RLG00000019459

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000110
Physical Location & Seq
Reverse (-)
52219639 .. 52223365
3727 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019459

Sequence Viewer

Length: 1803 bp
ATGGAACATATAGTGAATGGACAGCAGAGCCAAGCCATTGTCTCCGTGGTGGGGATGGGAGGATCTGGGAAAACCGCTCTTGTTGCTAAGATCTTCAACAATGACATTGTAAAGAGACATTTCAATTGCTATGCATGGGTTACAGTTTCCCAAACTTATGTGATTGAAGACTTATTTAGAAGCTTGACCAAGCAATTCCATGAATCAAGGAAGGAGGAGGTTCCAAGAGACATTAATATCATGAGCTATAGAGAATTGGTGGAGATTCTTGTGAACTACTTGGACTCAAAAAGGTATCTAGTTGTGCTGGATGATGTATGGAGCATAAATCTTTGGACACAAATAAGGGTATCACTTCAAGATAGACAACTTGGAAGTCGAGTTGTACTCACCACTCGGAACGATGAGATAGCACGCTATGCTTTTGGAGTTGCAAGTCATGTTCACCGTATTCAACCCCTGGGAAAGAAGGACACTTGGGTGCTTTTTTGCAAGAAGACATTCTCTACTCATCCTAATAAATCTTGTCCACTTGAACTTGAGCCATATGCTCGGGAACTTGTGGGGAAGTCTGAAGGATTTGTTGAACATGTGAAAGGTGTCACACCGGAAGTGATTGCAGATAGATATCTTTTGGAACTTTGTTTTCGTAGCATGCTACAAGTTGTGGAGAGGAATGAAGCAGGAAGACCAAAAAAATGCAAGATGCATGATGTCATGCGTGAGCTTGCTCTTTCAACATCCGAGAAAGAAAAGTTTGCTGCTGTGTATGATGGGAAAGATGAAGCAATTGAAGCCCGCCGTTTGTCAATTCGATCTGAAGGAGAAATAAAATCCAGCACAGGTATATCACAGCTTAGATCTGTTCTTGTCTTTGTCAAAGAGACAAGGTTGCCTTCTGATTGCAAATTTTTGAGGGTGCTAGACTTGGAGAATGTGTCAATTACTAAACTGCCAGATGATCTTGGGTACTTTTTCAACTTAAGATATTTAAATTTGAGGAGAACTCAGATTAAGGAGCTTCCAAAATCCATAGGAAAGCTACGCAACCTTCAAACCTTGGACATCCGCGAAAGTAAGATAGAGGAACTTCCAAAAGGAATTGCCAAGTTGTTGAATCTGCGCCATCTAATTATGTACCGTTACACTGGTGATTATCTTGGGTTTAGATATGTCAAAGGGACAAGAGTACCAGTGGATGTTAGTAAGATGAATAAATTACAAGTTTTGGCATGTGTTGAGGCAGAAGGGGACACTATTAGGCAGAATGTTACAACTCTGTATCTTCATTGGTCTAAACTTGAAGTAGATTTGGTACCTCACATTGAAGCACTGCCCAATCTGGGATATCTTATTCTTATTAATGCGTATGTCGGGAAACAGCTGTATTTTCGCAGAGGCTTTGCAAAGCTAAAAAGGCTCAGTTTGCGTAATCATCCCTTGTTGACAGAAATAACTATAGAGAATGGGGTGATGCCAAATCTCAATCACTTGCATGTTGAGAGCTGCATGTCATTAAAGACATTGCCACTGGGTCTTGAATACCTGACTAATCTTCAACAGCTGATATTAAAGACGGTTCCAGAGAAAATTATACTGCCTATTCGGAAAGGAGCTGCGGATCGTCCAAAGGTTCAACACATCCCTGAAATCCTCCATTTCTATGAAAAGTCATCCAAGAGAGACAAGTACTTGGCCTATACAGAGGGTTCTGGCGGGCAGCTCGTTCAAAATCTCCTGAAGATCGACACCAGATTGAATCATTTGTATAACATGGGCTTCGCTGCAATGCCAAGCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

601

Amino Acids

68.97

Weight (kDa)

9.4

Isoelectric Point (pI)

48.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 3 - 170 1.4e-44 NB-ARC domain
WHD_DRP PF23559 191 - 244 9.8e-11 Disease resistance protein Winged helix domain
LRR_14 PF23598 285 - 419 8.2e-27 Leucine-rich repeat region
LRR_8 PF13855 305 - 358 3.8e-06 Leucine rich repeat
LRR_4 PF12799 327 - 364 8.6e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1315
AccB1I GGYRCC 1 cut(s) 1315
AccBSI CCGCTC 1 cut(s) 77
AccII CGCG 1 cut(s) 1071
AciI CCGC 5 cut(s) 75, 799, 1069, 1619, 1716
AclWI GGATC 2 cut(s) 70, 1629
AcsI RAATTY 2 cut(s) 908, 994
AcuI CTGAAG 3 cut(s) 594, 840, 1760
AfaI GTAC 6 cut(s) 387, 971, 1139, 1191, 1317, 1691
AfiI CCNNNNNNNGG 2 cut(s) 51, 1343
AflII CTTAAG 1 cut(s) 982
AflIII ACRYGT 1 cut(s) 589
AjnI CCWGG 1 cut(s) 459
AleI CACNNNNGTG 1 cut(s) 479
Alw26I GTCTC 5 cut(s) 46, 109, 222, 878, 1677
AlwI GGATC 2 cut(s) 70, 1629
Ama87I CYCGRG 1 cut(s) 552
AoxI GGCC 1 cut(s) 1695
ApeKI GCWGC 5 cut(s) 761, 1506, 1616, 1720, 1784
ApoI RAATTY 2 cut(s) 908, 994
AseI ATTAAT 2 cut(s) 234, 1362
Asp700I GAANNNNTTC 1 cut(s) 500
Asp718I GGTACC 1 cut(s) 1315
AspLEI GCGC 1 cut(s) 1125
AsuHPI GGTGA 4 cut(s) 382, 437, 1163, 1483
AvaI CYCGRG 1 cut(s) 552
BaeI ACNNNNGTAYC 2 cut(s) 1173, 1206
BanI GGYRCC 1 cut(s) 1315
BbsI GAAGAC 3 cut(s) 174, 503, 694
BbvI GCAGC 5 cut(s) 748, 1493, 1603, 1732, 1771
BccI CCATC 3 cut(s) 49, 767, 1134
BceAI ACGGC 1 cut(s) 786
BciT130I CCWGG 1 cut(s) 461
BcoDI GTCTC 5 cut(s) 46, 109, 222, 878, 1677
BfaI CTAG 2 cut(s) 299, 923
BfmI CTRYAG 2 cut(s) 247, 1458
BfrI CTTAAG 1 cut(s) 982
BglII AGATCT 2 cut(s) 90, 860
BisI GCNGC 5 cut(s) 762, 1507, 1617, 1721, 1785
BlsI GCNGC 5 cut(s) 763, 1508, 1618, 1722, 1786
BmcAI AGTACT 1 cut(s) 1691
Bme1390I CCNGG 1 cut(s) 461
BmeT110I CYCGRG 1 cut(s) 552
BmiI GGNNCC 3 cut(s) 222, 1317, 1581
BmrFI CCNGG 1 cut(s) 461
BmrI ACTGGG 1 cut(s) 1541
BmsI GCATC 2 cut(s) 696, 1464
BmuI ACTGGG 1 cut(s) 1541
BpiI GAAGAC 3 cut(s) 174, 503, 694
BplI GAGNNNNNCTC 4 cut(s) 372, 404, 991, 1023
BpuEI CTTGAG 1 cut(s) 560
BsaBI GATNNNNATC 1 cut(s) 627
BsaJI CCNNGG 4 cut(s) 45, 459, 460, 1059
BsaWI WCCGGW 1 cut(s) 607
BsaXI ACNNNNNCTCC 2 cut(s) 923, 953
Bsc4I CCNNNNNNNGG 2 cut(s) 51, 1343
Bse1I ACTGG 3 cut(s) 1153, 1193, 1536
Bse3DI GCAATG 2 cut(s) 1523, 1794
Bse8I GATNNNNATC 1 cut(s) 627
BseBI CCWGG 1 cut(s) 461
BseDI CCNNGG 4 cut(s) 45, 459, 460, 1059
BseGI GGATG 9 cut(s) 60, 316, 511, 740, 1065, 1204, 1435, 1641, 1673
BseJI GATNNNNATC 1 cut(s) 627
BseLI CCNNNNNNNGG 2 cut(s) 51, 1343
BseMI GCAATG 2 cut(s) 1523, 1794
BseMII CTCAG 2 cut(s) 1022, 1435
BseNI ACTGG 3 cut(s) 1153, 1193, 1536
BseRI GAGGAG 2 cut(s) 230, 1015
BseXI GCAGC 5 cut(s) 748, 1493, 1603, 1732, 1771
Bsh1236I CGCG 1 cut(s) 1071
BshFI GGCC 1 cut(s) 1697
BshNI GGYRCC 1 cut(s) 1315
BsiHKCI CYCGRG 1 cut(s) 552
BsiSI CCGG 1 cut(s) 608
BslFI GGGAC 2 cut(s) 1195, 1265
BslI CCNNNNNNNGG 2 cut(s) 51, 1343
BsmAI GTCTC 5 cut(s) 46, 109, 222, 878, 1677
BsmFI GGGAC 2 cut(s) 1195, 1265
BsnI GGCC 1 cut(s) 1697
BsoBI CYCGRG 1 cut(s) 552
Bsp143I GATC 7 cut(s) 62, 90, 815, 860, 961, 1621, 1743
BspACI CCGC 5 cut(s) 75, 799, 1069, 1619, 1716
BspANI GGCC 1 cut(s) 1697
BspCNI CTCAG 2 cut(s) 1021, 1434
BspFNI CGCG 1 cut(s) 1071
BspHI TCATGA 1 cut(s) 240
BspLI GGNNCC 3 cut(s) 222, 1317, 1581
BspPI GGATC 2 cut(s) 70, 1629
BspT107I GGYRCC 1 cut(s) 1315
BspTI CTTAAG 1 cut(s) 982
BsrBI CCGCTC 1 cut(s) 77
BsrDI GCAATG 2 cut(s) 1523, 1794
BsrI ACTGG 3 cut(s) 1153, 1193, 1536
BssECI CCNNGG 4 cut(s) 45, 459, 460, 1059
BssMI GATC 7 cut(s) 62, 90, 815, 860, 961, 1621, 1743
BssT1I CCWWGG 1 cut(s) 1059
Bst2UI CCWGG 1 cut(s) 461
Bst4CI ACNGT 4 cut(s) 145, 449, 1142, 1579
BstAFI CTTAAG 1 cut(s) 982
BstAPI GCANNNNNTGC 1 cut(s) 419
BstC8I GCNNGC 5 cut(s) 415, 656, 729, 799, 1718
BstDEI CTNAG 4 cut(s) 87, 857, 1008, 1421
BstDSI CCRYGG 1 cut(s) 45
BstF5I GGATG 9 cut(s) 60, 316, 511, 740, 1065, 1204, 1435, 1641, 1673
BstFNI CGCG 1 cut(s) 1071
BstHHI GCGC 1 cut(s) 1125
BstKTI GATC 7 cut(s) 65, 93, 818, 863, 964, 1624, 1746
BstMAI GTCTC 5 cut(s) 46, 109, 222, 878, 1677
BstMBI GATC 7 cut(s) 62, 90, 815, 860, 961, 1621, 1743
BstMWI GCNNNNNNNGC 5 cut(s) 83, 419, 794, 1417, 1426
BstNI CCWGG 1 cut(s) 461
BstNSI RCATGY 5 cut(s) 593, 658, 1236, 1499, 1513
BstSCI CCNGG 1 cut(s) 459
BstSFI CTRYAG 2 cut(s) 247, 1458
BstUI CGCG 1 cut(s) 1071
BstV1I GCAGC 5 cut(s) 748, 1493, 1603, 1732, 1771
BstV2I GAAGAC 3 cut(s) 174, 503, 694
BstX2I RGATCY 3 cut(s) 62, 90, 860
BstYI RGATCY 3 cut(s) 62, 90, 860
BsuRI GGCC 1 cut(s) 1697
BtgI CCRYGG 1 cut(s) 45
BtsCI GGATG 9 cut(s) 60, 316, 511, 740, 1065, 1204, 1435, 1641, 1673
BtsI GCAGTG 1 cut(s) 1331
BtsIMutI CAGTG 4 cut(s) 1146, 1200, 1331, 1529
Cac8I GCNNGC 5 cut(s) 415, 656, 729, 799, 1718
CciI TCATGA 1 cut(s) 240
CfoI GCGC 1 cut(s) 1125
Csp6I GTAC 6 cut(s) 386, 970, 1138, 1190, 1316, 1690
CviQI GTAC 6 cut(s) 386, 970, 1138, 1190, 1316, 1690
DdeI CTNAG 4 cut(s) 87, 857, 1008, 1421
DpnI GATC 7 cut(s) 64, 92, 817, 862, 963, 1623, 1745
DpnII GATC 7 cut(s) 62, 90, 815, 860, 961, 1621, 1743
DraI TTTAAA 1 cut(s) 993
Eco130I CCWWGG 1 cut(s) 1059
Eco32I GATATC 2 cut(s) 629, 1349
Eco57I CTGAAG 3 cut(s) 594, 840, 1760
Eco88I CYCGRG 1 cut(s) 552
EcoRII CCWGG 1 cut(s) 459
EcoRV GATATC 2 cut(s) 629, 1349
EcoT14I CCWWGG 1 cut(s) 1059
EcoT22I ATGCAT 2 cut(s) 136, 711
ErhI CCWWGG 1 cut(s) 1059
FalI AAGNNNNNCTT 2 cut(s) 880, 912
FaqI GGGAC 2 cut(s) 1195, 1265
FauI CCCGC 2 cut(s) 806, 1709
FauNDI CATATG 1 cut(s) 547
Fnu4HI GCNGC 5 cut(s) 762, 1507, 1617, 1721, 1785
FokI GGATG 9 cut(s) 67, 323, 498, 727, 1052, 1211, 1422, 1628, 1660
Fsp4HI GCNGC 5 cut(s) 762, 1507, 1617, 1721, 1785
FspBI CTAG 2 cut(s) 299, 923
GlaI GCGC 1 cut(s) 1124
GluI GCNGC 5 cut(s) 762, 1507, 1617, 1721, 1785
HaeIII GGCC 1 cut(s) 1697
HapII CCGG 1 cut(s) 608
HhaI GCGC 1 cut(s) 1125
Hin6I GCGC 1 cut(s) 1123
HinP1I GCGC 1 cut(s) 1123
HincII GTYRAC 1 cut(s) 1446
HindII GTYRAC 1 cut(s) 1446
HindIII AAGCTT 1 cut(s) 181
HinfI GANTC 5 cut(s) 203, 265, 284, 1117, 1759
HpaII CCGG 1 cut(s) 608
HphI GGTGA 4 cut(s) 382, 437, 1163, 1483
Hpy166II GTNNAC 4 cut(s) 274, 445, 530, 1446
Hpy188I TCNGA 7 cut(s) 399, 574, 745, 820, 901, 1011, 1608
Hpy188III TCNNGA 7 cut(s) 241, 359, 554, 1375, 1538, 1583, 1738
Hpy8I GTNNAC 4 cut(s) 274, 445, 530, 1446
HpyAV CCTTC 7 cut(s) 205, 463, 569, 815, 906, 1061, 1241
HpyCH4III ACNGT 4 cut(s) 145, 449, 1142, 1579
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 419, 794, 1417, 1426
HpyF3I CTNAG 4 cut(s) 87, 857, 1008, 1421
HspAI GCGC 1 cut(s) 1123
KpnI GGTACC 1 cut(s) 1319
Kzo9I GATC 7 cut(s) 62, 90, 815, 860, 961, 1621, 1743
LmnI GCTCC 3 cut(s) 321, 1018, 1613
Lsp1109I GCAGC 5 cut(s) 748, 1493, 1603, 1732, 1771
LweI GCATC 2 cut(s) 696, 1464
MaeI CTAG 2 cut(s) 299, 923
MaeIII GTNAC 4 cut(s) 139, 601, 1142, 1270
MalI GATC 7 cut(s) 64, 92, 817, 862, 963, 1623, 1745
MbiI CCGCTC 1 cut(s) 77
MboI GATC 7 cut(s) 62, 90, 815, 860, 961, 1621, 1743
MboII GAAGA 7 cut(s) 85, 179, 508, 699, 1277, 1547, 1753
MfeI CAATTG 2 cut(s) 124, 789
MflI RGATCY 3 cut(s) 62, 90, 860
MlyI GAGTC 1 cut(s) 278
Mph1103I ATGCAT 2 cut(s) 136, 711
MroXI GAANNNNTTC 1 cut(s) 500
MseI TTAA 7 cut(s) 234, 983, 992, 1014, 1362, 1517, 1571
MslI CAYNNNNRTG 3 cut(s) 479, 1494, 1662
MspA1I CMGCKG 2 cut(s) 1384, 1564
MspCI CTTAAG 1 cut(s) 982
MspI CCGG 1 cut(s) 608
MspR9I CCNGG 1 cut(s) 461
MunI CAATTG 2 cut(s) 124, 789
MvaI CCWGG 1 cut(s) 461
MvnI CGCG 1 cut(s) 1071
MwoI GCNNNNNNNGC 5 cut(s) 83, 419, 794, 1417, 1426
NdeI CATATG 1 cut(s) 547
NdeII GATC 7 cut(s) 62, 90, 815, 860, 961, 1621, 1743
NlaIV GGNNCC 3 cut(s) 222, 1317, 1581
NmuCI GTSAC 1 cut(s) 601
NsiI ATGCAT 2 cut(s) 136, 711
NspI RCATGY 5 cut(s) 593, 658, 1236, 1499, 1513
OliI CACNNNNGTG 1 cut(s) 479
PaeI GCATGC 1 cut(s) 658
PagI TCATGA 1 cut(s) 240
PasI CCCWGGG 1 cut(s) 460
PciI ACATGT 1 cut(s) 589
PdmI GAANNNNTTC 1 cut(s) 500
PfeI GAWTC 4 cut(s) 203, 265, 1117, 1759
PkrI GCNGC 5 cut(s) 763, 1508, 1618, 1722, 1786
PleI GAGTC 1 cut(s) 278
PpsI GAGTC 1 cut(s) 278
PscI ACATGT 1 cut(s) 589
PshBI ATTAAT 2 cut(s) 234, 1362
Psp6I CCWGG 1 cut(s) 459
PspGI CCWGG 1 cut(s) 459
PspN4I GGNNCC 3 cut(s) 222, 1317, 1581
PsuI RGATCY 3 cut(s) 62, 90, 860
PvuII CAGCTG 2 cut(s) 1384, 1564
RsaI GTAC 6 cut(s) 387, 971, 1139, 1191, 1317, 1691
RsaNI GTAC 6 cut(s) 386, 970, 1138, 1190, 1316, 1690
RseI CAYNNNNRTG 3 cut(s) 479, 1494, 1662
SaqAI TTAA 7 cut(s) 234, 983, 992, 1014, 1362, 1517, 1571
SatI GCNGC 5 cut(s) 762, 1507, 1617, 1721, 1785
Sau3AI GATC 7 cut(s) 62, 90, 815, 860, 961, 1621, 1743
ScaI AGTACT 1 cut(s) 1691
SchI GAGTC 1 cut(s) 278
ScrFI CCNGG 1 cut(s) 461
SfaNI GCATC 2 cut(s) 696, 1464
SfcI CTRYAG 2 cut(s) 247, 1458
SmiI ATTTAAAT 1 cut(s) 993
SmiMI CAYNNNNRTG 3 cut(s) 479, 1494, 1662
SmlI CTYRAG 2 cut(s) 539, 982
SmoI CTYRAG 2 cut(s) 539, 982
SphI GCATGC 1 cut(s) 658
SsiI CCGC 5 cut(s) 75, 799, 1069, 1619, 1716
SspMI CTAG 2 cut(s) 299, 923
StyD4I CCNGG 1 cut(s) 459
StyI CCWWGG 1 cut(s) 1059
SwaI ATTTAAAT 1 cut(s) 993
TaaI ACNGT 4 cut(s) 145, 449, 1142, 1579
TaqI TCGA 3 cut(s) 379, 814, 1746
TatI WGTACW 2 cut(s) 385, 1689
TfiI GAWTC 4 cut(s) 203, 265, 1117, 1759
Tru1I TTAA 7 cut(s) 234, 983, 992, 1014, 1362, 1517, 1571
Tru9I TTAA 7 cut(s) 234, 983, 992, 1014, 1362, 1517, 1571
TscAI CASTG 4 cut(s) 1153, 1200, 1338, 1536
TseFI GTSAC 1 cut(s) 601
TseI GCWGC 5 cut(s) 761, 1506, 1616, 1720, 1784
Tsp45I GTSAC 1 cut(s) 601
TspDTI ATGAA 6 cut(s) 216, 693, 798, 1226, 1277, 1680
TspGWI ACGGA 1 cut(s) 34
TspRI CASTG 4 cut(s) 1153, 1200, 1338, 1536
Vha464I CTTAAG 1 cut(s) 982
VspI ATTAAT 2 cut(s) 234, 1362
XapI RAATTY 2 cut(s) 908, 994
XceI RCATGY 5 cut(s) 593, 658, 1236, 1499, 1513
XcmI CCANNNNNNNNNTGG 1 cut(s) 43
XmnI GAANNNNTTC 1 cut(s) 500
XspI CTAG 2 cut(s) 299, 923
ZrmI AGTACT 1 cut(s) 1691
Zsp2I ATGCAT 2 cut(s) 136, 711
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.