Rmu_sc0003835.1_g000020

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003835.1
Physical Location & Seq
Forward (+)
98312 .. 101047
2736 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003835.1_g000020.1.cds

Sequence Viewer

Length: 2736 bp
atggcatcagctgcacaagatctcctgcttggcaaaattgtagccattcttgagaacgaagcatcctccatagccggtgttcgcgataaagttgatgacattaaacaagagcttgtaagcatgaaagccttcctaaaggatgctgagggaaagaaagcacaaatggagggaggggagacatggataacaagcgtgagagactctgtctatgagattgaagataccattgatgaattcacatatcgcatctatgagctgaaatgcggagttccagttgcaaggtgtcttcacgtaacatttcatattccaaagaatctttggtataggcgtcaaatcgccaaaaaattggacaaaatcaaaggagccatcaaagccatttcggagaggaatcagacatatggtgttagtgttgttactgctctagaaggaacgagtacttctcatgatcatattcaaaaattgatgcgcaaccaagcagaggcttctctctttactaatgaagatgagcttgtcgggattgaagccccaaaaagggtattaatggaacatatagtgaatggacagcagagccaagccattgtctccgtgttcgggatgggaggatctgggaaaaccactcttgttgctaagatcttcaacaatgacattgtaaagagacatttcaattgctatgcatgggttactgtttcacaaacttacttgattgaagacttatttagaagcttgatcaagcaattccatgaagcaaggaaggaggaggttccaagagacattaacatgatgagcttcagagaattggcagagattcttgtgaactacctgaactcaaaaaggtatctagttgtgctggatgatgtatgggacataaatctttggtcacaaataagggtatcacttcaagacagaaaacttggaagtcgagttgtactcaccactcggaacgatgacatagcaaaatatgcttttggagttgcaagccatgttcacaatattcaacccctgggaaaggagaacacttgggagcttttttccaggaaggcattctctactcatcctaataaatcttgtccacttgaacttgagccatttgctcgggaacttgtggggaagtgtaatggccttcctctggcaattgtagcattaagtggtctcatgtcatccaaaaagtcatgtttagagtggagcaatgtttgcaatagcttaaattggcatctcacaaatgatcctttactgggctatatgaagagcattttattgctcagtttcaatgacttgtcataccgattgaagcattgtttcctctattgttctctttttccagaagattatttaatgagcagaaaacgactcattagattgtggatagccgaaggattcgttgaacatgtgaaaggtgtcacaccggaagtgattgcagataaatatcttttggaactttgttttcgtagcatgctacaagttgtggagaggaatcaagcaggaaggccaaaaaaatgcaagatgcatgatgtcatgcgagagcttgctctttcaatatccgagaaagaaaagtttggtgctgtgtatgatgggaaagatgaagcaattgaagcccgccgtttgtcaattcaatctgaaggagaaattaaatccagcacaggtatatcacagcttcggtctattcttgtctttgtcaaagagacaacgttgccttctgattgcaaatttttgagggtgctagacttggaggatgtgtcaatcactaaactgccggataatcttaggtacttattcaacttaagatatttaaatttgagtggaacggatatcaaggagcttccaaaatccataggaaagctacgcaaccttcaaaccttgatcatccgcaacagtgagatagagaaacttccaaaaggaattgccaagttgttaaatctgcgccatctacgtatgtcccgttacactgatgattatcttgggtttagatatgtcaaagggacgagagtaccaatggatgttagtaagatgaataacttgcaagttttggcttctgttgaggcagaaggagacactattaggcaggtcggttgtatgacccaacttgtaaggattggaattactaatgtgaaagaaagcgacgagacgcacctgtgtgacagcattcaaaagttgcagctccttcacttcttgtttctaatggcaagtgatgcagaggagactcttcgaacaaatgcaatatgttcacctcctcccctacttcaagtggttatgttggctggccgactggagaatgtaccactttggtttcgctcactccagagccttacatatctgtatctgcattggtctcaacttgaagaagatttggtacctcacattgaagcactgcccaatctgggacgtcttactcttattaatgcatatgtcgggaaacagctgtattttcgccgaggttttgtaaagctaaaaaatctcaggttgcgtaatcatcccttgttgacagaaataactatagagaatggggtgatgccaaatctcaagcacttgcttgttgagagctgcatgtcattaaggacattgccactgggtcttgaattccttactaatcttcaaaagttgacactagggacggttccagagaaaattatactgcccattcggaaaggagctgcagatcgtccaaaggttcaacacatccctgaaatcctctatttctatgaagagtcatctatgaggttcgatgaaagattgtcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

911

Amino Acids

104.07

Weight (kDa)

8.77

Isoelectric Point (pI)

46.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2383
Acc16I TGCGCA 1 cut(s) 467
Acc36I ACCTGC 1 cut(s) 2050
Acc65I GGTACC 1 cut(s) 2347
AccB1I GGYRCC 1 cut(s) 2347
AccII CGCG 1 cut(s) 84
AciI CCGC 3 cut(s) 264, 1594, 1864
AclI AACGTT 1 cut(s) 1685
AclWI GGATC 2 cut(s) 610, 1217
AcoI YGGCCR 1 cut(s) 2257
AcsI RAATTY 4 cut(s) 233, 1703, 1789, 2573
AcuI CTGAAG 2 cut(s) 772, 1635
AcyI GRCGYC 2 cut(s) 328, 2380
AfaI GTAC 6 cut(s) 436, 927, 1766, 1986, 2274, 2349
AfiI CCNNNNNNNGG 8 cut(s) 478, 531, 532, 591, 1006, 1126, 1232, 2375
AflII CTTAAG 1 cut(s) 1777
AflIII ACRYGT 1 cut(s) 1384
AjnI CCWGG 2 cut(s) 999, 1031
AleI CACNNNNGTG 1 cut(s) 2130
AloI GAACNNNNNNTCC 2 cut(s) 47, 79
AlwI GGATC 2 cut(s) 610, 1217
Ama87I CYCGRG 1 cut(s) 1092
AoxI GGCC 3 cut(s) 1117, 1484, 2257
ApeKI GCWGC 4 cut(s) 11, 2152, 2538, 2648
ApoI RAATTY 4 cut(s) 233, 1703, 1789, 2573
AseI ATTAAT 2 cut(s) 539, 2394
Asp700I GAANNNNTTC 2 cut(s) 128, 1040
Asp718I GGTACC 1 cut(s) 2347
AspLEI GCGC 2 cut(s) 468, 1920
AsuHPI GGTGA 3 cut(s) 922, 2214, 2515
AsuII TTCGAA 1 cut(s) 2203
AvaI CYCGRG 1 cut(s) 1092
BaeI ACNNNNGTAYC 2 cut(s) 1968, 2001
BanI GGYRCC 1 cut(s) 2347
BarI GAAGNNNNNNTAC 2 cut(s) 2331, 2363
BbsI GAAGAC 2 cut(s) 278, 714
BbvCI CCTCAGC 1 cut(s) 144
BbvI GCAGC 3 cut(s) 2164, 2525, 2635
BccI CCATC 4 cut(s) 374, 589, 1562, 1929
BceAI ACGGC 1 cut(s) 1581
BciT130I CCWGG 2 cut(s) 1001, 1033
BclI TGATCA 3 cut(s) 445, 726, 1857
BfaI CTAG 5 cut(s) 422, 839, 1718, 2603, 2734
BfmI CTRYAG 2 cut(s) 2490, 2649
BfrI CTTAAG 1 cut(s) 1777
BfuAI ACCTGC 1 cut(s) 2050
BglII AGATCT 2 cut(s) 19, 630
BisI GCNGC 4 cut(s) 12, 2153, 2539, 2649
BlsI GCNGC 4 cut(s) 13, 2154, 2540, 2650
BmcAI AGTACT 1 cut(s) 436
Bme1390I CCNGG 2 cut(s) 1001, 1033
BmeT110I CYCGRG 1 cut(s) 1092
BmiI GGNNCC 4 cut(s) 364, 762, 2349, 2613
BmrFI CCNGG 2 cut(s) 1001, 1033
BmrI ACTGGG 2 cut(s) 1241, 2573
BmsI GCATC 9 cut(s) 14, 71, 130, 255, 453, 1219, 1491, 2176, 2496
BmuI ACTGGG 2 cut(s) 1241, 2573
BpiI GAAGAC 2 cut(s) 278, 714
BplI GAGNNNNNCTC 4 cut(s) 424, 456, 912, 944
BpmI CTGGAG 2 cut(s) 2279, 2285
Bpu10I CCTNAGC 1 cut(s) 144
Bpu14I TTCGAA 1 cut(s) 2203
BpuEI CTTGAG 3 cut(s) 71, 1100, 2501
BsaAI YACGTR 2 cut(s) 292, 1928
BsaBI GATNNNNATC 2 cut(s) 1422, 1950
BsaHI GRCGYC 2 cut(s) 328, 2380
BsaI GGTCTC 2 cut(s) 1154, 2331
BsaJI CCNNGG 3 cut(s) 999, 1000, 2428
BsaWI WCCGGW 1 cut(s) 1402
BsaXI ACNNNNNCTCC 6 cut(s) 6, 36, 258, 288, 1718, 1748
Bsc4I CCNNNNNNNGG 8 cut(s) 478, 531, 532, 591, 1006, 1126, 1232, 2375
Bse118I RCCGGY 1 cut(s) 74
Bse1I ACTGG 4 cut(s) 272, 1236, 2268, 2568
Bse3DI GCAATG 2 cut(s) 1192, 2555
Bse8I GATNNNNATC 2 cut(s) 1422, 1950
BseBI CCWGG 2 cut(s) 1001, 1033
BseDI CCNNGG 3 cut(s) 999, 1000, 2428
BseJI GATNNNNATC 2 cut(s) 1422, 1950
BseLI CCNNNNNNNGG 8 cut(s) 478, 531, 532, 591, 1006, 1126, 1232, 2375
BseMI GCAATG 2 cut(s) 1192, 2555
BseMII CTCAG 3 cut(s) 135, 1273, 2467
BseNI ACTGG 4 cut(s) 272, 1236, 2268, 2568
BseRI GAGGAG 3 cut(s) 770, 2207, 2217
BseXI GCAGC 3 cut(s) 2164, 2525, 2635
Bsh1236I CGCG 1 cut(s) 84
BshFI GGCC 3 cut(s) 1119, 1486, 2259
BshNI GGYRCC 1 cut(s) 2347
BsiHKCI CYCGRG 1 cut(s) 1092
BsiSI CCGG 3 cut(s) 75, 1403, 1751
BslFI GGGAC 5 cut(s) 875, 1918, 1990, 2391, 2620
BslI CCNNNNNNNGG 8 cut(s) 478, 531, 532, 591, 1006, 1126, 1232, 2375
BsmBI CGTCTC 1 cut(s) 2114
BsmFI GGGAC 5 cut(s) 875, 1918, 1990, 2391, 2620
BsmI GAATGC 2 cut(s) 1040, 2139
BsnI GGCC 3 cut(s) 1119, 1486, 2259
Bso31I GGTCTC 2 cut(s) 1154, 2331
BsoBI CYCGRG 1 cut(s) 1092
Bsp119I TTCGAA 1 cut(s) 2203
Bsp143I GATC 8 cut(s) 19, 445, 602, 630, 726, 1222, 1857, 2653
Bsp68I TCGCGA 1 cut(s) 84
BspACI CCGC 3 cut(s) 264, 1594, 1864
BspANI GGCC 3 cut(s) 1119, 1486, 2259
BspCNI CTCAG 3 cut(s) 136, 1272, 2466
BspFNI CGCG 1 cut(s) 84
BspHI TCATGA 1 cut(s) 442
BspLI GGNNCC 4 cut(s) 364, 762, 2349, 2613
BspMAI CTGCAG 1 cut(s) 2653
BspMI ACCTGC 1 cut(s) 2050
BspPI GGATC 2 cut(s) 610, 1217
BspQI GCTCTTC 1 cut(s) 1238
BspT104I TTCGAA 1 cut(s) 2203
BspT107I GGYRCC 1 cut(s) 2347
BspTI CTTAAG 1 cut(s) 1777
BspTNI GGTCTC 2 cut(s) 1154, 2331
BsrDI GCAATG 2 cut(s) 1192, 2555
BsrFI RCCGGY 1 cut(s) 74
BsrI ACTGG 4 cut(s) 272, 1236, 2268, 2568
BssAI RCCGGY 1 cut(s) 74
BssECI CCNNGG 3 cut(s) 999, 1000, 2428
BssMI GATC 8 cut(s) 19, 445, 602, 630, 726, 1222, 1857, 2653
BssNI GRCGYC 2 cut(s) 328, 2380
Bst2UI CCWGG 2 cut(s) 1001, 1033
Bst4CI ACNGT 3 cut(s) 685, 1871, 2611
Bst6I CTCTTC 3 cut(s) 1238, 2205, 2694
BstACI GRCGYC 2 cut(s) 328, 2380
BstAFI CTTAAG 1 cut(s) 1777
BstAPI GCANNNNNTGC 4 cut(s) 11, 959, 1191, 2186
BstBAI YACGTR 2 cut(s) 292, 1928
BstBI TTCGAA 1 cut(s) 2203
BstC8I GCNNGC 5 cut(s) 976, 1451, 1524, 1594, 2257
BstDEI CTNAG 5 cut(s) 144, 627, 1259, 1760, 2453
BstENI CCTNNNNNAGG 1 cut(s) 1004
BstFNI CGCG 1 cut(s) 84
BstHHI GCGC 2 cut(s) 468, 1920
BstKTI GATC 8 cut(s) 22, 448, 605, 633, 729, 1225, 1860, 2656
BstMBI GATC 8 cut(s) 19, 445, 602, 630, 726, 1222, 1857, 2653
BstMWI GCNNNNNNNGC 7 cut(s) 11, 371, 959, 1136, 1191, 1589, 2186
BstNI CCWGG 2 cut(s) 1001, 1033
BstNSI RCATGY 3 cut(s) 1388, 1453, 2545
BstSCI CCNGG 2 cut(s) 999, 1031
BstSFI CTRYAG 2 cut(s) 2490, 2649
BstSNI TACGTA 1 cut(s) 1928
BstUI CGCG 1 cut(s) 84
BstV1I GCAGC 3 cut(s) 2164, 2525, 2635
BstV2I GAAGAC 2 cut(s) 278, 714
BstX2I RGATCY 3 cut(s) 19, 602, 630
BstXI CCANNNNNNTGG 1 cut(s) 346
BstYI RGATCY 3 cut(s) 19, 602, 630
BsuRI GGCC 3 cut(s) 1119, 1486, 2259
BtsI GCAGTG 1 cut(s) 2363
BtsIMutI CAGTG 4 cut(s) 1876, 1941, 2363, 2561
BtuMI TCGCGA 1 cut(s) 84
BveI ACCTGC 1 cut(s) 2050
Cac8I GCNNGC 5 cut(s) 976, 1451, 1524, 1594, 2257
CciI TCATGA 1 cut(s) 442
CfoI GCGC 2 cut(s) 468, 1920
Cfr10I RCCGGY 1 cut(s) 74
CseI GACGC 2 cut(s) 317, 2131
Csp6I GTAC 6 cut(s) 435, 926, 1765, 1985, 2273, 2348
CspCI CAANNNNNGTGG 2 cut(s) 604, 639
CviQI GTAC 6 cut(s) 435, 926, 1765, 1985, 2273, 2348
DdeI CTNAG 5 cut(s) 144, 627, 1259, 1760, 2453
DpnI GATC 8 cut(s) 21, 447, 604, 632, 728, 1224, 1859, 2655
DpnII GATC 8 cut(s) 19, 445, 602, 630, 726, 1222, 1857, 2653
DraI TTTAAA 1 cut(s) 1788
EaeI YGGCCR 1 cut(s) 2257
Eam1104I CTCTTC 3 cut(s) 1238, 2205, 2694
EarI CTCTTC 3 cut(s) 1238, 2205, 2694
Eco105I TACGTA 1 cut(s) 1928
Eco31I GGTCTC 2 cut(s) 1154, 2331
Eco32I GATATC 1 cut(s) 1807
Eco57I CTGAAG 2 cut(s) 772, 1635
Eco88I CYCGRG 1 cut(s) 1092
EcoNI CCTNNNNNAGG 1 cut(s) 1004
EcoRI GAATTC 2 cut(s) 233, 2573
EcoRII CCWGG 2 cut(s) 999, 1031
EcoRV GATATC 1 cut(s) 1807
EcoT22I ATGCAT 3 cut(s) 676, 1506, 2401
Esp3I CGTCTC 1 cut(s) 2114
FalI AAGNNNNNCTT 2 cut(s) 492, 524
FaqI GGGAC 5 cut(s) 875, 1918, 1990, 2391, 2620
FauI CCCGC 1 cut(s) 1601
FauNDI CATATG 2 cut(s) 397, 2401
FbaI TGATCA 3 cut(s) 445, 726, 1857
Fnu4HI GCNGC 4 cut(s) 12, 2153, 2539, 2649
Fsp4HI GCNGC 4 cut(s) 12, 2153, 2539, 2649
FspBI CTAG 5 cut(s) 422, 839, 1718, 2603, 2734
FspI TGCGCA 1 cut(s) 467
GlaI GCGC 2 cut(s) 467, 1919
GluI GCNGC 4 cut(s) 12, 2153, 2539, 2649
GsuI CTGGAG 2 cut(s) 2279, 2285
HaeIII GGCC 3 cut(s) 1119, 1486, 2259
HapII CCGG 3 cut(s) 75, 1403, 1751
HgaI GACGC 2 cut(s) 317, 2131
HhaI GCGC 2 cut(s) 468, 1920
Hin1I GRCGYC 2 cut(s) 328, 2380
Hin6I GCGC 2 cut(s) 466, 1918
HinP1I GCGC 2 cut(s) 466, 1918
HincII GTYRAC 2 cut(s) 2478, 2598
HindII GTYRAC 2 cut(s) 2478, 2598
HindIII AAGCTT 1 cut(s) 721
HinfI GANTC 9 cut(s) 200, 313, 388, 805, 1347, 1374, 1471, 2197, 2702
HpaII CCGG 3 cut(s) 75, 1403, 1751
HphI GGTGA 3 cut(s) 922, 2214, 2515
Hpy166II GTNNAC 6 cut(s) 814, 985, 1070, 2222, 2478, 2598
Hpy188I TCNGA 8 cut(s) 382, 393, 791, 939, 1540, 1615, 1696, 2640
Hpy8I GTNNAC 6 cut(s) 814, 985, 1070, 2222, 2478, 2598
Hpy99I CGWCG 1 cut(s) 2120
HpyCH4III ACNGT 3 cut(s) 685, 1871, 2611
HpyCH4IV ACGT 4 cut(s) 291, 1685, 1927, 2380
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 371, 959, 1136, 1191, 1589, 2186
HpyF3I CTNAG 5 cut(s) 144, 627, 1259, 1760, 2453
HpySE526I ACGT 4 cut(s) 291, 1685, 1927, 2380
Hsp92I GRCGYC 2 cut(s) 328, 2380
HspAI GCGC 2 cut(s) 466, 1918
KpnI GGTACC 1 cut(s) 2351
Ksp22I TGATCA 3 cut(s) 445, 726, 1857
Kzo9I GATC 8 cut(s) 19, 445, 602, 630, 726, 1222, 1857, 2653
LguI GCTCTTC 1 cut(s) 1238
LmnI GCTCC 6 cut(s) 362, 1021, 1182, 1813, 2160, 2645
Lsp1109I GCAGC 3 cut(s) 2164, 2525, 2635
LweI GCATC 9 cut(s) 14, 71, 130, 255, 453, 1219, 1491, 2176, 2496
MaeI CTAG 5 cut(s) 422, 839, 1718, 2603, 2734
MaeII ACGT 4 cut(s) 291, 1685, 1927, 2380
MaeIII GTNAC 7 cut(s) 292, 412, 679, 876, 1396, 1937, 2132
MalI GATC 8 cut(s) 21, 447, 604, 632, 728, 1224, 1859, 2655
MboI GATC 8 cut(s) 19, 445, 602, 630, 726, 1222, 1857, 2653
MfeI CAATTG 3 cut(s) 664, 1131, 1584
MflI RGATCY 3 cut(s) 19, 602, 630
MlyI GAGTC 4 cut(s) 194, 1341, 2191, 2711
Mph1103I ATGCAT 3 cut(s) 676, 1506, 2401
MroXI GAANNNNTTC 2 cut(s) 128, 1040
MslI CAYNNNNRTG 2 cut(s) 776, 2130
MspA1I CMGCKG 2 cut(s) 11, 2416
MspCI CTTAAG 1 cut(s) 1777
MspI CCGG 3 cut(s) 75, 1403, 1751
MspR9I CCNGG 2 cut(s) 1001, 1033
MunI CAATTG 3 cut(s) 664, 1131, 1584
Mva1269I GAATGC 2 cut(s) 1040, 2139
MvaI CCWGG 2 cut(s) 1001, 1033
MvnI CGCG 1 cut(s) 84
MwoI GCNNNNNNNGC 7 cut(s) 11, 371, 959, 1136, 1191, 1589, 2186
NdeI CATATG 2 cut(s) 397, 2401
NdeII GATC 8 cut(s) 19, 445, 602, 630, 726, 1222, 1857, 2653
NlaIV GGNNCC 4 cut(s) 364, 762, 2349, 2613
NmeAIII GCCGAG 1 cut(s) 2453
NmuCI GTSAC 3 cut(s) 876, 1396, 2132
NruI TCGCGA 1 cut(s) 84
NsbI TGCGCA 1 cut(s) 467
NsiI ATGCAT 3 cut(s) 676, 1506, 2401
NspI RCATGY 3 cut(s) 1388, 1453, 2545
NspV TTCGAA 1 cut(s) 2203
OliI CACNNNNGTG 1 cut(s) 2130
PaeI GCATGC 1 cut(s) 1453
PagI TCATGA 1 cut(s) 442
PasI CCCWGGG 1 cut(s) 1000
PciI ACATGT 1 cut(s) 1384
PciSI GCTCTTC 1 cut(s) 1238
PcsI WCGNNNNNNNCGW 1 cut(s) 1933
PctI GAATGC 2 cut(s) 1040, 2139
PdmI GAANNNNTTC 2 cut(s) 128, 1040
PfeI GAWTC 5 cut(s) 313, 388, 805, 1374, 1471
PflFI GACNNNGTC 1 cut(s) 203
PfoI TCCNGGA 1 cut(s) 1031
PkrI GCNGC 4 cut(s) 13, 2154, 2540, 2650
PleI GAGTC 4 cut(s) 194, 1341, 2191, 2710
PpsI GAGTC 4 cut(s) 194, 1341, 2191, 2710
Ppu21I YACGTR 2 cut(s) 292, 1928
PscI ACATGT 1 cut(s) 1384
PshBI ATTAAT 2 cut(s) 539, 2394
Psp1406I AACGTT 1 cut(s) 1685
Psp6I CCWGG 2 cut(s) 999, 1031
PspGI CCWGG 2 cut(s) 999, 1031
PspN4I GGNNCC 4 cut(s) 364, 762, 2349, 2613
PstI CTGCAG 1 cut(s) 2653
PsuI RGATCY 3 cut(s) 19, 602, 630
PsyI GACNNNGTC 1 cut(s) 203
PvuII CAGCTG 2 cut(s) 11, 2416
RruI TCGCGA 1 cut(s) 84
RsaI GTAC 6 cut(s) 436, 927, 1766, 1986, 2274, 2349
RsaNI GTAC 6 cut(s) 435, 926, 1765, 1985, 2273, 2348
RseI CAYNNNNRTG 2 cut(s) 776, 2130
SapI GCTCTTC 1 cut(s) 1238
SatI GCNGC 4 cut(s) 12, 2153, 2539, 2649
Sau3AI GATC 8 cut(s) 19, 445, 602, 630, 726, 1222, 1857, 2653
ScaI AGTACT 1 cut(s) 436
SchI GAGTC 4 cut(s) 194, 1341, 2191, 2711
ScrFI CCNGG 2 cut(s) 1001, 1033
SfaNI GCATC 9 cut(s) 14, 71, 130, 255, 453, 1219, 1491, 2176, 2496
SfcI CTRYAG 2 cut(s) 2490, 2649
SfuI TTCGAA 1 cut(s) 2203
SmiI ATTTAAAT 1 cut(s) 1788
SmiMI CAYNNNNRTG 2 cut(s) 776, 2130
SmlI CTYRAG 4 cut(s) 50, 1079, 1777, 2516
SmoI CTYRAG 4 cut(s) 50, 1079, 1777, 2516
SnaBI TACGTA 1 cut(s) 1928
SphI GCATGC 1 cut(s) 1453
SsiI CCGC 3 cut(s) 264, 1594, 1864
SspI AATATT 1 cut(s) 991
SspMI CTAG 5 cut(s) 422, 839, 1718, 2603, 2734
StyD4I CCNGG 2 cut(s) 999, 1031
SwaI ATTTAAAT 1 cut(s) 1788
TaaI ACNGT 3 cut(s) 685, 1871, 2611
TaiI ACGT 4 cut(s) 294, 1688, 1930, 2383
TaqI TCGA 3 cut(s) 919, 2203, 2718
TaqII GACCGA 1 cut(s) 1644
TatI WGTACW 2 cut(s) 434, 925
TfiI GAWTC 5 cut(s) 313, 388, 805, 1374, 1471
TscAI CASTG 4 cut(s) 1876, 1948, 2370, 2568
TseFI GTSAC 3 cut(s) 876, 1396, 2132
TseI GCWGC 4 cut(s) 11, 2152, 2538, 2648
Tsp45I GTSAC 3 cut(s) 876, 1396, 2132
TspGWI ACGGA 2 cut(s) 574, 1817
TspRI CASTG 4 cut(s) 1876, 1948, 2370, 2568
Tth111I GACNNNGTC 1 cut(s) 203
Vha464I CTTAAG 1 cut(s) 1777
VspI ATTAAT 2 cut(s) 539, 2394
XagI CCTNNNNNAGG 1 cut(s) 1004
XapI RAATTY 4 cut(s) 233, 1703, 1789, 2573
XbaI TCTAGA 1 cut(s) 421
XceI RCATGY 3 cut(s) 1388, 1453, 2545
XcmI CCANNNNNNNNNTGG 1 cut(s) 315
XmnI GAANNNNTTC 2 cut(s) 128, 1040
XspI CTAG 5 cut(s) 422, 839, 1718, 2603, 2734
ZraI GACGTC 1 cut(s) 2381
ZrmI AGTACT 1 cut(s) 436
Zsp2I ATGCAT 3 cut(s) 676, 1506, 2401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.