Rmu_sc0000694.1_g000010

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000694.1
OG0000110
Physical Location & Seq
Reverse (-)
56032 .. 57645
1614 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000694.1_g000010.1.cds

Sequence Viewer

Length: 1614 bp
atgtcatctaagaagtcgctggatcaatggcaacaagtctgcaacaacttgaattggtatctacataacaattcatcgctagacactgtgagaaacattttgttgttgagtttcactgatttgccatctcaactgaagcattgcttcctctattgttccctttttccagaagattatctatttaatacaaaaaggctgactagattgtggatagcagaaggatttgttgaaaatgtgaaaggggtcacgcctgaagaagttgcaggtgcctatcttcgggaactctgcttccgtagcatgttacaatttgcagatggctttgtttccggatcacctttgggaaggctgagaaaacttaagatgcatgatctgatgcgagagcttgctttgtcgactgccgaaaaagaaatgtttggttatgtatacgacgggagagaagtaatggaagagatctcaacccgtcgcttatcaattcatagaatgaaaggagaatggaggggtatgtcaaagattcgttctcttcttgtatttgacactgacatgttctcattgtctttcttaaatacactggtttctcgattaaaattgttgaggactctagacttggaggatgtccaaattgataaactgccggctgcaattgtttacatgttcaacttgagatatttaaatttgaagggcactttaatcgaggaacttccagagtccataaggcgtctccgcaaccttcaatttctgaacatcagagatactaagatagagtcacttccacaaggaattaagagattgctgaacctgcggaatctaattatgtatcgctacactagggacctgtacttcaaagttgctagtgggacaaaagcgccatcaaatatttgtaagttccagaaattgcaaaatttaacaataattgaatcagaaggggacacttgcagacttatcggcaacatgactcaacttaagtacatcggcatatcaaatgtgaaagaaagagatgagattgacctttgggtctcaattaagaagttcactctgcttcaaggtctggcattaatggcaagtaatgaagaggaaattcttccggtgacagcagaatgtccacctcttcctcaccttcggaagcttaatttggttggcagactgcaaaacgtaataccttggttttcttcactgcatagcctcacaactctggttctgcattggtcaagacttgaagaggatttactacctcaaattgaagcactgcacaatctgacaaggctttatctttgtaatgcatatgttggggaagagttgtgtttccgcagaggctttgtaaagctgatgaggttggagttgttgaattttgcctcggtgaaaaagataactatagaaaatggggtgatgccaaatctccggtacttatgcgttaacagtttcatggagttaaagacggtgccactgggctttgaatacctttctactctacaatatttgggcctgaaagatgttcccatgaaagttattaggtccattcagaaaggaggtgtgtatcactctaaagtacaacacattcctgagattatacatgtttttgaacagtcatccaagtggatccacgaaaacttggcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

537

Amino Acids

62.43

Weight (kDa)

9.08

Isoelectric Point (pI)

50.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 254
AasI GACNNNNNNGTC 1 cut(s) 1010
Acc36I ACCTGC 2 cut(s) 254, 804
AccB1I GGYRCC 2 cut(s) 266, 1435
AccI GTMKAC 2 cut(s) 392, 423
AccIII TCCGGA 1 cut(s) 326
AciI CCGC 3 cut(s) 721, 799, 1303
AclWI GGATC 4 cut(s) 30, 337, 1588, 1601
AcsI RAATTY 4 cut(s) 670, 898, 1074, 1342
AcuI CTGAAG 2 cut(s) 155, 273
AcyI GRCGYC 1 cut(s) 715
AfaI GTAC 4 cut(s) 836, 965, 1400, 1545
AfiI CCNNNNNNNGG 1 cut(s) 276
AflII CTTAAG 2 cut(s) 356, 959
AflIII ACRYGT 3 cut(s) 540, 648, 1567
AjuI GAANNNNNNNTTGG 2 cut(s) 1112, 1144
AloI GAACNNNNNNTCC 2 cut(s) 273, 305
AluBI AGCT 3 cut(s) 382, 1123, 1321
AluI AGCT 3 cut(s) 382, 1123, 1321
Alw26I GTCTC 2 cut(s) 722, 1018
AlwI GGATC 4 cut(s) 30, 337, 1588, 1601
Aor13HI TCCGGA 1 cut(s) 326
AoxI GGCC 1 cut(s) 1477
ApeKI GCWGC 1 cut(s) 635
ApoI RAATTY 4 cut(s) 670, 898, 1074, 1342
AseI ATTAAT 1 cut(s) 1052
Asp700I GAANNNNTTC 1 cut(s) 1077
AspLEI GCGC 1 cut(s) 865
AspS9I GGNCC 3 cut(s) 829, 1477, 1509
AsuHPI GGTGA 5 cut(s) 324, 1096, 1103, 1366, 1393
AvaII GGWCC 2 cut(s) 829, 1509
BaeGI GKGCMC 1 cut(s) 683
BamHI GGATCC 1 cut(s) 1593
BanI GGYRCC 2 cut(s) 266, 1435
BarI GAAGNNNNNNTAC 2 cut(s) 1206, 1238
BbvI GCAGC 1 cut(s) 622
BccI CCATC 3 cut(s) 133, 308, 874
BcgI CGANNNNNNTGC 4 cut(s) 670, 704, 922, 956
BcoDI GTCTC 2 cut(s) 722, 1018
BfaI CTAG 5 cut(s) 80, 201, 599, 825, 849
BfmI CTRYAG 1 cut(s) 1368
BfoI RGCGCY 1 cut(s) 866
BfrI CTTAAG 2 cut(s) 356, 959
BfuAI ACCTGC 2 cut(s) 254, 804
BglII AGATCT 1 cut(s) 450
BisI GCNGC 1 cut(s) 636
BlsI GCNGC 1 cut(s) 637
Bme18I GGWCC 2 cut(s) 829, 1509
BmgT120I GGNCC 3 cut(s) 829, 1477, 1509
BmiI GGNNCC 4 cut(s) 268, 830, 1437, 1595
BmrI ACTGGG 1 cut(s) 1451
BmsI GCATC 3 cut(s) 351, 363, 1374
BmuI ACTGGG 1 cut(s) 1451
BpuEI CTTGAG 1 cut(s) 679
BsaHI GRCGYC 1 cut(s) 715
BsaI GGTCTC 1 cut(s) 1018
BsaJI CCNNGG 2 cut(s) 1157, 1350
BsaWI WCCGGW 3 cut(s) 326, 1081, 1395
Bsc4I CCNNNNNNNGG 1 cut(s) 276
Bse118I RCCGGY 1 cut(s) 631
Bse1I ACTGG 2 cut(s) 573, 1446
Bse3DI GCAATG 1 cut(s) 139
BseAI TCCGGA 1 cut(s) 326
BseDI CCNNGG 2 cut(s) 1157, 1350
BseGI GGATG 2 cut(s) 616, 1583
BseLI CCNNNNNNNGG 1 cut(s) 276
BseMI GCAATG 1 cut(s) 139
BseMII CTCAG 2 cut(s) 338, 1548
BseNI ACTGG 2 cut(s) 573, 1446
BseSI GKGCMC 1 cut(s) 683
BseXI GCAGC 1 cut(s) 622
BsgI GTGCAG 1 cut(s) 1229
BshFI GGCC 1 cut(s) 1479
BshNI GGYRCC 2 cut(s) 266, 1435
BsiSI CCGG 4 cut(s) 327, 632, 1082, 1396
BslFI GGGAC 3 cut(s) 842, 868, 938
BslI CCNNNNNNNGG 1 cut(s) 276
BsmAI GTCTC 2 cut(s) 722, 1018
BsmBI CGTCTC 1 cut(s) 722
BsmFI GGGAC 3 cut(s) 842, 868, 938
BsnI GGCC 1 cut(s) 1479
Bso31I GGTCTC 1 cut(s) 1018
Bsp1286I GDGCHC 1 cut(s) 683
Bsp13I TCCGGA 1 cut(s) 326
Bsp143I GATC 5 cut(s) 22, 329, 367, 450, 1593
BspACI CCGC 3 cut(s) 721, 799, 1303
BspANI GGCC 1 cut(s) 1479
BspCNI CTCAG 2 cut(s) 339, 1549
BspEI TCCGGA 1 cut(s) 326
BspLI GGNNCC 4 cut(s) 268, 830, 1437, 1595
BspMI ACCTGC 2 cut(s) 254, 804
BspPI GGATC 4 cut(s) 30, 337, 1588, 1601
BspT107I GGYRCC 2 cut(s) 266, 1435
BspTI CTTAAG 2 cut(s) 356, 959
BspTNI GGTCTC 1 cut(s) 1018
BsrDI GCAATG 1 cut(s) 139
BsrFI RCCGGY 1 cut(s) 631
BsrI ACTGG 2 cut(s) 573, 1446
BssAI RCCGGY 1 cut(s) 631
BssECI CCNNGG 2 cut(s) 1157, 1350
BssMI GATC 5 cut(s) 22, 329, 367, 450, 1593
BssNAI GTATAC 1 cut(s) 424
BssNI GRCGYC 1 cut(s) 715
BssT1I CCWWGG 1 cut(s) 1157
Bst1107I GTATAC 1 cut(s) 424
Bst4CI ACNGT 4 cut(s) 88, 1415, 1435, 1581
Bst6I CTCTTC 6 cut(s) 441, 525, 1062, 1110, 1209, 1284
BstACI GRCGYC 1 cut(s) 715
BstAFI CTTAAG 2 cut(s) 356, 959
BstC8I GCNNGC 2 cut(s) 384, 633
BstDEI CTNAG 4 cut(s) 9, 347, 753, 1557
BstF5I GGATG 2 cut(s) 616, 1583
BstH2I RGCGCY 1 cut(s) 866
BstHHI GCGC 1 cut(s) 865
BstKTI GATC 5 cut(s) 25, 332, 370, 453, 1596
BstMAI GTCTC 2 cut(s) 722, 1018
BstMBI GATC 5 cut(s) 22, 329, 367, 450, 1593
BstMWI GCNNNNNNNGC 3 cut(s) 294, 796, 1055
BstNSI RCATGY 4 cut(s) 301, 544, 652, 1571
BstSFI CTRYAG 1 cut(s) 1368
BstSLI GKGCMC 1 cut(s) 683
BstV1I GCAGC 1 cut(s) 622
BstX2I RGATCY 2 cut(s) 450, 1593
BstYI RGATCY 2 cut(s) 450, 1593
BstZ17I GTATAC 1 cut(s) 424
BsuRI GGCC 1 cut(s) 1479
BtgZI GCGATG 1 cut(s) 60
BtsCI GGATG 2 cut(s) 616, 1583
BtsI GCAGTG 2 cut(s) 1169, 1241
BtsIMutI CAGTG 7 cut(s) 84, 114, 534, 566, 1169, 1241, 1439
BveI ACCTGC 2 cut(s) 254, 804
Cac8I GCNNGC 2 cut(s) 384, 633
CfoI GCGC 1 cut(s) 865
Cfr10I RCCGGY 1 cut(s) 631
Cfr13I GGNCC 3 cut(s) 829, 1477, 1509
CseI GACGC 1 cut(s) 704
Csp6I GTAC 4 cut(s) 835, 964, 1399, 1544
CviAII CATG 8 cut(s) 298, 365, 541, 649, 949, 1420, 1495, 1568
CviQI GTAC 4 cut(s) 835, 964, 1399, 1544
DdeI CTNAG 4 cut(s) 9, 347, 753, 1557
DpnI GATC 5 cut(s) 24, 331, 369, 452, 1595
DpnII GATC 5 cut(s) 22, 329, 367, 450, 1593
DraI TTTAAA 1 cut(s) 669
DrdI GACNNNNNNGTC 1 cut(s) 1010
DseDI GACNNNNNNGTC 1 cut(s) 1010
Eam1104I CTCTTC 6 cut(s) 441, 525, 1062, 1110, 1209, 1284
EarI CTCTTC 6 cut(s) 441, 525, 1062, 1110, 1209, 1284
Eco130I CCWWGG 1 cut(s) 1157
Eco31I GGTCTC 1 cut(s) 1018
Eco47I GGWCC 2 cut(s) 829, 1509
Eco57I CTGAAG 2 cut(s) 155, 273
EcoO109I RGGNCCY 1 cut(s) 829
EcoT14I CCWWGG 1 cut(s) 1157
EcoT22I ATGCAT 2 cut(s) 366, 1279
ErhI CCWWGG 1 cut(s) 1157
Esp3I CGTCTC 1 cut(s) 722
FaeI CATG 8 cut(s) 301, 368, 544, 652, 952, 1423, 1498, 1571
FalI AAGNNNNNCTT 2 cut(s) 128, 160
FaqI GGGAC 3 cut(s) 842, 868, 938
FatI CATG 8 cut(s) 297, 364, 540, 648, 948, 1419, 1494, 1567
FauNDI CATATG 1 cut(s) 1279
FblI GTMKAC 2 cut(s) 392, 423
Fnu4HI GCNGC 1 cut(s) 636
FokI GGATG 2 cut(s) 623, 1570
Fsp4HI GCNGC 1 cut(s) 636
FspBI CTAG 5 cut(s) 80, 201, 599, 825, 849
GlaI GCGC 1 cut(s) 864
GluI GCNGC 1 cut(s) 636
HaeII RGCGCY 1 cut(s) 866
HaeIII GGCC 1 cut(s) 1479
HapII CCGG 4 cut(s) 327, 632, 1082, 1396
HgaI GACGC 1 cut(s) 704
HhaI GCGC 1 cut(s) 865
Hin1I GRCGYC 1 cut(s) 715
Hin1II CATG 8 cut(s) 301, 368, 544, 652, 952, 1423, 1498, 1571
Hin6I GCGC 1 cut(s) 863
HinP1I GCGC 1 cut(s) 863
HincII GTYRAC 2 cut(s) 393, 1411
HindII GTYRAC 2 cut(s) 393, 1411
HindIII AAGCTT 1 cut(s) 1121
HinfI GANTC 7 cut(s) 511, 595, 704, 761, 802, 914, 952
HpaI GTTAAC 1 cut(s) 1411
HpaII CCGG 4 cut(s) 327, 632, 1082, 1396
HphI GGTGA 5 cut(s) 324, 1096, 1103, 1366, 1393
Hpy166II GTNNAC 6 cut(s) 393, 424, 646, 1029, 1100, 1411
Hpy188I TCNGA 7 cut(s) 372, 738, 746, 919, 1119, 1254, 1518
Hpy188III TCNNGA 9 cut(s) 167, 278, 327, 576, 599, 701, 886, 1206, 1556
Hpy8I GTNNAC 6 cut(s) 393, 424, 646, 1029, 1100, 1411
Hpy99I CGWCG 2 cut(s) 431, 465
HpyAV CCTTC 6 cut(s) 212, 336, 670, 737, 914, 1124
HpyCH4III ACNGT 4 cut(s) 88, 1415, 1435, 1581
HpyCH4IV ACGT 1 cut(s) 1149
HpyF10VI GCNNNNNNNGC 3 cut(s) 294, 796, 1055
HpyF3I CTNAG 4 cut(s) 9, 347, 753, 1557
HpySE526I ACGT 1 cut(s) 1149
Hsp92I GRCGYC 1 cut(s) 715
Hsp92II CATG 8 cut(s) 301, 368, 544, 652, 952, 1423, 1498, 1571
HspAI GCGC 1 cut(s) 863
Kpn2I TCCGGA 1 cut(s) 326
KroI GCCGGC 1 cut(s) 631
KroNI GCCGGC 1 cut(s) 633
KspAI GTTAAC 1 cut(s) 1411
Kzo9I GATC 5 cut(s) 22, 329, 367, 450, 1593
Lsp1109I GCAGC 1 cut(s) 622
LweI GCATC 3 cut(s) 351, 363, 1374
MaeI CTAG 5 cut(s) 80, 201, 599, 825, 849
MaeII ACGT 1 cut(s) 1149
MaeIII GTNAC 4 cut(s) 244, 300, 762, 1084
MalI GATC 5 cut(s) 24, 331, 369, 452, 1595
MboI GATC 5 cut(s) 22, 329, 367, 450, 1593
MfeI CAATTG 1 cut(s) 639
MflI RGATCY 2 cut(s) 450, 1593
MhlI GDGCHC 1 cut(s) 683
MlyI GAGTC 4 cut(s) 589, 713, 770, 946
MmeI TCCRAC 1 cut(s) 1311
Mph1103I ATGCAT 2 cut(s) 366, 1279
MroI TCCGGA 1 cut(s) 326
MroNI GCCGGC 1 cut(s) 631
MroXI GAANNNNTTC 1 cut(s) 1077
MslI CAYNNNNRTG 2 cut(s) 539, 1588
MspCI CTTAAG 2 cut(s) 356, 959
MspI CCGG 4 cut(s) 327, 632, 1082, 1396
MunI CAATTG 1 cut(s) 639
MwoI GCNNNNNNNGC 3 cut(s) 294, 796, 1055
NaeI GCCGGC 1 cut(s) 633
NdeI CATATG 1 cut(s) 1279
NdeII GATC 5 cut(s) 22, 329, 367, 450, 1593
NgoMIV GCCGGC 1 cut(s) 631
NlaIII CATG 8 cut(s) 301, 368, 544, 652, 952, 1423, 1498, 1571
NlaIV GGNNCC 4 cut(s) 268, 830, 1437, 1595
NmuCI GTSAC 3 cut(s) 244, 762, 1084
NsiI ATGCAT 2 cut(s) 366, 1279
NspI RCATGY 4 cut(s) 301, 544, 652, 1571
PaqCI CACCTGC 1 cut(s) 254
PciI ACATGT 3 cut(s) 540, 648, 1567
PdiI GCCGGC 1 cut(s) 633
PdmI GAANNNNTTC 1 cut(s) 1077
PfeI GAWTC 3 cut(s) 511, 802, 914
PkrI GCNGC 1 cut(s) 637
PleI GAGTC 4 cut(s) 589, 712, 769, 946
PpsI GAGTC 4 cut(s) 589, 712, 769, 946
PpuMI RGGWCCY 1 cut(s) 829
PscI ACATGT 3 cut(s) 540, 648, 1567
PshBI ATTAAT 1 cut(s) 1052
Psp5II RGGWCCY 1 cut(s) 829
PspN4I GGNNCC 4 cut(s) 268, 830, 1437, 1595
PspPI GGNCC 3 cut(s) 829, 1477, 1509
PspPPI RGGWCCY 1 cut(s) 829
PsuI RGATCY 2 cut(s) 450, 1593
RsaI GTAC 4 cut(s) 836, 965, 1400, 1545
RsaNI GTAC 4 cut(s) 835, 964, 1399, 1544
RseI CAYNNNNRTG 2 cut(s) 539, 1588
SalI GTCGAC 1 cut(s) 391
SatI GCNGC 1 cut(s) 636
Sau3AI GATC 5 cut(s) 22, 329, 367, 450, 1593
Sau96I GGNCC 3 cut(s) 829, 1477, 1509
SchI GAGTC 4 cut(s) 589, 713, 770, 946
SduI GDGCHC 1 cut(s) 683
SfaNI GCATC 3 cut(s) 351, 363, 1374
SfcI CTRYAG 1 cut(s) 1368
SinI GGWCC 2 cut(s) 829, 1509
SmiI ATTTAAAT 1 cut(s) 669
SmiMI CAYNNNNRTG 2 cut(s) 539, 1588
SmlI CTYRAG 3 cut(s) 356, 658, 959
SmoI CTYRAG 3 cut(s) 356, 658, 959
SsiI CCGC 3 cut(s) 721, 799, 1303
SspI AATATT 2 cut(s) 874, 1472
SspMI CTAG 5 cut(s) 80, 201, 599, 825, 849
StyI CCWWGG 1 cut(s) 1157
SwaI ATTTAAAT 1 cut(s) 669
TaaI ACNGT 4 cut(s) 88, 1415, 1435, 1581
TaiI ACGT 1 cut(s) 1152
TaqI TCGA 3 cut(s) 392, 577, 690
TatI WGTACW 3 cut(s) 834, 963, 1543
TfiI GAWTC 3 cut(s) 511, 802, 914
TscAI CASTG 7 cut(s) 91, 121, 541, 573, 1176, 1248, 1446
TseFI GTSAC 3 cut(s) 244, 762, 1084
TseI GCWGC 1 cut(s) 635
Tsp45I GTSAC 3 cut(s) 244, 762, 1084
TspDTI ATGAA 6 cut(s) 63, 464, 497, 1080, 1408, 1511
TspGWI ACGGA 1 cut(s) 281
TspRI CASTG 7 cut(s) 91, 121, 541, 573, 1176, 1248, 1446
Vha464I CTTAAG 2 cut(s) 356, 959
VpaK11BI GGWCC 2 cut(s) 829, 1509
VspI ATTAAT 1 cut(s) 1052
XapI RAATTY 4 cut(s) 670, 898, 1074, 1342
XbaI TCTAGA 1 cut(s) 598
XceI RCATGY 4 cut(s) 301, 544, 652, 1571
XmiI GTMKAC 2 cut(s) 392, 423
XmnI GAANNNNTTC 1 cut(s) 1077
XspI CTAG 5 cut(s) 80, 201, 599, 825, 849
Zsp2I ATGCAT 2 cut(s) 366, 1279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.