Prupe.6G200400_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000110
Physical Location & Seq
Reverse (-)
20800504 .. 20803377
2874 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G200400.1

Sequence Viewer

Length: 2229 bp
ATGTATCGCGTGTACGAGCAGCGAAATGGTGGTCGATTTTCCAGGTGGATCCACAAAACCATTCACTTTCCAAAGCACCTGTGGTATAAGCGTCAAATAGCCAACAAGTTACAGAAAATCGCGGTGGCGATTCGAGCTATTCCAGAGAGAAATCAGAGATATCGTGGTGCTGCAGCTGTAGAAGGAAAAAGTACTTCTGAGGATATTCGGAGATGGGTGCAGAACCAAGCGGAGTCTTCTCTTTATCAGAAGGAGGATGAACTTGTCGGGATTGAAGGCGATAAGAACATGTTACTGGGATGGCTGATGGATGAAGCGAAGCACCAAACTGTTGTGTCCGTGGTCGGGATGGGAGGATCAGGGAAGACAACTCTAGTTGTAAGGACCTTCAAAGATGACATTGTAAAGAGACATTTCGAATGCTATGCGTGGATTACTGTTTCCCAGTCTTACGTGATTGAAGACTTATTTAGAAGATTGATCAAAGAATTCCACAAAGCGAAGAAGGAAGAGGTCCCTGCAGCCATGAATGCCATGAGTTATAACGAATTGCTGGAGATGTTGGTGAACTACTTGGAGACTAAAAGGTACCTAATTGTATTGGATGACGTGTGGGATGTCCATCTTTGGGACAAAATAAGGTTTTCATTTCCAGATAAACAACTTGGAAGTCGAGTCATGCTTACAACTCGAAGAGAAGACATAGCATCCTCTTCTTTTGGAGTTGAAAGCCATGTTCACAAGATTCGACCGCTGGAAAGGAGTGATGCTTGGGTGCTCTTCAGCATGAAAGCATTCTCAAGTTACCCTAACAAATCTTGTTCACCTGAACTTCTGCCATTAGCTCGGGAACTTGTGGAAAAGTGTGAAGGCCTACCACTTGCGATCGTAGCCTTGAGTGGTCTTATGTCTTCGAAGAAGTCACTTACAGAGTGGAGCACAGCCTACAACAGCTTAAATTGGCATTTGACTAACAATCCTTTGCTAGAACCTATGAAGAGCATCTTGTTGTTTAGTTTTAATGATTTGCCATACCGACTGAAGCAATGCTTTCTATATTGTTCCCTTTTCCCCGAAGATACAGTGATCATAAATAATAGGGTCATTAGATTGTGGATCGCTGAAGGATTTGTTGAACATGTCGAAGGGCTCACGCCAGAAGAAGTTGCAAATAGCTATCTTATGGAACTCATTTTTCGTAACATGCTACAGGAAAGGTTTTATGGATCCCTCCCAGCATGTAAGATGCATGATCTTTTGAGGGAGATTGCTCTGTCTATAGCAAAAAAAGAAAAGTTTCTTGCTGTACTTGATGGGAGTGAAACAGTAGAAGAAACTGGGGCACTCCGTTTGTATATCACGGCTTCGTTCGTTTCTCATCTTTGCCACTGGCATTTGGAGGATGTCCCACTTGATTATCTGCCAGACAATCTAACATCCTTATTTAATTTAAAATATTTAAATTTGTGTGGAACTCCAATTACAGAGCTTCCAGAATCCATTGGAAAGCTCCGCAATCTTCAGACCTTGAACATCATGGCAACAAAAATAAAGGCACTTCCAAGAGGGATTTCCAAGTTGCTAAGCTTACGCCATTTACTTATGGGTCCATACTATGATGGTTTTTGGGTAAAAATACCATCAAGTATTGGTAAGATGAAGAAATTGCAATCTTTGGCATTTATTGAATCAGAAGGAAACATTATTAGACTTATTGGAAGTATGACCCAGCTTACGTTCCTTGGCATTACAAATGTGAAAGAAAGAGACGAGGAGGACCTATGTGCCTTAATTCAAGAGATGAAGGTCCTTTCCCGCTTGTTTTTATTTGTAGCTGATGGAGAGGAATTTCTTCGAGTTGACGCATTGTCTTCACCGCCTCCCTACCTTGATAGAATTTACTTGACCGGAAAACTGGAAAAGGTACCACATTGGTTTTGTTCACTCCACTCTCTCAGAAATTTGTATCTGAATAATGCCTCTGTTAGGAATCTCGCATTATTAAATAAGATAACTATAGAAAAAGGGGCCATGCCAAATTTCGAGTTCCTAGAGATTCATAGTTGCATGACGTTAGAAACATTGCCACAGGGTATTGAGCACCTTACTAAACTACAACGATACACTTTTGATAATGCTTCAGAGGAGTTTATGGAGTCCATAAAAGAAGGAGGTGTGGATCATGCAAGGATGCTACTCGTCGACGAGAGATGTAAGAAATATACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

743

Amino Acids

85.59

Weight (kDa)

7.88

Isoelectric Point (pI)

49.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 543
Acc65I GGTACC 2 cut(s) 588, 1924
AccB1I GGYRCC 2 cut(s) 588, 1924
AccI GTMKAC 1 cut(s) 2202
AccII CGCG 2 cut(s) 9, 122
AciI CCGC 6 cut(s) 122, 230, 752, 1513, 1816, 1877
AclWI GGATC 7 cut(s) 43, 56, 364, 1124, 1221, 1234, 2187
AcsI RAATTY 6 cut(s) 488, 1462, 1847, 1896, 1960, 2038
AcuI CTGAAG 5 cut(s) 766, 1061, 1143, 1505, 2124
AfaI GTAC 5 cut(s) 14, 193, 590, 1308, 1926
AfiI CCNNNNNNNGG 3 cut(s) 345, 628, 1986
AflIII ACRYGT 3 cut(s) 288, 609, 1138
AgsI TTSAA 8 cut(s) 275, 391, 461, 728, 1136, 1531, 1688, 1796
AhdI GACNNNNNGTC 1 cut(s) 1867
AjiI CACGTC 1 cut(s) 610
AjnI CCWGG 1 cut(s) 41
AjuI GAANNNNNNNTTGG 2 cut(s) 1555, 1587
Alw21I GWGCWC 3 cut(s) 780, 941, 2103
Alw26I GTCTC 3 cut(s) 403, 572, 1761
AlwI GGATC 7 cut(s) 43, 56, 364, 1124, 1221, 1234, 2187
Ama87I CYCGRG 1 cut(s) 846
AoxI GGCC 2 cut(s) 871, 2028
ApeKI GCWGC 4 cut(s) 19, 170, 173, 521
ApoI RAATTY 6 cut(s) 488, 1462, 1847, 1896, 1960, 2038
ArsI GACNNNNNNTTYG 2 cut(s) 16, 48
Asp700I GAANNNNTTC 3 cut(s) 794, 1296, 1851
Asp718I GGTACC 2 cut(s) 588, 1924
AspS9I GGNCC 6 cut(s) 384, 514, 1607, 1777, 1807, 2028
AsuHPI GGTGA 3 cut(s) 577, 816, 1866
AsuII TTCGAA 2 cut(s) 417, 914
AvaI CYCGRG 1 cut(s) 846
AvaII GGWCC 5 cut(s) 384, 514, 1607, 1777, 1807
BaeGI GKGCMC 1 cut(s) 1345
BamHI GGATCC 2 cut(s) 48, 1226
BanI GGYRCC 2 cut(s) 588, 1924
BanII GRGCYC 1 cut(s) 1152
BbsI GAAGAC 6 cut(s) 228, 371, 468, 705, 903, 1863
Bbv12I GWGCWC 3 cut(s) 780, 941, 2103
BbvI GCAGC 4 cut(s) 31, 157, 185, 533
BccI CCATC 9 cut(s) 207, 294, 301, 343, 630, 1307, 1613, 1648, 1832
BceAI ACGGC 1 cut(s) 1377
BcgI CGANNNNNNTGC 2 cut(s) 407, 441
BciT130I CCWGG 1 cut(s) 43
BclI TGATCA 2 cut(s) 480, 1086
BcoDI GTCTC 3 cut(s) 403, 572, 1761
BfaI CTAG 3 cut(s) 374, 986, 2051
BfmI CTRYAG 6 cut(s) 171, 177, 519, 1208, 1278, 2016
BisI GCNGC 4 cut(s) 20, 171, 174, 522
BlpI GCTNAGC 1 cut(s) 1583
BlsI GCNGC 4 cut(s) 21, 172, 175, 523
BmcAI AGTACT 1 cut(s) 193
Bme1390I CCNGG 1 cut(s) 43
Bme18I GGWCC 5 cut(s) 384, 514, 1607, 1777, 1807
BmeRI GACNNNNNGTC 1 cut(s) 1867
BmeT110I CYCGRG 1 cut(s) 846
BmgBI CACGTC 1 cut(s) 610
BmgT120I GGNCC 6 cut(s) 384, 514, 1607, 1777, 1807, 2028
BmiI GGNNCC 7 cut(s) 50, 516, 590, 1228, 1608, 1926, 2029
BmrFI CCNGG 1 cut(s) 43
BmrI ACTGGG 3 cut(s) 305, 439, 1347
BmsI GCATC 5 cut(s) 716, 757, 1011, 1236, 2181
BmuI ACTGGG 3 cut(s) 305, 439, 1347
BpiI GAAGAC 6 cut(s) 228, 371, 468, 705, 903, 1863
BpmI CTGGAG 1 cut(s) 575
Bpu1102I GCTNAGC 1 cut(s) 1583
Bpu14I TTCGAA 2 cut(s) 417, 914
BpuEI CTTGAG 2 cut(s) 784, 916
BsaAI YACGTR 2 cut(s) 454, 2226
BsaBI GATNNNNATC 1 cut(s) 621
BsaJI CCNNGG 2 cut(s) 339, 1741
BsaWI WCCGGW 1 cut(s) 1907
Bsc4I CCNNNNNNNGG 3 cut(s) 345, 628, 1986
Bse1I ACTGG 5 cut(s) 300, 445, 1342, 1394, 1920
Bse3DI GCAATG 2 cut(s) 1052, 2081
Bse8I GATNNNNATC 1 cut(s) 621
BseBI CCWGG 1 cut(s) 43
BseDI CCNNGG 2 cut(s) 339, 1741
BseJI GATNNNNATC 1 cut(s) 621
BseLI CCNNNNNNNGG 3 cut(s) 345, 628, 1986
BseMI GCAATG 2 cut(s) 1052, 2081
BseMII CTCAG 2 cut(s) 189, 1969
BseNI ACTGG 5 cut(s) 300, 445, 1342, 1394, 1920
BseRI GAGGAG 2 cut(s) 1787, 2159
BseSI GKGCMC 1 cut(s) 1345
BseXI GCAGC 4 cut(s) 31, 157, 185, 533
BseYI CCCAGC 2 cut(s) 1234, 1728
BsgI GTGCAG 1 cut(s) 239
Bsh1236I CGCG 2 cut(s) 9, 122
Bsh1285I CGRYCG 2 cut(s) 752, 888
BshFI GGCC 2 cut(s) 873, 2030
BshNI GGYRCC 2 cut(s) 588, 1924
BsiEI CGRYCG 2 cut(s) 752, 888
BsiHKAI GWGCWC 3 cut(s) 780, 941, 2103
BsiHKCI CYCGRG 1 cut(s) 846
BsiSI CCGG 1 cut(s) 1908
BslFI GGGAC 3 cut(s) 500, 644, 1391
BslI CCNNNNNNNGG 3 cut(s) 345, 628, 1986
BsmAI GTCTC 3 cut(s) 403, 572, 1761
BsmBI CGTCTC 1 cut(s) 1761
BsmFI GGGAC 3 cut(s) 500, 644, 1391
BsmI GAATGC 3 cut(s) 425, 535, 794
BsnI GGCC 2 cut(s) 873, 2030
BsoBI CYCGRG 1 cut(s) 846
Bsp119I TTCGAA 2 cut(s) 417, 914
Bsp1286I GDGCHC 5 cut(s) 780, 941, 1152, 1345, 2103
Bsp143I GATC 9 cut(s) 48, 356, 480, 885, 1086, 1116, 1226, 1252, 2179
Bsp1720I GCTNAGC 1 cut(s) 1583
BspACI CCGC 6 cut(s) 122, 230, 752, 1513, 1816, 1877
BspANI GGCC 2 cut(s) 873, 2030
BspCNI CTCAG 2 cut(s) 190, 1968
BspFNI CGCG 2 cut(s) 9, 122
BspLI GGNNCC 7 cut(s) 50, 516, 590, 1228, 1608, 1926, 2029
BspMAI CTGCAG 2 cut(s) 175, 523
BspPI GGATC 7 cut(s) 43, 56, 364, 1124, 1221, 1234, 2187
BspQI GCTCTTC 2 cut(s) 785, 992
BspT104I TTCGAA 2 cut(s) 417, 914
BspT107I GGYRCC 2 cut(s) 588, 1924
BsrDI GCAATG 2 cut(s) 1052, 2081
BsrI ACTGG 5 cut(s) 300, 445, 1342, 1394, 1920
BssECI CCNNGG 2 cut(s) 339, 1741
BssMI GATC 9 cut(s) 48, 356, 480, 885, 1086, 1116, 1226, 1252, 2179
BssT1I CCWWGG 1 cut(s) 1741
Bst2UI CCWGG 1 cut(s) 43
Bst4CI ACNGT 4 cut(s) 331, 439, 1084, 1327
Bst6I CTCTTC 5 cut(s) 504, 688, 718, 785, 992
BstBAI YACGTR 2 cut(s) 454, 2226
BstBI TTCGAA 2 cut(s) 417, 914
BstDEI CTNAG 3 cut(s) 198, 1583, 1955
BstDSI CCRYGG 1 cut(s) 339
BstENI CCTNNNNNAGG 1 cut(s) 1984
BstFNI CGCG 2 cut(s) 9, 122
BstKTI GATC 9 cut(s) 51, 359, 483, 888, 1089, 1119, 1229, 1255, 2182
BstMAI GTCTC 3 cut(s) 403, 572, 1761
BstMBI GATC 9 cut(s) 48, 356, 480, 885, 1086, 1116, 1226, 1252, 2179
BstMCI CGRYCG 2 cut(s) 752, 888
BstMWI GCNNNNNNNGC 3 cut(s) 134, 530, 890
BstNI CCWGG 1 cut(s) 43
BstNSI RCATGY 4 cut(s) 292, 1142, 1207, 1242
BstSCI CCNGG 1 cut(s) 41
BstSFI CTRYAG 6 cut(s) 171, 177, 519, 1208, 1278, 2016
BstSLI GKGCMC 1 cut(s) 1345
BstSNI TACGTA 1 cut(s) 2226
BstUI CGCG 2 cut(s) 9, 122
BstV1I GCAGC 4 cut(s) 31, 157, 185, 533
BstV2I GAAGAC 6 cut(s) 228, 371, 468, 705, 903, 1863
BstX2I RGATCY 2 cut(s) 48, 1226
BstYI RGATCY 2 cut(s) 48, 1226
BsuRI GGCC 2 cut(s) 873, 2030
BtgI CCRYGG 1 cut(s) 339
BtrI CACGTC 1 cut(s) 610
BtsIMutI CAGTG 2 cut(s) 1089, 1387
Cfr13I GGNCC 6 cut(s) 384, 514, 1607, 1777, 1807, 2028
CseI GACGC 2 cut(s) 80, 1871
Csp6I GTAC 5 cut(s) 13, 192, 589, 1307, 1925
CviQI GTAC 5 cut(s) 13, 192, 589, 1307, 1925
DdeI CTNAG 3 cut(s) 198, 1583, 1955
DpnI GATC 9 cut(s) 50, 358, 482, 887, 1088, 1118, 1228, 1254, 2181
DpnII GATC 9 cut(s) 48, 356, 480, 885, 1086, 1116, 1226, 1252, 2179
DraI TTTAAA 2 cut(s) 1452, 1461
DriI GACNNNNNGTC 1 cut(s) 1867
Eam1104I CTCTTC 5 cut(s) 504, 688, 718, 785, 992
Eam1105I GACNNNNNGTC 1 cut(s) 1867
EarI CTCTTC 5 cut(s) 504, 688, 718, 785, 992
Eco105I TACGTA 1 cut(s) 2226
Eco130I CCWWGG 1 cut(s) 1741
Eco147I AGGCCT 1 cut(s) 873
Eco24I GRGCYC 1 cut(s) 1152
Eco32I GATATC 1 cut(s) 161
Eco47I GGWCC 5 cut(s) 384, 514, 1607, 1777, 1807
Eco57I CTGAAG 5 cut(s) 766, 1061, 1143, 1505, 2124
Eco88I CYCGRG 1 cut(s) 846
EcoNI CCTNNNNNAGG 1 cut(s) 1984
EcoO109I RGGNCCY 4 cut(s) 384, 514, 1777, 1807
EcoRI GAATTC 1 cut(s) 488
EcoRII CCWGG 1 cut(s) 41
EcoRV GATATC 1 cut(s) 161
EcoT14I CCWWGG 1 cut(s) 1741
EcoT22I ATGCAT 1 cut(s) 1251
EcoT38I GRGCYC 1 cut(s) 1152
ErhI CCWWGG 1 cut(s) 1741
Esp3I CGTCTC 1 cut(s) 1761
FalI AAGNNNNNCTT 4 cut(s) 989, 1021, 1034, 1066
FaqI GGGAC 3 cut(s) 500, 644, 1391
FauI CCCGC 1 cut(s) 1823
FbaI TGATCA 2 cut(s) 480, 1086
FblI GTMKAC 1 cut(s) 2202
Fnu4HI GCNGC 4 cut(s) 20, 171, 174, 522
FriOI GRGCYC 1 cut(s) 1152
Fsp4HI GCNGC 4 cut(s) 20, 171, 174, 522
FspBI CTAG 3 cut(s) 374, 986, 2051
GluI GCNGC 4 cut(s) 20, 171, 174, 522
GsaI CCCAGC 2 cut(s) 1238, 1732
GsuI CTGGAG 1 cut(s) 575
HaeIII GGCC 2 cut(s) 873, 2030
HapII CCGG 1 cut(s) 1908
HgaI GACGC 2 cut(s) 80, 1871
HincII GTYRAC 2 cut(s) 1861, 2203
HindII GTYRAC 2 cut(s) 1861, 2203
HindIII AAGCTT 1 cut(s) 1585
HinfI GANTC 9 cut(s) 130, 233, 675, 745, 1496, 1688, 1990, 2056, 2156
HpaII CCGG 1 cut(s) 1908
HphI GGTGA 3 cut(s) 577, 816, 1866
Hpy166II GTNNAC 7 cut(s) 13, 568, 739, 824, 1861, 1943, 2203
Hpy188I TCNGA 9 cut(s) 156, 199, 210, 249, 1524, 1693, 1958, 1971, 2143
Hpy188III TCNNGA 7 cut(s) 143, 268, 346, 653, 848, 1493, 1796
Hpy8I GTNNAC 7 cut(s) 13, 568, 739, 824, 1861, 1943, 2203
Hpy99I CGWCG 2 cut(s) 2204, 2207
HpyCH4III ACNGT 4 cut(s) 331, 439, 1084, 1327
HpyCH4IV ACGT 5 cut(s) 453, 609, 1736, 2072, 2225
HpyCH4V TGCA 8 cut(s) 173, 220, 521, 1169, 1249, 1669, 2067, 2186
HpyF10VI GCNNNNNNNGC 3 cut(s) 134, 530, 890
HpyF3I CTNAG 3 cut(s) 198, 1583, 1955
HpySE526I ACGT 5 cut(s) 453, 609, 1736, 2072, 2225
KpnI GGTACC 2 cut(s) 592, 1928
Ksp22I TGATCA 2 cut(s) 480, 1086
Kzo9I GATC 9 cut(s) 48, 356, 480, 885, 1086, 1116, 1226, 1252, 2179
LguI GCTCTTC 2 cut(s) 785, 992
LmnI GCTCC 2 cut(s) 936, 1515
Lsp1109I GCAGC 4 cut(s) 31, 157, 185, 533
LweI GCATC 5 cut(s) 716, 757, 1011, 1236, 2181
MaeI CTAG 3 cut(s) 374, 986, 2051
MaeII ACGT 5 cut(s) 453, 609, 1736, 2072, 2225
MaeIII GTNAC 5 cut(s) 108, 291, 803, 921, 1199
MalI GATC 9 cut(s) 50, 358, 482, 887, 1088, 1118, 1228, 1254, 2181
MboI GATC 9 cut(s) 48, 356, 480, 885, 1086, 1116, 1226, 1252, 2179
MflI RGATCY 2 cut(s) 48, 1226
MhlI GDGCHC 5 cut(s) 780, 941, 1152, 1345, 2103
MlyI GAGTC 3 cut(s) 242, 684, 2165
Mph1103I ATGCAT 1 cut(s) 1251
MroXI GAANNNNTTC 3 cut(s) 794, 1296, 1851
MseI TTAA 7 cut(s) 956, 1020, 1446, 1451, 1460, 1790, 2003
MspA1I CMGCKG 2 cut(s) 176, 754
MspI CCGG 1 cut(s) 1908
MspR9I CCNGG 1 cut(s) 43
Mva1269I GAATGC 3 cut(s) 425, 535, 794
MvaI CCWGG 1 cut(s) 43
MvnI CGCG 2 cut(s) 9, 122
MwoI GCNNNNNNNGC 3 cut(s) 134, 530, 890
NdeII GATC 9 cut(s) 48, 356, 480, 885, 1086, 1116, 1226, 1252, 2179
NlaIV GGNNCC 7 cut(s) 50, 516, 590, 1228, 1608, 1926, 2029
NmuCI GTSAC 1 cut(s) 921
NsiI ATGCAT 1 cut(s) 1251
NspI RCATGY 4 cut(s) 292, 1142, 1207, 1242
NspV TTCGAA 2 cut(s) 417, 914
PceI AGGCCT 1 cut(s) 873
PciI ACATGT 2 cut(s) 288, 1138
PciSI GCTCTTC 2 cut(s) 785, 992
PctI GAATGC 3 cut(s) 425, 535, 794
PdmI GAANNNNTTC 3 cut(s) 794, 1296, 1851
PfeI GAWTC 6 cut(s) 130, 745, 1496, 1688, 1990, 2056
PkrI GCNGC 4 cut(s) 21, 172, 175, 523
Ple19I CGATCG 1 cut(s) 888
PleI GAGTC 3 cut(s) 241, 683, 2164
PpsI GAGTC 3 cut(s) 241, 683, 2164
Ppu21I YACGTR 2 cut(s) 454, 2226
PpuMI RGGWCCY 4 cut(s) 384, 514, 1777, 1807
PscI ACATGT 2 cut(s) 288, 1138
PsiI TTATAA 1 cut(s) 543
Psp5II RGGWCCY 4 cut(s) 384, 514, 1777, 1807
Psp6I CCWGG 1 cut(s) 41
PspFI CCCAGC 2 cut(s) 1234, 1728
PspGI CCWGG 1 cut(s) 41
PspN4I GGNNCC 7 cut(s) 50, 516, 590, 1228, 1608, 1926, 2029
PspPI GGNCC 6 cut(s) 384, 514, 1607, 1777, 1807, 2028
PspPPI RGGWCCY 4 cut(s) 384, 514, 1777, 1807
PsrI GAACNNNNNNTAC 2 cut(s) 1465, 1497
PstI CTGCAG 2 cut(s) 175, 523
PsuI RGATCY 2 cut(s) 48, 1226
PvuI CGATCG 1 cut(s) 888
PvuII CAGCTG 1 cut(s) 176
RsaI GTAC 5 cut(s) 14, 193, 590, 1308, 1926
RsaNI GTAC 5 cut(s) 13, 192, 589, 1307, 1925
SalI GTCGAC 1 cut(s) 2201
SapI GCTCTTC 2 cut(s) 785, 992
SaqAI TTAA 7 cut(s) 956, 1020, 1446, 1451, 1460, 1790, 2003
SatI GCNGC 4 cut(s) 20, 171, 174, 522
Sau3AI GATC 9 cut(s) 48, 356, 480, 885, 1086, 1116, 1226, 1252, 2179
Sau96I GGNCC 6 cut(s) 384, 514, 1607, 1777, 1807, 2028
ScaI AGTACT 1 cut(s) 193
SchI GAGTC 3 cut(s) 242, 684, 2165
ScrFI CCNGG 1 cut(s) 43
SduI GDGCHC 5 cut(s) 780, 941, 1152, 1345, 2103
SfaNI GCATC 5 cut(s) 716, 757, 1011, 1236, 2181
SfcI CTRYAG 6 cut(s) 171, 177, 519, 1208, 1278, 2016
SfuI TTCGAA 2 cut(s) 417, 914
SgrDI CGTCGACG 1 cut(s) 2201
SinI GGWCC 5 cut(s) 384, 514, 1607, 1777, 1807
SmiI ATTTAAAT 1 cut(s) 1461
SmlI CTYRAG 2 cut(s) 799, 895
SmoI CTYRAG 2 cut(s) 799, 895
SnaBI TACGTA 1 cut(s) 2226
SseBI AGGCCT 1 cut(s) 873
SsiI CCGC 6 cut(s) 122, 230, 752, 1513, 1816, 1877
SspI AATATT 1 cut(s) 1457
SspMI CTAG 3 cut(s) 374, 986, 2051
StuI AGGCCT 1 cut(s) 873
StyD4I CCNGG 1 cut(s) 41
StyI CCWWGG 1 cut(s) 1741
SwaI ATTTAAAT 1 cut(s) 1461
TaaI ACNGT 4 cut(s) 331, 439, 1084, 1327
TaiI ACGT 5 cut(s) 456, 612, 1739, 2075, 2228
TatI WGTACW 2 cut(s) 191, 1306
TfiI GAWTC 6 cut(s) 130, 745, 1496, 1688, 1990, 2056
Tru1I TTAA 7 cut(s) 956, 1020, 1446, 1451, 1460, 1790, 2003
Tru9I TTAA 7 cut(s) 956, 1020, 1446, 1451, 1460, 1790, 2003
TscAI CASTG 2 cut(s) 1089, 1394
TseFI GTSAC 1 cut(s) 921
TseI GCWGC 4 cut(s) 19, 170, 173, 521
Tsp45I GTSAC 1 cut(s) 921
TspDTI ATGAA 9 cut(s) 273, 327, 542, 636, 803, 1010, 1673, 1817, 2048
TspGWI ACGGA 2 cut(s) 328, 1337
TspRI CASTG 2 cut(s) 1089, 1394
VpaK11BI GGWCC 5 cut(s) 384, 514, 1607, 1777, 1807
XagI CCTNNNNNAGG 1 cut(s) 1984
XapI RAATTY 6 cut(s) 488, 1462, 1847, 1896, 1960, 2038
XceI RCATGY 4 cut(s) 292, 1142, 1207, 1242
XcmI CCANNNNNNNNNTGG 1 cut(s) 78
XmiI GTMKAC 1 cut(s) 2202
XmnI GAANNNNTTC 3 cut(s) 794, 1296, 1851
XspI CTAG 3 cut(s) 374, 986, 2051
ZrmI AGTACT 1 cut(s) 193
Zsp2I ATGCAT 1 cut(s) 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.