RchiOBHm_Chr6g0278241

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000110
Physical Location & Seq
Forward (+)
41245076 .. 41246929
1854 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24958

Sequence Viewer

Length: 1686 bp
ATGATGATATGTGTTATGTCCATATTTGATCTTACATCTTTTCCATATGGGCTTGGAAGTTATGTCCACCATGTTCAGCCTCTAAACAAGAGTGAGGCGTGGCATCTTTTTTCCATGAAAGCTTTCTTCAGTTGTCCTAATAGCTGTTGTCCAACTGAGCTCGAACATATAGCTAGAGATCTTGTTGACAAATGCGAAGGCTTACCTCTAGGAATTGTTGCTTTGGGCGCTCTCATGTCAACCAAAAGTGTTCTGGCCGAGTGGATGAAGGTTTACGGCAGCTTGAACTGGGAGCTATGCAACAACCCTAGGCTTGAAGTGGTGAAGAGCATCTTACTGTTGAGCTTCAATGATTTACCGTACCGGCTAAAGCATTGCTTCCTATATTGTTGTGTTTTCCCTGAAGATTATGTGATCCAGTGTAGAAGGCTTATTAGACTGTGGATAGCGGAGGGGTTTGTGGAACAAGTTAGAGGTCCAAAGACAGAAGAGATAGCTGAGAGCTACATGGCGGAGCTCACGTGTCGATGCATGCTTCAAGTAGTTGAGAGGGAACCATCTGGGAGGGCAGAAACATTTAGGATGCATGATCTTCTGCGAGAACTCTGCATTTCAATTTCAGAAGCTGAGAACTTTTGTACCATATACAATGACCAAGAACCAGCTAAAGAGAGCAAGGCTCGCCGCGTGTCAATGCAAGCGAATTCTCGAGCACTAAGAAATCCGAAAGACATTTCGAAGGTTCGCACATTTTTCATGTTTGCTGCTTTTTCATTGAATTATCTGCCATCTGGTTTCCAACTGTTGAGAATCCTAGACCTTGAAGATGTTCCGATTGTGCAGTTGCCAGATGACATAGTGAACTGCTTCAATTTGATGTATTTAAATTTGAGAAGAACAAAAGTTAAAGAGCTTCCCAAAGACATCGGGAAACTCAGCAACTTAGAAATGCTAAACATAAGCAATTCGAAAACTAGATTACTTCCGGTTGGGATTTTGAAGTTACAGAAGCTACACCATCTCTTGATGTTGCATTTTAATGATCAAAAGTTGTGTTCTTTTGATTGTCTTGACGGCTGCACACAAGCTCCGCCGGGCATTTGTAAGCTAAAGAGCTTACAAGTTCTGGATACAGTCAAGGTGGAAGGCGAGTTGATCGAACAACTTCAGTCCATGACGCAACTCACAAGACTAGGCTTAGCAAATGTGAGGGAAGCTGATGAAAAAGATCTATGCAAGGCGCTCGAAAACGTGAAACTCATTGAGCAGTTGAATGTCATGACAACCGATGAGGATGAGGTGTTGCGCATATATGGACGCATTAGCGGAGGGTCCTCCAATGCTCAACACACTTTTCCTAACTGGAAATGGATTCCGAAAGCTCACCGAGTTGATACTGCTCAACTTTTCTCAGTTGTCTGTGATCATCAATTCATCATAGAGAAGGGAGTGATGCCGGCATTAAAGACACTGGATATATGGGAATGCATGCAGTTGAAGCAAATTCCTCGGGGCATTGAACATCTCACAAATCTCAAACAATTGACTCTGTTAGGTGTTCCGAATGAGCTGATTGAGTGCATACGAGGAGAAGGAAGCATGGATAACTCAAAGGTTAAGCAGATTCCCAACATTGGTTATTGCTACAGAACTAGGTTTGGGTGGTCTCATGGTAGAACGCGATGA

Protein Analysis

561

Amino Acids

64.25

Weight (kDa)

7.44

Isoelectric Point (pI)

42.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 132 - 202 6.7e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 247 - 431 8.2e-26 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1307
AccII CGCG 2 cut(s) 687, 1681
AciI CCGC 5 cut(s) 449, 512, 685, 1091, 1326
AclWI GGATC 1 cut(s) 409
AcoI YGGCCR 1 cut(s) 255
AcsI RAATTY 3 cut(s) 703, 886, 1503
AcuI CTGAAG 3 cut(s) 112, 423, 1151
AcvI CACGTG 1 cut(s) 522
AfaI GTAC 2 cut(s) 362, 640
AfiI CCNNNNNNNGG 1 cut(s) 1634
AflIII ACRYGT 1 cut(s) 521
Alw21I GWGCWC 3 cut(s) 162, 519, 715
Alw26I GTCTC 1 cut(s) 1671
AlwI GGATC 1 cut(s) 409
AlwNI CAGNNNCTG 1 cut(s) 626
Ama87I CYCGRG 2 cut(s) 708, 1509
AoxI GGCC 1 cut(s) 255
ApeKI GCWGC 3 cut(s) 279, 764, 1077
ApoI RAATTY 3 cut(s) 703, 886, 1503
Asp700I GAANNNNTTC 4 cut(s) 122, 828, 866, 1164
AspA2I CCTAGG 1 cut(s) 308
AspLEI GCGC 3 cut(s) 230, 1243, 1308
AspS9I GGNCC 2 cut(s) 476, 1332
AsuC2I CCSGG 1 cut(s) 1095
AsuHPI GGTGA 2 cut(s) 334, 1376
AsuII TTCGAA 2 cut(s) 737, 968
AvaI CYCGRG 2 cut(s) 708, 1509
AvaII GGWCC 2 cut(s) 476, 1332
AvrII CCTAGG 1 cut(s) 308
BaeI ACNNNNGTAYC 2 cut(s) 622, 655
BanII GRGCYC 2 cut(s) 162, 519
BbrPI CACGTG 1 cut(s) 522
Bbv12I GWGCWC 3 cut(s) 162, 519, 715
BbvI GCAGC 3 cut(s) 291, 751, 1064
BccI CCATC 3 cut(s) 565, 796, 1026
BceAI ACGGC 2 cut(s) 292, 1090
BcgI CGANNNNNNTGC 6 cut(s) 588, 622, 1225, 1259, 1490, 1524
BciVI GTATCC 1 cut(s) 1123
BclI TGATCA 2 cut(s) 1042, 1423
BcnI CCSGG 1 cut(s) 1095
BcoDI GTCTC 1 cut(s) 1671
BfaI CTAG 7 cut(s) 174, 209, 309, 815, 975, 1193, 1653
BfmI CTRYAG 1 cut(s) 1645
BfoI RGCGCY 2 cut(s) 231, 1244
BfuI GTATCC 1 cut(s) 1123
BglII AGATCT 2 cut(s) 178, 1228
BisI GCNGC 4 cut(s) 280, 685, 765, 1078
BlnI CCTAGG 1 cut(s) 308
BlpI GCTNAGC 1 cut(s) 1198
BlsI GCNGC 4 cut(s) 281, 686, 766, 1079
Bme1390I CCNGG 1 cut(s) 1095
Bme18I GGWCC 2 cut(s) 476, 1332
BmeT110I CYCGRG 2 cut(s) 708, 1509
BmgT120I GGNCC 2 cut(s) 476, 1332
BmiI GGNNCC 2 cut(s) 555, 1333
BmrFI CCNGG 1 cut(s) 1095
BmrI ACTGGG 1 cut(s) 298
BmsI GCATC 5 cut(s) 112, 339, 518, 573, 1443
BmuI ACTGGG 1 cut(s) 298
BplI GAGNNNNNCTC 2 cut(s) 664, 696
Bpu1102I GCTNAGC 1 cut(s) 1198
Bpu14I TTCGAA 2 cut(s) 737, 968
BpuMI CCSGG 1 cut(s) 1095
BsaAI YACGTR 1 cut(s) 522
BsaI GGTCTC 1 cut(s) 1671
BsaJI CCNNGG 2 cut(s) 308, 1508
BsaWI WCCGGW 1 cut(s) 985
BsaXI ACNNNNNCTCC 4 cut(s) 506, 536, 1072, 1102
Bsc4I CCNNNNNNNGG 1 cut(s) 1634
Bse118I RCCGGY 2 cut(s) 363, 1456
Bse1I ACTGG 4 cut(s) 293, 418, 1367, 1476
Bse3DI GCAATG 1 cut(s) 373
BseDI CCNNGG 2 cut(s) 308, 1508
BseGI GGATG 3 cut(s) 270, 588, 1300
BseLI CCNNNNNNNGG 1 cut(s) 1634
BseMI GCAATG 1 cut(s) 373
BseMII CTCAG 5 cut(s) 147, 489, 618, 949, 1425
BseNI ACTGG 4 cut(s) 293, 418, 1367, 1476
BseRI GAGGAG 1 cut(s) 1602
BseXI GCAGC 3 cut(s) 291, 751, 1064
BsgI GTGCAG 2 cut(s) 860, 1063
Bsh1236I CGCG 2 cut(s) 687, 1681
BshFI GGCC 1 cut(s) 257
BsiHKAI GWGCWC 3 cut(s) 162, 519, 715
BsiHKCI CYCGRG 2 cut(s) 708, 1509
BsiSI CCGG 4 cut(s) 364, 986, 1094, 1457
BslI CCNNNNNNNGG 1 cut(s) 1634
BsmAI GTCTC 1 cut(s) 1671
BsmI GAATGC 1 cut(s) 1490
BsnI GGCC 1 cut(s) 257
Bso31I GGTCTC 1 cut(s) 1671
BsoBI CYCGRG 2 cut(s) 708, 1509
Bsp119I TTCGAA 2 cut(s) 737, 968
Bsp1286I GDGCHC 3 cut(s) 162, 519, 715
Bsp143I GATC 8 cut(s) 28, 178, 414, 589, 1042, 1155, 1228, 1423
Bsp1720I GCTNAGC 1 cut(s) 1198
BspACI CCGC 5 cut(s) 449, 512, 685, 1091, 1326
BspANI GGCC 1 cut(s) 257
BspCNI CTCAG 5 cut(s) 148, 490, 619, 948, 1424
BspFNI CGCG 2 cut(s) 687, 1681
BspHI TCATGA 1 cut(s) 1278
BspLI GGNNCC 2 cut(s) 555, 1333
BspPI GGATC 1 cut(s) 409
BspQI GCTCTTC 1 cut(s) 320
BspT104I TTCGAA 2 cut(s) 737, 968
BspTNI GGTCTC 1 cut(s) 1671
BsrDI GCAATG 1 cut(s) 373
BsrFI RCCGGY 2 cut(s) 363, 1456
BsrI ACTGG 4 cut(s) 293, 418, 1367, 1476
BssAI RCCGGY 2 cut(s) 363, 1456
BssECI CCNNGG 2 cut(s) 308, 1508
BssMI GATC 8 cut(s) 28, 178, 414, 589, 1042, 1155, 1228, 1423
BssT1I CCWWGG 1 cut(s) 308
Bst4CI ACNGT 5 cut(s) 339, 360, 441, 804, 1135
Bst6I CTCTTC 2 cut(s) 320, 483
BstBAI YACGTR 1 cut(s) 522
BstBI TTCGAA 2 cut(s) 737, 968
BstC8I GCNNGC 5 cut(s) 533, 682, 699, 1458, 1490
BstDEI CTNAG 8 cut(s) 156, 498, 627, 716, 935, 943, 1198, 1411
BstF5I GGATG 3 cut(s) 270, 588, 1300
BstFNI CGCG 2 cut(s) 687, 1681
BstH2I RGCGCY 2 cut(s) 231, 1244
BstHHI GCGC 3 cut(s) 230, 1243, 1308
BstKTI GATC 8 cut(s) 31, 181, 417, 592, 1045, 1158, 1231, 1426
BstMAI GTCTC 1 cut(s) 1671
BstMBI GATC 8 cut(s) 28, 178, 414, 589, 1042, 1155, 1228, 1423
BstMWI GCNNNNNNNGC 3 cut(s) 227, 681, 1498
BstNSI RCATGY 2 cut(s) 535, 1492
BstSCI CCNGG 1 cut(s) 1093
BstSFI CTRYAG 1 cut(s) 1645
BstUI CGCG 2 cut(s) 687, 1681
BstV1I GCAGC 3 cut(s) 291, 751, 1064
BstX2I RGATCY 2 cut(s) 178, 1228
BstYI RGATCY 2 cut(s) 178, 1228
BsuI GTATCC 1 cut(s) 1123
BsuRI GGCC 1 cut(s) 257
BtsCI GGATG 3 cut(s) 270, 588, 1300
BtsIMutI CAGTG 2 cut(s) 425, 1469
Cac8I GCNNGC 5 cut(s) 533, 682, 699, 1458, 1490
CaiI CAGNNNCTG 1 cut(s) 626
CciI TCATGA 1 cut(s) 1278
CfoI GCGC 3 cut(s) 230, 1243, 1308
Cfr10I RCCGGY 2 cut(s) 363, 1456
Cfr13I GGNCC 2 cut(s) 476, 1332
CseI GACGC 2 cut(s) 1186, 1326
Csp6I GTAC 2 cut(s) 361, 639
CviQI GTAC 2 cut(s) 361, 639
DdeI CTNAG 8 cut(s) 156, 498, 627, 716, 935, 943, 1198, 1411
DpnI GATC 8 cut(s) 30, 180, 416, 591, 1044, 1157, 1230, 1425
DpnII GATC 8 cut(s) 28, 178, 414, 589, 1042, 1155, 1228, 1423
DraI TTTAAA 1 cut(s) 885
EaeI YGGCCR 1 cut(s) 255
Eam1104I CTCTTC 2 cut(s) 320, 483
EarI CTCTTC 2 cut(s) 320, 483
EciI GGCGGA 2 cut(s) 527, 1080
Ecl136II GAGCTC 2 cut(s) 160, 517
Eco130I CCWWGG 1 cut(s) 308
Eco24I GRGCYC 2 cut(s) 162, 519
Eco31I GGTCTC 1 cut(s) 1671
Eco47I GGWCC 2 cut(s) 476, 1332
Eco53kI GAGCTC 2 cut(s) 160, 517
Eco57I CTGAAG 3 cut(s) 112, 423, 1151
Eco72I CACGTG 1 cut(s) 522
Eco88I CYCGRG 2 cut(s) 708, 1509
EcoICRI GAGCTC 2 cut(s) 160, 517
EcoO109I RGGNCCY 1 cut(s) 1332
EcoRI GAATTC 1 cut(s) 703
EcoT14I CCWWGG 1 cut(s) 308
EcoT22I ATGCAT 3 cut(s) 533, 588, 1490
EcoT38I GRGCYC 2 cut(s) 162, 519
ErhI CCWWGG 1 cut(s) 308
FalI AAGNNNNNCTT 4 cut(s) 317, 349, 362, 394
FauNDI CATATG 1 cut(s) 46
FbaI TGATCA 2 cut(s) 1042, 1423
Fnu4HI GCNGC 4 cut(s) 280, 685, 765, 1078
FokI GGATG 3 cut(s) 277, 595, 1307
FriOI GRGCYC 2 cut(s) 162, 519
Fsp4HI GCNGC 4 cut(s) 280, 685, 765, 1078
FspBI CTAG 7 cut(s) 174, 209, 309, 815, 975, 1193, 1653
FspI TGCGCA 1 cut(s) 1307
GlaI GCGC 3 cut(s) 229, 1242, 1307
GluI GCNGC 4 cut(s) 280, 685, 765, 1078
HaeII RGCGCY 2 cut(s) 231, 1244
HaeIII GGCC 1 cut(s) 257
HapII CCGG 4 cut(s) 364, 986, 1094, 1457
HgaI GACGC 2 cut(s) 1186, 1326
HhaI GCGC 3 cut(s) 230, 1243, 1308
Hin6I GCGC 3 cut(s) 228, 1241, 1306
HinP1I GCGC 3 cut(s) 228, 1241, 1306
HincII GTYRAC 2 cut(s) 187, 240
HindII GTYRAC 2 cut(s) 187, 240
HindIII AAGCTT 1 cut(s) 120
HinfI GANTC 4 cut(s) 810, 1372, 1546, 1624
HpaII CCGG 4 cut(s) 364, 986, 1094, 1457
HphI GGTGA 2 cut(s) 334, 1376
Hpy166II GTNNAC 5 cut(s) 67, 187, 240, 274, 862
Hpy188I TCNGA 5 cut(s) 622, 726, 834, 1377, 1563
Hpy188III TCNNGA 6 cut(s) 708, 928, 1024, 1070, 1127, 1279
Hpy8I GTNNAC 5 cut(s) 67, 187, 240, 274, 862
HpyAV CCTTC 7 cut(s) 191, 262, 420, 733, 1139, 1438, 1586
HpyCH4III ACNGT 5 cut(s) 339, 360, 441, 804, 1135
HpyCH4IV ACGT 2 cut(s) 521, 1251
HpyF10VI GCNNNNNNNGC 3 cut(s) 227, 681, 1498
HpyF3I CTNAG 8 cut(s) 156, 498, 627, 716, 935, 943, 1198, 1411
HpySE526I ACGT 2 cut(s) 521, 1251
HspAI GCGC 3 cut(s) 228, 1241, 1306
KroI GCCGGC 1 cut(s) 1456
KroNI GCCGGC 1 cut(s) 1458
Ksp22I TGATCA 2 cut(s) 1042, 1423
Kzo9I GATC 8 cut(s) 28, 178, 414, 589, 1042, 1155, 1228, 1423
LguI GCTCTTC 1 cut(s) 320
LmnI GCTCC 3 cut(s) 292, 514, 1093
Lsp1109I GCAGC 3 cut(s) 291, 751, 1064
LweI GCATC 5 cut(s) 112, 339, 518, 573, 1443
MaeI CTAG 7 cut(s) 174, 209, 309, 815, 975, 1193, 1653
MaeII ACGT 2 cut(s) 521, 1251
MaeIII GTNAC 1 cut(s) 1002
MalI GATC 8 cut(s) 30, 180, 416, 591, 1044, 1157, 1230, 1425
MboI GATC 8 cut(s) 28, 178, 414, 589, 1042, 1155, 1228, 1423
MboII GAAGA 7 cut(s) 118, 337, 416, 500, 584, 836, 906
MfeI CAATTG 1 cut(s) 1541
MflI RGATCY 2 cut(s) 178, 1228
MhlI GDGCHC 3 cut(s) 162, 519, 715
MlyI GAGTC 1 cut(s) 1540
MmeI TCCRAC 2 cut(s) 176, 823
Mph1103I ATGCAT 3 cut(s) 533, 588, 1490
MroNI GCCGGC 1 cut(s) 1456
MroXI GAANNNNTTC 4 cut(s) 122, 828, 866, 1164
MseI TTAA 5 cut(s) 884, 906, 1038, 1463, 1617
MslI CAYNNNNRTG 1 cut(s) 1038
MspI CCGG 4 cut(s) 364, 986, 1094, 1457
MspR9I CCNGG 1 cut(s) 1095
MunI CAATTG 1 cut(s) 1541
Mva1269I GAATGC 1 cut(s) 1490
MvnI CGCG 2 cut(s) 687, 1681
MwoI GCNNNNNNNGC 3 cut(s) 227, 681, 1498
NaeI GCCGGC 1 cut(s) 1458
NciI CCSGG 1 cut(s) 1095
NdeI CATATG 1 cut(s) 46
NdeII GATC 8 cut(s) 28, 178, 414, 589, 1042, 1155, 1228, 1423
NgoMIV GCCGGC 1 cut(s) 1456
NlaIV GGNNCC 2 cut(s) 555, 1333
NmeAIII GCCGAG 1 cut(s) 283
NsbI TGCGCA 1 cut(s) 1307
NsiI ATGCAT 3 cut(s) 533, 588, 1490
NspI RCATGY 2 cut(s) 535, 1492
NspV TTCGAA 2 cut(s) 737, 968
PaeI GCATGC 2 cut(s) 535, 1492
PaeR7I CTCGAG 1 cut(s) 708
PagI TCATGA 1 cut(s) 1278
PciSI GCTCTTC 1 cut(s) 320
PctI GAATGC 1 cut(s) 1490
PdiI GCCGGC 1 cut(s) 1458
PdmI GAANNNNTTC 4 cut(s) 122, 828, 866, 1164
PfeI GAWTC 3 cut(s) 810, 1372, 1624
PkrI GCNGC 4 cut(s) 281, 686, 766, 1079
PleI GAGTC 1 cut(s) 1540
PmaCI CACGTG 1 cut(s) 522
PmlI CACGTG 1 cut(s) 522
PpsI GAGTC 1 cut(s) 1540
Ppu21I YACGTR 1 cut(s) 522
PpuMI RGGWCCY 1 cut(s) 1332
Psp124BI GAGCTC 2 cut(s) 162, 519
Psp5II RGGWCCY 1 cut(s) 1332
PspCI CACGTG 1 cut(s) 522
PspN4I GGNNCC 2 cut(s) 555, 1333
PspPI GGNCC 2 cut(s) 476, 1332
PspPPI RGGWCCY 1 cut(s) 1332
PstNI CAGNNNCTG 1 cut(s) 626
PsuI RGATCY 2 cut(s) 178, 1228
RsaI GTAC 2 cut(s) 362, 640
RsaNI GTAC 2 cut(s) 361, 639
RseI CAYNNNNRTG 1 cut(s) 1038
SacI GAGCTC 2 cut(s) 162, 519
SapI GCTCTTC 1 cut(s) 320
SaqAI TTAA 5 cut(s) 884, 906, 1038, 1463, 1617
SatI GCNGC 4 cut(s) 280, 685, 765, 1078
Sau3AI GATC 8 cut(s) 28, 178, 414, 589, 1042, 1155, 1228, 1423
Sau96I GGNCC 2 cut(s) 476, 1332
SchI GAGTC 1 cut(s) 1540
ScrFI CCNGG 1 cut(s) 1095
SduI GDGCHC 3 cut(s) 162, 519, 715
SfaNI GCATC 5 cut(s) 112, 339, 518, 573, 1443
SfcI CTRYAG 1 cut(s) 1645
Sfr274I CTCGAG 1 cut(s) 708
SfuI TTCGAA 2 cut(s) 737, 968
SinI GGWCC 2 cut(s) 476, 1332
SlaI CTCGAG 1 cut(s) 708
SmiI ATTTAAAT 1 cut(s) 885
SmiMI CAYNNNNRTG 1 cut(s) 1038
SmlI CTYRAG 1 cut(s) 708
SmoI CTYRAG 1 cut(s) 708
SphI GCATGC 2 cut(s) 535, 1492
SsiI CCGC 5 cut(s) 449, 512, 685, 1091, 1326
SspMI CTAG 7 cut(s) 174, 209, 309, 815, 975, 1193, 1653
SstI GAGCTC 2 cut(s) 162, 519
StyD4I CCNGG 1 cut(s) 1093
StyI CCWWGG 1 cut(s) 308
SwaI ATTTAAAT 1 cut(s) 885
TaaI ACNGT 5 cut(s) 339, 360, 441, 804, 1135
TaiI ACGT 2 cut(s) 524, 1254
TaqI TCGA 7 cut(s) 162, 526, 709, 737, 968, 1158, 1245
TauI GCSGC 1 cut(s) 687
TfiI GAWTC 3 cut(s) 810, 1372, 1624
Tru1I TTAA 5 cut(s) 884, 906, 1038, 1463, 1617
Tru9I TTAA 5 cut(s) 884, 906, 1038, 1463, 1617
TscAI CASTG 2 cut(s) 425, 1476
TseI GCWGC 3 cut(s) 279, 764, 1077
TspDTI ATGAA 6 cut(s) 131, 281, 745, 762, 1236, 1423
TspRI CASTG 2 cut(s) 425, 1476
VpaK11BI GGWCC 2 cut(s) 476, 1332
XapI RAATTY 3 cut(s) 703, 886, 1503
XceI RCATGY 2 cut(s) 535, 1492
XcmI CCANNNNNNNNNTGG 1 cut(s) 250
XhoI CTCGAG 1 cut(s) 708
XmaJI CCTAGG 1 cut(s) 308
XmnI GAANNNNTTC 4 cut(s) 122, 828, 866, 1164
XspI CTAG 7 cut(s) 174, 209, 309, 815, 975, 1193, 1653
Zsp2I ATGCAT 3 cut(s) 533, 588, 1490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.