Prupe.8G007600_v2.0.a1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000110
Physical Location & Seq
Forward (+)
573092 .. 576427
3336 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G007600.1

Sequence Viewer

Length: 2745 bp
ATGGCCTCGGCTACAACAGATCTCTTGATTGGCAAAATTGTAGGCATCCTCGAGAATGAAGCATCCGCCATAGCCGGTGTTGGTGATCAAGTTGATGAGATTAAACAGGAGCTTCTATACATGAAATCCTTCCTACAAGATGCTGAGGGCAAGGAACCACACACGGAAGGAGAGAAAACGTGGGTTACAATGGTGAGAAACTTGACCTTTAAAGCTGAAGTTATCGTTGACAAATTCATGTATGACATGTATGAGCAGCAAAGTCAGGGTAGATTCGCGGGGTGGCTCCAGAAACCCATTCACATTCCAAAGATTCTTTGGTATAGGCGTCAAGTCGCCATTGAGTTACAGAAAATCACAAGAACGATCAAAGCCATTCCAGAGAGGAATCAAAGATATGGTGTTGGTTCCCTAAGCAGTTCGTCTAATGATAATCACAAATGGGTGAAGAACCAAGTGGATCAGTCTTCTCTTTTCATTAAGGAAGATGAGCTCGTGGGGATTGAAAGAAAGAAGCAAACATTGATGGAAAGGCTGATGAGTGAAGAACGACACCAAATGGTTGTGTCCGTGGTCGGTATGGGAGGATCAGGGAAGACCACTCTAGTTGCCAAGACCTTCACCGATGAAACTATAAAGAGATATTTCGACTGTTATGCATGGATAACTGTTTCCCAAACCTACGTGATTGAAGACTTATTTAGAAGCTTGATCAAGGAATTTCACCGATCAAGAAAGGAAGAGGTCCCTCCAAGCATGAGTTCTCTTGAACATACAGAACTGGTAGAGATGCTTCGCAACTACTTGGATGCCAAAAGGTACCTTGTTGTACTAGATGATGTGTGGGATATCAAACTTTGGGAACGAGTAAGGATATCGCTTCCAGATAGCAGAGCTCTTGGAAACCGGATCTTGCTTACAACTCGAAATCAAGAAATTGCATTGTATCCTTTTGGAGTAGAAAGCCATGTTTATCGAATTGAACTCCTGGAAAAGGATGAGGCTTGGGAGCTCTTTAACAAGAAAGCATTCTCAACTTATCATGAGCATTGTTGTCCACCAGAGTTTGAATCATTAGCTTCGGAACTTGTGGAAAAGTGCGAAGGCTTGCCTCTTGCAATTGTGGCTTTAAGTGGTGTTCTGTCTTCCAAGGAGTCCCCTACAGAGTGGAGCAAAGTGTACAGCAGCTTGAATTGGCAGCTGACAAACAACCCTTTGCTAAAACCTATGACGACCATCTTGTTGCTTAGTTTCGATGATTTGCCATATCAATTGAAGCATTGTTTCATGTACTGTTCCCTTTTCCCAGAAGACTATTTGATCGATGGAGAAAGGCTCATTAGATTGTGGTTGGCTGAAGGATTTGTTGAGCAAGTCGACGGGCTTACACCGGAAGAAGTTGCAGAGAACTATCTTATTGAACTTATTCGTCGTAGTATGCTAAAAGTTGAAGATCGGACTGACATGGGAAAGGCCCTAGCATATAAAATGCACGACATTTTGCGGGAGCTCGCTCTATCCATGTCACAAAAAGAAAACTTTTCTGCAAACTATGTTGGGAGAGAAATGAGAAAGGTTACAGCTCGTCGTTTGTCAATTCAAACAACTGAAGGAGAAATTAGCTCAATAAAAGGTTTGTCAGAGCTCCGTTCTTTTCTTGTCTTTGTCACTAGCACATTTTCACTGCCTTCTAGATCTAAATTATTGAAGGTTCTAGATTTGGAGAAAGTCTCCATGGATAAGCTCCCAAGTGGATTAGTGTATTTATTTAACTTGAGGTATTTAAATTTGAGGGGAACTTCAATTAAGGAGCTTCCAAAATTTATAGGAAGACTTGGAAACCTTGAAACCTTGGACATATCACACACCAAAATAGAAGTACTTCCAAGAGGAATTTCCAAGTTGTTAAACCTGCGCCATCTACTTATATACCATCACACTTGGGACGACGTTGGATTTAAATACCTCAAGGGGACACGAGTACCATCAAATATTAGTGAGTTGAAGAAATTGCAGGTGTTGGAAAAAGTTGAATCAGACGGAAACATTGCAGGACTCATTGGAAGTATGACCCAACTTAGACTGCTTGGCATTACGAATGTGAAAGGAAGTGACGAAATGGACCTATGTGACTCGATTCAAAAGATGAAGCAGCTTCGCAACTTGAGTTTGACGGCAACGAATGCAGATGAACTTCTTAAGGTCGACAAGCTATCTTCACCTCCTCCACATCTTGAAATTGTTTCTTTAGCTGGGAAACTGCACAAAGTACCAGTTTGGTTTTGTTCACTACAAAGCCTCACACATCTCCATCTGCATTGGGCTAAACTTGAAAATGATGAGCTACTACCTCAAATTGAAGCATTGCCATGTTTGGCAAGTCTTGACCTTTTTAATGCCTACAATGGGAAGGAGCTGTACTTCGGCGGAGGCTTTCCTAAGCTTACACGATTGGTTTTGTCTAATCTCCTCTTTTTGAGTAAGATCACTATAGAAAAAGGGGTTATGCCAAATCTCAAGTTTCTATTTCTTAATAGCTGCATTGAATTGAAGACATTGCCACTGGGTATTGAGTACCTTCTTAATCTAAACACATTGGAATTGGTGTATCTTCCAACGCAACTTATAGACTCCATACGAGAAGGAGGTGTGGATCGTCCAAAGGTGCAACACATTCCCAAAATCCACAATTATTACACAACATCATCTGGAAGTACGTCCTATGAAAGCCTTTCCTGTATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

915

Amino Acids

104.51

Weight (kDa)

6.47

Isoelectric Point (pI)

44.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2005
Acc36I ACCTGC 2 cut(s) 1920, 2005
Acc65I GGTACC 1 cut(s) 819
AccB1I GGYRCC 1 cut(s) 819
AccI GTMKAC 2 cut(s) 1377, 2205
AccII CGCG 1 cut(s) 278
AciI CCGC 4 cut(s) 66, 278, 1504, 2427
AclWI GGATC 4 cut(s) 468, 595, 917, 2661
AcsI RAATTY 5 cut(s) 233, 719, 1786, 1820, 1893
AcuI CTGAAG 3 cut(s) 237, 1377, 1629
AcyI GRCGYC 1 cut(s) 328
AfiI CCNNNNNNNGG 2 cut(s) 994, 2406
AflII CTTAAG 1 cut(s) 2198
AflIII ACRYGT 1 cut(s) 246
AjnI CCWGG 1 cut(s) 987
AjuI GAANNNNNNNTTGG 4 cut(s) 745, 777, 1879, 1911
Alw21I GWGCWC 5 cut(s) 495, 898, 1014, 1512, 1647
Alw26I GTCTC 1 cut(s) 1735
AlwI GGATC 4 cut(s) 468, 595, 917, 2661
Ama87I CYCGRG 1 cut(s) 50
AoxI GGCC 2 cut(s) 3, 1473
ApeKI GCWGC 5 cut(s) 256, 1185, 1198, 2152, 2538
ApoI RAATTY 5 cut(s) 233, 719, 1786, 1820, 1893
Asp700I GAANNNNTTC 4 cut(s) 128, 1028, 1425, 1881
Asp718I GGTACC 1 cut(s) 819
AspLEI GCGC 1 cut(s) 1917
AspS9I GGNCC 3 cut(s) 745, 1474, 2122
AsuHPI GGTGA 6 cut(s) 95, 205, 457, 613, 716, 2211
AvaI CYCGRG 1 cut(s) 50
AvaII GGWCC 2 cut(s) 745, 2122
BaeI ACNNNNGTAYC 2 cut(s) 1965, 1998
BanI GGYRCC 1 cut(s) 819
BanII GRGCYC 5 cut(s) 495, 898, 1014, 1512, 1647
BarI GAAGNNNNNNTAC 4 cut(s) 777, 809, 2402, 2434
BauI CACGAG 2 cut(s) 494, 1977
BbsI GAAGAC 7 cut(s) 459, 602, 699, 1137, 1317, 1837, 2558
Bbv12I GWGCWC 5 cut(s) 495, 898, 1014, 1512, 1647
BbvCI CCTCAGC 1 cut(s) 144
BbvI GCAGC 5 cut(s) 268, 1197, 1210, 2164, 2525
BccI CCATC 7 cut(s) 520, 1244, 1319, 1926, 1941, 1993, 2319
BceAI ACGGC 1 cut(s) 2190
BcgI CGANNNNNNTGC 2 cut(s) 638, 672
BciT130I CCWGG 1 cut(s) 989
BciVI GTATCC 1 cut(s) 957
BclI TGATCA 2 cut(s) 85, 711
BcoDI GTCTC 1 cut(s) 1735
BfaI CTAG 6 cut(s) 605, 833, 1478, 1671, 1692, 1715
BfmI CTRYAG 2 cut(s) 1161, 2490
BfrI CTTAAG 1 cut(s) 2198
BfuAI ACCTGC 2 cut(s) 1920, 2005
BfuI GTATCC 1 cut(s) 957
BglII AGATCT 2 cut(s) 19, 1694
BisI GCNGC 5 cut(s) 257, 1186, 1199, 2153, 2539
BlsI GCNGC 5 cut(s) 258, 1187, 1200, 2154, 2540
BmcAI AGTACT 1 cut(s) 1881
Bme1390I CCNGG 1 cut(s) 989
Bme18I GGWCC 2 cut(s) 745, 2122
BmeT110I CYCGRG 1 cut(s) 50
BmgT120I GGNCC 3 cut(s) 745, 1474, 2122
BmiI GGNNCC 5 cut(s) 156, 287, 409, 747, 821
BmrFI CCNGG 1 cut(s) 989
BmrI ACTGGG 1 cut(s) 2573
BmsI GCATC 5 cut(s) 54, 71, 130, 780, 799
BmuI ACTGGG 1 cut(s) 2573
BpiI GAAGAC 7 cut(s) 459, 602, 699, 1137, 1317, 1837, 2558
BplI GAGNNNNNCTC 4 cut(s) 1320, 1352, 1715, 1747
BpmI CTGGAG 1 cut(s) 272
Bpu10I CCTNAGC 3 cut(s) 144, 413, 2439
BpuEI CTTGAG 4 cut(s) 1795, 1952, 2185, 2501
Bsa29I ATCGAT 1 cut(s) 1323
BsaAI YACGTR 1 cut(s) 685
BsaHI GRCGYC 1 cut(s) 328
BsaJI CCNNGG 5 cut(s) 6, 570, 1149, 1734, 1851
BsaWI WCCGGW 2 cut(s) 906, 1390
Bsc4I CCNNNNNNNGG 2 cut(s) 994, 2406
Bse118I RCCGGY 1 cut(s) 74
Bse1I ACTGG 3 cut(s) 786, 2273, 2568
Bse3DI GCAATG 3 cut(s) 2046, 2363, 2555
BseBI CCWGG 1 cut(s) 989
BseCI ATCGAT 1 cut(s) 1323
BseDI CCNNGG 5 cut(s) 6, 570, 1149, 1734, 1851
BseGI GGATG 4 cut(s) 45, 62, 814, 1003
BseLI CCNNNNNNNGG 2 cut(s) 994, 2406
BseMI GCAATG 3 cut(s) 2046, 2363, 2555
BseMII CTCAG 1 cut(s) 135
BseNI ACTGG 3 cut(s) 786, 2273, 2568
BseRI GAGGAG 2 cut(s) 2214, 2459
BseXI GCAGC 5 cut(s) 268, 1197, 1210, 2164, 2525
BseYI CCCAGC 1 cut(s) 2252
BsgI GTGCAG 1 cut(s) 2246
Bsh1236I CGCG 1 cut(s) 278
BshFI GGCC 2 cut(s) 5, 1475
BshNI GGYRCC 1 cut(s) 819
BshVI ATCGAT 1 cut(s) 1323
BsiHKAI GWGCWC 5 cut(s) 495, 898, 1014, 1512, 1647
BsiHKCI CYCGRG 1 cut(s) 50
BsiSI CCGG 3 cut(s) 75, 907, 1391
BslFI GGGAC 4 cut(s) 731, 1141, 1958, 1987
BslI CCNNNNNNNGG 2 cut(s) 994, 2406
BsmAI GTCTC 1 cut(s) 1735
BsmFI GGGAC 4 cut(s) 731, 1141, 1958, 1987
BsmI GAATGC 2 cut(s) 1028, 2188
BsnI GGCC 2 cut(s) 5, 1475
BsoBI CYCGRG 1 cut(s) 50
Bsp1286I GDGCHC 5 cut(s) 495, 898, 1014, 1512, 1647
Bsp1407I TGTACA 1 cut(s) 1179
Bsp19I CCATGG 1 cut(s) 1734
BspACI CCGC 4 cut(s) 66, 278, 1504, 2427
BspANI GGCC 2 cut(s) 5, 1475
BspCNI CTCAG 1 cut(s) 136
BspDI ATCGAT 1 cut(s) 1323
BspFNI CGCG 1 cut(s) 278
BspHI TCATGA 1 cut(s) 1042
BspLI GGNNCC 5 cut(s) 156, 287, 409, 747, 821
BspMI ACCTGC 2 cut(s) 1920, 2005
BspPI GGATC 4 cut(s) 468, 595, 917, 2661
BspT107I GGYRCC 1 cut(s) 819
BspTI CTTAAG 1 cut(s) 2198
BsrDI GCAATG 3 cut(s) 2046, 2363, 2555
BsrFI RCCGGY 1 cut(s) 74
BsrGI TGTACA 1 cut(s) 1179
BsrI ACTGG 3 cut(s) 786, 2273, 2568
BssAI RCCGGY 1 cut(s) 74
BssECI CCNNGG 5 cut(s) 6, 570, 1149, 1734, 1851
BssNI GRCGYC 1 cut(s) 328
BssSI CACGAG 2 cut(s) 494, 1977
BssT1I CCWWGG 3 cut(s) 1149, 1734, 1851
Bst2BI CACGAG 2 cut(s) 494, 1977
Bst2UI CCWGG 1 cut(s) 989
Bst4CI ACNGT 3 cut(s) 653, 670, 1295
Bst6I CTCTTC 1 cut(s) 735
BstACI GRCGYC 1 cut(s) 328
BstAFI CTTAAG 1 cut(s) 2198
BstAPI GCANNNNNTGC 1 cut(s) 2183
BstAUI TGTACA 1 cut(s) 1179
BstBAI YACGTR 1 cut(s) 685
BstC8I GCNNGC 2 cut(s) 1109, 1512
BstDEI CTNAG 5 cut(s) 144, 413, 1247, 2078, 2439
BstDSI CCRYGG 2 cut(s) 570, 1734
BstENI CCTNNNNNAGG 1 cut(s) 992
BstF5I GGATG 4 cut(s) 45, 62, 814, 1003
BstFNI CGCG 1 cut(s) 278
BstHHI GCGC 1 cut(s) 1917
BstMAI GTCTC 1 cut(s) 1735
BstMWI GCNNNNNNNGC 2 cut(s) 1124, 2183
BstNI CCWGG 1 cut(s) 989
BstNSI RCATGY 1 cut(s) 250
BstSCI CCNGG 1 cut(s) 987
BstSFI CTRYAG 2 cut(s) 1161, 2490
BstUI CGCG 1 cut(s) 278
BstV1I GCAGC 5 cut(s) 268, 1197, 1210, 2164, 2525
BstV2I GAAGAC 7 cut(s) 459, 602, 699, 1137, 1317, 1837, 2558
BstX2I RGATCY 3 cut(s) 19, 909, 1694
BstYI RGATCY 3 cut(s) 19, 909, 1694
Bsu15I ATCGAT 1 cut(s) 1323
BsuI GTATCC 1 cut(s) 957
BsuRI GGCC 2 cut(s) 5, 1475
BsuTUI ATCGAT 1 cut(s) 1323
BtgI CCRYGG 2 cut(s) 570, 1734
BtsCI GGATG 4 cut(s) 45, 62, 814, 1003
BtsI GCAGTG 1 cut(s) 1682
BtsIMutI CAGTG 2 cut(s) 1682, 2561
BveI ACCTGC 2 cut(s) 1920, 2005
Cac8I GCNNGC 2 cut(s) 1109, 1512
CciI TCATGA 1 cut(s) 1042
CfoI GCGC 1 cut(s) 1917
Cfr10I RCCGGY 1 cut(s) 74
Cfr13I GGNCC 3 cut(s) 745, 1474, 2122
ClaI ATCGAT 1 cut(s) 1323
CseI GACGC 1 cut(s) 317
CspCI CAANNNNNGTGG 2 cut(s) 589, 624
DdeI CTNAG 5 cut(s) 144, 413, 1247, 2078, 2439
DraI TTTAAA 3 cut(s) 211, 1785, 1960
Eam1104I CTCTTC 1 cut(s) 735
EarI CTCTTC 1 cut(s) 735
EciI GGCGGA 2 cut(s) 55, 2442
Ecl136II GAGCTC 5 cut(s) 493, 896, 1012, 1510, 1645
Eco130I CCWWGG 3 cut(s) 1149, 1734, 1851
Eco24I GRGCYC 5 cut(s) 495, 898, 1014, 1512, 1647
Eco32I GATATC 2 cut(s) 850, 876
Eco47I GGWCC 2 cut(s) 745, 2122
Eco53kI GAGCTC 5 cut(s) 493, 896, 1012, 1510, 1645
Eco57I CTGAAG 3 cut(s) 237, 1377, 1629
Eco88I CYCGRG 1 cut(s) 50
EcoICRI GAGCTC 5 cut(s) 493, 896, 1012, 1510, 1645
EcoNI CCTNNNNNAGG 1 cut(s) 992
EcoO109I RGGNCCY 2 cut(s) 745, 1474
EcoRII CCWGG 1 cut(s) 987
EcoRV GATATC 2 cut(s) 850, 876
EcoT14I CCWWGG 3 cut(s) 1149, 1734, 1851
EcoT22I ATGCAT 1 cut(s) 661
EcoT38I GRGCYC 5 cut(s) 495, 898, 1014, 1512, 1647
ErhI CCWWGG 3 cut(s) 1149, 1734, 1851
FaqI GGGAC 4 cut(s) 731, 1141, 1958, 1987
FauI CCCGC 2 cut(s) 271, 1497
FbaI TGATCA 2 cut(s) 85, 711
FblI GTMKAC 2 cut(s) 1377, 2205
Fnu4HI GCNGC 5 cut(s) 257, 1186, 1199, 2153, 2539
FokI GGATG 4 cut(s) 32, 49, 821, 1010
FriOI GRGCYC 5 cut(s) 495, 898, 1014, 1512, 1647
Fsp4HI GCNGC 5 cut(s) 257, 1186, 1199, 2153, 2539
FspBI CTAG 6 cut(s) 605, 833, 1478, 1671, 1692, 1715
GlaI GCGC 1 cut(s) 1916
GluI GCNGC 5 cut(s) 257, 1186, 1199, 2153, 2539
GsaI CCCAGC 1 cut(s) 2256
GsuI CTGGAG 1 cut(s) 272
HaeIII GGCC 2 cut(s) 5, 1475
HapII CCGG 3 cut(s) 75, 907, 1391
HgaI GACGC 1 cut(s) 317
HhaI GCGC 1 cut(s) 1917
Hin1I GRCGYC 1 cut(s) 328
Hin6I GCGC 1 cut(s) 1915
HinP1I GCGC 1 cut(s) 1915
HincII GTYRAC 3 cut(s) 229, 1378, 2206
HindII GTYRAC 3 cut(s) 229, 1378, 2206
HindIII AAGCTT 2 cut(s) 706, 2441
HpaII CCGG 3 cut(s) 75, 907, 1391
HphI GGTGA 6 cut(s) 95, 205, 457, 613, 716, 2211
Hpy166II GTNNAC 6 cut(s) 229, 1058, 1180, 1378, 2206, 2288
Hpy188I TCNGA 4 cut(s) 1084, 1458, 1642, 2038
Hpy8I GTNNAC 6 cut(s) 229, 1058, 1180, 1378, 2206, 2288
Hpy99I CGWCG 4 cut(s) 1382, 1434, 1590, 1952
HpyCH4III ACNGT 3 cut(s) 653, 670, 1295
HpyCH4IV ACGT 4 cut(s) 179, 684, 1950, 2717
HpyF10VI GCNNNNNNNGC 2 cut(s) 1124, 2183
HpyF3I CTNAG 5 cut(s) 144, 413, 1247, 2078, 2439
HpySE526I ACGT 4 cut(s) 179, 684, 1950, 2717
Hsp92I GRCGYC 1 cut(s) 328
HspAI GCGC 1 cut(s) 1915
KpnI GGTACC 1 cut(s) 823
Ksp22I TGATCA 2 cut(s) 85, 711
LmnI GCTCC 9 cut(s) 109, 291, 1009, 1170, 1507, 1650, 1749, 1810, 2413
Lsp1109I GCAGC 5 cut(s) 268, 1197, 1210, 2164, 2525
LweI GCATC 5 cut(s) 54, 71, 130, 780, 799
MaeI CTAG 6 cut(s) 605, 833, 1478, 1671, 1692, 1715
MaeII ACGT 4 cut(s) 179, 684, 1950, 2717
MaeIII GTNAC 7 cut(s) 184, 345, 1524, 1576, 1666, 2111, 2129
MfeI CAATTG 2 cut(s) 1119, 1271
MflI RGATCY 3 cut(s) 19, 909, 1694
MhlI GDGCHC 5 cut(s) 495, 898, 1014, 1512, 1647
MlyI GAGTC 4 cut(s) 1163, 2049, 2126, 2624
MmeI TCCRAC 3 cut(s) 1933, 2001, 2639
Mph1103I ATGCAT 1 cut(s) 661
MroXI GAANNNNTTC 4 cut(s) 128, 1028, 1425, 1881
MslI CAYNNNNRTG 1 cut(s) 2368
MspA1I CMGCKG 1 cut(s) 1201
MspCI CTTAAG 1 cut(s) 2198
MspI CCGG 3 cut(s) 75, 907, 1391
MspR9I CCNGG 1 cut(s) 989
MunI CAATTG 2 cut(s) 1119, 1271
Mva1269I GAATGC 2 cut(s) 1028, 2188
MvaI CCWGG 1 cut(s) 989
MvnI CGCG 1 cut(s) 278
MwoI GCNNNNNNNGC 2 cut(s) 1124, 2183
NcoI CCATGG 1 cut(s) 1734
NlaIV GGNNCC 5 cut(s) 156, 287, 409, 747, 821
NmuCI GTSAC 4 cut(s) 1524, 1666, 2111, 2129
NsiI ATGCAT 1 cut(s) 661
NspI RCATGY 1 cut(s) 250
PaeR7I CTCGAG 1 cut(s) 50
PagI TCATGA 1 cut(s) 1042
PaqCI CACCTGC 1 cut(s) 2005
PciI ACATGT 1 cut(s) 246
PctI GAATGC 2 cut(s) 1028, 2188
PdmI GAANNNNTTC 4 cut(s) 128, 1028, 1425, 1881
PfeI GAWTC 6 cut(s) 273, 313, 388, 1070, 2033, 2137
PfoI TCCNGGA 1 cut(s) 987
PkrI GCNGC 5 cut(s) 258, 1187, 1200, 2154, 2540
PleI GAGTC 4 cut(s) 1162, 2049, 2126, 2624
PpsI GAGTC 4 cut(s) 1162, 2049, 2126, 2624
Ppu21I YACGTR 1 cut(s) 685
PpuMI RGGWCCY 1 cut(s) 745
PscI ACATGT 1 cut(s) 246
Psp124BI GAGCTC 5 cut(s) 495, 898, 1014, 1512, 1647
Psp5II RGGWCCY 1 cut(s) 745
Psp6I CCWGG 1 cut(s) 987
PspFI CCCAGC 1 cut(s) 2252
PspGI CCWGG 1 cut(s) 987
PspN4I GGNNCC 5 cut(s) 156, 287, 409, 747, 821
PspPI GGNCC 3 cut(s) 745, 1474, 2122
PspPPI RGGWCCY 1 cut(s) 745
PsuI RGATCY 3 cut(s) 19, 909, 1694
PvuII CAGCTG 1 cut(s) 1201
RseI CAYNNNNRTG 1 cut(s) 2368
SacI GAGCTC 5 cut(s) 495, 898, 1014, 1512, 1647
SalI GTCGAC 2 cut(s) 1376, 2204
SatI GCNGC 5 cut(s) 257, 1186, 1199, 2153, 2539
Sau96I GGNCC 3 cut(s) 745, 1474, 2122
ScaI AGTACT 1 cut(s) 1881
SchI GAGTC 4 cut(s) 1163, 2049, 2126, 2624
ScrFI CCNGG 1 cut(s) 989
SduI GDGCHC 5 cut(s) 495, 898, 1014, 1512, 1647
SfaNI GCATC 5 cut(s) 54, 71, 130, 780, 799
SfcI CTRYAG 2 cut(s) 1161, 2490
Sfr274I CTCGAG 1 cut(s) 50
SinI GGWCC 2 cut(s) 745, 2122
SlaI CTCGAG 1 cut(s) 50
SmiI ATTTAAAT 2 cut(s) 1785, 1960
SmiMI CAYNNNNRTG 1 cut(s) 2368
SmlI CTYRAG 6 cut(s) 50, 1774, 1967, 2164, 2198, 2516
SmoI CTYRAG 6 cut(s) 50, 1774, 1967, 2164, 2198, 2516
SsiI CCGC 4 cut(s) 66, 278, 1504, 2427
SspI AATATT 1 cut(s) 1993
SspMI CTAG 6 cut(s) 605, 833, 1478, 1671, 1692, 1715
SstI GAGCTC 5 cut(s) 495, 898, 1014, 1512, 1647
StyD4I CCNGG 1 cut(s) 987
StyI CCWWGG 3 cut(s) 1149, 1734, 1851
SwaI ATTTAAAT 2 cut(s) 1785, 1960
TaaI ACNGT 3 cut(s) 653, 670, 1295
TaiI ACGT 4 cut(s) 182, 687, 1953, 2720
TaqI TCGA 9 cut(s) 51, 648, 925, 976, 1254, 1323, 1377, 2135, 2205
TatI WGTACW 5 cut(s) 829, 1179, 1290, 1879, 2418
TfiI GAWTC 6 cut(s) 273, 313, 388, 1070, 2033, 2137
TscAI CASTG 2 cut(s) 1689, 2568
TseFI GTSAC 4 cut(s) 1524, 1666, 2111, 2129
TseI GCWGC 5 cut(s) 256, 1185, 1198, 2152, 2538
Tsp45I GTSAC 4 cut(s) 1524, 1666, 2111, 2129
TspDTI ATGAA 9 cut(s) 72, 137, 226, 466, 642, 1276, 2162, 2205, 2739
TspGWI ACGGA 4 cut(s) 179, 559, 1637, 2055
TspRI CASTG 2 cut(s) 1689, 2568
Vha464I CTTAAG 1 cut(s) 2198
VpaK11BI GGWCC 2 cut(s) 745, 2122
XagI CCTNNNNNAGG 1 cut(s) 992
XapI RAATTY 5 cut(s) 233, 719, 1786, 1820, 1893
XbaI TCTAGA 2 cut(s) 1691, 1714
XceI RCATGY 1 cut(s) 250
XcmI CCANNNNNNNNNTGG 1 cut(s) 315
XhoI CTCGAG 1 cut(s) 50
XmiI GTMKAC 2 cut(s) 1377, 2205
XmnI GAANNNNTTC 4 cut(s) 128, 1028, 1425, 1881
XspI CTAG 6 cut(s) 605, 833, 1478, 1671, 1692, 1715
ZrmI AGTACT 1 cut(s) 1881
Zsp2I ATGCAT 1 cut(s) 661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.