Rmu_sc0006594.1_g000011

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006594.1
OG0000110
Physical Location & Seq
Reverse (-)
45904 .. 48079
2176 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006594.1_g000011.1.cds

Sequence Viewer

Length: 1896 bp
atggcctcatctgtaacggatcttttaattggaaaacttgcgacaattcttgagaacgaaggaacaaccatagccggtgttcgtgatgaagttgaaaagattaaggcggagtttctaagcatgaaagctttcatagtggatgcaaagtccaacaaagcaaaaactgaaggagagaaattatgggtcgcaagcatcagagacttggcctatgatgtcgaagatatcattgatgaattcatgtatcacatgtatgagaagcaaagtgggggtggactttcaagggggctacacaaaaccattcgcgctccaagtagtctttggttcaggcataaaattgcaaagaagttgaagaaaattactgaaatgatcaaagccattccagagaggaatcaaagatacaatgttcgccttgtaggaggagcaactacatctgaagatattcataacttggtgcagaaccaagcagagtcttcatttttcattatggaagacgaattggttggaattgaaggcaagaagcaaatattaatgggatggctcatggatgaagagcaacaccaaactgttatatctgtggttggcatgggaggttctggaaagacaactctagctgccaagatcttctacaatgaaagggtgaagagacatttcgattgttatgcaaggattaccgtttcccaaacttacgatgtggtacacttgtttcaaagcttaatcagggaactctacaaatcaaggaaggaagatttccctgcaactttgaatgccatgagccgcatagaattgctagagttactagtatcacttcaagataggcaactcggaagtcgaatcatagttacaactcggaaagaagatgtagcatccaattcatttggagttaaaagccatgttcaccatattcaaccactgctaaagaatgaggcttgggagctcttctgcaaaatagcattctcatctaataagcacaaaacttgtccacctgattctgtgtcattaacttgccactttgtggaaaagtgcggaggccttcctctggctattgtggctttaggtggtcttatgtcttccaagaagtcactggatcaatggcagcaagtctgcaacagcttgaattggcatctagataacaatccattgctagaccctatgaaaaacattttggtgctgagtttcaatgatttgccatctcaattgaaacattgcttcctctattgttctcttttcccagaagatttttcacttaagagaaaaaggctcattagattgtggatagcagaaggcttcattggaaatgtgaaagggatcacgcccgaacaagttgcaaatggctatctttgggaactctgcctccgtagcatgttacaagttgttgagagaaatgaaacaggaaggccgaaaaaagttaagatgcatgatcttatgcgaaagcttgctctgtcgacgtccaaaaaagcaaagttttctcatgtatatgatgggggagaagtgatggaagacatttcaacccgtcgcttgtcaattcacactacaagaagtgaattaaatcaagcacaggaactgccagagtccatagggtgtctccgcaaccttcaatttctgaacatcacggatactaagatagagtcacttccacaaggaattacaaagttgctaaacctgcgccatctaattatgtatagctacactaaaatcatggggttattcaatcgtataagtgggacaagagcgccgtcaaacatgtgtaagctggagaaattgcaatttttagcactgattgaatcagaaggagacactgttagacttattggcaacctgattcaacttacgagcatcggcatctcgaatgtcaaagagagagatgagatagacctttgggtctcaattgaaaagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

631

Amino Acids

71.66

Weight (kDa)

8.86

Isoelectric Point (pI)

48.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1877
AatII GACGTC 1 cut(s) 1448
Acc36I ACCTGC 1 cut(s) 1668
AccB7I CCANNNNNTGG 1 cut(s) 1012
AccI GTMKAC 1 cut(s) 1442
AccII CGCG 1 cut(s) 303
AciI CCGC 4 cut(s) 107, 775, 1023, 1585
AclWI GGATC 3 cut(s) 27, 1092, 1313
AcsI RAATTY 1 cut(s) 233
AcuI CTGAAG 2 cut(s) 186, 453
AcyI GRCGYC 1 cut(s) 1445
AdeI CACNNNGTG 1 cut(s) 1012
AfaI GTAC 1 cut(s) 696
AfiI CCNNNNNNNGG 2 cut(s) 1012, 1036
AflII CTTAAG 1 cut(s) 1244
AflIII ACRYGT 2 cut(s) 246, 1740
AhlI ACTAGT 1 cut(s) 796
AjuI GAANNNNNNNTTGG 4 cut(s) 1145, 1177, 1272, 1304
AloI GAACNNNNNNTCC 2 cut(s) 1335, 1367
AluBI AGCT 8 cut(s) 128, 611, 711, 934, 1110, 1432, 1683, 1750
AluI AGCT 8 cut(s) 128, 611, 711, 934, 1110, 1432, 1683, 1750
Alw21I GWGCWC 1 cut(s) 936
Alw26I GTCTC 5 cut(s) 192, 637, 1586, 1785, 1885
AlwI GGATC 3 cut(s) 27, 1092, 1313
AlwNI CAGNNNCTG 1 cut(s) 1561
AoxI GGCC 4 cut(s) 3, 204, 1027, 1394
ApeKI GCWGC 2 cut(s) 611, 1093
ApoI RAATTY 1 cut(s) 233
AseI ATTAAT 1 cut(s) 527
Asp700I GAANNNNTTC 2 cut(s) 128, 438
AspLEI GCGC 3 cut(s) 305, 1665, 1732
AsuHPI GGTGA 2 cut(s) 649, 887
BaeI ACNNNNGTAYC 2 cut(s) 686, 719
BanII GRGCYC 1 cut(s) 936
BbsI GAAGAC 4 cut(s) 462, 495, 1059, 1503
Bbv12I GWGCWC 1 cut(s) 936
BbvI GCAGC 2 cut(s) 598, 1105
BccI CCATC 5 cut(s) 528, 1195, 1472, 1486, 1674
BceAI ACGGC 1 cut(s) 1717
BcgI CGANNNNNNTGC 4 cut(s) 641, 675, 1304, 1338
BciVI GTATCC 1 cut(s) 1606
BclI TGATCA 1 cut(s) 366
BcoDI GTCTC 5 cut(s) 192, 637, 1586, 1785, 1885
BcuI ACTAGT 1 cut(s) 796
BfaI CTAG 5 cut(s) 608, 788, 797, 1124, 1142
BfoI RGCGCY 1 cut(s) 1733
BfrI CTTAAG 1 cut(s) 1244
BfuAI ACCTGC 1 cut(s) 1668
BfuI GTATCC 1 cut(s) 1606
BglII AGATCT 1 cut(s) 618
BisI GCNGC 3 cut(s) 612, 775, 1094
BlsI GCNGC 3 cut(s) 613, 776, 1095
BmsI GCATC 7 cut(s) 130, 201, 872, 1129, 1401, 1842, 1848
BpiI GAAGAC 4 cut(s) 462, 495, 1059, 1503
BpmI CTGGAG 1 cut(s) 1772
BpuEI CTTGAG 1 cut(s) 71
BsaBI GATNNNNATC 1 cut(s) 1131
BsaHI GRCGYC 1 cut(s) 1445
BsaI GGTCTC 1 cut(s) 1885
BsaXI ACNNNNNCTCC 4 cut(s) 1335, 1365, 1782, 1812
Bsc4I CCNNNNNNNGG 2 cut(s) 1012, 1036
Bse118I RCCGGY 1 cut(s) 74
Bse1I ACTGG 1 cut(s) 1086
Bse3DI GCAATG 2 cut(s) 1136, 1201
Bse8I GATNNNNATC 1 cut(s) 1131
BseGI GGATG 4 cut(s) 145, 539, 550, 863
BseJI GATNNNNATC 1 cut(s) 1131
BseLI CCNNNNNNNGG 2 cut(s) 1012, 1036
BseMI GCAATG 2 cut(s) 1136, 1201
BseMII CTCAG 1 cut(s) 1160
BseNI ACTGG 1 cut(s) 1086
BseRI GAGGAG 1 cut(s) 432
BseXI GCAGC 2 cut(s) 598, 1105
BsgI GTGCAG 1 cut(s) 473
Bsh1236I CGCG 1 cut(s) 303
BshFI GGCC 4 cut(s) 5, 206, 1029, 1396
BsiHKAI GWGCWC 1 cut(s) 936
BsiSI CCGG 1 cut(s) 75
BslFI GGGAC 1 cut(s) 1735
BslI CCNNNNNNNGG 2 cut(s) 1012, 1036
BsmAI GTCTC 5 cut(s) 192, 637, 1586, 1785, 1885
BsmFI GGGAC 1 cut(s) 1735
BsmI GAATGC 2 cut(s) 769, 950
BsnI GGCC 4 cut(s) 5, 206, 1029, 1396
Bso31I GGTCTC 1 cut(s) 1885
Bsp1286I GDGCHC 1 cut(s) 936
Bsp143I GATC 6 cut(s) 19, 366, 618, 1084, 1305, 1417
BspACI CCGC 4 cut(s) 107, 775, 1023, 1585
BspANI GGCC 4 cut(s) 5, 206, 1029, 1396
BspCNI CTCAG 1 cut(s) 1161
BspFNI CGCG 1 cut(s) 303
BspMI ACCTGC 1 cut(s) 1668
BspPI GGATC 3 cut(s) 27, 1092, 1313
BspQI GCTCTTC 2 cut(s) 543, 941
BspTI CTTAAG 1 cut(s) 1244
BspTNI GGTCTC 1 cut(s) 1885
BsrDI GCAATG 2 cut(s) 1136, 1201
BsrFI RCCGGY 1 cut(s) 74
BsrI ACTGG 1 cut(s) 1086
BssAI RCCGGY 1 cut(s) 74
BssMI GATC 6 cut(s) 19, 366, 618, 1084, 1305, 1417
BssNI GRCGYC 1 cut(s) 1445
Bst4CI ACNGT 3 cut(s) 565, 673, 1798
Bst6I CTCTTC 3 cut(s) 543, 635, 941
BstACI GRCGYC 1 cut(s) 1445
BstAFI CTTAAG 1 cut(s) 1244
BstC8I GCNNGC 2 cut(s) 190, 1434
BstDEI CTNAG 3 cut(s) 116, 1169, 1617
BstF5I GGATG 4 cut(s) 145, 539, 550, 863
BstFNI CGCG 1 cut(s) 303
BstH2I RGCGCY 1 cut(s) 1733
BstHHI GCGC 3 cut(s) 305, 1665, 1732
BstKTI GATC 6 cut(s) 22, 369, 621, 1087, 1308, 1420
BstMAI GTCTC 5 cut(s) 192, 637, 1586, 1785, 1885
BstMBI GATC 6 cut(s) 19, 366, 618, 1084, 1305, 1417
BstMWI GCNNNNNNNGC 3 cut(s) 1046, 1356, 1660
BstNSI RCATGY 3 cut(s) 250, 1363, 1744
BstUI CGCG 1 cut(s) 303
BstV1I GCAGC 2 cut(s) 598, 1105
BstV2I GAAGAC 4 cut(s) 462, 495, 1059, 1503
BstX2I RGATCY 2 cut(s) 19, 618
BstYI RGATCY 2 cut(s) 19, 618
BsuI GTATCC 1 cut(s) 1606
BsuRI GGCC 4 cut(s) 5, 206, 1029, 1396
BtsCI GGATG 4 cut(s) 145, 539, 550, 863
BtsI GCAGTG 1 cut(s) 908
BtsIMutI CAGTG 4 cut(s) 908, 1079, 1772, 1794
BveI ACCTGC 1 cut(s) 1668
Cac8I GCNNGC 2 cut(s) 190, 1434
CaiI CAGNNNCTG 1 cut(s) 1561
CfoI GCGC 3 cut(s) 305, 1665, 1732
Cfr10I RCCGGY 1 cut(s) 74
Csp6I GTAC 1 cut(s) 695
CviQI GTAC 1 cut(s) 695
DdeI CTNAG 3 cut(s) 116, 1169, 1617
DpnI GATC 6 cut(s) 21, 368, 620, 1086, 1307, 1419
DpnII GATC 6 cut(s) 19, 366, 618, 1084, 1305, 1417
DraIII CACNNNGTG 1 cut(s) 1012
DrdI GACNNNNNNGTC 1 cut(s) 1877
DseDI GACNNNNNNGTC 1 cut(s) 1877
Eam1104I CTCTTC 3 cut(s) 543, 635, 941
EarI CTCTTC 3 cut(s) 543, 635, 941
EciI GGCGGA 1 cut(s) 122
Ecl136II GAGCTC 1 cut(s) 934
Eco147I AGGCCT 1 cut(s) 1029
Eco24I GRGCYC 1 cut(s) 936
Eco31I GGTCTC 1 cut(s) 1885
Eco32I GATATC 1 cut(s) 223
Eco53kI GAGCTC 1 cut(s) 934
Eco57I CTGAAG 2 cut(s) 186, 453
EcoICRI GAGCTC 1 cut(s) 934
EcoRI GAATTC 1 cut(s) 233
EcoRV GATATC 1 cut(s) 223
EcoT22I ATGCAT 1 cut(s) 1416
EcoT38I GRGCYC 1 cut(s) 936
FaqI GGGAC 1 cut(s) 1735
FbaI TGATCA 1 cut(s) 366
FblI GTMKAC 1 cut(s) 1442
Fnu4HI GCNGC 3 cut(s) 612, 775, 1094
FokI GGATG 4 cut(s) 152, 546, 557, 850
FriOI GRGCYC 1 cut(s) 936
Fsp4HI GCNGC 3 cut(s) 612, 775, 1094
FspBI CTAG 5 cut(s) 608, 788, 797, 1124, 1142
GlaI GCGC 3 cut(s) 304, 1664, 1731
GluI GCNGC 3 cut(s) 612, 775, 1094
GsuI CTGGAG 1 cut(s) 1772
HaeII RGCGCY 1 cut(s) 1733
HaeIII GGCC 4 cut(s) 5, 206, 1029, 1396
HapII CCGG 1 cut(s) 75
HhaI GCGC 3 cut(s) 305, 1665, 1732
Hin1I GRCGYC 1 cut(s) 1445
Hin6I GCGC 3 cut(s) 303, 1663, 1730
HinP1I GCGC 3 cut(s) 303, 1663, 1730
HincII GTYRAC 1 cut(s) 1443
HindII GTYRAC 1 cut(s) 1443
HindIII AAGCTT 3 cut(s) 126, 709, 1430
HinfI GANTC 8 cut(s) 388, 467, 831, 986, 1568, 1625, 1781, 1819
HpaII CCGG 1 cut(s) 75
HphI GGTGA 2 cut(s) 649, 887
Hpy166II GTNNAC 5 cut(s) 272, 697, 895, 980, 1443
Hpy188I TCNGA 6 cut(s) 197, 433, 824, 849, 1602, 1786
Hpy188III TCNNGA 7 cut(s) 50, 83, 380, 594, 809, 1124, 1843
Hpy8I GTNNAC 5 cut(s) 272, 697, 895, 980, 1443
Hpy99I CGWCG 2 cut(s) 1447, 1515
HpyAV CCTTC 9 cut(s) 53, 161, 503, 733, 1040, 1274, 1386, 1601, 1781
HpyCH4III ACNGT 3 cut(s) 565, 673, 1798
HpyCH4IV ACGT 1 cut(s) 1445
HpyF10VI GCNNNNNNNGC 3 cut(s) 1046, 1356, 1660
HpyF3I CTNAG 3 cut(s) 116, 1169, 1617
HpySE526I ACGT 1 cut(s) 1445
Hsp92I GRCGYC 1 cut(s) 1445
HspAI GCGC 3 cut(s) 303, 1663, 1730
Ksp22I TGATCA 1 cut(s) 366
Kzo9I GATC 6 cut(s) 19, 366, 618, 1084, 1305, 1417
LguI GCTCTTC 2 cut(s) 543, 941
LmnI GCTCC 3 cut(s) 310, 419, 931
Lsp1109I GCAGC 2 cut(s) 598, 1105
LweI GCATC 7 cut(s) 130, 201, 872, 1129, 1401, 1842, 1848
MaeI CTAG 5 cut(s) 608, 788, 797, 1124, 1142
MaeII ACGT 1 cut(s) 1445
MaeIII GTNAC 6 cut(s) 13, 792, 838, 1077, 1362, 1626
MalI GATC 6 cut(s) 21, 368, 620, 1086, 1307, 1419
MboI GATC 6 cut(s) 19, 366, 618, 1084, 1305, 1417
MfeI CAATTG 2 cut(s) 1193, 1884
MflI RGATCY 2 cut(s) 19, 618
MhlI GDGCHC 1 cut(s) 936
MlyI GAGTC 3 cut(s) 476, 1577, 1634
MmeI TCCRAC 2 cut(s) 174, 481
MnlI CCTC 9 cut(s) 16, 378, 410, 581, 916, 1019, 1044, 1220, 1361
Mph1103I ATGCAT 1 cut(s) 1416
MroXI GAANNNNTTC 2 cut(s) 128, 438
MseI TTAA 9 cut(s) 26, 102, 527, 713, 882, 998, 1245, 1407, 1544
MslI CAYNNNNRTG 3 cut(s) 249, 1163, 1473
MspCI CTTAAG 1 cut(s) 1244
MspI CCGG 1 cut(s) 75
MunI CAATTG 2 cut(s) 1193, 1884
Mva1269I GAATGC 2 cut(s) 769, 950
MvnI CGCG 1 cut(s) 303
MwoI GCNNNNNNNGC 3 cut(s) 1046, 1356, 1660
NdeII GATC 6 cut(s) 19, 366, 618, 1084, 1305, 1417
NmuCI GTSAC 2 cut(s) 1077, 1626
NsiI ATGCAT 1 cut(s) 1416
NspI RCATGY 3 cut(s) 250, 1363, 1744
PceI AGGCCT 1 cut(s) 1029
PciI ACATGT 2 cut(s) 246, 1740
PciSI GCTCTTC 2 cut(s) 543, 941
PctI GAATGC 2 cut(s) 769, 950
PdmI GAANNNNTTC 2 cut(s) 128, 438
PfeI GAWTC 5 cut(s) 388, 831, 986, 1781, 1819
PflMI CCANNNNNTGG 1 cut(s) 1012
PkrI GCNGC 3 cut(s) 613, 776, 1095
PleI GAGTC 3 cut(s) 475, 1576, 1633
PpsI GAGTC 3 cut(s) 475, 1576, 1633
PscI ACATGT 2 cut(s) 246, 1740
PshBI ATTAAT 1 cut(s) 527
Psp124BI GAGCTC 1 cut(s) 936
PstNI CAGNNNCTG 1 cut(s) 1561
PsuI RGATCY 2 cut(s) 19, 618
RsaI GTAC 1 cut(s) 696
RsaNI GTAC 1 cut(s) 695
RseI CAYNNNNRTG 3 cut(s) 249, 1163, 1473
SacI GAGCTC 1 cut(s) 936
SalI GTCGAC 1 cut(s) 1441
SapI GCTCTTC 2 cut(s) 543, 941
SaqAI TTAA 9 cut(s) 26, 102, 527, 713, 882, 998, 1245, 1407, 1544
SatI GCNGC 3 cut(s) 612, 775, 1094
Sau3AI GATC 6 cut(s) 19, 366, 618, 1084, 1305, 1417
SchI GAGTC 3 cut(s) 476, 1577, 1634
SduI GDGCHC 1 cut(s) 936
SfaNI GCATC 7 cut(s) 130, 201, 872, 1129, 1401, 1842, 1848
SmiMI CAYNNNNRTG 3 cut(s) 249, 1163, 1473
SmlI CTYRAG 2 cut(s) 50, 1244
SmoI CTYRAG 2 cut(s) 50, 1244
SpeI ACTAGT 1 cut(s) 796
SseBI AGGCCT 1 cut(s) 1029
SsiI CCGC 4 cut(s) 107, 775, 1023, 1585
SspI AATATT 1 cut(s) 525
SspMI CTAG 5 cut(s) 608, 788, 797, 1124, 1142
SstI GAGCTC 1 cut(s) 936
StuI AGGCCT 1 cut(s) 1029
TaaI ACNGT 3 cut(s) 565, 673, 1798
TaiI ACGT 1 cut(s) 1448
TaqI TCGA 5 cut(s) 216, 651, 829, 1442, 1844
TauI GCSGC 1 cut(s) 777
TfiI GAWTC 5 cut(s) 388, 831, 986, 1781, 1819
Tru1I TTAA 9 cut(s) 26, 102, 527, 713, 882, 998, 1245, 1407, 1544
Tru9I TTAA 9 cut(s) 26, 102, 527, 713, 882, 998, 1245, 1407, 1544
TscAI CASTG 4 cut(s) 915, 1086, 1779, 1801
TseFI GTSAC 2 cut(s) 1077, 1626
TseI GCWGC 2 cut(s) 611, 1093
Tsp45I GTSAC 2 cut(s) 1077, 1626
TspGWI ACGGA 3 cut(s) 32, 1343, 1625
TspRI CASTG 4 cut(s) 915, 1086, 1779, 1801
Van91I CCANNNNNTGG 1 cut(s) 1012
Vha464I CTTAAG 1 cut(s) 1244
VspI ATTAAT 1 cut(s) 527
XapI RAATTY 1 cut(s) 233
XbaI TCTAGA 1 cut(s) 1123
XceI RCATGY 3 cut(s) 250, 1363, 1744
XcmI CCANNNNNNNNNTGG 2 cut(s) 315, 1078
XmiI GTMKAC 1 cut(s) 1442
XmnI GAANNNNTTC 2 cut(s) 128, 438
XspI CTAG 5 cut(s) 608, 788, 797, 1124, 1142
ZraI GACGTC 1 cut(s) 1446
Zsp2I ATGCAT 1 cut(s) 1416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.