MD06G1156300.v1.1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0000110
Physical Location & Seq
Forward (+)
29874776 .. 29875579
804 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1156300.v1.1.491

Sequence Viewer

Length: 804 bp
ATGGCTGGGATAAAAGCAGCATCCGATCTAAGTAAATTACAGAAACTGCAAGTTTTGCAATCTGTTGAATCAGAAGGAAAGATAATTAAAGGCATCAGGAATATGACCCAACTTTCAAGCGTCGGTATTACAAATGTGAAAGCAAGTGACGAGATGGACCTATGTGACTCCCTTCAAAAGTTAGAGCTCCTTCACTATTTGTTTTTGATGGCAAGTGATGAAGAGGAGTTTCTTCGAGTTAATGCACTAAGTTCGCCTCCTCCAGGCCTTCAAAAGGTTTATTTGGCCGGAAAACTAGAAAAGGTACCTCTTTGGTTTGGTTCACTCCATAACCTGACACGTATGTCTCTACGTTGGTCTAGACTTGAAGAAGATGTGCTACCTCACATTCAAGCATTGCCGAATCTTGAAAGGCTTGGGCTAATTAATGCGTATGTTGGCGAAAAATTGTGTTTCTCCGGAGGCTTCATAAAGCTTAAGTGTTTGAATTTGGGCAACCTCCCCTTGTTGAATAGTATAGCTATAGAGAAAGGGGCAATGCCAAATCTCCAGGTCCTAGACATTTGGGAATGCATGGAGTTAAAGACATTGCCGCAGGGCATTGAGTTCCTTGCTAACGTGGAACGCTTGATTCTGGGGCATGTTCCAATGCAACTTATAGAGTCCGTAAAAGGAGGCATGGATCATCCAAAGGTACAACACATTCCTGAAATCAGCCTGTATTACATGGGACACCTTGAAAGATTGTCCGGTATTCACTCTCGTAGAAGGTACGCACACTTTTATCCTTGCATAAAAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

268

Amino Acids

30.05

Weight (kDa)

7.69

Isoelectric Point (pI)

59.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 9 - 198 9.9e-20 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 343
Acc65I GGTACC 1 cut(s) 304
AccB1I GGYRCC 1 cut(s) 304
AccIII TCCGGA 1 cut(s) 458
AciI CCGC 1 cut(s) 593
AclWI GGATC 1 cut(s) 690
AcoI YGGCCR 1 cut(s) 285
AcsI RAATTY 2 cut(s) 487, 798
AfaI GTAC 3 cut(s) 306, 696, 773
AfiI CCNNNNNNNGG 2 cut(s) 263, 274
AflII CTTAAG 1 cut(s) 476
AflIII ACRYGT 1 cut(s) 338
AjnI CCWGG 2 cut(s) 262, 549
AluBI AGCT 3 cut(s) 187, 475, 521
AluI AGCT 3 cut(s) 187, 475, 521
Alw21I GWGCWC 1 cut(s) 189
Alw26I GTCTC 1 cut(s) 351
AlwI GGATC 1 cut(s) 690
AlwNI CAGNNNCTG 1 cut(s) 46
Aor13HI TCCGGA 1 cut(s) 458
AoxI GGCC 2 cut(s) 265, 285
ApeKI GCWGC 1 cut(s) 17
ApoI RAATTY 2 cut(s) 487, 798
AseI ATTAAT 1 cut(s) 426
Asp718I GGTACC 1 cut(s) 304
AspS9I GGNCC 2 cut(s) 157, 553
AvaII GGWCC 2 cut(s) 157, 553
BanI GGYRCC 1 cut(s) 304
BanII GRGCYC 1 cut(s) 189
BarI GAAGNNNNNNTAC 2 cut(s) 363, 395
Bbv12I GWGCWC 1 cut(s) 189
BbvI GCAGC 1 cut(s) 29
BccI CCATC 2 cut(s) 148, 202
BcgI CGANNNNNNTGC 2 cut(s) 234, 268
BciT130I CCWGG 2 cut(s) 264, 551
BcoDI GTCTC 1 cut(s) 351
BfaI CTAG 3 cut(s) 296, 360, 557
BfmI CTRYAG 1 cut(s) 522
BfrI CTTAAG 1 cut(s) 476
BisI GCNGC 2 cut(s) 18, 593
BlsI GCNGC 2 cut(s) 19, 594
Bme1390I CCNGG 2 cut(s) 264, 551
Bme18I GGWCC 2 cut(s) 157, 553
BmgT120I GGNCC 2 cut(s) 157, 553
BmiI GGNNCC 1 cut(s) 306
BmrFI CCNGG 2 cut(s) 264, 551
BmsI GCATC 2 cut(s) 29, 102
BpmI CTGGAG 2 cut(s) 246, 533
BsaAI YACGTR 1 cut(s) 341
BsaWI WCCGGW 2 cut(s) 458, 749
Bsc4I CCNNNNNNNGG 2 cut(s) 263, 274
Bse3DI GCAATG 3 cut(s) 395, 543, 587
BseAI TCCGGA 1 cut(s) 458
BseBI CCWGG 2 cut(s) 264, 551
BseGI GGATG 2 cut(s) 20, 685
BseLI CCNNNNNNNGG 2 cut(s) 263, 274
BseMI GCAATG 3 cut(s) 395, 543, 587
BseRI GAGGAG 2 cut(s) 239, 249
BseXI GCAGC 1 cut(s) 29
BseYI CCCAGC 1 cut(s) 5
BshFI GGCC 2 cut(s) 267, 287
BshNI GGYRCC 1 cut(s) 304
BsiHKAI GWGCWC 1 cut(s) 189
BsiSI CCGG 3 cut(s) 288, 459, 750
BslFI GGGAC 1 cut(s) 744
BslI CCNNNNNNNGG 2 cut(s) 263, 274
BsmAI GTCTC 1 cut(s) 351
BsmFI GGGAC 1 cut(s) 744
BsmI GAATGC 1 cut(s) 575
BsnI GGCC 2 cut(s) 267, 287
Bsp1286I GDGCHC 1 cut(s) 189
Bsp13I TCCGGA 1 cut(s) 458
Bsp143I GATC 2 cut(s) 25, 682
BspACI CCGC 1 cut(s) 593
BspANI GGCC 2 cut(s) 267, 287
BspEI TCCGGA 1 cut(s) 458
BspLI GGNNCC 1 cut(s) 306
BspPI GGATC 1 cut(s) 690
BspT107I GGYRCC 1 cut(s) 304
BspTI CTTAAG 1 cut(s) 476
BsrDI GCAATG 3 cut(s) 395, 543, 587
BssMI GATC 2 cut(s) 25, 682
Bst2UI CCWGG 2 cut(s) 264, 551
Bst6I CTCTTC 1 cut(s) 216
BstAFI CTTAAG 1 cut(s) 476
BstAPI GCANNNNNTGC 1 cut(s) 55
BstBAI YACGTR 1 cut(s) 341
BstDEI CTNAG 2 cut(s) 29, 248
BstENI CCTNNNNNAGG 2 cut(s) 261, 272
BstF5I GGATG 2 cut(s) 20, 685
BstKTI GATC 2 cut(s) 28, 685
BstMAI GTCTC 1 cut(s) 351
BstMBI GATC 2 cut(s) 25, 682
BstMWI GCNNNNNNNGC 1 cut(s) 55
BstNI CCWGG 2 cut(s) 264, 551
BstNSI RCATGY 1 cut(s) 644
BstSCI CCNGG 2 cut(s) 262, 549
BstSFI CTRYAG 1 cut(s) 522
BstV1I GCAGC 1 cut(s) 29
BsuRI GGCC 2 cut(s) 267, 287
BtsCI GGATG 2 cut(s) 20, 685
CaiI CAGNNNCTG 1 cut(s) 46
Cfr13I GGNCC 2 cut(s) 157, 553
CseI GACGC 1 cut(s) 109
Csp6I GTAC 3 cut(s) 305, 695, 772
CviAII CATG 4 cut(s) 574, 641, 679, 727
CviQI GTAC 3 cut(s) 305, 695, 772
DdeI CTNAG 2 cut(s) 29, 248
DpnI GATC 2 cut(s) 27, 684
DpnII GATC 2 cut(s) 25, 682
DrdI GACNNNNNNGTC 1 cut(s) 343
DseDI GACNNNNNNGTC 1 cut(s) 343
EaeI YGGCCR 1 cut(s) 285
Eam1104I CTCTTC 1 cut(s) 216
EarI CTCTTC 1 cut(s) 216
Ecl136II GAGCTC 1 cut(s) 187
Eco147I AGGCCT 1 cut(s) 267
Eco24I GRGCYC 1 cut(s) 189
Eco47I GGWCC 2 cut(s) 157, 553
Eco53kI GAGCTC 1 cut(s) 187
EcoICRI GAGCTC 1 cut(s) 187
EcoNI CCTNNNNNAGG 2 cut(s) 261, 272
EcoO109I RGGNCCY 1 cut(s) 553
EcoRII CCWGG 2 cut(s) 262, 549
EcoT22I ATGCAT 1 cut(s) 575
EcoT38I GRGCYC 1 cut(s) 189
FaeI CATG 4 cut(s) 577, 644, 682, 730
FaqI GGGAC 1 cut(s) 744
FatI CATG 4 cut(s) 573, 640, 678, 726
Fnu4HI GCNGC 2 cut(s) 18, 593
FokI GGATG 2 cut(s) 7, 672
FriOI GRGCYC 1 cut(s) 189
Fsp4HI GCNGC 2 cut(s) 18, 593
FspBI CTAG 3 cut(s) 296, 360, 557
GluI GCNGC 2 cut(s) 18, 593
GsaI CCCAGC 1 cut(s) 9
GsuI CTGGAG 2 cut(s) 246, 533
HaeIII GGCC 2 cut(s) 267, 287
HapII CCGG 3 cut(s) 288, 459, 750
HgaI GACGC 1 cut(s) 109
Hin1II CATG 4 cut(s) 577, 644, 682, 730
HindIII AAGCTT 1 cut(s) 473
HinfI GANTC 5 cut(s) 68, 167, 403, 631, 662
HpaII CCGG 3 cut(s) 288, 459, 750
Hpy166II GTNNAC 1 cut(s) 323
Hpy188I TCNGA 2 cut(s) 25, 73
Hpy188III TCNNGA 5 cut(s) 97, 360, 407, 459, 707
Hpy8I GTNNAC 1 cut(s) 323
Hpy99I CGWCG 1 cut(s) 125
HpyAV CCTTC 5 cut(s) 68, 182, 200, 278, 762
HpyCH4IV ACGT 3 cut(s) 340, 352, 618
HpyCH4V TGCA 6 cut(s) 49, 58, 245, 573, 652, 792
HpyF10VI GCNNNNNNNGC 1 cut(s) 55
HpyF3I CTNAG 2 cut(s) 29, 248
HpySE526I ACGT 3 cut(s) 340, 352, 618
Hsp92II CATG 4 cut(s) 577, 644, 682, 730
Kpn2I TCCGGA 1 cut(s) 458
KpnI GGTACC 1 cut(s) 308
Kzo9I GATC 2 cut(s) 25, 682
LmnI GCTCC 1 cut(s) 192
Lsp1109I GCAGC 1 cut(s) 29
LweI GCATC 2 cut(s) 29, 102
MaeI CTAG 3 cut(s) 296, 360, 557
MaeII ACGT 3 cut(s) 340, 352, 618
MaeIII GTNAC 2 cut(s) 146, 164
MalI GATC 2 cut(s) 27, 684
MboI GATC 2 cut(s) 25, 682
MboII GAAGA 4 cut(s) 224, 233, 380, 383
MhlI GDGCHC 1 cut(s) 189
MluCI AATT 6 cut(s) 35, 84, 423, 446, 487, 798
MlyI GAGTC 2 cut(s) 161, 671
MnlI CCTC 8 cut(s) 217, 267, 270, 318, 393, 455, 509, 668
Mph1103I ATGCAT 1 cut(s) 575
MroI TCCGGA 1 cut(s) 458
MseI TTAA 5 cut(s) 87, 240, 426, 477, 581
MspCI CTTAAG 1 cut(s) 476
MspI CCGG 3 cut(s) 288, 459, 750
MspR9I CCNGG 2 cut(s) 264, 551
Mva1269I GAATGC 1 cut(s) 575
MvaI CCWGG 2 cut(s) 264, 551
MwoI GCNNNNNNNGC 1 cut(s) 55
NdeII GATC 2 cut(s) 25, 682
NlaIII CATG 4 cut(s) 577, 644, 682, 730
NlaIV GGNNCC 1 cut(s) 306
NmuCI GTSAC 2 cut(s) 146, 164
NsiI ATGCAT 1 cut(s) 575
NspI RCATGY 1 cut(s) 644
PceI AGGCCT 1 cut(s) 267
PctI GAATGC 1 cut(s) 575
PfeI GAWTC 3 cut(s) 68, 403, 631
PkrI GCNGC 2 cut(s) 19, 594
PleI GAGTC 2 cut(s) 161, 670
PpsI GAGTC 2 cut(s) 161, 670
Ppu21I YACGTR 1 cut(s) 341
PpuMI RGGWCCY 1 cut(s) 553
PshBI ATTAAT 1 cut(s) 426
Psp124BI GAGCTC 1 cut(s) 189
Psp5II RGGWCCY 1 cut(s) 553
Psp6I CCWGG 2 cut(s) 262, 549
PspFI CCCAGC 1 cut(s) 5
PspGI CCWGG 2 cut(s) 262, 549
PspN4I GGNNCC 1 cut(s) 306
PspPI GGNCC 2 cut(s) 157, 553
PspPPI RGGWCCY 1 cut(s) 553
PstNI CAGNNNCTG 1 cut(s) 46
RsaI GTAC 3 cut(s) 306, 696, 773
RsaNI GTAC 3 cut(s) 305, 695, 772
SacI GAGCTC 1 cut(s) 189
SaqAI TTAA 5 cut(s) 87, 240, 426, 477, 581
SatI GCNGC 2 cut(s) 18, 593
Sau3AI GATC 2 cut(s) 25, 682
Sau96I GGNCC 2 cut(s) 157, 553
SchI GAGTC 2 cut(s) 161, 671
ScrFI CCNGG 2 cut(s) 264, 551
SduI GDGCHC 1 cut(s) 189
SfaNI GCATC 2 cut(s) 29, 102
SfcI CTRYAG 1 cut(s) 522
SinI GGWCC 2 cut(s) 157, 553
SmlI CTYRAG 1 cut(s) 476
SmoI CTYRAG 1 cut(s) 476
Sse9I AATT 6 cut(s) 35, 84, 423, 446, 487, 798
SseBI AGGCCT 1 cut(s) 267
SsiI CCGC 1 cut(s) 593
SspMI CTAG 3 cut(s) 296, 360, 557
SstI GAGCTC 1 cut(s) 189
StuI AGGCCT 1 cut(s) 267
StyD4I CCNGG 2 cut(s) 262, 549
TaiI ACGT 3 cut(s) 343, 355, 621
TaqI TCGA 1 cut(s) 235
TasI AATT 6 cut(s) 35, 84, 423, 446, 487, 798
TauI GCSGC 1 cut(s) 595
TfiI GAWTC 3 cut(s) 68, 403, 631
Tru1I TTAA 5 cut(s) 87, 240, 426, 477, 581
Tru9I TTAA 5 cut(s) 87, 240, 426, 477, 581
TseFI GTSAC 2 cut(s) 146, 164
TseI GCWGC 1 cut(s) 17
Tsp45I GTSAC 2 cut(s) 146, 164
TspDTI ATGAA 2 cut(s) 234, 457
TspGWI ACGGA 1 cut(s) 655
Vha464I CTTAAG 1 cut(s) 476
VpaK11BI GGWCC 2 cut(s) 157, 553
VspI ATTAAT 1 cut(s) 426
XagI CCTNNNNNAGG 2 cut(s) 261, 272
XapI RAATTY 2 cut(s) 487, 798
XbaI TCTAGA 1 cut(s) 359
XceI RCATGY 1 cut(s) 644
XspI CTAG 3 cut(s) 296, 360, 557
Zsp2I ATGCAT 1 cut(s) 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.