FvH4_3g11471

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000110
Physical Location & Seq
Forward (+)
6753000 .. 6754857
1858 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g11471.t1

Sequence Viewer

Length: 1524 bp
ATGACTTTCTCAAACACATTGATTTCTCGATTCAAATTATTGAGAACTCTAGACAATGAGGATGTCCAAATTCATAAATTGCCTGCTGCAGTTGTTTACTTGTTCAACTTGAGATACTTGAATTTGAAGGGCACGTTAATCAAGGAACTTCCAAAGTCTATCGGACGTCTCCGCAACCTTCAAGTTCTGAACATTACGAATACCATTGTAGAGTCACTTCCACAAGGAATTACAAAGTTGTTAAACCTGCGCCATCTAATTATGTATCGTTACTGTGGCAGTCCTGTGGACTATCTACGTTGGAGGGGGAAAAGAGTGCCATCAAATATTTGTAAGCTGCAGAAATTGCAATGTTTATCATGCATTGAATCAGAAGGGGACACTATTAGACTTATCGGCAACCTGACTCAACTTAGGAGCATTGGCATTACACATGTCAAAGAAAAAGATGACACTGACCTTCAGGCGTCAATTGAGAAGTTGACTCTGCTTCGATCTCTGGATTTGATGGCTAGTAATGAAGAGGAAATTCTTCCGGTGAATGCACAATGTGCACCACTTCCGCACCTTCGAAAGCTTTATTTGTGTGGCAGATTGCAAAACGTAACACCATGGTTTTCTTCACTGCATAGCCTCACAGCTCTGTTTCTGAATTGGTCAAGACTTGAAGATGATATACTACCTGAACTCGAAGCACTGCCCCATCTAACAACGCTTCATCTCTGTAAAGCATATGTTGGGGAAGAGTGGTGTTTCCGTAGGGGTTTTGTCAAGCTTATGAGATTGCAATTGTGCAATCATGCAGCGCTGGAAAAGATATCTATAGAAAAAGGGGCCATGCCCAATCTCCAGTCCTTTTGGGTTGAACACTGCATGGAATTGAAGATAGTGCCACAGGGCCTTGAGTACCTTTCTAATCTACAAACTTTGGTCCTGGCAATAGTTCCAATAGAAATTATGCATCCCATTAGGAGAGGAGGTGCGGATCGCTCCAAGGTACAACACATCCCAGAGATCAGACATGTTTTCCAACAATCATCTACGCAGTGGCTCAGCGAAAATTTCCTAGAAAGACTGCTCTGCAAGCTTCATCTTATAAATGCGTATGCTGGGGAAGAGTTGTGTTTCCGCAGAGGTTTTGTAAAGCTGGTGTCATTTGCAGTCGAGGAATTTTGGCTCGTTGAAAAGACAGCTATAGAGAAAGGGGCAATGCCTAATCTCCAGGACTTATTGGTTGTCAGCTGCATGAATTTGAAGACAGTGCCGCTGGGCCTTGAAAACCTTTCTAATCTACAAACTTTGACCCTGAGAATTGTTCCAACAGAAATTATAAACCCCATTCGGAAAGGAGGTGCGGATCGCAAAAATGTACAACACATCCCGGAGATCAGTCATATTTCATCCCACTGGAACTACGAAAACTTAATCATTTCGAGCCTGAGAAGAGAAGCATATGTTGAAGGAGATTTGACGATGTTTGATGAAGAATCCGTTTCTCTAGGTGTGGGAGGATGCAAGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

508

Amino Acids

57.97

Weight (kDa)

8.31

Isoelectric Point (pI)

58.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 7 - 312 1.9e-40 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1097, 1331
AatII GACGTC 1 cut(s) 169
Acc36I ACCTGC 1 cut(s) 255
AciI CCGC 6 cut(s) 172, 563, 983, 1129, 1265, 1355
AclWI GGATC 2 cut(s) 993, 1365
AcsI RAATTY 6 cut(s) 69, 121, 528, 1060, 1169, 1249
AcuI CTGAAG 1 cut(s) 446
AcyI GRCGYC 2 cut(s) 166, 467
AdeI CACNNNGTG 1 cut(s) 551
AfaI GTAC 3 cut(s) 908, 999, 1371
AfeI AGCGCT 1 cut(s) 807
AflIII ACRYGT 2 cut(s) 433, 1021
AjnI CCWGG 2 cut(s) 933, 1221
AluBI AGCT 8 cut(s) 337, 577, 641, 775, 1087, 1147, 1193, 1242
AluI AGCT 8 cut(s) 337, 577, 641, 775, 1087, 1147, 1193, 1242
Alw21I GWGCWC 1 cut(s) 556
Alw26I GTCTC 1 cut(s) 173
Alw44I GTGCAC 1 cut(s) 552
AlwI GGATC 2 cut(s) 993, 1365
Aor51HI AGCGCT 1 cut(s) 807
AoxI GGCC 3 cut(s) 834, 898, 1270
ApaLI GTGCAC 1 cut(s) 552
ApeKI GCWGC 4 cut(s) 86, 337, 803, 1242
ApoI RAATTY 6 cut(s) 69, 121, 528, 1060, 1169, 1249
Asp700I GAANNNNTTC 1 cut(s) 531
AspLEI GCGC 2 cut(s) 252, 808
AspS9I GGNCC 4 cut(s) 834, 898, 931, 1270
AsuC2I CCSGG 1 cut(s) 1382
AsuHPI GGTGA 1 cut(s) 550
AsuII TTCGAA 1 cut(s) 571
AvaII GGWCC 1 cut(s) 931
BaeGI GKGCMC 2 cut(s) 134, 556
BarI GAAGNNNNNNTAC 4 cut(s) 201, 233, 660, 692
BbsI GAAGAC 1 cut(s) 1262
Bbv12I GWGCWC 1 cut(s) 556
BbvI GCAGC 4 cut(s) 73, 324, 815, 1229
BccI CCATC 4 cut(s) 261, 328, 502, 711
BciT130I CCWGG 2 cut(s) 935, 1223
BcnI CCSGG 1 cut(s) 1382
BcoDI GTCTC 1 cut(s) 173
BfaI CTAG 4 cut(s) 50, 513, 1067, 1499
BfmI CTRYAG 4 cut(s) 87, 338, 822, 1194
BfoI RGCGCY 1 cut(s) 809
BfuAI ACCTGC 1 cut(s) 255
BisI GCNGC 5 cut(s) 87, 338, 804, 1243, 1265
BlpI GCTNAGC 1 cut(s) 1052
BlsI GCNGC 5 cut(s) 88, 339, 805, 1244, 1266
Bme1390I CCNGG 3 cut(s) 935, 1223, 1382
Bme18I GGWCC 1 cut(s) 931
BmgT120I GGNCC 4 cut(s) 834, 898, 931, 1270
BmiI GGNNCC 1 cut(s) 835
BmrFI CCNGG 3 cut(s) 935, 1223, 1382
BmsI GCATC 2 cut(s) 970, 1502
BpiI GAAGAC 1 cut(s) 1262
BpmI CTGGAG 2 cut(s) 833, 1205
Bpu1102I GCTNAGC 1 cut(s) 1052
Bpu14I TTCGAA 1 cut(s) 571
BpuEI CTTGAG 2 cut(s) 130, 923
BpuMI CCSGG 1 cut(s) 1382
BsaHI GRCGYC 2 cut(s) 166, 467
BsaJI CCNNGG 2 cut(s) 611, 993
BsaWI WCCGGW 1 cut(s) 535
BsaXI ACNNNNNCTCC 2 cut(s) 964, 994
Bse1I ACTGG 2 cut(s) 850, 1412
Bse3DI GCAATG 2 cut(s) 356, 1215
BseBI CCWGG 2 cut(s) 935, 1223
BseDI CCNNGG 2 cut(s) 611, 993
BseGI GGATG 6 cut(s) 67, 961, 1005, 1377, 1400, 1517
BseMI GCAATG 2 cut(s) 356, 1215
BseMII CTCAG 3 cut(s) 1066, 1298, 1430
BseNI ACTGG 2 cut(s) 850, 1412
BseRI GAGGAG 1 cut(s) 990
BseSI GKGCMC 2 cut(s) 134, 556
BseXI GCAGC 4 cut(s) 73, 324, 815, 1229
BseYI CCCAGC 2 cut(s) 1109, 1267
BshFI GGCC 3 cut(s) 836, 900, 1272
BsiHKAI GWGCWC 1 cut(s) 556
BsiSI CCGG 2 cut(s) 536, 1382
BslFI GGGAC 1 cut(s) 392
BsmAI GTCTC 1 cut(s) 173
BsmBI CGTCTC 1 cut(s) 173
BsmFI GGGAC 1 cut(s) 392
BsmI GAATGC 1 cut(s) 547
BsnI GGCC 3 cut(s) 836, 900, 1272
Bsp119I TTCGAA 1 cut(s) 571
Bsp1286I GDGCHC 2 cut(s) 134, 556
Bsp1407I TGTACA 1 cut(s) 1369
Bsp143I GATC 5 cut(s) 494, 985, 1014, 1357, 1386
Bsp1720I GCTNAGC 1 cut(s) 1052
Bsp19I CCATGG 1 cut(s) 611
BspACI CCGC 6 cut(s) 172, 563, 983, 1129, 1265, 1355
BspANI GGCC 3 cut(s) 836, 900, 1272
BspCNI CTCAG 3 cut(s) 1065, 1299, 1431
BspLI GGNNCC 1 cut(s) 835
BspMAI CTGCAG 2 cut(s) 91, 342
BspMI ACCTGC 1 cut(s) 255
BspPI GGATC 2 cut(s) 993, 1365
BspT104I TTCGAA 1 cut(s) 571
BsrDI GCAATG 2 cut(s) 356, 1215
BsrGI TGTACA 1 cut(s) 1369
BsrI ACTGG 2 cut(s) 850, 1412
BssECI CCNNGG 2 cut(s) 611, 993
BssMI GATC 5 cut(s) 494, 985, 1014, 1357, 1386
BssNI GRCGYC 2 cut(s) 166, 467
BssT1I CCWWGG 2 cut(s) 611, 993
Bst2UI CCWGG 2 cut(s) 935, 1223
Bst4CI ACNGT 2 cut(s) 275, 1261
Bst6I CTCTTC 4 cut(s) 516, 738, 1110, 1438
BstACI GRCGYC 2 cut(s) 166, 467
BstAPI GCANNNNNTGC 2 cut(s) 346, 551
BstAUI TGTACA 1 cut(s) 1369
BstBI TTCGAA 1 cut(s) 571
BstC8I GCNNGC 2 cut(s) 84, 1085
BstDEI CTNAG 4 cut(s) 413, 1052, 1307, 1439
BstDSI CCRYGG 1 cut(s) 611
BstF5I GGATG 6 cut(s) 67, 961, 1005, 1377, 1400, 1517
BstH2I RGCGCY 1 cut(s) 809
BstHHI GCGC 2 cut(s) 252, 808
BstKTI GATC 5 cut(s) 497, 988, 1017, 1360, 1389
BstMAI GTCTC 1 cut(s) 173
BstMBI GATC 5 cut(s) 494, 985, 1014, 1357, 1386
BstMWI GCNNNNNNNGC 3 cut(s) 346, 551, 1084
BstNI CCWGG 2 cut(s) 935, 1223
BstNSI RCATGY 2 cut(s) 437, 1025
BstSCI CCNGG 3 cut(s) 933, 1221, 1380
BstSFI CTRYAG 4 cut(s) 87, 338, 822, 1194
BstSLI GKGCMC 2 cut(s) 134, 556
BstV1I GCAGC 4 cut(s) 73, 324, 815, 1229
BstV2I GAAGAC 1 cut(s) 1262
BsuRI GGCC 3 cut(s) 836, 900, 1272
BtgI CCRYGG 1 cut(s) 611
BtsCI GGATG 6 cut(s) 67, 961, 1005, 1377, 1400, 1517
BtsI GCAGTG 4 cut(s) 623, 695, 868, 1052
BtsIMutI CAGTG 7 cut(s) 453, 623, 695, 868, 1052, 1266, 1405
BveI ACCTGC 1 cut(s) 255
Cac8I GCNNGC 2 cut(s) 84, 1085
CfoI GCGC 2 cut(s) 252, 808
Cfr13I GGNCC 4 cut(s) 834, 898, 931, 1270
CseI GACGC 1 cut(s) 456
Csp6I GTAC 3 cut(s) 907, 998, 1370
CviAII CATG 8 cut(s) 360, 434, 612, 800, 838, 874, 1022, 1246
CviQI GTAC 3 cut(s) 907, 998, 1370
DdeI CTNAG 4 cut(s) 413, 1052, 1307, 1439
DpnI GATC 5 cut(s) 496, 987, 1016, 1359, 1388
DpnII GATC 5 cut(s) 494, 985, 1014, 1357, 1386
DraIII CACNNNGTG 1 cut(s) 551
Eam1104I CTCTTC 4 cut(s) 516, 738, 1110, 1438
EarI CTCTTC 4 cut(s) 516, 738, 1110, 1438
Eco130I CCWWGG 2 cut(s) 611, 993
Eco32I GATATC 1 cut(s) 819
Eco47I GGWCC 1 cut(s) 931
Eco47III AGCGCT 1 cut(s) 807
Eco57I CTGAAG 1 cut(s) 446
EcoO109I RGGNCCY 1 cut(s) 898
EcoRII CCWGG 2 cut(s) 933, 1221
EcoRV GATATC 1 cut(s) 819
EcoT14I CCWWGG 2 cut(s) 611, 993
EcoT22I ATGCAT 2 cut(s) 365, 963
ErhI CCWWGG 2 cut(s) 611, 993
Esp3I CGTCTC 1 cut(s) 173
FaeI CATG 8 cut(s) 363, 437, 615, 803, 841, 877, 1025, 1249
FaqI GGGAC 1 cut(s) 392
FatI CATG 8 cut(s) 359, 433, 611, 799, 837, 873, 1021, 1245
FauNDI CATATG 2 cut(s) 733, 1453
Fnu4HI GCNGC 5 cut(s) 87, 338, 804, 1243, 1265
FokI GGATG 5 cut(s) 74, 948, 992, 1364, 1387
Fsp4HI GCNGC 5 cut(s) 87, 338, 804, 1243, 1265
FspBI CTAG 4 cut(s) 50, 513, 1067, 1499
GlaI GCGC 2 cut(s) 251, 807
GluI GCNGC 5 cut(s) 87, 338, 804, 1243, 1265
GsaI CCCAGC 2 cut(s) 1113, 1271
GsuI CTGGAG 2 cut(s) 833, 1205
HaeII RGCGCY 1 cut(s) 809
HaeIII GGCC 3 cut(s) 836, 900, 1272
HapII CCGG 2 cut(s) 536, 1382
HgaI GACGC 1 cut(s) 456
HhaI GCGC 2 cut(s) 252, 808
Hin1I GRCGYC 2 cut(s) 166, 467
Hin1II CATG 8 cut(s) 363, 437, 615, 803, 841, 877, 1025, 1249
Hin6I GCGC 2 cut(s) 250, 806
HinP1I GCGC 2 cut(s) 250, 806
HincII GTYRAC 1 cut(s) 483
HindII GTYRAC 1 cut(s) 483
HindIII AAGCTT 3 cut(s) 575, 773, 1085
HinfI GANTC 6 cut(s) 30, 212, 368, 406, 484, 1487
HpaII CCGG 2 cut(s) 536, 1382
HphI GGTGA 1 cut(s) 550
Hpy166II GTNNAC 4 cut(s) 97, 289, 483, 554
Hpy188I TCNGA 6 cut(s) 164, 189, 373, 651, 1019, 1344
Hpy188III TCNNGA 4 cut(s) 27, 50, 500, 660
Hpy8I GTNNAC 4 cut(s) 97, 289, 483, 554
HpyAV CCTTC 6 cut(s) 121, 188, 368, 470, 578, 1454
HpyCH4III ACNGT 2 cut(s) 275, 1261
HpyCH4IV ACGT 4 cut(s) 134, 166, 298, 603
HpyF10VI GCNNNNNNNGC 3 cut(s) 346, 551, 1084
HpyF3I CTNAG 4 cut(s) 413, 1052, 1307, 1439
HpySE526I ACGT 4 cut(s) 134, 166, 298, 603
Hsp92I GRCGYC 2 cut(s) 166, 467
Hsp92II CATG 8 cut(s) 363, 437, 615, 803, 841, 877, 1025, 1249
HspAI GCGC 2 cut(s) 250, 806
Kzo9I GATC 5 cut(s) 494, 985, 1014, 1357, 1386
LmnI GCTCC 2 cut(s) 417, 995
Lsp1109I GCAGC 4 cut(s) 73, 324, 815, 1229
LweI GCATC 2 cut(s) 970, 1502
MaeI CTAG 4 cut(s) 50, 513, 1067, 1499
MaeII ACGT 4 cut(s) 134, 166, 298, 603
MaeIII GTNAC 3 cut(s) 213, 269, 604
MalI GATC 5 cut(s) 496, 987, 1016, 1359, 1388
MboI GATC 5 cut(s) 494, 985, 1014, 1357, 1386
MfeI CAATTG 2 cut(s) 471, 788
MhlI GDGCHC 2 cut(s) 134, 556
MlyI GAGTC 3 cut(s) 221, 400, 478
MmeI TCCRAC 3 cut(s) 281, 1054, 1343
Mph1103I ATGCAT 2 cut(s) 365, 963
MroXI GAANNNNTTC 1 cut(s) 531
MseI TTAA 3 cut(s) 137, 242, 1424
MspA1I CMGCKG 2 cut(s) 1242, 1267
MspI CCGG 2 cut(s) 536, 1382
MspR9I CCNGG 3 cut(s) 935, 1223, 1382
MunI CAATTG 2 cut(s) 471, 788
Mva1269I GAATGC 1 cut(s) 547
MvaI CCWGG 2 cut(s) 935, 1223
MwoI GCNNNNNNNGC 3 cut(s) 346, 551, 1084
NciI CCSGG 1 cut(s) 1382
NcoI CCATGG 1 cut(s) 611
NdeI CATATG 2 cut(s) 733, 1453
NdeII GATC 5 cut(s) 494, 985, 1014, 1357, 1386
NlaIII CATG 8 cut(s) 363, 437, 615, 803, 841, 877, 1025, 1249
NlaIV GGNNCC 1 cut(s) 835
NmuCI GTSAC 1 cut(s) 213
NsiI ATGCAT 2 cut(s) 365, 963
NspI RCATGY 2 cut(s) 437, 1025
NspV TTCGAA 1 cut(s) 571
PciI ACATGT 2 cut(s) 433, 1021
PctI GAATGC 1 cut(s) 547
PdmI GAANNNNTTC 1 cut(s) 531
PfeI GAWTC 3 cut(s) 30, 368, 1487
PfoI TCCNGGA 2 cut(s) 1221, 1380
PkrI GCNGC 5 cut(s) 88, 339, 805, 1244, 1266
PleI GAGTC 3 cut(s) 220, 400, 478
PpsI GAGTC 3 cut(s) 220, 400, 478
PscI ACATGT 2 cut(s) 433, 1021
PsiI TTATAA 2 cut(s) 1097, 1331
Psp6I CCWGG 2 cut(s) 933, 1221
PspFI CCCAGC 2 cut(s) 1109, 1267
PspGI CCWGG 2 cut(s) 933, 1221
PspN4I GGNNCC 1 cut(s) 835
PspPI GGNCC 4 cut(s) 834, 898, 931, 1270
PstI CTGCAG 2 cut(s) 91, 342
PvuII CAGCTG 1 cut(s) 1242
RsaI GTAC 3 cut(s) 908, 999, 1371
RsaNI GTAC 3 cut(s) 907, 998, 1370
SaqAI TTAA 3 cut(s) 137, 242, 1424
SatI GCNGC 5 cut(s) 87, 338, 804, 1243, 1265
Sau3AI GATC 5 cut(s) 494, 985, 1014, 1357, 1386
Sau96I GGNCC 4 cut(s) 834, 898, 931, 1270
SchI GAGTC 3 cut(s) 221, 400, 478
ScrFI CCNGG 3 cut(s) 935, 1223, 1382
SduI GDGCHC 2 cut(s) 134, 556
SfaNI GCATC 2 cut(s) 970, 1502
SfcI CTRYAG 4 cut(s) 87, 338, 822, 1194
SfuI TTCGAA 1 cut(s) 571
SinI GGWCC 1 cut(s) 931
SmlI CTYRAG 2 cut(s) 109, 902
SmoI CTYRAG 2 cut(s) 109, 902
SsiI CCGC 6 cut(s) 172, 563, 983, 1129, 1265, 1355
SspI AATATT 1 cut(s) 328
SspMI CTAG 4 cut(s) 50, 513, 1067, 1499
StyD4I CCNGG 3 cut(s) 933, 1221, 1380
StyI CCWWGG 2 cut(s) 611, 993
TaaI ACNGT 2 cut(s) 275, 1261
TaiI ACGT 4 cut(s) 137, 169, 301, 606
TaqI TCGA 6 cut(s) 28, 493, 571, 690, 1164, 1433
TatI WGTACW 1 cut(s) 1369
TauI GCSGC 1 cut(s) 1267
TfiI GAWTC 3 cut(s) 30, 368, 1487
Tru1I TTAA 3 cut(s) 137, 242, 1424
Tru9I TTAA 3 cut(s) 137, 242, 1424
TscAI CASTG 7 cut(s) 460, 630, 702, 875, 1052, 1266, 1412
TseFI GTSAC 1 cut(s) 213
TseI GCWGC 4 cut(s) 86, 337, 803, 1242
Tsp45I GTSAC 1 cut(s) 213
TspDTI ATGAA 7 cut(s) 62, 534, 707, 1079, 1262, 1389, 1497
TspGWI ACGGA 2 cut(s) 746, 1480
TspRI CASTG 7 cut(s) 460, 630, 702, 875, 1052, 1266, 1412
VneI GTGCAC 1 cut(s) 552
VpaK11BI GGWCC 1 cut(s) 931
XapI RAATTY 6 cut(s) 69, 121, 528, 1060, 1169, 1249
XbaI TCTAGA 1 cut(s) 49
XceI RCATGY 2 cut(s) 437, 1025
XmnI GAANNNNTTC 1 cut(s) 531
XspI CTAG 4 cut(s) 50, 513, 1067, 1499
ZraI GACGTC 1 cut(s) 167
Zsp2I ATGCAT 2 cut(s) 365, 963
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.