RLG00000032367

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
14079972 .. 14080805
834 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032367

Sequence Viewer

Length: 594 bp
ATGACTCAACTTAAGAGCATCGGCATATCGAATTTGAAAGAACAAGATGGGATTGACCTTTGGGTCTCAATTGAAAAGTTGAATATGCTTCAATCTATGGTTTTAATCCCAAGTAATGAAGAGGAAATTCTTCCGGTGAAAGCACAATGTCCAGCTCTTCCGCACCTTCGAAAGCTTGCATTGGTTGGCAGACTCCAAAACAGTCTCACAGCTCTGATTCTGCATTGGTCTAGACTTGAAGAGGATTTACTACCTCAAATTGAAGCACTGCCCAATCTGACAAGGCTTCAACTTTGTAGTACATATGTTGGGGAAGTGTTGTGTTTCCGCAGAGGCTTTGTAATGCTGGAGGGGTTGGAGTTGTTGAATTTTGACCCTGTGAAAGTGATAACTATAGAAAAAGGGGTGATGCCAAATCTCCGGCACTTAACTGTTGCCCGCTTCATGGAGTTGAAGACAGTGCCACTGGGCCTTGAATATCTTTCTAAACTACAAACTTTGGACCTGAAAGATCTTCCCATGGAAGTTATACAGCCCATTCGGAAAGGAGGTGCAGATCGCTTTAAGAATCAATCAAAGTCCGAGAAGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

198

Amino Acids

22.41

Weight (kDa)

7.7

Isoelectric Point (pI)

51.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 11 - 168 7.5e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 62
AciI CCGC 3 cut(s) 161, 328, 439
AcsI RAATTY 3 cut(s) 31, 126, 367
AfaI GTAC 1 cut(s) 301
AfiI CCNNNNNNNGG 1 cut(s) 445
AflII CTTAAG 1 cut(s) 11
AluBI AGCT 3 cut(s) 155, 175, 212
AluI AGCT 3 cut(s) 155, 175, 212
Alw26I GTCTC 2 cut(s) 70, 209
AoxI GGCC 1 cut(s) 469
ApoI RAATTY 3 cut(s) 31, 126, 367
Asp700I GAANNNNTTC 1 cut(s) 129
AspS9I GGNCC 2 cut(s) 469, 502
AsuHPI GGTGA 2 cut(s) 148, 418
AsuII TTCGAA 1 cut(s) 169
AvaII GGWCC 1 cut(s) 502
BarI GAAGNNNNNNTAC 2 cut(s) 231, 263
BbsI GAAGAC 1 cut(s) 461
BccI CCATC 1 cut(s) 41
BcoDI GTCTC 2 cut(s) 70, 209
BfaI CTAG 1 cut(s) 231
BfmI CTRYAG 1 cut(s) 393
BfrI CTTAAG 1 cut(s) 11
BglII AGATCT 1 cut(s) 511
Bme18I GGWCC 1 cut(s) 502
BmgT120I GGNCC 2 cut(s) 469, 502
BmrI ACTGGG 1 cut(s) 476
BmsI GCATC 2 cut(s) 27, 399
BmuI ACTGGG 1 cut(s) 476
BpiI GAAGAC 1 cut(s) 461
BpmI CTGGAG 1 cut(s) 368
Bpu14I TTCGAA 1 cut(s) 169
BsaI GGTCTC 1 cut(s) 70
BsaJI CCNNGG 1 cut(s) 519
BsaWI WCCGGW 1 cut(s) 133
Bsc4I CCNNNNNNNGG 1 cut(s) 445
Bse1I ACTGG 1 cut(s) 471
BseDI CCNNGG 1 cut(s) 519
BseLI CCNNNNNNNGG 1 cut(s) 445
BseNI ACTGG 1 cut(s) 471
BsgI GTGCAG 1 cut(s) 573
BshFI GGCC 1 cut(s) 471
BsiSI CCGG 2 cut(s) 134, 421
BslI CCNNNNNNNGG 1 cut(s) 445
BsmAI GTCTC 2 cut(s) 70, 209
BsnI GGCC 1 cut(s) 471
Bso31I GGTCTC 1 cut(s) 70
Bsp119I TTCGAA 1 cut(s) 169
Bsp143I GATC 2 cut(s) 511, 556
Bsp19I CCATGG 1 cut(s) 519
BspACI CCGC 3 cut(s) 161, 328, 439
BspANI GGCC 1 cut(s) 471
BspQI GCTCTTC 1 cut(s) 162
BspT104I TTCGAA 1 cut(s) 169
BspTI CTTAAG 1 cut(s) 11
BspTNI GGTCTC 1 cut(s) 70
BsrI ACTGG 1 cut(s) 471
BssECI CCNNGG 1 cut(s) 519
BssMI GATC 2 cut(s) 511, 556
BssT1I CCWWGG 1 cut(s) 519
Bst4CI ACNGT 3 cut(s) 203, 433, 460
Bst6I CTCTTC 3 cut(s) 114, 162, 234
BstAFI CTTAAG 1 cut(s) 11
BstBI TTCGAA 1 cut(s) 169
BstC8I GCNNGC 2 cut(s) 177, 439
BstDSI CCRYGG 1 cut(s) 519
BstKTI GATC 2 cut(s) 514, 559
BstMAI GTCTC 2 cut(s) 70, 209
BstMBI GATC 2 cut(s) 511, 556
BstSFI CTRYAG 1 cut(s) 393
BstV2I GAAGAC 1 cut(s) 461
BstX2I RGATCY 1 cut(s) 511
BstYI RGATCY 1 cut(s) 511
BsuRI GGCC 1 cut(s) 471
BtgI CCRYGG 1 cut(s) 519
BtsI GCAGTG 1 cut(s) 266
BtsIMutI CAGTG 3 cut(s) 266, 464, 465
Cac8I GCNNGC 2 cut(s) 177, 439
Cfr13I GGNCC 2 cut(s) 469, 502
Csp6I GTAC 1 cut(s) 300
CviAII CATG 2 cut(s) 445, 520
CviJI RGCY 7 cut(s) 155, 175, 212, 286, 336, 471, 535
CviKI_1 RGCY 7 cut(s) 155, 175, 212, 286, 336, 471, 535
CviQI GTAC 1 cut(s) 300
DpnI GATC 2 cut(s) 513, 558
DpnII GATC 2 cut(s) 511, 556
DrdI GACNNNNNNGTC 1 cut(s) 62
DseDI GACNNNNNNGTC 1 cut(s) 62
Eam1104I CTCTTC 3 cut(s) 114, 162, 234
EarI CTCTTC 3 cut(s) 114, 162, 234
Eco130I CCWWGG 1 cut(s) 519
Eco31I GGTCTC 1 cut(s) 70
Eco47I GGWCC 1 cut(s) 502
EcoT14I CCWWGG 1 cut(s) 519
ErhI CCWWGG 1 cut(s) 519
FaeI CATG 2 cut(s) 448, 523
FaiI YATR 9 cut(s) 26, 86, 98, 304, 306, 395, 446, 521, 530
FatI CATG 2 cut(s) 444, 519
FauI CCCGC 1 cut(s) 446
FauNDI CATATG 1 cut(s) 304
FspBI CTAG 1 cut(s) 231
GsuI CTGGAG 1 cut(s) 368
HaeIII GGCC 1 cut(s) 471
HapII CCGG 2 cut(s) 134, 421
Hin1II CATG 2 cut(s) 448, 523
HindIII AAGCTT 1 cut(s) 173
HinfI GANTC 4 cut(s) 4, 192, 217, 568
HpaII CCGG 2 cut(s) 134, 421
HphI GGTGA 2 cut(s) 148, 418
Hpy188I TCNGA 4 cut(s) 216, 279, 543, 583
Hpy188III TCNNGA 1 cut(s) 231
HpyAV CCTTC 1 cut(s) 176
HpyCH4III ACNGT 3 cut(s) 203, 433, 460
HpyCH4V TGCA 3 cut(s) 179, 223, 554
Hsp92II CATG 2 cut(s) 448, 523
Kzo9I GATC 2 cut(s) 511, 556
LguI GCTCTTC 1 cut(s) 162
LpnPI CCDG 7 cut(s) 147, 165, 332, 390, 434, 452, 518
LweI GCATC 2 cut(s) 27, 399
MaeI CTAG 1 cut(s) 231
MalI GATC 2 cut(s) 513, 558
MboI GATC 2 cut(s) 511, 556
MboII GAAGA 6 cut(s) 122, 131, 149, 251, 466, 506
MfeI CAATTG 1 cut(s) 69
MflI RGATCY 1 cut(s) 511
MluCI AATT 5 cut(s) 31, 69, 126, 258, 367
MlyI GAGTC 1 cut(s) 186
MmeI TCCRAC 1 cut(s) 336
MnlI CCTC 6 cut(s) 115, 235, 264, 326, 343, 542
MroXI GAANNNNTTC 1 cut(s) 129
MseI TTAA 4 cut(s) 12, 104, 428, 564
MspCI CTTAAG 1 cut(s) 11
MspI CCGG 2 cut(s) 134, 421
MunI CAATTG 1 cut(s) 69
NcoI CCATGG 1 cut(s) 519
NdeI CATATG 1 cut(s) 304
NdeII GATC 2 cut(s) 511, 556
NlaIII CATG 2 cut(s) 448, 523
NspV TTCGAA 1 cut(s) 169
PciSI GCTCTTC 1 cut(s) 162
PdmI GAANNNNTTC 1 cut(s) 129
PfeI GAWTC 2 cut(s) 217, 568
PleI GAGTC 1 cut(s) 186
PpsI GAGTC 1 cut(s) 186
PspPI GGNCC 2 cut(s) 469, 502
PsuI RGATCY 1 cut(s) 511
RsaI GTAC 1 cut(s) 301
RsaNI GTAC 1 cut(s) 300
SapI GCTCTTC 1 cut(s) 162
SaqAI TTAA 4 cut(s) 12, 104, 428, 564
Sau3AI GATC 2 cut(s) 511, 556
Sau96I GGNCC 2 cut(s) 469, 502
SchI GAGTC 1 cut(s) 186
SetI ASST 8 cut(s) 60, 157, 168, 177, 214, 256, 507, 553
SfaNI GCATC 2 cut(s) 27, 399
SfcI CTRYAG 1 cut(s) 393
SfuI TTCGAA 1 cut(s) 169
SinI GGWCC 1 cut(s) 502
SmlI CTYRAG 1 cut(s) 11
SmoI CTYRAG 1 cut(s) 11
Sse9I AATT 5 cut(s) 31, 69, 126, 258, 367
SsiI CCGC 3 cut(s) 161, 328, 439
SspMI CTAG 1 cut(s) 231
StyI CCWWGG 1 cut(s) 519
TaaI ACNGT 3 cut(s) 203, 433, 460
TaqI TCGA 2 cut(s) 29, 169
TasI AATT 5 cut(s) 31, 69, 126, 258, 367
TatI WGTACW 1 cut(s) 299
TfiI GAWTC 2 cut(s) 217, 568
Tru1I TTAA 4 cut(s) 12, 104, 428, 564
Tru9I TTAA 4 cut(s) 12, 104, 428, 564
TscAI CASTG 3 cut(s) 273, 465, 471
TspDTI ATGAA 2 cut(s) 132, 433
TspRI CASTG 3 cut(s) 273, 465, 471
Vha464I CTTAAG 1 cut(s) 11
VpaK11BI GGWCC 1 cut(s) 502
XapI RAATTY 3 cut(s) 31, 126, 367
XbaI TCTAGA 1 cut(s) 230
XmnI GAANNNNTTC 1 cut(s) 129
XspI CTAG 1 cut(s) 231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.