Rmu_sc0002197.1_g000002

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002197.1
OG0000110
Physical Location & Seq
Forward (+)
8630 .. 11377
2748 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002197.1_g000002.1.cds

Sequence Viewer

Length: 2748 bp
atggcttcagctgcaatagaccttttgcttgggaaaatagtgtcatttcttgacgaccaattgtcactgttaggaggagttcatgatgaacttgaagaaatcaagcgcgagcttatagtcatgaaagccttcttggaggatgcagaaagaaccggtgttctcagtgaagtggagaaaacatgggtggcgaatgtgagggacgtatccgtaaacgttgaagacttcattgacgaattcacctaccacatcaacaaccagagaagttggagtccatttacaagaacacttcgtaaatcccttcgcttccctaagaatctttgggagaggcatcggattgccacaaagttgcagaagatcatcaaaattatcaaagccattccagagagaagcctacgttacggagttaaacgtatagaaggtgtttcttattcccactacgatcctgatcggctgagaatcttaagggagtcatctcttttccttcaagatgatgaagtggtgggaattgtagatgctaaagagaagttggtcacaatgttgttgtcttcacaagctcaaagaactgtgatttctgttgttggaatgggtggctctggcaagactaccttggttgcaaagaccttcaatggccagactgtaaagcaacatttcgattgctgtgcgtggattactgtctcgcaaacgtacacggttgaagatctactcagagtaatcatgaaggagcttctccgagcagtgaaggagcagattccagtagacttgagcgacatgagatattcacatttggtggaaatgctggccagctatttgaaggaaaagaggtacatgattgtcttagatgatgtgtgggatatcaatctttggagagaaataagtgcggcacttccagaaggaccacatggaagccgggtcatgcttacaactcgtaaagaagacgttgcttcttttccatttgggcttggaagttatgtccaccatgttcagcctctaaacaagagtgaggcatggcatcttttttccatgaaagctttcttcagttgtcctaatagctgttgtccaactgagctcgaacatatagctagagatcttgttgacaaatgcgaaggcttacctctaggaattgttgctttgggcgctctcatgtcaaccaaaagtgttctgtccgagtggatgaaggtttacggcagcttgaactgggagctatgcaacaaccctaggcttgaagtggtgaagagcatcttactgttgagcttcaatgatttaccatatcggctaaagcattgcttcctatattgttgtgttttcctcgaagattatgtgatccagtgtagaaggcttattagactgtggatagcggaggggtttgtggaacaagttagaggtgctaagacagaagagatagctgagagctacatggcggagctcacgtgtcgatgcatgcttcaagtagttgagagggaaccatctgggagggcagaaacatttaggatgcatgatcttctgcgagaactctgcatttcaatttcagaagctgagaacttttgtaccatatacaatgaccaagaaccagctaaagagagcaaggctcgccgcgtgtcaatgcaagcgaattctcgagcactaagaaatccgaaagacatttcgaaggttcgcacatttttcatgtttgctgctttttcattgaattatctgccatctggtttccaactgttgagaattctagaccttgaagatgttccgattgtgcagttgccagatgacatagtgaactgcttcaaattgatgtatttaaatttgagaagcacaaaagttaaagagcttcccaaagacatagggaaactcagcaacttagaaatgctaaacataagcaattcgaaaattagattacttccggttgggattttgaagttacagaagctacaccatctcttgatgttgcattttaatgatcaaaagttgtgttcttttgattgtcttgacggctgcacacaagctccgccgggcatttgtaagctaaagagcttacaagttctggatacagtcaacgtggaaggcgagttgatcgaacaacttcagtccatgacgcaactcacaagacttggcttagcaaatgtgagggaagctgatgaaaaagatctatgcaaggcgctcgaaaacatgaaactcattgagcagttgaatgtcatgacaaccgatgaggatgaggtgttgcgcatggacgcattagcggagggtcctccaatgctcaacacacttttcctaactggaaagttagagaggattccactttggttccattctcttcatagcctttcgtacttggctttgctctggtctagagtaacacatgattttcttccttgcatccaagagctgccaaatttgaccaggctgtggttgattaatgcatatacaggagacgagttagtctttcgcagtggattccgaaagctcaccgagttgatactgctcaacttttctcagttgtctgtgatcatcatagagaagggagtgatgccggcattaaagacactggatatatgggaatgcatgcagttgaagcaaattcctcggggcattgaacatctcacaaatctcaaacaattgactctgttaggtgttcccaatgagctgattgagtgcatgcgaggagaaggaagcatggataactcaaaggttaagcagattcccaacattggttattgctacaaaactaggtttgggtggtctcatggtagaacgcgatga

Protein Analysis

915

Amino Acids

104.91

Weight (kDa)

6.74

Isoelectric Point (pI)

41.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2426
Acc16I TGCGCA 1 cut(s) 2213
AccB7I CCANNNNNTGG 1 cut(s) 2394
AccI GTMKAC 1 cut(s) 756
AccII CGCG 3 cut(s) 108, 1593, 2743
AciI CCGC 6 cut(s) 878, 1355, 1418, 1591, 1997, 2228
AclI AACGTT 1 cut(s) 213
AclWI GGATC 2 cut(s) 434, 1315
AcoI YGGCCR 2 cut(s) 628, 798
AcsI RAATTY 6 cut(s) 233, 1609, 1716, 1792, 2380, 2565
AcuI CTGAAG 2 cut(s) 1018, 2057
AcvI CACGTG 1 cut(s) 1428
AfaI GTAC 4 cut(s) 686, 824, 1546, 2318
AfiI CCNNNNNNNGG 2 cut(s) 2394, 2696
AflII CTTAAG 1 cut(s) 460
AflIII ACRYGT 1 cut(s) 1427
AgeI ACCGGT 1 cut(s) 152
AhdI GACNNNNNGTC 1 cut(s) 61
AjnI CCWGG 1 cut(s) 2387
AjuI GAANNNNNNNTTGG 2 cut(s) 116, 148
Alw21I GWGCWC 3 cut(s) 1068, 1425, 1621
Alw26I GTCTC 3 cut(s) 679, 2412, 2733
AlwI GGATC 2 cut(s) 434, 1315
AlwNI CAGNNNCTG 1 cut(s) 1532
Ama87I CYCGRG 2 cut(s) 1614, 2571
AoxI GGCC 2 cut(s) 628, 798
ApeKI GCWGC 5 cut(s) 11, 1185, 1670, 1983, 2374
ApoI RAATTY 6 cut(s) 233, 1609, 1716, 1792, 2380, 2565
AseI ATTAAT 1 cut(s) 2403
AsiGI ACCGGT 1 cut(s) 152
Asp700I GAANNNNTTC 5 cut(s) 128, 1028, 1734, 1772, 2070
AspA2I CCTAGG 1 cut(s) 1214
AspLEI GCGC 4 cut(s) 108, 1136, 2149, 2214
AspS9I GGNCC 2 cut(s) 893, 2234
AsuC2I CCSGG 2 cut(s) 908, 2001
AsuHPI GGTGA 3 cut(s) 229, 1240, 2446
AsuII TTCGAA 2 cut(s) 1643, 1874
AvaI CYCGRG 2 cut(s) 1614, 2571
AvaII GGWCC 2 cut(s) 893, 2234
AvrII CCTAGG 1 cut(s) 1214
BaeI ACNNNNGTAYC 2 cut(s) 1528, 1561
BalI TGGCCA 2 cut(s) 630, 800
BanII GRGCYC 2 cut(s) 1068, 1425
BbrPI CACGTG 1 cut(s) 1428
BbsI GAAGAC 3 cut(s) 225, 537, 939
Bbv12I GWGCWC 3 cut(s) 1068, 1425, 1621
BbvI GCAGC 4 cut(s) 1197, 1657, 1970, 2361
BccI CCATC 3 cut(s) 1471, 1702, 1932
BceAI ACGGC 2 cut(s) 1198, 1996
BcgI CGANNNNNNTGC 8 cut(s) 641, 675, 1494, 1528, 2131, 2165, 2552, 2586
BciT130I CCWGG 1 cut(s) 2389
BciVI GTATCC 2 cut(s) 214, 2029
BclI TGATCA 2 cut(s) 1948, 2493
BcnI CCSGG 2 cut(s) 908, 2001
BcoDI GTCTC 3 cut(s) 679, 2412, 2733
BfaI CTAG 6 cut(s) 1080, 1115, 1215, 1721, 2337, 2715
BfoI RGCGCY 2 cut(s) 1137, 2150
BfrI CTTAAG 1 cut(s) 460
BfuI GTATCC 2 cut(s) 214, 2029
BglII AGATCT 3 cut(s) 697, 1084, 2134
BisI GCNGC 7 cut(s) 12, 879, 1186, 1591, 1671, 1984, 2375
BlnI CCTAGG 1 cut(s) 1214
BlpI GCTNAGC 1 cut(s) 2104
BlsI GCNGC 7 cut(s) 13, 880, 1187, 1592, 1672, 1985, 2376
Bme1390I CCNGG 3 cut(s) 908, 2001, 2389
Bme18I GGWCC 2 cut(s) 893, 2234
BmeRI GACNNNNNGTC 1 cut(s) 61
BmeT110I CYCGRG 2 cut(s) 1614, 2571
BmgT120I GGNCC 2 cut(s) 893, 2234
BmiI GGNNCC 3 cut(s) 1461, 2235, 2294
BmrFI CCNGG 3 cut(s) 908, 2001, 2389
BmrI ACTGGG 1 cut(s) 1204
BmsI GCATC 9 cut(s) 130, 337, 502, 1018, 1245, 1424, 1479, 2373, 2505
BmuI ACTGGG 1 cut(s) 1204
BpiI GAAGAC 3 cut(s) 225, 537, 939
BplI GAGNNNNNCTC 2 cut(s) 1570, 1602
Bpu1102I GCTNAGC 1 cut(s) 2104
Bpu14I TTCGAA 2 cut(s) 1643, 1874
BpuEI CTTGAG 1 cut(s) 781
BpuMI CCSGG 2 cut(s) 908, 2001
BsaAI YACGTR 1 cut(s) 1428
BsaBI GATNNNNATC 2 cut(s) 444, 855
BsaI GGTCTC 1 cut(s) 2733
BsaJI CCNNGG 3 cut(s) 606, 1214, 2570
BsaWI WCCGGW 2 cut(s) 152, 1891
BsaXI ACNNNNNCTCC 4 cut(s) 1412, 1442, 1978, 2008
Bsc4I CCNNNNNNNGG 2 cut(s) 2394, 2696
Bse118I RCCGGY 2 cut(s) 152, 2518
Bse1I ACTGG 5 cut(s) 752, 1199, 1324, 2269, 2538
Bse3DI GCAATG 1 cut(s) 1279
Bse8I GATNNNNATC 2 cut(s) 444, 855
BseBI CCWGG 1 cut(s) 2389
BseDI CCNNGG 3 cut(s) 606, 1214, 2570
BseGI GGATG 5 cut(s) 145, 1176, 1494, 2206, 2364
BseJI GATNNNNATC 2 cut(s) 444, 855
BseLI CCNNNNNNNGG 2 cut(s) 2394, 2696
BseMI GCAATG 1 cut(s) 1279
BseMII CTCAG 8 cut(s) 175, 443, 718, 1053, 1395, 1524, 1855, 2495
BseNI ACTGG 5 cut(s) 752, 1199, 1324, 2269, 2538
BseRI GAGGAG 2 cut(s) 90, 2664
BseXI GCAGC 4 cut(s) 1197, 1657, 1970, 2361
BsgI GTGCAG 2 cut(s) 1766, 1969
Bsh1236I CGCG 3 cut(s) 108, 1593, 2743
BshFI GGCC 2 cut(s) 630, 800
BshTI ACCGGT 1 cut(s) 152
BsiHKAI GWGCWC 3 cut(s) 1068, 1425, 1621
BsiHKCI CYCGRG 2 cut(s) 1614, 2571
BsiSI CCGG 5 cut(s) 153, 907, 1892, 2000, 2519
BslFI GGGAC 1 cut(s) 212
BslI CCNNNNNNNGG 2 cut(s) 2394, 2696
BsmAI GTCTC 3 cut(s) 679, 2412, 2733
BsmBI CGTCTC 1 cut(s) 2412
BsmFI GGGAC 1 cut(s) 212
BsmI GAATGC 1 cut(s) 2552
BsnI GGCC 2 cut(s) 630, 800
Bso31I GGTCTC 1 cut(s) 2733
BsoBI CYCGRG 2 cut(s) 1614, 2571
Bsp119I TTCGAA 2 cut(s) 1643, 1874
Bsp1286I GDGCHC 3 cut(s) 1068, 1425, 1621
Bsp1720I GCTNAGC 1 cut(s) 2104
BspACI CCGC 6 cut(s) 878, 1355, 1418, 1591, 1997, 2228
BspANI GGCC 2 cut(s) 630, 800
BspCNI CTCAG 8 cut(s) 174, 444, 717, 1054, 1396, 1525, 1854, 2494
BspFNI CGCG 3 cut(s) 108, 1593, 2743
BspHI TCATGA 4 cut(s) 82, 120, 714, 2184
BspLI GGNNCC 3 cut(s) 1461, 2235, 2294
BspPI GGATC 2 cut(s) 434, 1315
BspQI GCTCTTC 1 cut(s) 1226
BspT104I TTCGAA 2 cut(s) 1643, 1874
BspTI CTTAAG 1 cut(s) 460
BspTNI GGTCTC 1 cut(s) 2733
BsrDI GCAATG 1 cut(s) 1279
BsrFI RCCGGY 2 cut(s) 152, 2518
BsrI ACTGG 5 cut(s) 752, 1199, 1324, 2269, 2538
BssAI RCCGGY 2 cut(s) 152, 2518
BssECI CCNNGG 3 cut(s) 606, 1214, 2570
BssT1I CCWWGG 2 cut(s) 606, 1214
Bst2UI CCWGG 1 cut(s) 2389
Bst4CI ACNGT 9 cut(s) 69, 565, 637, 673, 691, 1245, 1347, 1710, 2041
Bst6I CTCTTC 3 cut(s) 1226, 1389, 2307
BstAFI CTTAAG 1 cut(s) 460
BstBAI YACGTR 1 cut(s) 1428
BstBI TTCGAA 2 cut(s) 1643, 1874
BstC8I GCNNGC 9 cut(s) 110, 798, 802, 1439, 1588, 1605, 2520, 2552, 2645
BstF5I GGATG 5 cut(s) 145, 1176, 1494, 2206, 2364
BstFNI CGCG 3 cut(s) 108, 1593, 2743
BstH2I RGCGCY 2 cut(s) 1137, 2150
BstHHI GCGC 4 cut(s) 108, 1136, 2149, 2214
BstMAI GTCTC 3 cut(s) 679, 2412, 2733
BstMWI GCNNNNNNNGC 4 cut(s) 11, 1133, 1587, 2560
BstNI CCWGG 1 cut(s) 2389
BstNSI RCATGY 3 cut(s) 1441, 2554, 2647
BstSCI CCNGG 3 cut(s) 906, 1999, 2387
BstUI CGCG 3 cut(s) 108, 1593, 2743
BstV1I GCAGC 4 cut(s) 1197, 1657, 1970, 2361
BstV2I GAAGAC 3 cut(s) 225, 537, 939
BstX2I RGATCY 3 cut(s) 697, 1084, 2134
BstYI RGATCY 3 cut(s) 697, 1084, 2134
BsuI GTATCC 2 cut(s) 214, 2029
BsuRI GGCC 2 cut(s) 630, 800
BtsCI GGATG 5 cut(s) 145, 1176, 1494, 2206, 2364
BtsI GCAGTG 2 cut(s) 741, 2443
BtsIMutI CAGTG 6 cut(s) 65, 169, 741, 1331, 2443, 2531
Cac8I GCNNGC 9 cut(s) 110, 798, 802, 1439, 1588, 1605, 2520, 2552, 2645
CaiI CAGNNNCTG 1 cut(s) 1532
CciI TCATGA 4 cut(s) 82, 120, 714, 2184
CfoI GCGC 4 cut(s) 108, 1136, 2149, 2214
Cfr10I RCCGGY 2 cut(s) 152, 2518
Cfr13I GGNCC 2 cut(s) 893, 2234
CseI GACGC 2 cut(s) 2092, 2228
Csp6I GTAC 4 cut(s) 685, 823, 1545, 2317
CspAI ACCGGT 1 cut(s) 152
CviQI GTAC 4 cut(s) 685, 823, 1545, 2317
DraI TTTAAA 1 cut(s) 1791
DrdI GACNNNNNNGTC 1 cut(s) 2426
DriI GACNNNNNGTC 1 cut(s) 61
DseDI GACNNNNNNGTC 1 cut(s) 2426
EaeI YGGCCR 2 cut(s) 628, 798
Eam1104I CTCTTC 3 cut(s) 1226, 1389, 2307
Eam1105I GACNNNNNGTC 1 cut(s) 61
EarI CTCTTC 3 cut(s) 1226, 1389, 2307
EciI GGCGGA 2 cut(s) 1433, 1986
Ecl136II GAGCTC 2 cut(s) 1066, 1423
Eco130I CCWWGG 2 cut(s) 606, 1214
Eco24I GRGCYC 2 cut(s) 1068, 1425
Eco31I GGTCTC 1 cut(s) 2733
Eco32I GATATC 1 cut(s) 853
Eco47I GGWCC 2 cut(s) 893, 2234
Eco53kI GAGCTC 2 cut(s) 1066, 1423
Eco57I CTGAAG 2 cut(s) 1018, 2057
Eco72I CACGTG 1 cut(s) 1428
Eco88I CYCGRG 2 cut(s) 1614, 2571
EcoICRI GAGCTC 2 cut(s) 1066, 1423
EcoO109I RGGNCCY 1 cut(s) 2234
EcoRI GAATTC 3 cut(s) 233, 1609, 1716
EcoRII CCWGG 1 cut(s) 2387
EcoRV GATATC 1 cut(s) 853
EcoT14I CCWWGG 2 cut(s) 606, 1214
EcoT22I ATGCAT 4 cut(s) 1439, 1494, 2410, 2552
EcoT38I GRGCYC 2 cut(s) 1068, 1425
ErhI CCWWGG 2 cut(s) 606, 1214
Esp3I CGTCTC 1 cut(s) 2412
FalI AAGNNNNNCTT 6 cut(s) 590, 622, 1223, 1255, 1268, 1300
FaqI GGGAC 1 cut(s) 212
FbaI TGATCA 2 cut(s) 1948, 2493
FblI GTMKAC 1 cut(s) 756
Fnu4HI GCNGC 7 cut(s) 12, 879, 1186, 1591, 1671, 1984, 2375
FokI GGATG 5 cut(s) 152, 1183, 1501, 2213, 2351
FriOI GRGCYC 2 cut(s) 1068, 1425
Fsp4HI GCNGC 7 cut(s) 12, 879, 1186, 1591, 1671, 1984, 2375
FspBI CTAG 6 cut(s) 1080, 1115, 1215, 1721, 2337, 2715
FspI TGCGCA 1 cut(s) 2213
GlaI GCGC 4 cut(s) 107, 1135, 2148, 2213
GluI GCNGC 7 cut(s) 12, 879, 1186, 1591, 1671, 1984, 2375
HaeII RGCGCY 2 cut(s) 1137, 2150
HaeIII GGCC 2 cut(s) 630, 800
HapII CCGG 5 cut(s) 153, 907, 1892, 2000, 2519
HgaI GACGC 2 cut(s) 2092, 2228
HhaI GCGC 4 cut(s) 108, 1136, 2149, 2214
Hin6I GCGC 4 cut(s) 106, 1134, 2147, 2212
HinP1I GCGC 4 cut(s) 106, 1134, 2147, 2212
HincII GTYRAC 3 cut(s) 1093, 1146, 2044
HindII GTYRAC 3 cut(s) 1093, 1146, 2044
HindIII AAGCTT 1 cut(s) 1026
HinfI GANTC 9 cut(s) 268, 313, 456, 467, 748, 2281, 2442, 2608, 2686
HpaII CCGG 5 cut(s) 153, 907, 1892, 2000, 2519
HphI GGTGA 3 cut(s) 229, 1240, 2446
Hpy166II GTNNAC 9 cut(s) 211, 687, 757, 973, 1093, 1146, 1180, 1768, 2044
Hpy188I TCNGA 8 cut(s) 333, 707, 731, 1165, 1528, 1632, 1740, 2447
Hpy8I GTNNAC 9 cut(s) 211, 687, 757, 973, 1093, 1146, 1180, 1768, 2044
HpyCH4III ACNGT 9 cut(s) 69, 565, 637, 673, 691, 1245, 1347, 1710, 2041
HpyCH4IV ACGT 8 cut(s) 201, 213, 394, 409, 683, 936, 1427, 2046
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 1133, 1587, 2560
HpySE526I ACGT 8 cut(s) 201, 213, 394, 409, 683, 936, 1427, 2046
HspAI GCGC 4 cut(s) 106, 1134, 2147, 2212
KroI GCCGGC 1 cut(s) 2518
KroNI GCCGGC 1 cut(s) 2520
Ksp22I TGATCA 2 cut(s) 1948, 2493
LguI GCTCTTC 1 cut(s) 1226
LmnI GCTCC 5 cut(s) 721, 742, 1198, 1420, 1999
Lsp1109I GCAGC 4 cut(s) 1197, 1657, 1970, 2361
LweI GCATC 9 cut(s) 130, 337, 502, 1018, 1245, 1424, 1479, 2373, 2505
MaeI CTAG 6 cut(s) 1080, 1115, 1215, 1721, 2337, 2715
MaeII ACGT 8 cut(s) 201, 213, 394, 409, 683, 936, 1427, 2046
MaeIII GTNAC 5 cut(s) 63, 395, 529, 1908, 2341
MfeI CAATTG 2 cut(s) 59, 2603
MflI RGATCY 3 cut(s) 697, 1084, 2134
MhlI GDGCHC 3 cut(s) 1068, 1425, 1621
MlsI TGGCCA 2 cut(s) 630, 800
MluNI TGGCCA 2 cut(s) 630, 800
MlyI GAGTC 3 cut(s) 277, 476, 2602
MmeI TCCRAC 4 cut(s) 245, 559, 1082, 1729
Mox20I TGGCCA 2 cut(s) 630, 800
Mph1103I ATGCAT 4 cut(s) 1439, 1494, 2410, 2552
MroNI GCCGGC 1 cut(s) 2518
MroXI GAANNNNTTC 5 cut(s) 128, 1028, 1734, 1772, 2070
MscI TGGCCA 2 cut(s) 630, 800
MseI TTAA 8 cut(s) 405, 461, 1790, 1812, 1944, 2403, 2525, 2679
MslI CAYNNNNRTG 1 cut(s) 1944
Msp20I TGGCCA 2 cut(s) 630, 800
MspA1I CMGCKG 1 cut(s) 11
MspCI CTTAAG 1 cut(s) 460
MspI CCGG 5 cut(s) 153, 907, 1892, 2000, 2519
MspR9I CCNGG 3 cut(s) 908, 2001, 2389
MunI CAATTG 2 cut(s) 59, 2603
Mva1269I GAATGC 1 cut(s) 2552
MvaI CCWGG 1 cut(s) 2389
MvnI CGCG 3 cut(s) 108, 1593, 2743
MwoI GCNNNNNNNGC 4 cut(s) 11, 1133, 1587, 2560
NaeI GCCGGC 1 cut(s) 2520
NciI CCSGG 2 cut(s) 908, 2001
NgoMIV GCCGGC 1 cut(s) 2518
NlaIV GGNNCC 3 cut(s) 1461, 2235, 2294
NmuCI GTSAC 2 cut(s) 63, 529
NsbI TGCGCA 1 cut(s) 2213
NsiI ATGCAT 4 cut(s) 1439, 1494, 2410, 2552
NspI RCATGY 3 cut(s) 1441, 2554, 2647
NspV TTCGAA 2 cut(s) 1643, 1874
PaeI GCATGC 3 cut(s) 1441, 2554, 2647
PaeR7I CTCGAG 1 cut(s) 1614
PagI TCATGA 4 cut(s) 82, 120, 714, 2184
PciSI GCTCTTC 1 cut(s) 1226
PcsI WCGNNNNNNNCGW 1 cut(s) 2052
PctI GAATGC 1 cut(s) 2552
PdiI GCCGGC 1 cut(s) 2520
PdmI GAANNNNTTC 5 cut(s) 128, 1028, 1734, 1772, 2070
PfeI GAWTC 6 cut(s) 313, 456, 748, 2281, 2442, 2686
PflMI CCANNNNNTGG 1 cut(s) 2394
PinAI ACCGGT 1 cut(s) 152
PkrI GCNGC 7 cut(s) 13, 880, 1187, 1592, 1672, 1985, 2376
PleI GAGTC 3 cut(s) 276, 475, 2602
PmaCI CACGTG 1 cut(s) 1428
PmlI CACGTG 1 cut(s) 1428
PpsI GAGTC 3 cut(s) 276, 475, 2602
Ppu21I YACGTR 1 cut(s) 1428
PpuMI RGGWCCY 1 cut(s) 2234
PshBI ATTAAT 1 cut(s) 2403
Psp124BI GAGCTC 2 cut(s) 1068, 1425
Psp1406I AACGTT 1 cut(s) 213
Psp5II RGGWCCY 1 cut(s) 2234
Psp6I CCWGG 1 cut(s) 2387
PspCI CACGTG 1 cut(s) 1428
PspGI CCWGG 1 cut(s) 2387
PspN4I GGNNCC 3 cut(s) 1461, 2235, 2294
PspPI GGNCC 2 cut(s) 893, 2234
PspPPI RGGWCCY 1 cut(s) 2234
PstNI CAGNNNCTG 1 cut(s) 1532
PsuI RGATCY 3 cut(s) 697, 1084, 2134
PvuII CAGCTG 1 cut(s) 11
RsaI GTAC 4 cut(s) 686, 824, 1546, 2318
RsaNI GTAC 4 cut(s) 685, 823, 1545, 2317
RseI CAYNNNNRTG 1 cut(s) 1944
SacI GAGCTC 2 cut(s) 1068, 1425
SapI GCTCTTC 1 cut(s) 1226
SaqAI TTAA 8 cut(s) 405, 461, 1790, 1812, 1944, 2403, 2525, 2679
SatI GCNGC 7 cut(s) 12, 879, 1186, 1591, 1671, 1984, 2375
Sau96I GGNCC 2 cut(s) 893, 2234
SchI GAGTC 3 cut(s) 277, 476, 2602
ScrFI CCNGG 3 cut(s) 908, 2001, 2389
SduI GDGCHC 3 cut(s) 1068, 1425, 1621
SfaNI GCATC 9 cut(s) 130, 337, 502, 1018, 1245, 1424, 1479, 2373, 2505
Sfr274I CTCGAG 1 cut(s) 1614
SfuI TTCGAA 2 cut(s) 1643, 1874
SinI GGWCC 2 cut(s) 893, 2234
SlaI CTCGAG 1 cut(s) 1614
SmiI ATTTAAAT 1 cut(s) 1791
SmiMI CAYNNNNRTG 1 cut(s) 1944
SmlI CTYRAG 3 cut(s) 460, 760, 1614
SmoI CTYRAG 3 cut(s) 460, 760, 1614
SphI GCATGC 3 cut(s) 1441, 2554, 2647
SsiI CCGC 6 cut(s) 878, 1355, 1418, 1591, 1997, 2228
SspMI CTAG 6 cut(s) 1080, 1115, 1215, 1721, 2337, 2715
SstI GAGCTC 2 cut(s) 1068, 1425
StyD4I CCNGG 3 cut(s) 906, 1999, 2387
StyI CCWWGG 2 cut(s) 606, 1214
SwaI ATTTAAAT 1 cut(s) 1791
TaaI ACNGT 9 cut(s) 69, 565, 637, 673, 691, 1245, 1347, 1710, 2041
TaiI ACGT 8 cut(s) 204, 216, 397, 412, 686, 939, 1430, 2049
TaqI TCGA 9 cut(s) 651, 1068, 1308, 1432, 1615, 1643, 1874, 2064, 2151
TauI GCSGC 2 cut(s) 881, 1593
TfiI GAWTC 6 cut(s) 313, 456, 748, 2281, 2442, 2686
Tru1I TTAA 8 cut(s) 405, 461, 1790, 1812, 1944, 2403, 2525, 2679
Tru9I TTAA 8 cut(s) 405, 461, 1790, 1812, 1944, 2403, 2525, 2679
TscAI CASTG 6 cut(s) 72, 169, 741, 1331, 2443, 2538
TseFI GTSAC 2 cut(s) 63, 529
TseI GCWGC 5 cut(s) 11, 1185, 1670, 1983, 2374
Tsp45I GTSAC 2 cut(s) 63, 529
TspGWI ACGGA 2 cut(s) 196, 414
TspRI CASTG 6 cut(s) 72, 169, 741, 1331, 2443, 2538
Van91I CCANNNNNTGG 1 cut(s) 2394
Vha464I CTTAAG 1 cut(s) 460
VpaK11BI GGWCC 2 cut(s) 893, 2234
VspI ATTAAT 1 cut(s) 2403
XapI RAATTY 6 cut(s) 233, 1609, 1716, 1792, 2380, 2565
XbaI TCTAGA 2 cut(s) 1720, 2336
XceI RCATGY 3 cut(s) 1441, 2554, 2647
XhoI CTCGAG 1 cut(s) 1614
XmaJI CCTAGG 1 cut(s) 1214
XmiI GTMKAC 1 cut(s) 756
XmnI GAANNNNTTC 5 cut(s) 128, 1028, 1734, 1772, 2070
XspI CTAG 6 cut(s) 1080, 1115, 1215, 1721, 2337, 2715
Zsp2I ATGCAT 4 cut(s) 1439, 1494, 2410, 2552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.