATGAGTTCATGTATCGCGTGTACGAGCAACGAAATGGTGGTCGATTTTCCAGGTGGTTCCACAAAACCATTCACTTTCCAAAGCACCTTTGGTATAAGCGTCGAATAGCCAACAAGTTACAGAAAATCGCGGTGGCGATTAGAGCTATTCCGGAGAGAAATCAGAGATATCATGGTGCTGCAGCTGTAGAAGTAAAAAGTACTTCTGAGGATATTCGAAGATGGGTGCAGAACCAAGCGGAGTCTTCTCTTTATCAGAAGGAGGATGAACTTGTCGGGATTGAAGGCGATAAGAACATGTTACTGGGATGGCTGATGGATGAAGCGAAGCACCAAATTGCTGTGTCCGTGGTCGGGATGGGAGGATCAGGGAAGACAACTCTAGTTGCAAGAACCTTCAAAGATGACATTGTAAAGAGAGATTTCGAATGCTATGCATGGATTACTGTTTCCCAGTCTTATGTGATTGAAGACTTACTTAGAAGATTGATCAAAGAATTCCACAAAGGAAAGAGGGAAGAGGTCCCTGCAGACATAAATGCCATGAGTTATAACGAATTGCTGGAGATTTTGGTGAACTACTTGGAGACTAAAAGGTACCTAATTGTATTGGATGACGTGTGGGATGTCCACCTTTGGGACAAAATAAGGTTTTCATTTCCAGATAAACAACTTGGAAGTCGAGTCATGCTTACAACTCGAAGAGAAGACATAGCATCCTCTTCTTTTGGAGTTGAAAGCCATGTTCACAAGATTCAACCGTTGGAAAGGGGTGATGCGTGGGAGCTTTTCAGCATGAAAGCATTCTCAAGTTATCAGAACAAATCTTGTTCACCTGAACTTTTGCCTTTAGCTCGGGAACTTGTGGAAAAGTGTGAAGGCCTACCACTAGCGATCGTAGCCTTAAGTGGTCTCATGTCTTCTAAGAAGTCACTTACAGAGTGGAGCACAGTCTACAATAGCTTAAATTGGCATCTAACAAATAATTCTTTGTTAGAACCTATGAAGATGCGCATCTTGTTGTTTAGTTTTAATGATTTGCCATACCGATTGAAGCAATGCTTTCTATCTTGTTCACTTTTCCCTGAAGATCATGTGATCGTAAATAATAGGCTCATCACATTGTGGATCGCTGAAGGATTTGTTGAACATGTCGAAGGGCTCACGCCAGAAGAAGTTGCAAGGGGCTATCTTATGGAACTCATTTTTCGTAACATGCTACAGCAAAGGTTTCTAGGATCCCTCCCAGCATGTAAGATGCACGATCTTTTGCGGGAGATTGCTCTGTCTATAGCAAAAGAAGAAAAGTTTTGCGTTGTACATGATGGGGGTGAAACAGTAGAAGAAACTGGAGCACTCCGTTTGTCAATTCAAACAACTAATCGAGAAATTGGATCATGCACAGGTATATCACGGCTTCGTTCATTTCTCGTCTTTGCCACTGGCGTATCCTCATTCTCTTTCTCAAATAAACTACCTTTTGACCTTAAATTGTTGAAGGTTCTAGATTTGGAGGATGTCCCACTTGATTATCTGCCAGACAATCTAACGTCCTTATTTAATTTAAAATATTTAAATTTGAGGGGAACTCCAATTACTGAGCTTCCAGAATCCATTGGACAGCTCCGCAACCTTCAGACCTTGAACATCACGCTGACAAAAATTGTGGCACTTCCAAGAGGGATTTCCAAGTTGCTGAACTTACGCCATTTACTTGTGGGCCGGTTCTTTTCCAGAAAGATAATTGGGGTAAGAATACCATCAAGTATTAATGGAGAGGAATTTCTTCGAGTTGACGCATTGTCTTCACCGCCTCCCTACCTTGACAGACTTGAATTGAGCGGAAAACTGGAAAAGGTACCACATTGGTTTTGTTCACTCCACTCTCTCGCATATTTGAATCTGTCTGGGTCCAGACTTGAAGAAGATTTACTACCTCATATTGAAGCATTGCCCTCTCTACGTTCTCTTTGGCTTGATAATGCCTCTGTTAGAAAGGAGTTATGTTTCAACAGAGGCTTTGTGAAGCTTCGGCATTTGTGGGTTTGGGATCTCGCATTATTAAATATGATAACTATCGAAAAAGGGGCGATGCCAAATCTCGAGTTCATAAGAATTCATGATTGCTTGACATTAGAAACATTGCCACAGGGTATTGAGGACCTTACTAATCTACAAGGATACAGATTTGATAATGCTTCAGAGAAGTTTAAAGAGTCCATAAAAGAAGGAGGTGTGGATCATCCAAGGATGCTACTCGTCGACGAGAGATGTAAGAAATATGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

840

Amino Acids

96.04

Weight (kDa)

6.31

Isoelectric Point (pI)

47.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
Acc16I TGCGCA 1 cut(s) 1244
Acc65I GGTACC 2 cut(s) 828, 2089
AccB1I GGYRCC 2 cut(s) 828, 2089
AccBSI CCGCTC 1 cut(s) 2073
AccI GTMKAC 2 cut(s) 1185, 2493
AccII CGCG 2 cut(s) 249, 362
AccIII TCCGGA 1 cut(s) 382
AciI CCGC 8 cut(s) 74, 150, 362, 470, 1504, 1858, 2042, 2073
AclWI GGATC 7 cut(s) 604, 1367, 1464, 1477, 1633, 2289, 2478
AcoI YGGCCR 1 cut(s) 207
AcsI RAATTY 5 cut(s) 35, 728, 1807, 2012, 2346
AcuI CTGAAG 4 cut(s) 1338, 1386, 1850, 2415
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 1356
AfaI GTAC 5 cut(s) 254, 433, 830, 1551, 2091
AfiI CCNNNNNNNGG 2 cut(s) 585, 868
AflII CTTAAG 1 cut(s) 1135
AflIII ACRYGT 3 cut(s) 528, 849, 1381
AhdI GACNNNNNGTC 1 cut(s) 2032
AjiI CACGTC 1 cut(s) 850
AjnI CCWGG 1 cut(s) 281
AjuI GAANNNNNNNTTGG 2 cut(s) 1900, 1932
AluBI AGCT 9 cut(s) 112, 377, 416, 1018, 1085, 1194, 1834, 1855, 2260
AluI AGCT 9 cut(s) 112, 377, 416, 1018, 1085, 1194, 1834, 1855, 2260
Alw21I GWGCWC 2 cut(s) 1181, 1588
Alw26I GTCTC 3 cut(s) 195, 812, 1148
AlwI GGATC 7 cut(s) 604, 1367, 1464, 1477, 1633, 2289, 2478
Ama87I CYCGRG 2 cut(s) 1086, 2333
Aor13HI TCCGGA 1 cut(s) 382
AoxI GGCC 3 cut(s) 207, 1111, 1951
ApeKI GCWGC 4 cut(s) 11, 62, 410, 413
ApoI RAATTY 5 cut(s) 35, 728, 1807, 2012, 2346
ArsI GACNNNNNNTTYG 2 cut(s) 256, 288
AseI ATTAAT 1 cut(s) 2001
Asp700I GAANNNNTTC 3 cut(s) 128, 1034, 2016
Asp718I GGTACC 2 cut(s) 828, 2089
AspLEI GCGC 1 cut(s) 1245
AspS9I GGNCC 4 cut(s) 754, 1951, 2142, 2392
AsuHPI GGTGA 5 cut(s) 817, 1016, 1056, 1574, 2031
AsuII TTCGAA 2 cut(s) 448, 657
AvaI CYCGRG 2 cut(s) 1086, 2333
AvaII GGWCC 3 cut(s) 754, 2142, 2392
BaeI ACNNNNGTAYC 2 cut(s) 1662, 1695
BalI TGGCCA 1 cut(s) 209
BamHI GGATCC 1 cut(s) 1469
BanI GGYRCC 2 cut(s) 828, 2089
BanII GRGCYC 1 cut(s) 1395
BarI GAAGNNNNNNTAC 4 cut(s) 2145, 2148, 2177, 2180
BbsI GAAGAC 6 cut(s) 468, 611, 708, 945, 1143, 2028
Bbv12I GWGCWC 2 cut(s) 1181, 1588
BbvI GCAGC 3 cut(s) 74, 397, 425
BccI CCATC 6 cut(s) 447, 534, 541, 583, 1550, 1999
BceAI ACGGC 2 cut(s) 163, 1661
BcgI CGANNNNNNTGC 2 cut(s) 647, 681
BciT130I CCWGG 1 cut(s) 283
BciVI GTATCC 2 cut(s) 1690, 2405
BclI TGATCA 2 cut(s) 85, 720
BcoDI GTCTC 3 cut(s) 195, 812, 1148
BfaI CTAG 5 cut(s) 50, 614, 1121, 1466, 1736
BfmI CTRYAG 5 cut(s) 411, 417, 759, 1451, 1521
BfrI CTTAAG 1 cut(s) 1135
BfuI GTATCC 2 cut(s) 1690, 2405
BisI GCNGC 4 cut(s) 12, 63, 411, 414
BlsI GCNGC 4 cut(s) 13, 64, 412, 415
BmcAI AGTACT 1 cut(s) 433
Bme1390I CCNGG 1 cut(s) 283
Bme18I GGWCC 3 cut(s) 754, 2142, 2392
BmeRI GACNNNNNGTC 1 cut(s) 2032
BmeT110I CYCGRG 2 cut(s) 1086, 2333
BmgBI CACGTC 1 cut(s) 850
BmgT120I GGNCC 4 cut(s) 754, 1951, 2142, 2392
BmiI GGNNCC 6 cut(s) 290, 756, 830, 1471, 2091, 2143
BmrFI CCNGG 1 cut(s) 283
BmrI ACTGGG 2 cut(s) 545, 679
BmsI GCATC 9 cut(s) 130, 956, 997, 1213, 1230, 1254, 1479, 2313, 2472
BmuI ACTGGG 2 cut(s) 545, 679
BpiI GAAGAC 6 cut(s) 468, 611, 708, 945, 1143, 2028
BplI GAGNNNNNCTC 2 cut(s) 1804, 1836
BpmI CTGGAG 2 cut(s) 815, 1602
Bpu14I TTCGAA 2 cut(s) 448, 657
BpuEI CTTGAG 1 cut(s) 1024
BsaBI GATNNNNATC 2 cut(s) 1244, 2306
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 1148
BsaJI CCNNGG 3 cut(s) 28, 579, 2477
BsaWI WCCGGW 1 cut(s) 382
Bsc4I CCNNNNNNNGG 2 cut(s) 585, 868
Bse118I RCCGGY 1 cut(s) 1953
Bse1I ACTGG 5 cut(s) 540, 685, 1585, 1678, 2085
Bse3DI GCAATG 3 cut(s) 1295, 2180, 2372
Bse8I GATNNNNATC 2 cut(s) 1244, 2306
BseAI TCCGGA 1 cut(s) 382
BseBI CCWGG 1 cut(s) 283
BseDI CCNNGG 3 cut(s) 28, 579, 2477
BseJI GATNNNNATC 2 cut(s) 1244, 2306
BseLI CCNNNNNNNGG 2 cut(s) 585, 868
BseMI GCAATG 3 cut(s) 1295, 2180, 2372
BseMII CTCAG 2 cut(s) 429, 1821
BseNI ACTGG 5 cut(s) 540, 685, 1585, 1678, 2085
BseXI GCAGC 3 cut(s) 74, 397, 425
BseYI CCCAGC 1 cut(s) 1477
BsgI GTGCAG 1 cut(s) 479
Bsh1236I CGCG 2 cut(s) 249, 362
Bsh1285I CGRYCG 1 cut(s) 1128
BshFI GGCC 3 cut(s) 209, 1113, 1953
BshNI GGYRCC 2 cut(s) 828, 2089
BsiEI CGRYCG 1 cut(s) 1128
BsiHKAI GWGCWC 2 cut(s) 1181, 1588
BsiHKCI CYCGRG 2 cut(s) 1086, 2333
BsiSI CCGG 2 cut(s) 383, 1954
BslFI GGGAC 3 cut(s) 740, 884, 1736
BslI CCNNNNNNNGG 2 cut(s) 585, 868
BsmAI GTCTC 3 cut(s) 195, 812, 1148
BsmFI GGGAC 3 cut(s) 740, 884, 1736
BsmI GAATGC 2 cut(s) 665, 1034
BsnI GGCC 3 cut(s) 209, 1113, 1953
Bso31I GGTCTC 1 cut(s) 1148
BsoBI CYCGRG 2 cut(s) 1086, 2333
Bsp119I TTCGAA 2 cut(s) 448, 657
Bsp1286I GDGCHC 3 cut(s) 1181, 1395, 1588
Bsp13I TCCGGA 1 cut(s) 382
Bsp1407I TGTACA 1 cut(s) 1549
BspACI CCGC 8 cut(s) 74, 150, 362, 470, 1504, 1858, 2042, 2073
BspANI GGCC 3 cut(s) 209, 1113, 1953
BspCNI CTCAG 2 cut(s) 430, 1822
BspEI TCCGGA 1 cut(s) 382
BspFNI CGCG 2 cut(s) 249, 362
BspHI TCATGA 2 cut(s) 120, 2350
BspLI GGNNCC 6 cut(s) 290, 756, 830, 1471, 2091, 2143
BspMAI CTGCAG 2 cut(s) 415, 763
BspPI GGATC 7 cut(s) 604, 1367, 1464, 1477, 1633, 2289, 2478
BspT104I TTCGAA 2 cut(s) 448, 657
BspT107I GGYRCC 2 cut(s) 828, 2089
BspTI CTTAAG 1 cut(s) 1135
BspTNI GGTCTC 1 cut(s) 1148
BsrBI CCGCTC 1 cut(s) 2073
BsrDI GCAATG 3 cut(s) 1295, 2180, 2372
BsrFI RCCGGY 1 cut(s) 1953
BsrGI TGTACA 1 cut(s) 1549
BsrI ACTGG 5 cut(s) 540, 685, 1585, 1678, 2085
BssAI RCCGGY 1 cut(s) 1953
BssECI CCNNGG 3 cut(s) 28, 579, 2477
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 28, 2477
Bst2UI CCWGG 1 cut(s) 283
Bst4CI ACNGT 4 cut(s) 679, 993, 1183, 1570
Bst6I CTCTTC 4 cut(s) 29, 744, 928, 958
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 1135
BstAUI TGTACA 1 cut(s) 1549
BstBI TTCGAA 2 cut(s) 448, 657
BstC8I GCNNGC 2 cut(s) 159, 193
BstDEI CTNAG 5 cut(s) 133, 438, 710, 1155, 1830
BstDSI CCRYGG 1 cut(s) 579
BstFNI CGCG 2 cut(s) 249, 362
BstHHI GCGC 1 cut(s) 1245
BstMAI GTCTC 3 cut(s) 195, 812, 1148
BstMCI CGRYCG 1 cut(s) 1128
BstMWI GCNNNNNNNGC 5 cut(s) 11, 71, 188, 374, 1130
BstNI CCWGG 1 cut(s) 283
BstNSI RCATGY 4 cut(s) 532, 1385, 1450, 1485
BstSCI CCNGG 1 cut(s) 281
BstSFI CTRYAG 5 cut(s) 411, 417, 759, 1451, 1521
BstUI CGCG 2 cut(s) 249, 362
BstV1I GCAGC 3 cut(s) 74, 397, 425
BstV2I GAAGAC 6 cut(s) 468, 611, 708, 945, 1143, 2028
BstX2I RGATCY 2 cut(s) 1469, 2281
BstYI RGATCY 2 cut(s) 1469, 2281
BsuI GTATCC 2 cut(s) 1690, 2405
BsuRI GGCC 3 cut(s) 209, 1113, 1953
BtgI CCRYGG 1 cut(s) 579
BtgZI GCGATG 1 cut(s) 2336
BtrI CACGTC 1 cut(s) 850
BtsIMutI CAGTG 1 cut(s) 1671
Cac8I GCNNGC 2 cut(s) 159, 193
CciI TCATGA 2 cut(s) 120, 2350
CfoI GCGC 1 cut(s) 1245
Cfr10I RCCGGY 1 cut(s) 1953
Cfr13I GGNCC 4 cut(s) 754, 1951, 2142, 2392
CseI GACGC 2 cut(s) 320, 2036
Csp6I GTAC 5 cut(s) 253, 432, 829, 1550, 2090
CspCI CAANNNNNGTGG 2 cut(s) 1878, 1913
CviQI GTAC 5 cut(s) 253, 432, 829, 1550, 2090
DdeI CTNAG 5 cut(s) 133, 438, 710, 1155, 1830
DraI TTTAAA 3 cut(s) 1797, 1806, 2443
DraIII CACNNNGTG 1 cut(s) 1356
DriI GACNNNNNGTC 1 cut(s) 2032
EaeI YGGCCR 1 cut(s) 207
Eam1104I CTCTTC 4 cut(s) 29, 744, 928, 958
Eam1105I GACNNNNNGTC 1 cut(s) 2032
EarI CTCTTC 4 cut(s) 29, 744, 928, 958
EciI GGCGGA 1 cut(s) 165
Eco130I CCWWGG 2 cut(s) 28, 2477
Eco147I AGGCCT 1 cut(s) 1113
Eco24I GRGCYC 1 cut(s) 1395
Eco31I GGTCTC 1 cut(s) 1148
Eco32I GATATC 1 cut(s) 401
Eco47I GGWCC 3 cut(s) 754, 2142, 2392
Eco57I CTGAAG 4 cut(s) 1338, 1386, 1850, 2415
Eco88I CYCGRG 2 cut(s) 1086, 2333
EcoO109I RGGNCCY 2 cut(s) 754, 2392
EcoRI GAATTC 2 cut(s) 728, 2346
EcoRII CCWGG 1 cut(s) 281
EcoRV GATATC 1 cut(s) 401
EcoT14I CCWWGG 2 cut(s) 28, 2477
EcoT22I ATGCAT 1 cut(s) 670
EcoT38I GRGCYC 1 cut(s) 1395
ErhI CCWWGG 2 cut(s) 28, 2477
FalI AAGNNNNNCTT 4 cut(s) 693, 725, 1277, 1309
FaqI GGGAC 3 cut(s) 740, 884, 1736
FauI CCCGC 2 cut(s) 67, 1497
FbaI TGATCA 2 cut(s) 85, 720
FblI GTMKAC 2 cut(s) 1185, 2493
Fnu4HI GCNGC 4 cut(s) 12, 63, 411, 414
FriOI GRGCYC 1 cut(s) 1395
Fsp4HI GCNGC 4 cut(s) 12, 63, 411, 414
FspAI RTGCGCAY 1 cut(s) 1244
FspBI CTAG 5 cut(s) 50, 614, 1121, 1466, 1736
FspI TGCGCA 1 cut(s) 1244
GlaI GCGC 1 cut(s) 1244
GluI GCNGC 4 cut(s) 12, 63, 411, 414
GsaI CCCAGC 1 cut(s) 1481
GsuI CTGGAG 2 cut(s) 815, 1602
HaeIII GGCC 3 cut(s) 209, 1113, 1953
HapII CCGG 2 cut(s) 383, 1954
HgaI GACGC 2 cut(s) 320, 2036
HhaI GCGC 1 cut(s) 1245
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 1 cut(s) 1243
HinP1I GCGC 1 cut(s) 1243
HincII GTYRAC 2 cut(s) 2026, 2494
HindII GTYRAC 2 cut(s) 2026, 2494
HindIII AAGCTT 1 cut(s) 2258
HinfI GANTC 6 cut(s) 473, 915, 985, 1841, 2131, 2447
HpaII CCGG 2 cut(s) 383, 1954
HphI GGTGA 5 cut(s) 817, 1016, 1056, 1574, 2031
Hpy188I TCNGA 6 cut(s) 396, 439, 489, 1050, 1869, 2434
Hpy99I CGWCG 3 cut(s) 336, 2495, 2498
HpyCH4III ACNGT 4 cut(s) 679, 993, 1183, 1570
HpyCH4IV ACGT 3 cut(s) 849, 1781, 2194
HpyCH4V TGCA 9 cut(s) 14, 413, 460, 620, 668, 761, 1412, 1492, 1632
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 71, 188, 374, 1130
HpyF3I CTNAG 5 cut(s) 133, 438, 710, 1155, 1830
HpySE526I ACGT 3 cut(s) 849, 1781, 2194
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 1 cut(s) 1243
Kpn2I TCCGGA 1 cut(s) 382
KpnI GGTACC 2 cut(s) 832, 2093
Ksp22I TGATCA 2 cut(s) 85, 720
LmnI GCTCC 5 cut(s) 109, 1015, 1176, 1583, 1860
Lsp1109I GCAGC 3 cut(s) 74, 397, 425
LweI GCATC 9 cut(s) 130, 956, 997, 1213, 1230, 1254, 1479, 2313, 2472
MaeI CTAG 5 cut(s) 50, 614, 1121, 1466, 1736
MaeII ACGT 3 cut(s) 849, 1781, 2194
MaeIII GTNAC 4 cut(s) 348, 531, 1161, 1442
MbiI CCGCTC 1 cut(s) 2073
MflI RGATCY 2 cut(s) 1469, 2281
MhlI GDGCHC 3 cut(s) 1181, 1395, 1588
MlsI TGGCCA 1 cut(s) 209
MluNI TGGCCA 1 cut(s) 209
MlyI GAGTC 3 cut(s) 482, 924, 2456
MmeI TCCRAC 1 cut(s) 975
Mox20I TGGCCA 1 cut(s) 209
Mph1103I ATGCAT 1 cut(s) 670
MroI TCCGGA 1 cut(s) 382
MroXI GAANNNNTTC 3 cut(s) 128, 1034, 2016
MscI TGGCCA 1 cut(s) 209
Msp20I TGGCCA 1 cut(s) 209
MspA1I CMGCKG 1 cut(s) 416
MspCI CTTAAG 1 cut(s) 1135
MspI CCGG 2 cut(s) 383, 1954
MspR9I CCNGG 1 cut(s) 283
Mva1269I GAATGC 2 cut(s) 665, 1034
MvaI CCWGG 1 cut(s) 283
MvnI CGCG 2 cut(s) 249, 362
MwoI GCNNNNNNNGC 5 cut(s) 11, 71, 188, 374, 1130
NlaIV GGNNCC 6 cut(s) 290, 756, 830, 1471, 2091, 2143
NmuCI GTSAC 1 cut(s) 1161
NsbI TGCGCA 1 cut(s) 1244
NsiI ATGCAT 1 cut(s) 670
NspI RCATGY 4 cut(s) 532, 1385, 1450, 1485
NspV TTCGAA 2 cut(s) 448, 657
PaeR7I CTCGAG 1 cut(s) 2333
PagI TCATGA 2 cut(s) 120, 2350
PceI AGGCCT 1 cut(s) 1113
PciI ACATGT 2 cut(s) 528, 1381
PctI GAATGC 2 cut(s) 665, 1034
PdmI GAANNNNTTC 3 cut(s) 128, 1034, 2016
PfeI GAWTC 3 cut(s) 985, 1841, 2131
PkrI GCNGC 4 cut(s) 13, 64, 412, 415
Ple19I CGATCG 1 cut(s) 1128
PleI GAGTC 3 cut(s) 481, 923, 2455
PpsI GAGTC 3 cut(s) 481, 923, 2455
PpuMI RGGWCCY 2 cut(s) 754, 2392
PscI ACATGT 2 cut(s) 528, 1381
PshBI ATTAAT 1 cut(s) 2001
PsiI TTATAA 1 cut(s) 783
Psp5II RGGWCCY 2 cut(s) 754, 2392
Psp6I CCWGG 1 cut(s) 281
PspFI CCCAGC 1 cut(s) 1477
PspGI CCWGG 1 cut(s) 281
PspN4I GGNNCC 6 cut(s) 290, 756, 830, 1471, 2091, 2143
PspPI GGNCC 4 cut(s) 754, 1951, 2142, 2392
PspPPI RGGWCCY 2 cut(s) 754, 2392
PsrI GAACNNNNNNTAC 2 cut(s) 1810, 1842
PstI CTGCAG 2 cut(s) 415, 763
PsuI RGATCY 2 cut(s) 1469, 2281
PvuI CGATCG 1 cut(s) 1128
PvuII CAGCTG 1 cut(s) 416
RsaI GTAC 5 cut(s) 254, 433, 830, 1551, 2091
RsaNI GTAC 5 cut(s) 253, 432, 829, 1550, 2090
SalI GTCGAC 1 cut(s) 2492
SatI GCNGC 4 cut(s) 12, 63, 411, 414
Sau96I GGNCC 4 cut(s) 754, 1951, 2142, 2392
ScaI AGTACT 1 cut(s) 433
SchI GAGTC 3 cut(s) 482, 924, 2456
ScrFI CCNGG 1 cut(s) 283
SduI GDGCHC 3 cut(s) 1181, 1395, 1588
SfaNI GCATC 9 cut(s) 130, 956, 997, 1213, 1230, 1254, 1479, 2313, 2472
SfcI CTRYAG 5 cut(s) 411, 417, 759, 1451, 1521
Sfr274I CTCGAG 1 cut(s) 2333
SfuI TTCGAA 2 cut(s) 448, 657
SgrDI CGTCGACG 1 cut(s) 2492
SinI GGWCC 3 cut(s) 754, 2142, 2392
SlaI CTCGAG 1 cut(s) 2333
SmiI ATTTAAAT 1 cut(s) 1806
SmlI CTYRAG 3 cut(s) 1039, 1135, 2333
SmoI CTYRAG 3 cut(s) 1039, 1135, 2333
SseBI AGGCCT 1 cut(s) 1113
SsiI CCGC 8 cut(s) 74, 150, 362, 470, 1504, 1858, 2042, 2073
SspI AATATT 1 cut(s) 1802
SspMI CTAG 5 cut(s) 50, 614, 1121, 1466, 1736
StuI AGGCCT 1 cut(s) 1113
StyD4I CCNGG 1 cut(s) 281
StyI CCWWGG 2 cut(s) 28, 2477
SwaI ATTTAAAT 1 cut(s) 1806
TaaI ACNGT 4 cut(s) 679, 993, 1183, 1570
TaiI ACGT 3 cut(s) 852, 1784, 2197
TatI WGTACW 2 cut(s) 431, 1549
TfiI GAWTC 3 cut(s) 985, 1841, 2131
TscAI CASTG 1 cut(s) 1678
TseFI GTSAC 1 cut(s) 1161
TseI GCWGC 4 cut(s) 11, 62, 410, 413
Tsp45I GTSAC 1 cut(s) 1161
TspGWI ACGGA 2 cut(s) 568, 1580
TspRI CASTG 1 cut(s) 1678
Vha464I CTTAAG 1 cut(s) 1135
VpaK11BI GGWCC 3 cut(s) 754, 2142, 2392
VspI ATTAAT 1 cut(s) 2001
XapI RAATTY 5 cut(s) 35, 728, 1807, 2012, 2346
XbaI TCTAGA 2 cut(s) 49, 1735
XceI RCATGY 4 cut(s) 532, 1385, 1450, 1485
XcmI CCANNNNNNNNNTGG 1 cut(s) 318
XhoI CTCGAG 1 cut(s) 2333
XmiI GTMKAC 2 cut(s) 1185, 2493
XmnI GAANNNNTTC 3 cut(s) 128, 1034, 2016
XspI CTAG 5 cut(s) 50, 614, 1121, 1466, 1736
ZrmI AGTACT 1 cut(s) 433
Zsp2I ATGCAT 1 cut(s) 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.