RLG00000019460

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
52255044 .. 52257779
2736 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019460

Sequence Viewer

Length: 2736 bp
ATGGCGTTAGCGGCCCAAGATCTCTTGCTTGGCAAAATTGTAGCCATTCTTGAGAACGAAGTATCCTCCATAGCCAGTGTTCACGATAAAGTTGATGACATTAAAAAAGAGCTTGTAAGCATGAAAGCCTTCCTAGAGGATGTTGAGGGAAAGAAAGCACAATCGGAGGGAGGGGAGACATGGATAACGAGCGTGAGAGACTCTGTCTATGACGTTGAAGATATCATTGATGAATTCACATATCGAATCTATAAGCAGGGACGTGGAGTTCGAGTTGCAAGGTGTCTTCACCAAGCATTTTATATTCCGAAGAATTTTTGGTATAGGCATCAAATTGCTAAAAAATTAGACAAAATCAAAGGAACCATTAAAGCCATTTCAGAGAGGAATCAGACATATGGTGTTAGTGTTGTTACTGCTCTAGAAGGAACGAGTACTTCTCATGATCATATTCAAAAATGGATGCGGAACCGAGCAGAGGCTTCTCTCTTTACCAATGAAGATGAGCTTGTCGGGATTGAAGCCCCCAAAGGAGTATTAATGGAACATATAGTGAATGGACTGCAAAGCCAAAGCATAGTCTCTGTGGTTGGGATGGGAGGATCTGGGAAGACCACTCTTGTTGCAACGATCTTTAACAATGACATTGTAAAGAGACATTTCAATTGCTATGCATGGGTTACAGTTACCCAAACTTATGTGATTGAAGACTTATTTAGAAGCTTGATCAAGCAATTCCATGAAGCAAGGAAGGAGGAGGTTCCAAGAGACATTGAAATGAGGAGCTTTAGAGAATTGGTAGAGATTCTTGTGAACTACTTGAACTCGAAAAAGTATCTAGTTGTGCTGGATGATGTATGGGATATAAATCTTTGGGCACATATGAGGGTATCACTTCAAGATAGACAACTTGGAAGTCGAGTTGTACTCACCACTCGAAAGGATGATATAGCAAGCTATGCTTTTGGAGTTGCAAGCCATGTTCACCATATTCAACCCCTGGGAAAGAAGAACACTTGGGAGCTTTTTTGCAAGGAGACATTCTCTACTCATCCTAATAAATCTTGTCCACTTGAACTTGAGCCATTTGCACGGGAACTTGTGGGGAAGTGTAATGGCCTTCCTCTAGCAATTGTAGCATTAGGTGGTCTCATGTCATCCAAAAAGTCATGTTCAGAGTGGACCAATGTATGCAACAGCTTAAATTGGCATCTTAGAAACGACCCTTTACTGGGCTCTATGCAGAGCATTTTATTGCTCAGTTTCAATGACTTGTCGTATCGATTGAAGCATTGTTTCTTATACTGTTCTCTTTTTCCAGAAGACTATTTAATGAGAAGAAAACGACTCATTAGATTGTGGATAGCTGAAGGATTCATTGAACATGTGAAAGGTGTCACACTGGAAGTGATTGCAGATAGATATCTTTCGGAACTTTGTTTTCGTAGCATGCTACAAGTTGTGGAGAGGAATGAAGAAGGAAGACCAAAACAATGCAGGATGCATGATGTCATGCGTGAGCTTGCTCTTTCAACATCTGAGAAAGAAAAGTTTTGTGCTGTGTATGATGGGAAAGATGAAGCAATTGAAGCCCGCCGTTTGTCAGTTCAATTTGAAGGAGAAATTAAATCCAGCACAGGCATATCACAGCTTCGATCTATTCTTGTCTTTGTCAAAGAGACTACGTTGCCTTCTAATTGCAAATTTTTGAGGGTGCTAGACTTGGAGAATGTGTCAATAACTAAACTGCCAGATGATCTTGGGTACTTGTTCAACTTAAGATATTTAAATTTGAGGAGAACTCGTATCAAGGAGCTTCCAAAATCCATAGGAAAGCTACGCAACCTTCAAACCTTGAACATCCGCGAAAGTAAGATAGAGAAACTTCCAAAAGAAATTGCCAAGTTGTTAAATCTGCGCCATCTAATTATGTACCGTTACACTGATGATTTTCTTGGGTTTAGATATGTCAAAGGGACAAGAGTACCAGTGGATCTTAGTCAGATGAATAAATTGCAAGTTTTGTCATGTGTTGAGGCAGAAGGAGACACTATTAGGCGGGTCGGTTGTATGACCCAACTTGTAAGGATTGGAATTACTAATGTTAAAGAAAGTGATGAGATGCACCTGTGTGACAGCATTCAGAAGCTGCAACTCCTTCACTACTTGTTTCTAATGGCAAGTGATGAAGAGGAGATTCTTCGAACAAATGCACTATGTTCATCTCCTCCCCTACTTCGAGTGGTTATTTTGGTTGGCCGATTGGAGAATGTACCACTTTGGTTTCATTCACTCTGGAGCCTCACACATCTGTATCTGCATTGGTCTAAACTTGAAGAAAATTTGGTATCTCACATTGAAGCACTACCCAATCTGGGATATCTTACCCTTGTTAATGCATATGTTGGGAAACAGCTGTATTTTCGCAGAGGCTTTGTAAAGCTAAAGAAGCTGGAATCGTATAATCATCCCTTGTTGACAGAAATAACTATAGAAAATGGGGTAATGCCAAATCTCCATGACTTGCATGTTGAGAGCTGCATGTCATTAAAGACATTGCCACTGGGTCTTGAATTCCTTACTAATCTTCAAAAGTTGACATTAGAGACAGTTCCAAAAAAAATTATACTGCCCATTCGGAAAGGAGCTGTGGATCGTCCAAAGGTTCAACACATCCCTGAAATCCTCTATTTCTATGAAGAGTCATCTATGAGGTTCTATGAAAGACTGTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

912

Amino Acids

104.93

Weight (kDa)

8.62

Isoelectric Point (pI)

45.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 9 - 87 1.6e-20 Rx N-terminal domain
NB-ARC PF00931 180 - 349 6.8e-44 NB-ARC domain
nSTAND6 PF25201 180 - 284 2.3e-06 Novel STAND NTPase 6
WHD_DRP PF23559 438 - 509 3.1e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 550 - 869 9.6e-46 Leucine-rich repeat region
LRR_8 PF13855 570 - 623 2.4e-06 Leucine rich repeat
LRR_8 PF13855 592 - 643 6.5e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1866
AciI CCGC 5 cut(s) 11, 466, 1594, 1864, 2059
AclWI GGATC 3 cut(s) 610, 2001, 2661
AcoI YGGCCR 1 cut(s) 2257
AcsI RAATTY 6 cut(s) 233, 313, 1703, 1789, 2341, 2573
AcuI CTGAAG 1 cut(s) 1389
AfaI GTAC 6 cut(s) 436, 927, 1766, 1934, 1986, 2274
AfiI CCNNNNNNNGG 4 cut(s) 478, 1231, 1232, 2375
AflII CTTAAG 1 cut(s) 1777
AflIII ACRYGT 1 cut(s) 1384
AjiI CACGTC 1 cut(s) 263
AjnI CCWGG 1 cut(s) 999
AleI CACNNNNGTG 1 cut(s) 2130
AloI GAACNNNNNNTCC 4 cut(s) 47, 79, 252, 284
AlwI GGATC 3 cut(s) 610, 2001, 2661
AlwNI CAGNNNCTG 1 cut(s) 2149
AoxI GGCC 3 cut(s) 12, 1117, 2257
ApeKI GCWGC 2 cut(s) 2149, 2538
ApoI RAATTY 6 cut(s) 233, 313, 1703, 1789, 2341, 2573
ArsI GACNNNNNNTTYG 2 cut(s) 252, 284
AseI ATTAAT 1 cut(s) 539
Asp700I GAANNNNTTC 1 cut(s) 128
AspLEI GCGC 1 cut(s) 1920
AspS9I GGNCC 2 cut(s) 13, 1182
AsuHPI GGTGA 3 cut(s) 281, 922, 977
AsuII TTCGAA 1 cut(s) 2203
AvaII GGWCC 1 cut(s) 1182
BaeGI GKGCMC 1 cut(s) 880
BaeI ACNNNNGTAYC 4 cut(s) 1968, 2001, 2297, 2330
BanII GRGCYC 1 cut(s) 1238
BbsI GAAGAC 5 cut(s) 278, 617, 714, 1329, 1489
BbvI GCAGC 2 cut(s) 2136, 2525
BccI CCATC 3 cut(s) 589, 1562, 1929
BceAI ACGGC 1 cut(s) 1581
BciT130I CCWGG 1 cut(s) 1001
BciVI GTATCC 1 cut(s) 73
BclI TGATCA 2 cut(s) 445, 726
BfaI CTAG 6 cut(s) 134, 422, 839, 1127, 1718, 2734
BfmI CTRYAG 1 cut(s) 2490
BfrI CTTAAG 1 cut(s) 1777
BfuI GTATCC 1 cut(s) 73
BglII AGATCT 1 cut(s) 19
BisI GCNGC 3 cut(s) 12, 2150, 2539
BlsI GCNGC 3 cut(s) 13, 2151, 2540
BmcAI AGTACT 1 cut(s) 436
Bme1390I CCNGG 1 cut(s) 1001
Bme18I GGWCC 1 cut(s) 1182
BmgBI CACGTC 1 cut(s) 263
BmgT120I GGNCC 2 cut(s) 13, 1182
BmiI GGNNCC 4 cut(s) 364, 470, 762, 2300
BmrFI CCNGG 1 cut(s) 1001
BmrI ACTGGG 2 cut(s) 1241, 2573
BmsI GCATC 5 cut(s) 337, 453, 1219, 1491, 2112
BmuI ACTGGG 2 cut(s) 1241, 2573
BpiI GAAGAC 5 cut(s) 278, 617, 714, 1329, 1489
BplI GAGNNNNNCTC 8 cut(s) 424, 456, 912, 944, 1028, 1060, 1786, 1818
BpmI CTGGAG 1 cut(s) 2317
Bpu14I TTCGAA 1 cut(s) 2203
BpuEI CTTGAG 2 cut(s) 71, 1100
Bsa29I ATCGAT 1 cut(s) 1282
BsaBI GATNNNNATC 2 cut(s) 867, 1422
BsaI GGTCTC 1 cut(s) 1154
BsaJI CCNNGG 2 cut(s) 999, 1000
BsaXI ACNNNNNCTCC 6 cut(s) 258, 288, 1718, 1748, 1789, 1819
Bsc4I CCNNNNNNNGG 4 cut(s) 478, 1231, 1232, 2375
Bse1I ACTGG 5 cut(s) 75, 1236, 1407, 1988, 2568
Bse3DI GCAATG 1 cut(s) 2555
Bse8I GATNNNNATC 2 cut(s) 867, 1422
BseBI CCWGG 1 cut(s) 1001
BseCI ATCGAT 1 cut(s) 1282
BseDI CCNNGG 2 cut(s) 999, 1000
BseJI GATNNNNATC 2 cut(s) 867, 1422
BseLI CCNNNNNNNGG 4 cut(s) 478, 1231, 1232, 2375
BseMI GCAATG 1 cut(s) 2555
BseMII CTCAG 2 cut(s) 1273, 1530
BseNI ACTGG 5 cut(s) 75, 1236, 1407, 1988, 2568
BseRI GAGGAG 5 cut(s) 770, 796, 1810, 2207, 2217
BseSI GKGCMC 1 cut(s) 880
BseXI GCAGC 2 cut(s) 2136, 2525
Bsh1236I CGCG 1 cut(s) 1866
BshFI GGCC 3 cut(s) 14, 1119, 2259
BshVI ATCGAT 1 cut(s) 1282
BslFI GGGAC 2 cut(s) 273, 1990
BslI CCNNNNNNNGG 4 cut(s) 478, 1231, 1232, 2375
BsmFI GGGAC 2 cut(s) 273, 1990
BsmI GAATGC 1 cut(s) 2139
BsnI GGCC 3 cut(s) 14, 1119, 2259
Bso31I GGTCTC 1 cut(s) 1154
Bsp119I TTCGAA 1 cut(s) 2203
Bsp1286I GDGCHC 2 cut(s) 880, 1238
Bsp143I GATC 9 cut(s) 19, 445, 602, 630, 726, 1655, 1756, 1993, 2653
BspACI CCGC 5 cut(s) 11, 466, 1594, 1864, 2059
BspANI GGCC 3 cut(s) 14, 1119, 2259
BspCNI CTCAG 2 cut(s) 1272, 1531
BspDI ATCGAT 1 cut(s) 1282
BspFNI CGCG 1 cut(s) 1866
BspHI TCATGA 1 cut(s) 442
BspLI GGNNCC 4 cut(s) 364, 470, 762, 2300
BspPI GGATC 3 cut(s) 610, 2001, 2661
BspT104I TTCGAA 1 cut(s) 2203
BspTI CTTAAG 1 cut(s) 1777
BspTNI GGTCTC 1 cut(s) 1154
BsrDI GCAATG 1 cut(s) 2555
BsrI ACTGG 5 cut(s) 75, 1236, 1407, 1988, 2568
BssECI CCNNGG 2 cut(s) 999, 1000
BssMI GATC 9 cut(s) 19, 445, 602, 630, 726, 1655, 1756, 1993, 2653
Bst2UI CCWGG 1 cut(s) 1001
Bst4CI ACNGT 5 cut(s) 685, 1307, 1937, 2611, 2730
Bst6I CTCTTC 2 cut(s) 2184, 2694
BstAFI CTTAAG 1 cut(s) 1777
BstAPI GCANNNNNTGC 1 cut(s) 959
BstBI TTCGAA 1 cut(s) 2203
BstC8I GCNNGC 5 cut(s) 955, 976, 1451, 1524, 1594
BstDEI CTNAG 4 cut(s) 1214, 1259, 1539, 1997
BstFNI CGCG 1 cut(s) 1866
BstHHI GCGC 1 cut(s) 1920
BstKTI GATC 9 cut(s) 22, 448, 605, 633, 729, 1658, 1759, 1996, 2656
BstMBI GATC 9 cut(s) 19, 445, 602, 630, 726, 1655, 1756, 1993, 2653
BstMWI GCNNNNNNNGC 5 cut(s) 11, 959, 1136, 1589, 2449
BstNI CCWGG 1 cut(s) 1001
BstNSI RCATGY 4 cut(s) 1388, 1453, 2531, 2545
BstSCI CCNGG 1 cut(s) 999
BstSFI CTRYAG 1 cut(s) 2490
BstSLI GKGCMC 1 cut(s) 880
BstUI CGCG 1 cut(s) 1866
BstV1I GCAGC 2 cut(s) 2136, 2525
BstV2I GAAGAC 5 cut(s) 278, 617, 714, 1329, 1489
BstX2I RGATCY 3 cut(s) 19, 602, 1993
BstYI RGATCY 3 cut(s) 19, 602, 1993
Bsu15I ATCGAT 1 cut(s) 1282
BsuI GTATCC 1 cut(s) 73
BsuRI GGCC 3 cut(s) 14, 1119, 2259
BsuTUI ATCGAT 1 cut(s) 1282
BtrI CACGTC 1 cut(s) 263
BtsIMutI CAGTG 5 cut(s) 82, 1400, 1941, 1995, 2561
Cac8I GCNNGC 5 cut(s) 955, 976, 1451, 1524, 1594
CaiI CAGNNNCTG 1 cut(s) 2149
CciI TCATGA 1 cut(s) 442
CfoI GCGC 1 cut(s) 1920
Cfr13I GGNCC 2 cut(s) 13, 1182
ClaI ATCGAT 1 cut(s) 1282
Csp6I GTAC 6 cut(s) 435, 926, 1765, 1933, 1985, 2273
CspCI CAANNNNNGTGG 2 cut(s) 604, 639
CviQI GTAC 6 cut(s) 435, 926, 1765, 1933, 1985, 2273
DdeI CTNAG 4 cut(s) 1214, 1259, 1539, 1997
DpnI GATC 9 cut(s) 21, 447, 604, 632, 728, 1657, 1758, 1995, 2655
DpnII GATC 9 cut(s) 19, 445, 602, 630, 726, 1655, 1756, 1993, 2653
DraI TTTAAA 1 cut(s) 1788
EaeI YGGCCR 1 cut(s) 2257
Eam1104I CTCTTC 2 cut(s) 2184, 2694
EarI CTCTTC 2 cut(s) 2184, 2694
Eco24I GRGCYC 1 cut(s) 1238
Eco31I GGTCTC 1 cut(s) 1154
Eco32I GATATC 3 cut(s) 223, 1424, 2381
Eco47I GGWCC 1 cut(s) 1182
Eco57I CTGAAG 1 cut(s) 1389
EcoRI GAATTC 2 cut(s) 233, 2573
EcoRII CCWGG 1 cut(s) 999
EcoRV GATATC 3 cut(s) 223, 1424, 2381
EcoT22I ATGCAT 3 cut(s) 676, 1506, 2401
EcoT38I GRGCYC 1 cut(s) 1238
FalI AAGNNNNNCTT 4 cut(s) 492, 524, 946, 978
FaqI GGGAC 2 cut(s) 273, 1990
FauI CCCGC 2 cut(s) 1601, 2052
FauNDI CATATG 3 cut(s) 397, 882, 2401
FbaI TGATCA 2 cut(s) 445, 726
Fnu4HI GCNGC 3 cut(s) 12, 2150, 2539
FriOI GRGCYC 1 cut(s) 1238
Fsp4HI GCNGC 3 cut(s) 12, 2150, 2539
FspBI CTAG 6 cut(s) 134, 422, 839, 1127, 1718, 2734
GlaI GCGC 1 cut(s) 1919
GluI GCNGC 3 cut(s) 12, 2150, 2539
GsuI CTGGAG 1 cut(s) 2317
HaeIII GGCC 3 cut(s) 14, 1119, 2259
HhaI GCGC 1 cut(s) 1920
Hin6I GCGC 1 cut(s) 1918
HinP1I GCGC 1 cut(s) 1918
HincII GTYRAC 2 cut(s) 2478, 2598
HindII GTYRAC 2 cut(s) 2478, 2598
HindIII AAGCTT 1 cut(s) 721
HinfI GANTC 9 cut(s) 200, 246, 388, 805, 1347, 1374, 2197, 2456, 2702
HphI GGTGA 3 cut(s) 281, 922, 977
Hpy166II GTNNAC 7 cut(s) 82, 814, 985, 1070, 1182, 2478, 2598
Hpy188III TCNNGA 9 cut(s) 50, 83, 422, 443, 514, 899, 1319, 2296, 2570
Hpy8I GTNNAC 7 cut(s) 82, 814, 985, 1070, 1182, 2478, 2598
HpyCH4III ACNGT 5 cut(s) 685, 1307, 1937, 2611, 2730
HpyCH4IV ACGT 3 cut(s) 213, 262, 1685
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 959, 1136, 1589, 2449
HpyF3I CTNAG 4 cut(s) 1214, 1259, 1539, 1997
HpySE526I ACGT 3 cut(s) 213, 262, 1685
HspAI GCGC 1 cut(s) 1918
Ksp22I TGATCA 2 cut(s) 445, 726
Kzo9I GATC 9 cut(s) 19, 445, 602, 630, 726, 1655, 1756, 1993, 2653
LmnI GCTCC 5 cut(s) 783, 1021, 1813, 2298, 2645
Lsp1109I GCAGC 2 cut(s) 2136, 2525
LweI GCATC 5 cut(s) 337, 453, 1219, 1491, 2112
MaeI CTAG 6 cut(s) 134, 422, 839, 1127, 1718, 2734
MaeII ACGT 3 cut(s) 213, 262, 1685
MaeIII GTNAC 6 cut(s) 412, 679, 685, 1396, 1937, 2132
MalI GATC 9 cut(s) 21, 447, 604, 632, 728, 1657, 1758, 1995, 2655
MboI GATC 9 cut(s) 19, 445, 602, 630, 726, 1655, 1756, 1993, 2653
MfeI CAATTG 3 cut(s) 664, 1131, 1584
MflI RGATCY 3 cut(s) 19, 602, 1993
MhlI GDGCHC 2 cut(s) 880, 1238
MlyI GAGTC 3 cut(s) 194, 1341, 2711
Mph1103I ATGCAT 3 cut(s) 676, 1506, 2401
MroXI GAANNNNTTC 1 cut(s) 128
MslI CAYNNNNRTG 2 cut(s) 776, 2130
MspA1I CMGCKG 1 cut(s) 2416
MspCI CTTAAG 1 cut(s) 1777
MspR9I CCNGG 1 cut(s) 1001
MunI CAATTG 3 cut(s) 664, 1131, 1584
Mva1269I GAATGC 1 cut(s) 2139
MvaI CCWGG 1 cut(s) 1001
MvnI CGCG 1 cut(s) 1866
MwoI GCNNNNNNNGC 5 cut(s) 11, 959, 1136, 1589, 2449
NdeI CATATG 3 cut(s) 397, 882, 2401
NdeII GATC 9 cut(s) 19, 445, 602, 630, 726, 1655, 1756, 1993, 2653
NlaIV GGNNCC 4 cut(s) 364, 470, 762, 2300
NmuCI GTSAC 2 cut(s) 1396, 2132
NsiI ATGCAT 3 cut(s) 676, 1506, 2401
NspI RCATGY 4 cut(s) 1388, 1453, 2531, 2545
NspV TTCGAA 1 cut(s) 2203
OliI CACNNNNGTG 1 cut(s) 2130
PaeI GCATGC 1 cut(s) 1453
PagI TCATGA 1 cut(s) 442
PasI CCCWGGG 1 cut(s) 1000
PciI ACATGT 1 cut(s) 1384
PcsI WCGNNNNNNNCGW 1 cut(s) 268
PctI GAATGC 1 cut(s) 2139
PdmI GAANNNNTTC 1 cut(s) 128
PfeI GAWTC 6 cut(s) 246, 388, 805, 1374, 2197, 2456
PflFI GACNNNGTC 1 cut(s) 203
PkrI GCNGC 3 cut(s) 13, 2151, 2540
PleI GAGTC 3 cut(s) 194, 1341, 2710
PpsI GAGTC 3 cut(s) 194, 1341, 2710
PscI ACATGT 1 cut(s) 1384
PshBI ATTAAT 1 cut(s) 539
Psp6I CCWGG 1 cut(s) 999
PspGI CCWGG 1 cut(s) 999
PspN4I GGNNCC 4 cut(s) 364, 470, 762, 2300
PspPI GGNCC 2 cut(s) 13, 1182
PstNI CAGNNNCTG 1 cut(s) 2149
PsuI RGATCY 3 cut(s) 19, 602, 1993
PsyI GACNNNGTC 1 cut(s) 203
PvuII CAGCTG 1 cut(s) 2416
RsaI GTAC 6 cut(s) 436, 927, 1766, 1934, 1986, 2274
RsaNI GTAC 6 cut(s) 435, 926, 1765, 1933, 1985, 2273
RseI CAYNNNNRTG 2 cut(s) 776, 2130
SatI GCNGC 3 cut(s) 12, 2150, 2539
Sau3AI GATC 9 cut(s) 19, 445, 602, 630, 726, 1655, 1756, 1993, 2653
Sau96I GGNCC 2 cut(s) 13, 1182
ScaI AGTACT 1 cut(s) 436
SchI GAGTC 3 cut(s) 194, 1341, 2711
ScrFI CCNGG 1 cut(s) 1001
SduI GDGCHC 2 cut(s) 880, 1238
SfaNI GCATC 5 cut(s) 337, 453, 1219, 1491, 2112
SfcI CTRYAG 1 cut(s) 2490
SfuI TTCGAA 1 cut(s) 2203
SinI GGWCC 1 cut(s) 1182
SmiI ATTTAAAT 1 cut(s) 1788
SmiMI CAYNNNNRTG 2 cut(s) 776, 2130
SmlI CTYRAG 3 cut(s) 50, 1079, 1777
SmoI CTYRAG 3 cut(s) 50, 1079, 1777
SphI GCATGC 1 cut(s) 1453
SsiI CCGC 5 cut(s) 11, 466, 1594, 1864, 2059
SspMI CTAG 6 cut(s) 134, 422, 839, 1127, 1718, 2734
StyD4I CCNGG 1 cut(s) 999
SwaI ATTTAAAT 1 cut(s) 1788
TaaI ACNGT 5 cut(s) 685, 1307, 1937, 2611, 2730
TaiI ACGT 3 cut(s) 216, 265, 1688
TaqI TCGA 9 cut(s) 244, 271, 827, 919, 937, 1282, 1654, 2203, 2239
TatI WGTACW 2 cut(s) 434, 925
TauI GCSGC 1 cut(s) 14
TfiI GAWTC 6 cut(s) 246, 388, 805, 1374, 2197, 2456
TscAI CASTG 5 cut(s) 82, 1407, 1948, 1995, 2568
TseFI GTSAC 2 cut(s) 1396, 2132
TseI GCWGC 2 cut(s) 2149, 2538
Tsp45I GTSAC 2 cut(s) 1396, 2132
TspRI CASTG 5 cut(s) 82, 1407, 1948, 1995, 2568
Tth111I GACNNNGTC 1 cut(s) 203
Vha464I CTTAAG 1 cut(s) 1777
VpaK11BI GGWCC 1 cut(s) 1182
VspI ATTAAT 1 cut(s) 539
XapI RAATTY 6 cut(s) 233, 313, 1703, 1789, 2341, 2573
XbaI TCTAGA 1 cut(s) 421
XceI RCATGY 4 cut(s) 1388, 1453, 2531, 2545
XmnI GAANNNNTTC 1 cut(s) 128
XspI CTAG 6 cut(s) 134, 422, 839, 1127, 1718, 2734
ZrmI AGTACT 1 cut(s) 436
Zsp2I ATGCAT 3 cut(s) 676, 1506, 2401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.