pycom06g14020

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
18900489 .. 18906015
5527 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g14020.5

Sequence Viewer

Length: 3705 bp
ATGTCTTGCATTCTTTTGGCTTGTGGTTTCGTTTTGAAAACTAAGCACATAGTTTGTACAATACAAAAATTTATCCATTGCATTCTTTTTTTCTTTTTCTATTGTTTTGAAACTTGTCTATTCTGCAGACAGATTGCATACCAAGTATCGAAGGCCAATATGGAGTCAGCTGCATCACTATTGATTGGGAAAATTGCGGCCATTCTTGAGAACAAAGCATCTTCCATAGCGGCAGTCCATGCTGAAGTTGATGAGCTTAAGCTGGAGCTCATAAGCATGAAATCTTTCTTAATAGATGCTGAAGGCAAGGAAGCACAAACAGAAGGAGAGAAAACGTGGGTTACAAGCGTCAGAGATTTGACCTGCGATGCGGAAAATGTCATTGATAAGTTCCTGTATCACATATATGACAAACAAAGTGCGACTCCATTTGCAAAATTGCTCCACAGAACCATTTACTTTCCAAAGAATCTTTGGTATAGGCATCGAATAGCCAAAAAATTACAGAAAATCACAAAAAATATCAAAGCCATTCCAGAGAGGAATGAGAGATATGGTGTCTCTACAATAGAAGGAACAAGTTCGGATGGTGTTCCCAGATGGGTGAAGAACAAAGCCGAGTCGTCTCTTTATATTATGGAAGACGAACTAATCGGGATTGAAGACAAGAAGCAAAGGTTAATGGGATTGTTGATGAATGGTGGGGAAAATGAAATGGTTGTTTCTGTGGTCGGGATGGGAGGATCAGGCAAGACAACTCTTGTTGCCAATACCTTCAACAACGAAAATGTAAAGCGGCATTTTGACTGTTATGCATGGATCACTGTTTCTCAAACCTATGTGATCGAAGACTTGTTCAAAAATCTGATCAAGCAATTCCACCGAGGAAGAAAAGAAGAGGTGACTGAACATTTGGATTCCATGAGTTACAAAGAATTGTTAGAGATGTTGTCGACATACTTGAAGTCTAAAAGGTACCTCGTTGTATTGGATGATGTGTGGGATATTAAACTTTGGCAAGAAATAAGGATACCACTTCTTAATAGACACCATGGAAGTCGAATCATGCTTACAACTCGAAAGAAAGACATAGCCTTCTATTCTTTTGAAGTTGAAAGATGTCCTTTTGAAATTGAACCTTTGGAAAACAATGAAGCTTGGGAGCTCTTTAGCAAGAAAGCATTCTCAAGTTACAATAATAAATCTTGTCCACCAGAGCTTGAATCATTAGCATGGAAACTTGTGGAAAAGTGTAAAGGCCTACCTCTGGCAGTGGTAACTTTAAGTGCTCTAATGTCTTCCAAGAGGTCATCTTCGGAATGGAAAACTGTATACAAAAGCTTAAATTGGCAATTGACTAACAATTCTATGCTAGAATCAATGAGCAGCATCTTATTGCTTAGTTTCAACAATTTGCCCAACCGGTTGAAGCCTTGTTTCCTATATTGCGCCCTTTTCCCAGAAGATTATCTTATCAAAAGAAAAAGGTTGATCAGGTTATGGATAGCTGAAGGGTTTGTTGAACCAATTGATGGGGTCACACCAGAAGAAGTTGCAGAGGGCTATCTTGTGGAACTTATTGTTCGTAGCATGCTACAAGTTGAAATGAATGAAGCTGGAGGACTAGGAGCATGTAAAATGCATGATCTTGTGCGTGAGCTTGCTTTGTCGACATCAAAAAAGGAAAAGTTTGGTGCTGCATATGTTGGCAGAGAAATAGTAGATAAAGCTGATTTCCGCCGATTGTCAATTCAAACAACTAAAAGAGAAATTAATTCTTGCACAGGTATGTCAGAGCTTCACTCCCTTCTTGTCTTTGGCACGTTAAAGAAATTGCCTTCTGGATTCAAGTTGTTGAGAGTTCTAGATATGCAGGATGCTCCAATTGATAGATTTCCAGGTGAACTAGTGCACTTGTTCAACTTAAGATATTTAAATTTGAAGAGAACCTTAATTGACGAGCTTCCAGAATCCATCGGACGGCTTCGCAACCTTCAAACCTTGAACATCTGTCAGAGTAAGATAAGGGCACTTCCAAAAGCAATCTCCAAGTTAGTAAACCTATGCCATCTAATCATGTATTGTTACACTGGTGATTTTTCGGGCTTTAGATATTTCAATGGGACAAAAACAGTATCGGATCTAAGTAAATTACAGAAACTGCAAGTTTTGCATTCTGTTGAATCAGAAGGAAAGATTATTAAAGTCATCAGGAATATGACCCAACTTACAAGCCTCGGTATTACAAATGTGAAAGCAAGTGACGAGATGGACCTCTGTGACTCCCTTCAAAAGTTAGAGCTCCTTCACACTTTGCTTTTAAAGGCAAGTGATGAAGAGGAGTTTCTTCGAGTTAATGCGCTACGTTCACCTCCTCCAGACCTTCAAAACGTTTTATTGGCCGGAAAACTAGAAAGGGTGCCTCTTTGGTTAGGTTCACTCCAAAACCTTACACGTTTGCATCTACATTGGTCTAGACTTGAAGAAGATGTGCTACCTCACATTCAAGCATTGCCGAATCTTGAAAGGCTTGGGCTATTTAATGCATATGTTGGCGAAAAATTGTGTTTCTCCAGAGGCTTCATAAAGCTTAAGCATTTATGCTTGGTCAACTTCCCCTTACTGAATGGTATAGTTATAGAGAAAGAGGTCAAGCCAAATCTCCGGGGCTTAGACATTGCGTGCTGCCTGGAGTTAAAGGCATTGCCGCAGGGCATTGAGTTCCTTGCTAACGTAGAACGGTTGAATCTGAGTATTGTTCCAATGCAACTGATAGAGTCCGTAAGAGGAGGCATGGATCATCCAAAGGTACAACATATTCCTGAAATCCAGTGTGGTATGAGAGAGAAAATAGGCGGTGTCATGAAAACTTTTTTGGTATACAGAAGAATCAAGCCTCAGAAGCACTTGAGGGCACCGGAGAGGGTAGACAATCATTGTCCCTCTTGTACTCCCCTCCCTCTTCCCTCCCATGGCGACTGCAGTGCTGCCAGTATCCGAGCCCGCCAGAAAGCAGCCCCAACCTGGTCGGGGCGGATTCGAGGCCCATGGGCTATCCGAAGAAAAGGCCCGGTCCGAGCCTTCGCCGAAATCTTCAGCTCCATGGTCAACCTCACCCGGAAGGGCCAAAACTTTGACCTAAACGCCCTCAAGACCACCGTGTGCCGCAAGTACGGCCTCTCACGTGCGCCGAAGCTGGTCGAAATGATTGCGGCTCTGCCGGAGTCGGACCGTGAGGCTCTTCTCCCCAAGCTCCGGGCCAAGCCGGTCCAAACCGCCTCGGGCATTGCCGTCGTGGCCGTGATGTCGAAGCCTCATCGGTGCCCCCACATCGCGCCAGCGGAAATATTTGCGTGTACTGCCCCGGCGGTCCCGATTCGGACTTCGAGTGCAGCACTCAGTCTTACACTGAATACCAGCCTACTAGCATGCGCGCAATTCGGGCAAGACAACCCATATGTCCAGGCTAGAAGCAGGATCGATCAGCTGAAGAGATTGGGTCACAATGTAGACAAGGTCGAGTTCATCTTAATGGGGGGTCCTTTCGTGTCGTTGCCCGCGGATTGCCGTGATTACTTTATTAGAAATGTGCACGATGCGTTATCAGGACACACTTCTGCCAATGTTGAAGAGGCAGTTGCCTACTCCGAGCATGGTGCTACTAAATGTATTGGAACTGCGATGGAACATAAGCCAGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1235

Amino Acids

139.6

Weight (kDa)

9.0

Isoelectric Point (pI)

45.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 371
Acc65I GGTACC 1 cut(s) 975
AccB1I GGYRCC 4 cut(s) 975, 2419, 2914, 3321
AccB7I CCANNNNNTGG 1 cut(s) 1532
AccI GTMKAC 6 cut(s) 953, 1332, 1670, 2880, 2928, 3510
AccII CGCG 3 cut(s) 3335, 3434, 3560
AclI AACGTT 1 cut(s) 2391
AclWI GGATC 5 cut(s) 751, 827, 2148, 2805, 3485
AcoI YGGCCR 3 cut(s) 198, 2400, 3297
AcsI RAATTY 2 cut(s) 68, 1936
AcuI CTGAAG 5 cut(s) 264, 321, 1530, 3079, 3509
AcvI CACGTG 1 cut(s) 3185
AdeI CACNNNGTG 1 cut(s) 3162
AfaI GTAC 6 cut(s) 58, 977, 2811, 2950, 3173, 3358
AfiI CCNNNNNNNGG 7 cut(s) 1267, 1532, 1980, 2972, 3024, 3030, 3255
AflII CTTAAG 3 cut(s) 257, 1924, 2591
AflIII ACRYGT 1 cut(s) 2453
AgeI ACCGGT 1 cut(s) 1422
AhlI ACTAGT 1 cut(s) 1906
AjnI CCWGG 4 cut(s) 1897, 2688, 3023, 3462
AjuI GAANNNNNNNTTGG 2 cut(s) 2858, 2890
Alw21I GWGCWC 6 cut(s) 270, 1167, 1291, 1914, 2304, 3594
Alw26I GTCTC 2 cut(s) 565, 630
Alw44I GTGCAC 2 cut(s) 1910, 3590
AlwI GGATC 5 cut(s) 751, 827, 2148, 2805, 3485
AlwNI CAGNNNCTG 1 cut(s) 2161
Ama87I CYCGRG 1 cut(s) 3280
ApaLI GTGCAC 2 cut(s) 1910, 3590
ApeKI GCWGC 7 cut(s) 170, 1386, 1697, 2685, 2987, 3014, 3392
ApoI RAATTY 2 cut(s) 68, 1936
ArsI GACNNNNNNTTYG 2 cut(s) 895, 927
AseI ATTAAT 1 cut(s) 1773
AsiGI ACCGGT 1 cut(s) 1422
Asp700I GAANNNNTTC 3 cut(s) 284, 580, 1181
Asp718I GGTACC 1 cut(s) 975
AspLEI GCGC 6 cut(s) 1451, 2362, 3190, 3337, 3434, 3436
AsuC2I CCSGG 5 cut(s) 2666, 3071, 3118, 3257, 3365
AsuHPI GGTGA 6 cut(s) 616, 913, 1913, 2105, 2361, 3106
AvaI CYCGRG 1 cut(s) 3280
AvaII GGWCC 6 cut(s) 2272, 3073, 3229, 3268, 3370, 3539
BaeGI GKGCMC 5 cut(s) 1914, 2032, 2917, 3326, 3594
BanI GGYRCC 4 cut(s) 975, 2419, 2914, 3321
BanII GRGCYC 4 cut(s) 270, 1167, 2304, 3004
BarI GAAGNNNNNNTAC 2 cut(s) 2478, 2510
BbrPI CACGTG 1 cut(s) 3185
BbsI GAAGAC 4 cut(s) 648, 669, 855, 1290
Bbv12I GWGCWC 6 cut(s) 270, 1167, 1291, 1914, 2304, 3594
BbvI GCAGC 7 cut(s) 157, 1398, 1684, 2672, 2974, 3026, 3404
BccI CCATC 8 cut(s) 581, 594, 730, 1526, 1982, 2076, 2263, 3676
BceAI ACGGC 5 cut(s) 1997, 3190, 3275, 3284, 3552
BcgI CGANNNNNNTGC 8 cut(s) 2966, 3000, 3191, 3225, 3274, 3308, 3638, 3672
BciT130I CCWGG 4 cut(s) 1899, 2690, 3025, 3464
BciVI GTATCC 2 cut(s) 1023, 3005
BclI TGATCA 2 cut(s) 867, 1491
BcnI CCSGG 5 cut(s) 2666, 3071, 3118, 3257, 3365
BcoDI GTCTC 2 cut(s) 565, 630
BcuI ACTAGT 1 cut(s) 1906
BfaI CTAG 8 cut(s) 1373, 1625, 1865, 1907, 2411, 2475, 3425, 3468
BfmI CTRYAG 2 cut(s) 124, 2980
BfrI CTTAAG 3 cut(s) 257, 1924, 2591
BfuAI ACCTGC 1 cut(s) 371
BfuI GTATCC 2 cut(s) 1023, 3005
BglI GCCNNNNNGGC 1 cut(s) 3296
Bme1390I CCNGG 9 cut(s) 1899, 2666, 2690, 3025, 3071, 3118, 3257, 3365, 3464
Bme18I GGWCC 6 cut(s) 2272, 3073, 3229, 3268, 3370, 3539
BmeT110I CYCGRG 1 cut(s) 3280
BmiI GGNNCC 6 cut(s) 977, 2421, 2916, 3323, 3372, 3540
BmrFI CCNGG 9 cut(s) 1899, 2666, 2690, 3025, 3071, 3118, 3257, 3365, 3464
BmsI GCATC 9 cut(s) 182, 227, 286, 358, 493, 1398, 1867, 2470, 3586
BpiI GAAGAC 4 cut(s) 648, 669, 855, 1290
BplI GAGNNNNNCTC 2 cut(s) 1787, 1819
BpmI CTGGAG 5 cut(s) 284, 1638, 2361, 2557, 2711
BpuEI CTTGAG 4 cut(s) 227, 1171, 2929, 3134
BpuMI CCSGG 5 cut(s) 2666, 3071, 3118, 3257, 3365
Bsa29I ATCGAT 1 cut(s) 3480
BsaAI YACGTR 1 cut(s) 3185
BsaWI WCCGGW 2 cut(s) 1422, 2917
Bsc4I CCNNNNNNNGG 7 cut(s) 1267, 1532, 1980, 2972, 3024, 3030, 3255
Bse118I RCCGGY 2 cut(s) 1422, 3265
Bse1I ACTGG 3 cut(s) 2095, 2830, 2991
Bse3DI GCAATG 5 cut(s) 76, 2510, 2676, 2702, 3285
BseBI CCWGG 4 cut(s) 1899, 2690, 3025, 3464
BseCI ATCGAT 1 cut(s) 3480
BseGI GGATG 5 cut(s) 592, 741, 997, 1882, 2800
BseLI CCNNNNNNNGG 7 cut(s) 1267, 1532, 1980, 2972, 3024, 3030, 3255
BseMI GCAATG 5 cut(s) 76, 2510, 2676, 2702, 3285
BseMII CTCAG 3 cut(s) 2741, 2912, 3412
BseNI ACTGG 3 cut(s) 2095, 2830, 2991
BsePI GCGCGC 1 cut(s) 3432
BseRI GAGGAG 3 cut(s) 2354, 2364, 2802
BseSI GKGCMC 5 cut(s) 1914, 2032, 2917, 3326, 3594
BseXI GCAGC 7 cut(s) 157, 1398, 1684, 2672, 2974, 3026, 3404
BsgI GTGCAG 1 cut(s) 3411
Bsh1236I CGCG 3 cut(s) 3335, 3434, 3560
BshNI GGYRCC 4 cut(s) 975, 2419, 2914, 3321
BshTI ACCGGT 1 cut(s) 1422
BshVI ATCGAT 1 cut(s) 3480
BsiHKAI GWGCWC 6 cut(s) 270, 1167, 1291, 1914, 2304, 3594
BsiHKCI CYCGRG 1 cut(s) 3280
BslFI GGGAC 3 cut(s) 2137, 2925, 3356
BslI CCNNNNNNNGG 7 cut(s) 1267, 1532, 1980, 2972, 3024, 3030, 3255
BsmAI GTCTC 2 cut(s) 565, 630
BsmBI CGTCTC 1 cut(s) 630
BsmFI GGGAC 3 cut(s) 2137, 2925, 3356
BsmI GAATGC 4 cut(s) 9, 81, 1181, 2173
BsoBI CYCGRG 1 cut(s) 3280
Bsp1407I TGTACA 1 cut(s) 56
Bsp19I CCATGG 4 cut(s) 1051, 2971, 3047, 3102
BspCNI CTCAG 3 cut(s) 2742, 2911, 3411
BspDI ATCGAT 1 cut(s) 3480
BspFNI CGCG 3 cut(s) 3335, 3434, 3560
BspHI TCATGA 1 cut(s) 2862
BspLI GGNNCC 6 cut(s) 977, 2421, 2916, 3323, 3372, 3540
BspMAI CTGCAG 2 cut(s) 128, 2984
BspMI ACCTGC 1 cut(s) 371
BspPI GGATC 5 cut(s) 751, 827, 2148, 2805, 3485
BspQI GCTCTTC 1 cut(s) 3246
BspT107I GGYRCC 4 cut(s) 975, 2419, 2914, 3321
BspTI CTTAAG 3 cut(s) 257, 1924, 2591
BsrDI GCAATG 5 cut(s) 76, 2510, 2676, 2702, 3285
BsrFI RCCGGY 2 cut(s) 1422, 3265
BsrGI TGTACA 1 cut(s) 56
BsrI ACTGG 3 cut(s) 2095, 2830, 2991
BssAI RCCGGY 2 cut(s) 1422, 3265
BssHII GCGCGC 1 cut(s) 3432
BssNAI GTATAC 2 cut(s) 1333, 2881
BssT1I CCWWGG 4 cut(s) 1051, 2971, 3047, 3102
Bst1107I GTATAC 2 cut(s) 1333, 2881
Bst2UI CCWGG 4 cut(s) 1899, 2690, 3025, 3464
Bst4CI ACNGT 7 cut(s) 809, 826, 1330, 2134, 2742, 3160, 3233
Bst6I CTCTTC 7 cut(s) 891, 1937, 2331, 2967, 3246, 3485, 3624
BstAFI CTTAAG 3 cut(s) 257, 1924, 2591
BstAPI GCANNNNNTGC 2 cut(s) 239, 2170
BstAUI TGTACA 1 cut(s) 56
BstBAI YACGTR 1 cut(s) 3185
BstC8I GCNNGC 8 cut(s) 1592, 1662, 2683, 3004, 3339, 3430, 3434, 3558
BstDEI CTNAG 7 cut(s) 42, 1400, 2144, 2671, 2750, 2898, 3398
BstDSI CCRYGG 5 cut(s) 1051, 2971, 3047, 3102, 3558
BstF5I GGATG 5 cut(s) 592, 741, 997, 1882, 2800
BstFNI CGCG 3 cut(s) 3335, 3434, 3560
BstHHI GCGC 6 cut(s) 1451, 2362, 3190, 3337, 3434, 3436
BstMAI GTCTC 2 cut(s) 565, 630
BstMWI GCNNNNNNNGC 7 cut(s) 239, 2170, 2902, 3174, 3296, 3359, 3442
BstNI CCWGG 4 cut(s) 1899, 2690, 3025, 3464
BstNSI RCATGY 3 cut(s) 1594, 1635, 3432
BstSCI CCNGG 9 cut(s) 1897, 2664, 2688, 3023, 3069, 3116, 3255, 3363, 3462
BstSFI CTRYAG 2 cut(s) 124, 2980
BstSLI GKGCMC 5 cut(s) 1914, 2032, 2917, 3326, 3594
BstUI CGCG 3 cut(s) 3335, 3434, 3560
BstV1I GCAGC 7 cut(s) 157, 1398, 1684, 2672, 2974, 3026, 3404
BstV2I GAAGAC 4 cut(s) 648, 669, 855, 1290
BstX2I RGATCY 1 cut(s) 2140
BstYI RGATCY 1 cut(s) 2140
BstZ17I GTATAC 2 cut(s) 1333, 2881
Bsu15I ATCGAT 1 cut(s) 3480
BsuI GTATCC 2 cut(s) 1023, 3005
BsuTUI ATCGAT 1 cut(s) 3480
BtgI CCRYGG 5 cut(s) 1051, 2971, 3047, 3102, 3558
BtgZI GCGATG 3 cut(s) 381, 3316, 3695
BtsCI GGATG 5 cut(s) 592, 741, 997, 1882, 2800
BtsI GCAGTG 2 cut(s) 1278, 2989
BtsIMutI CAGTG 6 cut(s) 822, 1278, 2088, 2837, 2989, 3407
BveI ACCTGC 1 cut(s) 371
Cac8I GCNNGC 8 cut(s) 1592, 1662, 2683, 3004, 3339, 3430, 3434, 3558
CaiI CAGNNNCTG 1 cut(s) 2161
CciI TCATGA 1 cut(s) 2862
CfoI GCGC 6 cut(s) 1451, 2362, 3190, 3337, 3434, 3436
Cfr10I RCCGGY 2 cut(s) 1422, 3265
Cfr42I CCGCGG 1 cut(s) 3561
ClaI ATCGAT 1 cut(s) 3480
CpoI CGGWCCG 2 cut(s) 3073, 3229
CseI GACGC 1 cut(s) 337
CsiI ACCWGGT 1 cut(s) 3023
Csp6I GTAC 6 cut(s) 57, 976, 2810, 2949, 3172, 3357
CspAI ACCGGT 1 cut(s) 1422
CspI CGGWCCG 2 cut(s) 3073, 3229
CviQI GTAC 6 cut(s) 57, 976, 2810, 2949, 3172, 3357
DdeI CTNAG 7 cut(s) 42, 1400, 2144, 2671, 2750, 2898, 3398
DraI TTTAAA 2 cut(s) 1935, 2322
DraIII CACNNNGTG 1 cut(s) 3162
EaeI YGGCCR 3 cut(s) 198, 2400, 3297
Eam1104I CTCTTC 7 cut(s) 891, 1937, 2331, 2967, 3246, 3485, 3624
EarI CTCTTC 7 cut(s) 891, 1937, 2331, 2967, 3246, 3485, 3624
EciI GGCGGA 2 cut(s) 1727, 3049
Ecl136II GAGCTC 3 cut(s) 268, 1165, 2302
Eco130I CCWWGG 4 cut(s) 1051, 2971, 3047, 3102
Eco147I AGGCCT 1 cut(s) 1260
Eco24I GRGCYC 4 cut(s) 270, 1167, 2304, 3004
Eco47I GGWCC 6 cut(s) 2272, 3073, 3229, 3268, 3370, 3539
Eco53kI GAGCTC 3 cut(s) 268, 1165, 2302
Eco57I CTGAAG 5 cut(s) 264, 321, 1530, 3079, 3509
Eco72I CACGTG 1 cut(s) 3185
Eco88I CYCGRG 1 cut(s) 3280
EcoICRI GAGCTC 3 cut(s) 268, 1165, 2302
EcoO109I RGGNCCY 1 cut(s) 3539
EcoRII CCWGG 4 cut(s) 1897, 2688, 3023, 3462
EcoT14I CCWWGG 4 cut(s) 1051, 2971, 3047, 3102
EcoT22I ATGCAT 3 cut(s) 817, 1644, 2548
EcoT38I GRGCYC 4 cut(s) 270, 1167, 2304, 3004
ErhI CCWWGG 4 cut(s) 1051, 2971, 3047, 3102
Esp3I CGTCTC 1 cut(s) 630
FalI AAGNNNNNCTT 6 cut(s) 1108, 1140, 1455, 1487, 1934, 1966
FaqI GGGAC 3 cut(s) 2137, 2925, 3356
FauI CCCGC 2 cut(s) 3011, 3565
FauNDI CATATG 3 cut(s) 1702, 2548, 3457
FbaI TGATCA 2 cut(s) 867, 1491
FblI GTMKAC 6 cut(s) 953, 1332, 1670, 2880, 2928, 3510
FokI GGATG 5 cut(s) 599, 748, 1004, 1889, 2787
FriOI GRGCYC 4 cut(s) 270, 1167, 2304, 3004
FspBI CTAG 8 cut(s) 1373, 1625, 1865, 1907, 2411, 2475, 3425, 3468
GlaI GCGC 6 cut(s) 1450, 2361, 3189, 3336, 3433, 3435
GsuI CTGGAG 5 cut(s) 284, 1638, 2361, 2557, 2711
HgaI GACGC 1 cut(s) 337
HhaI GCGC 6 cut(s) 1451, 2362, 3190, 3337, 3434, 3436
Hin6I GCGC 6 cut(s) 1449, 2360, 3188, 3335, 3432, 3434
HinP1I GCGC 6 cut(s) 1449, 2360, 3188, 3335, 3432, 3434
HincII GTYRAC 4 cut(s) 954, 1671, 2611, 3109
HindII GTYRAC 4 cut(s) 954, 1671, 2611, 3109
HindIII AAGCTT 3 cut(s) 1155, 1339, 2588
HphI GGTGA 6 cut(s) 616, 913, 1913, 2105, 2361, 3106
Hpy99I CGWCG 1 cut(s) 3296
HpyCH4III ACNGT 7 cut(s) 809, 826, 1330, 2134, 2742, 3160, 3233
HpyCH4IV ACGT 7 cut(s) 335, 1823, 2365, 2391, 2455, 2733, 3184
HpyF10VI GCNNNNNNNGC 7 cut(s) 239, 2170, 2902, 3174, 3296, 3359, 3442
HpyF3I CTNAG 7 cut(s) 42, 1400, 2144, 2671, 2750, 2898, 3398
HpySE526I ACGT 7 cut(s) 335, 1823, 2365, 2391, 2455, 2733, 3184
HspAI GCGC 6 cut(s) 1449, 2360, 3188, 3335, 3432, 3434
KpnI GGTACC 1 cut(s) 979
Ksp22I TGATCA 2 cut(s) 867, 1491
KspI CCGCGG 1 cut(s) 3561
LguI GCTCTTC 1 cut(s) 3246
LmnI GCTCC 8 cut(s) 265, 447, 1162, 1628, 1885, 2307, 3104, 3258
Lsp1109I GCAGC 7 cut(s) 157, 1398, 1684, 2672, 2974, 3026, 3404
LweI GCATC 9 cut(s) 182, 227, 286, 358, 493, 1398, 1867, 2470, 3586
MabI ACCWGGT 1 cut(s) 3023
MaeI CTAG 8 cut(s) 1373, 1625, 1865, 1907, 2411, 2475, 3425, 3468
MaeII ACGT 7 cut(s) 335, 1823, 2365, 2391, 2455, 2733, 3184
MfeI CAATTG 3 cut(s) 1352, 1527, 1884
MflI RGATCY 1 cut(s) 2140
MlyI GAGTC 6 cut(s) 173, 418, 629, 2276, 2786, 3233
MmeI TCCRAC 1 cut(s) 3207
Mph1103I ATGCAT 3 cut(s) 817, 1644, 2548
MroXI GAANNNNTTC 3 cut(s) 284, 580, 1181
MslI CAYNNNNRTG 5 cut(s) 275, 405, 1231, 1787, 3530
MspA1I CMGCKG 4 cut(s) 170, 3341, 3487, 3560
MspCI CTTAAG 3 cut(s) 257, 1924, 2591
MspR9I CCNGG 9 cut(s) 1899, 2666, 2690, 3025, 3071, 3118, 3257, 3365, 3464
MunI CAATTG 3 cut(s) 1352, 1527, 1884
Mva1269I GAATGC 4 cut(s) 9, 81, 1181, 2173
MvaI CCWGG 4 cut(s) 1899, 2690, 3025, 3464
MvnI CGCG 3 cut(s) 3335, 3434, 3560
MwoI GCNNNNNNNGC 7 cut(s) 239, 2170, 2902, 3174, 3296, 3359, 3442
NciI CCSGG 5 cut(s) 2666, 3071, 3118, 3257, 3365
NcoI CCATGG 4 cut(s) 1051, 2971, 3047, 3102
NdeI CATATG 3 cut(s) 1702, 2548, 3457
NlaIV GGNNCC 6 cut(s) 977, 2421, 2916, 3323, 3372, 3540
NmeAIII GCCGAG 1 cut(s) 643
NmuCI GTSAC 5 cut(s) 901, 1537, 2261, 2279, 3500
NsiI ATGCAT 3 cut(s) 817, 1644, 2548
NspI RCATGY 3 cut(s) 1594, 1635, 3432
PaeI GCATGC 2 cut(s) 1594, 3432
PagI TCATGA 1 cut(s) 2862
PauI GCGCGC 1 cut(s) 3432
PceI AGGCCT 1 cut(s) 1260
PciSI GCTCTTC 1 cut(s) 3246
PctI GAATGC 4 cut(s) 9, 81, 1181, 2173
PdmI GAANNNNTTC 3 cut(s) 284, 580, 1181
PflFI GACNNNGTC 1 cut(s) 3515
PflMI CCANNNNNTGG 1 cut(s) 1532
PinAI ACCGGT 1 cut(s) 1422
PleI GAGTC 6 cut(s) 172, 418, 628, 2276, 2785, 3232
PmaCI CACGTG 1 cut(s) 3185
PmlI CACGTG 1 cut(s) 3185
PpsI GAGTC 6 cut(s) 172, 418, 628, 2276, 2785, 3232
Ppu21I YACGTR 1 cut(s) 3185
PpuMI RGGWCCY 1 cut(s) 3539
PshBI ATTAAT 1 cut(s) 1773
Psp124BI GAGCTC 3 cut(s) 270, 1167, 2304
Psp1406I AACGTT 1 cut(s) 2391
Psp5II RGGWCCY 1 cut(s) 3539
Psp6I CCWGG 4 cut(s) 1897, 2688, 3023, 3462
PspCI CACGTG 1 cut(s) 3185
PspGI CCWGG 4 cut(s) 1897, 2688, 3023, 3462
PspN4I GGNNCC 6 cut(s) 977, 2421, 2916, 3323, 3372, 3540
PspPPI RGGWCCY 1 cut(s) 3539
PstI CTGCAG 2 cut(s) 128, 2984
PstNI CAGNNNCTG 1 cut(s) 2161
PsuI RGATCY 1 cut(s) 2140
PsyI GACNNNGTC 1 cut(s) 3515
PteI GCGCGC 1 cut(s) 3432
PvuII CAGCTG 2 cut(s) 170, 3487
RsaI GTAC 6 cut(s) 58, 977, 2811, 2950, 3173, 3358
RsaNI GTAC 6 cut(s) 57, 976, 2810, 2949, 3172, 3357
RseI CAYNNNNRTG 5 cut(s) 275, 405, 1231, 1787, 3530
Rsr2I CGGWCCG 2 cut(s) 3073, 3229
RsrII CGGWCCG 2 cut(s) 3073, 3229
SacI GAGCTC 3 cut(s) 270, 1167, 2304
SacII CCGCGG 1 cut(s) 3561
SalI GTCGAC 2 cut(s) 952, 1669
SapI GCTCTTC 1 cut(s) 3246
SchI GAGTC 6 cut(s) 173, 418, 629, 2276, 2786, 3233
ScrFI CCNGG 9 cut(s) 1899, 2666, 2690, 3025, 3071, 3118, 3257, 3365, 3464
SexAI ACCWGGT 1 cut(s) 3023
SfaNI GCATC 9 cut(s) 182, 227, 286, 358, 493, 1398, 1867, 2470, 3586
SfcI CTRYAG 2 cut(s) 124, 2980
Sfr303I CCGCGG 1 cut(s) 3561
SgrBI CCGCGG 1 cut(s) 3561
SinI GGWCC 6 cut(s) 2272, 3073, 3229, 3268, 3370, 3539
SmiI ATTTAAAT 1 cut(s) 1935
SmiMI CAYNNNNRTG 5 cut(s) 275, 405, 1231, 1787, 3530
SmlI CTYRAG 7 cut(s) 206, 257, 1186, 1924, 2591, 2908, 3149
SmoI CTYRAG 7 cut(s) 206, 257, 1186, 1924, 2591, 2908, 3149
SpeI ACTAGT 1 cut(s) 1906
SphI GCATGC 2 cut(s) 1594, 3432
SseBI AGGCCT 1 cut(s) 1260
SspI AATATT 1 cut(s) 3348
SspMI CTAG 8 cut(s) 1373, 1625, 1865, 1907, 2411, 2475, 3425, 3468
SstI GAGCTC 3 cut(s) 270, 1167, 2304
StuI AGGCCT 1 cut(s) 1260
StyD4I CCNGG 9 cut(s) 1897, 2664, 2688, 3023, 3069, 3116, 3255, 3363, 3462
StyI CCWWGG 4 cut(s) 1051, 2971, 3047, 3102
SwaI ATTTAAAT 1 cut(s) 1935
TaaI ACNGT 7 cut(s) 809, 826, 1330, 2134, 2742, 3160, 3233
TaiI ACGT 7 cut(s) 338, 1826, 2368, 2394, 2458, 2736, 3187
TatI WGTACW 3 cut(s) 56, 2948, 3356
TauI GCSGC 6 cut(s) 200, 233, 799, 2710, 3168, 3215
TscAI CASTG 6 cut(s) 829, 1278, 2095, 2837, 2989, 3414
TseFI GTSAC 5 cut(s) 901, 1537, 2261, 2279, 3500
TseI GCWGC 7 cut(s) 170, 1386, 1697, 2685, 2987, 3014, 3392
Tsp45I GTSAC 5 cut(s) 901, 1537, 2261, 2279, 3500
TspGWI ACGGA 1 cut(s) 2770
TspRI CASTG 6 cut(s) 829, 1278, 2095, 2837, 2989, 3414
Tth111I GACNNNGTC 1 cut(s) 3515
Van91I CCANNNNNTGG 1 cut(s) 1532
Vha464I CTTAAG 3 cut(s) 257, 1924, 2591
VneI GTGCAC 2 cut(s) 1910, 3590
VpaK11BI GGWCC 6 cut(s) 2272, 3073, 3229, 3268, 3370, 3539
VspI ATTAAT 1 cut(s) 1773
XapI RAATTY 2 cut(s) 68, 1936
XbaI TCTAGA 2 cut(s) 1864, 2474
XceI RCATGY 3 cut(s) 1594, 1635, 3432
XcmI CCANNNNNNNNNTGG 1 cut(s) 471
XmiI GTMKAC 6 cut(s) 953, 1332, 1670, 2880, 2928, 3510
XmnI GAANNNNTTC 3 cut(s) 284, 580, 1181
XspI CTAG 8 cut(s) 1373, 1625, 1865, 1907, 2411, 2475, 3425, 3468
Zsp2I ATGCAT 3 cut(s) 817, 1644, 2548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.