Rh5BG132000

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000110
Physical Location & Seq
Reverse (-)
13005243 .. 13006508
1266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG132000.1

Sequence Viewer

Length: 1266 bp
ATGCATGATCTGATGCGAGAGCTTGCTTTGTCGACATCCGAGAAAGAAAAGTTTGGACTTGTATACGAGGGGAGAGAAGTAATGGAAGACATCTCAAGCCGTCGCTTGTCAATTCACAAAATGGAAGGAGAAATTAAACCATGCCCGGGTATGTCAAACATTCGTTCTCTTCTTGTCTTTGCCACTGACATGTCCTCATTGACTTTCTCAAATACACTGGTTTCTCATTTCAAATTGTTGAGGACTCTAGACTTGGAGCATGTCCAAATTGATAAACTGCCACGTGCAGTTGTTTACTTGTTCAACTTGAGATACTTAAATCTGATGGGCACTTTAATCGAGAAACTTCCAGAGTCCATAGGGCGTCTCCGCAACCTTCAATTTCTAAACCTGAGGCGTACTAAGATAGAGTCACTTCCACAAGGAATTGCAAAGTTGCTAAACCTGCGCCATCTAATTATGTTTCGCTACAGTGGAAAGTATCTGGACTTCAGACTTGTAAGGGGGACAAGAGCGCCACCAAATATTTGTAAGTTGCAGAAATTGCAATGTTTATCAATTATTGAATCAGAAGGGGACACTATTAGACTTATCGGCAACATGACTCAACTTAGGAGCATCGGCATCTCGAATGTGAAAGAAAGAGATGAGATTGACCTTTGGGTCTCAATTAAGAAGTTGACTCCGCTGCAATCTATGGTTTTAATAGCAAGTGATGAAGAGGAAATTCTTCCGGTGAAAGCACAATGTCCAGCTCTTCCGCACCTTCAAACGCTTTTTTTGTTTGGCAGACTGCAAAACGTAATACCTTGGTTTTCTTCACTGCATAGCCTCACAGCTCTGGTTCTACGTTGGTCTAGACTTGAAGACGATTTACTGCCTCAAATTGAAGCACTGCCCAATCTGACAACGCTCTCTCTTTGTAATGCATATGTTGGGGAAGAGTTGTGTTTCAGCAGAGGATTTGTAAAGCTGGAGAGGTTGCAGTTGTTGAAATTTGCCTCGGTGAAAAAGATAACTATAGAAAAAGGGGTGATGCCAAATCTCCAGATCTTAAGGGTTGACCACTGCATGGAACTGAAGGCAGTGCCACAGGGCCTTGAATACCTTTCTAATCTACAATCTTTGGGCCTGGCAGATGTTCCCATTGAAGTTATACAACCCATTCGGAAAGGAGGTGAGGATCGCTTTAAGGTACAACACATTCCTGAGATTATACATGTTTTCGAACAATCATCCAACTCGGTCTTCGAAAACTTAGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

421

Amino Acids

48.12

Weight (kDa)

8.73

Isoelectric Point (pI)

59.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 54 - 375 1.2e-40 Leucine-rich repeat region
LRR_8 PF13855 80 - 136 3.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 662
Acc36I ACCTGC 1 cut(s) 453
AccB7I CCANNNNNTGG 1 cut(s) 1072
AccI GTMKAC 2 cut(s) 32, 63
AciI CCGC 3 cut(s) 370, 686, 761
AclWI GGATC 1 cut(s) 1191
AcsI RAATTY 2 cut(s) 726, 995
AcuI CTGAAG 2 cut(s) 475, 1100
AcvI CACGTG 1 cut(s) 284
AcyI GRCGYC 1 cut(s) 364
AfaI GTAC 2 cut(s) 400, 1197
AfiI CCNNNNNNNGG 2 cut(s) 146, 1072
AflII CTTAAG 1 cut(s) 1054
AflIII ACRYGT 2 cut(s) 189, 1219
AjnI CCWGG 1 cut(s) 1131
AjuI GAANNNNNNNTTGG 2 cut(s) 1232, 1264
AluBI AGCT 4 cut(s) 22, 755, 839, 973
AluI AGCT 4 cut(s) 22, 755, 839, 973
Alw26I GTCTC 2 cut(s) 371, 670
AlwI GGATC 1 cut(s) 1191
Ama87I CYCGRG 1 cut(s) 145
AoxI GGCC 2 cut(s) 1096, 1129
ApeKI GCWGC 1 cut(s) 688
ApoI RAATTY 2 cut(s) 726, 995
Asp700I GAANNNNTTC 1 cut(s) 729
AspLEI GCGC 2 cut(s) 450, 517
AspS9I GGNCC 2 cut(s) 1096, 1129
AsuC2I CCSGG 2 cut(s) 146, 147
AsuHPI GGTGA 4 cut(s) 748, 1018, 1045, 1190
AsuII TTCGAA 2 cut(s) 1227, 1251
AvaI CYCGRG 1 cut(s) 145
AxyI CCTNAGG 1 cut(s) 392
BaeGI GKGCMC 1 cut(s) 332
BarI GAAGNNNNNNTAC 4 cut(s) 473, 505, 858, 890
BbrPI CACGTG 1 cut(s) 284
BbsI GAAGAC 3 cut(s) 93, 873, 1240
BbvI GCAGC 1 cut(s) 675
BccI CCATC 2 cut(s) 319, 459
BceAI ACGGC 1 cut(s) 84
BcgI CGANNNNNNTGC 2 cut(s) 319, 353
BciT130I CCWGG 1 cut(s) 1133
BcnI CCSGG 2 cut(s) 146, 147
BcoDI GTCTC 2 cut(s) 371, 670
BfaI CTAG 3 cut(s) 248, 858, 1264
BfmI CTRYAG 2 cut(s) 469, 1020
BfoI RGCGCY 1 cut(s) 518
BfrI CTTAAG 1 cut(s) 1054
BfuAI ACCTGC 1 cut(s) 453
BglII AGATCT 1 cut(s) 1050
BisI GCNGC 1 cut(s) 689
BlsI GCNGC 1 cut(s) 690
Bme1390I CCNGG 3 cut(s) 146, 147, 1133
BmeT110I CYCGRG 1 cut(s) 145
BmgT120I GGNCC 2 cut(s) 1096, 1129
BmrFI CCNGG 3 cut(s) 146, 147, 1133
BmsI GCATC 4 cut(s) 3, 627, 633, 1026
BpiI GAAGAC 3 cut(s) 93, 873, 1240
BpmI CTGGAG 2 cut(s) 995, 1031
Bpu14I TTCGAA 2 cut(s) 1227, 1251
BpuEI CTTGAG 2 cut(s) 79, 328
BpuMI CCSGG 2 cut(s) 146, 147
BsaAI YACGTR 1 cut(s) 284
BsaHI GRCGYC 1 cut(s) 364
BsaI GGTCTC 1 cut(s) 670
BsaJI CCNNGG 3 cut(s) 145, 809, 1002
BsaWI WCCGGW 1 cut(s) 733
Bsc4I CCNNNNNNNGG 2 cut(s) 146, 1072
Bse1I ACTGG 1 cut(s) 222
Bse21I CCTNAGG 1 cut(s) 392
Bse3DI GCAATG 1 cut(s) 554
BseBI CCWGG 1 cut(s) 1133
BseDI CCNNGG 3 cut(s) 145, 809, 1002
BseGI GGATG 2 cut(s) 35, 1235
BseLI CCNNNNNNNGG 2 cut(s) 146, 1072
BseMI GCAATG 1 cut(s) 554
BseMII CTCAG 2 cut(s) 383, 1200
BseNI ACTGG 1 cut(s) 222
BseSI GKGCMC 1 cut(s) 332
BseXI GCAGC 1 cut(s) 675
BsgI GTGCAG 1 cut(s) 306
BshFI GGCC 2 cut(s) 1098, 1131
BsiHKCI CYCGRG 1 cut(s) 145
BsiSI CCGG 2 cut(s) 146, 734
BslFI GGGAC 2 cut(s) 520, 590
BslI CCNNNNNNNGG 2 cut(s) 146, 1072
BsmAI GTCTC 2 cut(s) 371, 670
BsmBI CGTCTC 1 cut(s) 371
BsmFI GGGAC 2 cut(s) 520, 590
BsnI GGCC 2 cut(s) 1098, 1131
Bso31I GGTCTC 1 cut(s) 670
BsoBI CYCGRG 1 cut(s) 145
Bsp119I TTCGAA 2 cut(s) 1227, 1251
Bsp1286I GDGCHC 1 cut(s) 332
Bsp143I GATC 3 cut(s) 7, 1050, 1183
BspACI CCGC 3 cut(s) 370, 686, 761
BspANI GGCC 2 cut(s) 1098, 1131
BspCNI CTCAG 2 cut(s) 384, 1201
BspMI ACCTGC 1 cut(s) 453
BspPI GGATC 1 cut(s) 1191
BspQI GCTCTTC 1 cut(s) 762
BspT104I TTCGAA 2 cut(s) 1227, 1251
BspTI CTTAAG 1 cut(s) 1054
BspTNI GGTCTC 1 cut(s) 670
BsrDI GCAATG 1 cut(s) 554
BsrI ACTGG 1 cut(s) 222
BssECI CCNNGG 3 cut(s) 145, 809, 1002
BssMI GATC 3 cut(s) 7, 1050, 1183
BssNAI GTATAC 1 cut(s) 64
BssNI GRCGYC 1 cut(s) 364
BssT1I CCWWGG 1 cut(s) 809
Bst1107I GTATAC 1 cut(s) 64
Bst2UI CCWGG 1 cut(s) 1133
Bst4CI ACNGT 1 cut(s) 473
Bst6I CTCTTC 4 cut(s) 174, 714, 762, 936
BstACI GRCGYC 1 cut(s) 364
BstAFI CTTAAG 1 cut(s) 1054
BstAPI GCANNNNNTGC 1 cut(s) 544
BstBAI YACGTR 1 cut(s) 284
BstBI TTCGAA 2 cut(s) 1227, 1251
BstC8I GCNNGC 1 cut(s) 24
BstDEI CTNAG 5 cut(s) 392, 402, 611, 1209, 1258
BstF5I GGATG 2 cut(s) 35, 1235
BstH2I RGCGCY 1 cut(s) 518
BstHHI GCGC 2 cut(s) 450, 517
BstKTI GATC 3 cut(s) 10, 1053, 1186
BstMAI GTCTC 2 cut(s) 371, 670
BstMBI GATC 3 cut(s) 7, 1050, 1183
BstMWI GCNNNNNNNGC 2 cut(s) 445, 544
BstNI CCWGG 1 cut(s) 1133
BstNSI RCATGY 3 cut(s) 193, 263, 1223
BstSCI CCNGG 3 cut(s) 144, 145, 1131
BstSFI CTRYAG 2 cut(s) 469, 1020
BstSLI GKGCMC 1 cut(s) 332
BstV1I GCAGC 1 cut(s) 675
BstV2I GAAGAC 3 cut(s) 93, 873, 1240
BstX2I RGATCY 1 cut(s) 1050
BstYI RGATCY 1 cut(s) 1050
BstZ17I GTATAC 1 cut(s) 64
Bsu36I CCTNAGG 1 cut(s) 392
BsuRI GGCC 2 cut(s) 1098, 1131
BtsCI GGATG 2 cut(s) 35, 1235
BtsI GCAGTG 4 cut(s) 821, 893, 1066, 1092
BtsIMutI CAGTG 7 cut(s) 183, 215, 478, 821, 893, 1066, 1092
BveI ACCTGC 1 cut(s) 453
Cac8I GCNNGC 1 cut(s) 24
CfoI GCGC 2 cut(s) 450, 517
Cfr13I GGNCC 2 cut(s) 1096, 1129
Cfr9I CCCGGG 1 cut(s) 145
CseI GACGC 1 cut(s) 353
Csp6I GTAC 2 cut(s) 399, 1196
CviAII CATG 7 cut(s) 5, 141, 190, 260, 601, 1072, 1220
CviJI RGCY 9 cut(s) 22, 99, 755, 831, 839, 973, 1098, 1131, 1262
CviKI_1 RGCY 9 cut(s) 22, 99, 755, 831, 839, 973, 1098, 1131, 1262
CviQI GTAC 2 cut(s) 399, 1196
DdeI CTNAG 5 cut(s) 392, 402, 611, 1209, 1258
DpnI GATC 3 cut(s) 9, 1052, 1185
DpnII GATC 3 cut(s) 7, 1050, 1183
DrdI GACNNNNNNGTC 1 cut(s) 662
DseDI GACNNNNNNGTC 1 cut(s) 662
Eam1104I CTCTTC 4 cut(s) 174, 714, 762, 936
EarI CTCTTC 4 cut(s) 174, 714, 762, 936
Eco130I CCWWGG 1 cut(s) 809
Eco31I GGTCTC 1 cut(s) 670
Eco57I CTGAAG 2 cut(s) 475, 1100
Eco72I CACGTG 1 cut(s) 284
Eco81I CCTNAGG 1 cut(s) 392
Eco88I CYCGRG 1 cut(s) 145
EcoO109I RGGNCCY 1 cut(s) 1096
EcoRII CCWGG 1 cut(s) 1131
EcoT14I CCWWGG 1 cut(s) 809
EcoT22I ATGCAT 2 cut(s) 6, 931
ErhI CCWWGG 1 cut(s) 809
Esp3I CGTCTC 1 cut(s) 371
FaeI CATG 7 cut(s) 8, 144, 193, 263, 604, 1075, 1223
FaqI GGGAC 2 cut(s) 520, 590
FatI CATG 7 cut(s) 4, 140, 189, 259, 600, 1071, 1219
FauNDI CATATG 1 cut(s) 931
FblI GTMKAC 2 cut(s) 32, 63
Fnu4HI GCNGC 1 cut(s) 689
FokI GGATG 2 cut(s) 22, 1222
Fsp4HI GCNGC 1 cut(s) 689
FspBI CTAG 3 cut(s) 248, 858, 1264
GlaI GCGC 2 cut(s) 449, 516
GluI GCNGC 1 cut(s) 689
GsuI CTGGAG 2 cut(s) 995, 1031
HaeII RGCGCY 1 cut(s) 518
HaeIII GGCC 2 cut(s) 1098, 1131
HapII CCGG 2 cut(s) 146, 734
HgaI GACGC 1 cut(s) 353
HhaI GCGC 2 cut(s) 450, 517
Hin1I GRCGYC 1 cut(s) 364
Hin1II CATG 7 cut(s) 8, 144, 193, 263, 604, 1075, 1223
Hin6I GCGC 2 cut(s) 448, 515
HinP1I GCGC 2 cut(s) 448, 515
HincII GTYRAC 3 cut(s) 33, 681, 1063
HindII GTYRAC 3 cut(s) 33, 681, 1063
HinfI GANTC 6 cut(s) 244, 353, 410, 566, 604, 682
HpaII CCGG 2 cut(s) 146, 734
HphI GGTGA 4 cut(s) 748, 1018, 1045, 1190
Hpy166II GTNNAC 5 cut(s) 33, 64, 295, 681, 1063
Hpy188I TCNGA 7 cut(s) 12, 40, 324, 494, 571, 906, 1170
Hpy188III TCNNGA 8 cut(s) 248, 340, 350, 485, 628, 858, 1048, 1208
Hpy8I GTNNAC 5 cut(s) 33, 64, 295, 681, 1063
Hpy99I CGWCG 1 cut(s) 105
HpyAV CCTTC 5 cut(s) 119, 386, 566, 776, 1075
HpyCH4III ACNGT 1 cut(s) 473
HpyCH4IV ACGT 3 cut(s) 283, 801, 850
HpyF10VI GCNNNNNNNGC 2 cut(s) 445, 544
HpyF3I CTNAG 5 cut(s) 392, 402, 611, 1209, 1258
HpySE526I ACGT 3 cut(s) 283, 801, 850
Hsp92I GRCGYC 1 cut(s) 364
Hsp92II CATG 7 cut(s) 8, 144, 193, 263, 604, 1075, 1223
HspAI GCGC 2 cut(s) 448, 515
Kzo9I GATC 3 cut(s) 7, 1050, 1183
LguI GCTCTTC 1 cut(s) 762
LmnI GCTCC 2 cut(s) 256, 615
Lsp1109I GCAGC 1 cut(s) 675
LweI GCATC 4 cut(s) 3, 627, 633, 1026
MaeI CTAG 3 cut(s) 248, 858, 1264
MaeII ACGT 3 cut(s) 283, 801, 850
MaeIII GTNAC 1 cut(s) 411
MalI GATC 3 cut(s) 9, 1052, 1185
MboI GATC 3 cut(s) 7, 1050, 1183
MboII GAAGA 9 cut(s) 98, 161, 722, 731, 749, 810, 878, 953, 1240
MflI RGATCY 1 cut(s) 1050
MhlI GDGCHC 1 cut(s) 332
MlyI GAGTC 5 cut(s) 238, 362, 419, 598, 676
MmeI TCCRAC 1 cut(s) 1263
Mph1103I ATGCAT 2 cut(s) 6, 931
MroXI GAANNNNTTC 1 cut(s) 729
MseI TTAA 7 cut(s) 135, 317, 335, 672, 704, 1055, 1191
MslI CAYNNNNRTG 1 cut(s) 188
MspA1I CMGCKG 1 cut(s) 688
MspCI CTTAAG 1 cut(s) 1054
MspI CCGG 2 cut(s) 146, 734
MspR9I CCNGG 3 cut(s) 146, 147, 1133
MvaI CCWGG 1 cut(s) 1133
MwoI GCNNNNNNNGC 2 cut(s) 445, 544
NciI CCSGG 2 cut(s) 146, 147
NdeI CATATG 1 cut(s) 931
NdeII GATC 3 cut(s) 7, 1050, 1183
NlaIII CATG 7 cut(s) 8, 144, 193, 263, 604, 1075, 1223
NmuCI GTSAC 1 cut(s) 411
NsiI ATGCAT 2 cut(s) 6, 931
NspI RCATGY 3 cut(s) 193, 263, 1223
NspV TTCGAA 2 cut(s) 1227, 1251
PciI ACATGT 2 cut(s) 189, 1219
PciSI GCTCTTC 1 cut(s) 762
PdmI GAANNNNTTC 1 cut(s) 729
PfeI GAWTC 1 cut(s) 566
PflMI CCANNNNNTGG 1 cut(s) 1072
PkrI GCNGC 1 cut(s) 690
PleI GAGTC 5 cut(s) 238, 361, 418, 598, 676
PmaCI CACGTG 1 cut(s) 284
PmlI CACGTG 1 cut(s) 284
PpsI GAGTC 5 cut(s) 238, 361, 418, 598, 676
Ppu21I YACGTR 1 cut(s) 284
PscI ACATGT 2 cut(s) 189, 1219
Psp6I CCWGG 1 cut(s) 1131
PspCI CACGTG 1 cut(s) 284
PspGI CCWGG 1 cut(s) 1131
PspPI GGNCC 2 cut(s) 1096, 1129
PsuI RGATCY 1 cut(s) 1050
RsaI GTAC 2 cut(s) 400, 1197
RsaNI GTAC 2 cut(s) 399, 1196
RseI CAYNNNNRTG 1 cut(s) 188
SalI GTCGAC 1 cut(s) 31
SapI GCTCTTC 1 cut(s) 762
SaqAI TTAA 7 cut(s) 135, 317, 335, 672, 704, 1055, 1191
SatI GCNGC 1 cut(s) 689
Sau3AI GATC 3 cut(s) 7, 1050, 1183
Sau96I GGNCC 2 cut(s) 1096, 1129
SchI GAGTC 5 cut(s) 238, 362, 419, 598, 676
ScrFI CCNGG 3 cut(s) 146, 147, 1133
SduI GDGCHC 1 cut(s) 332
SfaNI GCATC 4 cut(s) 3, 627, 633, 1026
SfcI CTRYAG 2 cut(s) 469, 1020
SfuI TTCGAA 2 cut(s) 1227, 1251
SmaI CCCGGG 1 cut(s) 147
SmiMI CAYNNNNRTG 1 cut(s) 188
SmlI CTYRAG 3 cut(s) 94, 307, 1054
SmoI CTYRAG 3 cut(s) 94, 307, 1054
SsiI CCGC 3 cut(s) 370, 686, 761
SspI AATATT 1 cut(s) 526
SspMI CTAG 3 cut(s) 248, 858, 1264
StyD4I CCNGG 3 cut(s) 144, 145, 1131
StyI CCWWGG 1 cut(s) 809
TaaI ACNGT 1 cut(s) 473
TaiI ACGT 3 cut(s) 286, 804, 853
TaqI TCGA 5 cut(s) 32, 339, 629, 1227, 1251
TaqII GACCGA 1 cut(s) 1234
TfiI GAWTC 1 cut(s) 566
Tru1I TTAA 7 cut(s) 135, 317, 335, 672, 704, 1055, 1191
Tru9I TTAA 7 cut(s) 135, 317, 335, 672, 704, 1055, 1191
TscAI CASTG 7 cut(s) 190, 222, 478, 828, 900, 1073, 1092
TseFI GTSAC 1 cut(s) 411
TseI GCWGC 1 cut(s) 688
Tsp45I GTSAC 1 cut(s) 411
TspDTI ATGAA 1 cut(s) 732
TspMI CCCGGG 1 cut(s) 145
TspRI CASTG 7 cut(s) 190, 222, 478, 828, 900, 1073, 1092
Van91I CCANNNNNTGG 1 cut(s) 1072
Vha464I CTTAAG 1 cut(s) 1054
XapI RAATTY 2 cut(s) 726, 995
XbaI TCTAGA 2 cut(s) 247, 857
XceI RCATGY 3 cut(s) 193, 263, 1223
XmaI CCCGGG 1 cut(s) 145
XmiI GTMKAC 2 cut(s) 32, 63
XmnI GAANNNNTTC 1 cut(s) 729
XspI CTAG 3 cut(s) 248, 858, 1264
Zsp2I ATGCAT 2 cut(s) 6, 931
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.