Prupe.8G009500_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000110
Physical Location & Seq
Forward (+)
718796 .. 720240
1445 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G009500.1

Sequence Viewer

Length: 1371 bp
ATGGCCTCAGCTGCAACCGATCTCTTGATTGGCAAAGTTGTAGGCATTCTTGAGAGCGAAGCATCCTCCATAGTAGGTGTTCGTGATCAAGTTGATGAGATTAAGCAAGAGCTTATAAGCATGAAATCCTTCCTAAAGGATGCTGAGGGGAAGAAACAGCAGACAGAAGGAGAGGAGACATGGGTAGCTAGAGTGAGAGATTTGGCCTATGAGGTTGAAGATATCATTGATAAGTTCATGTACCACATGCATGAGCAGCAGAGTGGGGGTAGATTTTCAAGCTTGCTCCGTAAAACCATTTGCTTTCCAAACCAATGGAACAGAGGTCGATTTGCAAGGTGGCTCCACAAAACCAGACACAACCCAAAGTATCTTTGGCATAGAAGTCGATTTACAAGGTGGCTCCACAAAACCATTCACATTCCAAAGTATAGGGGTCGATTTGCAAGCTGCTTCCACAAAGCCATTCACATGCCAAAGAAACTTGGTATTGGCGTCAAATTGGCAAAAAGAACAAGTTCAGATGACATTCAAAAATGGGTGAAAAACCAAGCAGAGTCTTCCCTTTTTATTAAGGAAGACGAACTTGTGGGGATTGAAGACAAGAATCAAATATTGATGGGATGGCTGATGAACGGAGAGCAACAACAAGCGGTTATCTCTGTGGTCGGAATGGGAGGATCAGGGAAGACAACTCTAGTTGCAAAAACCTTCACCAGTGAAAGTGTGAAGAGACATTTCAGCTGTTATGCGCGGATTACGGTTTCCCTAAGTTATGTGATTGAAGATTTGTTTAGAAGCTTGATCGAGGAAGTCCACCAAGCAACAAAGGAAGAGGTCCCTGCAGCTGCAGACTTAAATTCCATGAGCGATAGGGAATTGCTACATATACTCGTAACCTACTTGGAGTTTAGAAGGTACCTAGTTGTATCGAATGACGTGTGGGATATAAAACTTTTGAAAGAAATGAGTATAGCACTTCCAAATAGACAGCTTGGAAGTCGAATCATGCTCACTACTCGGAAAGAAGACATAGCCTTCTATTCTTTTGGAGTAGAAAGCCATGTTCATCGTATTCAACCGTTGGAAAAGAATGAGGCTTGGGAGCTCTTCAGTAAGAAAGCATTCACAACTTACCAGAATAAACGTTGTCCACCAGAGCTTGAATCATCAGCTCGGGAACTTTTGGGGAAATGTAAAGGCCTACCCCTAGCAATCGTAGCTTTAGGTGGTCTTATGTCTTCCAAGGAGTCATCTACGGAGTGGAGAAAAGTCTGCAACAGCATAAATTGGCATCTAATAAATGATCATTTCCTAGAACCTGTGAAGACATCTTGTTTCTCAGTTTCAACGATTTGCCATATCGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

457

Amino Acids

52.38

Weight (kDa)

9.05

Isoelectric Point (pI)

56.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 116
Acc65I GGTACC 1 cut(s) 918
AccB1I GGYRCC 1 cut(s) 918
AccII CGCG 1 cut(s) 754
AciI CCGC 2 cut(s) 653, 754
AclI AACGTT 1 cut(s) 1147
AclWI GGATC 1 cut(s) 688
AcsI RAATTY 1 cut(s) 859
AcuI CTGAAG 1 cut(s) 1096
AcyI GRCGYC 1 cut(s) 495
AfaI GTAC 2 cut(s) 242, 920
AflIII ACRYGT 1 cut(s) 939
AgsI TTSAA 9 cut(s) 218, 279, 533, 599, 785, 961, 1079, 1166, 1350
AjiI CACGTC 1 cut(s) 940
Alw21I GWGCWC 1 cut(s) 1110
Alw26I GTCTC 2 cut(s) 170, 727
AlwI GGATC 1 cut(s) 688
Ama87I CYCGRG 1 cut(s) 1176
AoxI GGCC 3 cut(s) 3, 204, 1201
ApeKI GCWGC 5 cut(s) 11, 256, 450, 845, 848
ApoI RAATTY 1 cut(s) 859
Asp700I GAANNNNTTC 3 cut(s) 128, 517, 1124
Asp718I GGTACC 1 cut(s) 918
AspLEI GCGC 1 cut(s) 754
AspS9I GGNCC 1 cut(s) 838
AsuHPI GGTGA 2 cut(s) 553, 706
AvaI CYCGRG 1 cut(s) 1176
AvaII GGWCC 1 cut(s) 838
BanI GGYRCC 1 cut(s) 918
BanII GRGCYC 1 cut(s) 1110
BarI GAAGNNNNNNTAC 2 cut(s) 376, 408
BbsI GAAGAC 7 cut(s) 552, 585, 606, 695, 1035, 1233, 1334
Bbv12I GWGCWC 1 cut(s) 1110
BbvCI CCTCAGC 2 cut(s) 7, 144
BbvI GCAGC 4 cut(s) 268, 437, 835, 857
BccI CCATC 2 cut(s) 613, 618
BcgI CGANNNNNNTGC 2 cut(s) 368, 402
BclI TGATCA 2 cut(s) 85, 1306
BcoDI GTCTC 2 cut(s) 170, 727
BfaI CTAG 5 cut(s) 189, 698, 923, 1211, 1316
BfmI CTRYAG 2 cut(s) 843, 849
BisI GCNGC 5 cut(s) 12, 257, 451, 846, 849
BlsI GCNGC 5 cut(s) 13, 258, 452, 847, 850
Bme18I GGWCC 1 cut(s) 838
BmeT110I CYCGRG 1 cut(s) 1176
BmgBI CACGTC 1 cut(s) 940
BmgT120I GGNCC 1 cut(s) 838
BmiI GGNNCC 4 cut(s) 344, 404, 840, 920
BmsI GCATC 3 cut(s) 71, 130, 1303
BpiI GAAGAC 7 cut(s) 552, 585, 606, 695, 1035, 1233, 1334
Bpu10I CCTNAGC 2 cut(s) 7, 144
BpuEI CTTGAG 1 cut(s) 71
BsaHI GRCGYC 1 cut(s) 495
BsaJI CCNNGG 1 cut(s) 1245
Bse1I ACTGG 1 cut(s) 717
BseDI CCNNGG 1 cut(s) 1245
BseGI GGATG 3 cut(s) 62, 145, 629
BseMII CTCAG 3 cut(s) 21, 135, 1356
BseNI ACTGG 1 cut(s) 717
BseRI GAGGAG 1 cut(s) 188
BseXI GCAGC 4 cut(s) 268, 437, 835, 857
Bsh1236I CGCG 1 cut(s) 754
BshFI GGCC 3 cut(s) 5, 206, 1203
BshNI GGYRCC 1 cut(s) 918
BsiHKAI GWGCWC 1 cut(s) 1110
BsiHKCI CYCGRG 1 cut(s) 1176
BslFI GGGAC 1 cut(s) 824
BsmAI GTCTC 2 cut(s) 170, 727
BsmFI GGGAC 1 cut(s) 824
BsmI GAATGC 2 cut(s) 45, 1124
BsnI GGCC 3 cut(s) 5, 206, 1203
BsoBI CYCGRG 1 cut(s) 1176
Bsp1286I GDGCHC 1 cut(s) 1110
Bsp143I GATC 5 cut(s) 19, 85, 680, 804, 1306
BspACI CCGC 2 cut(s) 653, 754
BspANI GGCC 3 cut(s) 5, 206, 1203
BspCNI CTCAG 3 cut(s) 20, 136, 1355
BspFNI CGCG 1 cut(s) 754
BspLI GGNNCC 4 cut(s) 344, 404, 840, 920
BspMAI CTGCAG 2 cut(s) 847, 853
BspPI GGATC 1 cut(s) 688
BspQI GCTCTTC 1 cut(s) 1115
BspT107I GGYRCC 1 cut(s) 918
BsrI ACTGG 1 cut(s) 717
BssECI CCNNGG 1 cut(s) 1245
BssMI GATC 5 cut(s) 19, 85, 680, 804, 1306
BssNI GRCGYC 1 cut(s) 495
BssT1I CCWWGG 1 cut(s) 1245
Bst4CI ACNGT 2 cut(s) 763, 1083
Bst6I CTCTTC 3 cut(s) 725, 828, 1115
BstACI GRCGYC 1 cut(s) 495
BstC8I GCNNGC 2 cut(s) 284, 448
BstDEI CTNAG 4 cut(s) 7, 144, 770, 1342
BstF5I GGATG 3 cut(s) 62, 145, 629
BstFNI CGCG 1 cut(s) 754
BstHHI GCGC 1 cut(s) 754
BstKTI GATC 5 cut(s) 22, 88, 683, 807, 1309
BstMAI GTCTC 2 cut(s) 170, 727
BstMBI GATC 5 cut(s) 19, 85, 680, 804, 1306
BstMWI GCNNNNNNNGC 3 cut(s) 11, 256, 1220
BstNSI RCATGY 2 cut(s) 250, 475
BstSFI CTRYAG 2 cut(s) 843, 849
BstUI CGCG 1 cut(s) 754
BstV1I GCAGC 4 cut(s) 268, 437, 835, 857
BstV2I GAAGAC 7 cut(s) 552, 585, 606, 695, 1035, 1233, 1334
BstXI CCANNNNNNTGG 1 cut(s) 315
BsuRI GGCC 3 cut(s) 5, 206, 1203
BtrI CACGTC 1 cut(s) 940
BtsCI GGATG 3 cut(s) 62, 145, 629
BtsIMutI CAGTG 1 cut(s) 724
Cac8I GCNNGC 2 cut(s) 284, 448
CfoI GCGC 1 cut(s) 754
Cfr13I GGNCC 1 cut(s) 838
CseI GACGC 1 cut(s) 484
Csp6I GTAC 2 cut(s) 241, 919
CviAII CATG 9 cut(s) 121, 180, 238, 247, 251, 472, 865, 1009, 1064
CviQI GTAC 2 cut(s) 241, 919
DdeI CTNAG 4 cut(s) 7, 144, 770, 1342
DpnI GATC 5 cut(s) 21, 87, 682, 806, 1308
DpnII GATC 5 cut(s) 19, 85, 680, 804, 1306
Eam1104I CTCTTC 3 cut(s) 725, 828, 1115
EarI CTCTTC 3 cut(s) 725, 828, 1115
Ecl136II GAGCTC 1 cut(s) 1108
Eco130I CCWWGG 1 cut(s) 1245
Eco147I AGGCCT 1 cut(s) 1203
Eco24I GRGCYC 1 cut(s) 1110
Eco32I GATATC 1 cut(s) 223
Eco47I GGWCC 1 cut(s) 838
Eco53kI GAGCTC 1 cut(s) 1108
Eco57I CTGAAG 1 cut(s) 1096
Eco88I CYCGRG 1 cut(s) 1176
EcoICRI GAGCTC 1 cut(s) 1108
EcoO109I RGGNCCY 1 cut(s) 838
EcoRV GATATC 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 1245
EcoT22I ATGCAT 1 cut(s) 252
EcoT38I GRGCYC 1 cut(s) 1110
ErhI CCWWGG 1 cut(s) 1245
FaeI CATG 9 cut(s) 124, 183, 241, 250, 254, 475, 868, 1012, 1067
FalI AAGNNNNNCTT 2 cut(s) 570, 602
FaqI GGGAC 1 cut(s) 824
FatI CATG 9 cut(s) 120, 179, 237, 246, 250, 471, 864, 1008, 1063
FbaI TGATCA 2 cut(s) 85, 1306
Fnu4HI GCNGC 5 cut(s) 12, 257, 451, 846, 849
FokI GGATG 3 cut(s) 49, 152, 636
FriOI GRGCYC 1 cut(s) 1110
Fsp4HI GCNGC 5 cut(s) 12, 257, 451, 846, 849
FspBI CTAG 5 cut(s) 189, 698, 923, 1211, 1316
GlaI GCGC 1 cut(s) 753
GluI GCNGC 5 cut(s) 12, 257, 451, 846, 849
HaeIII GGCC 3 cut(s) 5, 206, 1203
HgaI GACGC 1 cut(s) 484
HhaI GCGC 1 cut(s) 754
Hin1I GRCGYC 1 cut(s) 495
Hin1II CATG 9 cut(s) 124, 183, 241, 250, 254, 475, 868, 1012, 1067
Hin6I GCGC 1 cut(s) 752
HinP1I GCGC 1 cut(s) 752
HindIII AAGCTT 2 cut(s) 280, 799
HinfI GANTC 5 cut(s) 557, 607, 1005, 1166, 1250
HphI GGTGA 2 cut(s) 553, 706
Hpy166II GTNNAC 2 cut(s) 817, 1154
Hpy188I TCNGA 3 cut(s) 523, 671, 1023
Hpy188III TCNNGA 4 cut(s) 25, 50, 83, 1178
Hpy8I GTNNAC 2 cut(s) 817, 1154
HpyAV CCTTC 5 cut(s) 139, 161, 721, 909, 1048
HpyCH4III ACNGT 2 cut(s) 763, 1083
HpyCH4IV ACGT 2 cut(s) 939, 1147
HpyCH4V TGCA 8 cut(s) 14, 250, 335, 446, 704, 845, 851, 1278
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 256, 1220
HpyF3I CTNAG 4 cut(s) 7, 144, 770, 1342
HpySE526I ACGT 2 cut(s) 939, 1147
Hsp92I GRCGYC 1 cut(s) 495
Hsp92II CATG 9 cut(s) 124, 183, 241, 250, 254, 475, 868, 1012, 1067
HspAI GCGC 1 cut(s) 752
KpnI GGTACC 1 cut(s) 922
Ksp22I TGATCA 2 cut(s) 85, 1306
Kzo9I GATC 5 cut(s) 19, 85, 680, 804, 1306
LguI GCTCTTC 1 cut(s) 1115
LmnI GCTCC 4 cut(s) 291, 348, 408, 1105
LpnPI CCDG 7 cut(s) 367, 669, 730, 855, 1151, 1170, 1335
Lsp1109I GCAGC 4 cut(s) 268, 437, 835, 857
LweI GCATC 3 cut(s) 71, 130, 1303
MaeI CTAG 5 cut(s) 189, 698, 923, 1211, 1316
MaeII ACGT 2 cut(s) 939, 1147
MaeIII GTNAC 1 cut(s) 895
MalI GATC 5 cut(s) 21, 87, 682, 806, 1308
MboI GATC 5 cut(s) 19, 85, 680, 804, 1306
MhlI GDGCHC 1 cut(s) 1110
MluCI AATT 4 cut(s) 500, 859, 878, 1288
MlyI GAGTC 2 cut(s) 566, 1259
MmeI TCCRAC 2 cut(s) 649, 1065
Mph1103I ATGCAT 1 cut(s) 252
MroXI GAANNNNTTC 3 cut(s) 128, 517, 1124
MseI TTAA 3 cut(s) 102, 573, 857
MslI CAYNNNNRTG 2 cut(s) 249, 470
MspA1I CMGCKG 3 cut(s) 11, 744, 848
Mva1269I GAATGC 2 cut(s) 45, 1124
MvnI CGCG 1 cut(s) 754
MwoI GCNNNNNNNGC 3 cut(s) 11, 256, 1220
NdeII GATC 5 cut(s) 19, 85, 680, 804, 1306
NlaIII CATG 9 cut(s) 124, 183, 241, 250, 254, 475, 868, 1012, 1067
NlaIV GGNNCC 4 cut(s) 344, 404, 840, 920
NsiI ATGCAT 1 cut(s) 252
NspI RCATGY 2 cut(s) 250, 475
PceI AGGCCT 1 cut(s) 1203
PciSI GCTCTTC 1 cut(s) 1115
PctI GAATGC 2 cut(s) 45, 1124
PdmI GAANNNNTTC 3 cut(s) 128, 517, 1124
PfeI GAWTC 3 cut(s) 607, 1005, 1166
PkrI GCNGC 5 cut(s) 13, 258, 452, 847, 850
PleI GAGTC 2 cut(s) 565, 1258
PpsI GAGTC 2 cut(s) 565, 1258
PpuMI RGGWCCY 1 cut(s) 838
PsiI TTATAA 1 cut(s) 116
Psp124BI GAGCTC 1 cut(s) 1110
Psp1406I AACGTT 1 cut(s) 1147
Psp5II RGGWCCY 1 cut(s) 838
PspN4I GGNNCC 4 cut(s) 344, 404, 840, 920
PspPI GGNCC 1 cut(s) 838
PspPPI RGGWCCY 1 cut(s) 838
PstI CTGCAG 2 cut(s) 847, 853
PvuII CAGCTG 3 cut(s) 11, 744, 848
RsaI GTAC 2 cut(s) 242, 920
RsaNI GTAC 2 cut(s) 241, 919
RseI CAYNNNNRTG 2 cut(s) 249, 470
SacI GAGCTC 1 cut(s) 1110
SapI GCTCTTC 1 cut(s) 1115
SaqAI TTAA 3 cut(s) 102, 573, 857
SatI GCNGC 5 cut(s) 12, 257, 451, 846, 849
Sau3AI GATC 5 cut(s) 19, 85, 680, 804, 1306
Sau96I GGNCC 1 cut(s) 838
SchI GAGTC 2 cut(s) 566, 1259
SduI GDGCHC 1 cut(s) 1110
SfaNI GCATC 3 cut(s) 71, 130, 1303
SfcI CTRYAG 2 cut(s) 843, 849
SinI GGWCC 1 cut(s) 838
SmiMI CAYNNNNRTG 2 cut(s) 249, 470
SmlI CTYRAG 1 cut(s) 50
SmoI CTYRAG 1 cut(s) 50
Sse9I AATT 4 cut(s) 500, 859, 878, 1288
SseBI AGGCCT 1 cut(s) 1203
SsiI CCGC 2 cut(s) 653, 754
SspI AATATT 1 cut(s) 615
SspMI CTAG 5 cut(s) 189, 698, 923, 1211, 1316
SstI GAGCTC 1 cut(s) 1110
StuI AGGCCT 1 cut(s) 1203
StyI CCWWGG 1 cut(s) 1245
TaaI ACNGT 2 cut(s) 763, 1083
TaiI ACGT 2 cut(s) 942, 1150
TaqI TCGA 7 cut(s) 328, 388, 439, 807, 932, 1003, 1365
TasI AATT 4 cut(s) 500, 859, 878, 1288
TfiI GAWTC 3 cut(s) 607, 1005, 1166
Tru1I TTAA 3 cut(s) 102, 573, 857
Tru9I TTAA 3 cut(s) 102, 573, 857
TscAI CASTG 1 cut(s) 724
TseI GCWGC 5 cut(s) 11, 256, 450, 845, 848
TspDTI ATGAA 4 cut(s) 137, 226, 647, 1058
TspGWI ACGGA 3 cut(s) 278, 651, 1274
TspRI CASTG 1 cut(s) 724
VpaK11BI GGWCC 1 cut(s) 838
XapI RAATTY 1 cut(s) 859
XceI RCATGY 2 cut(s) 250, 475
XcmI CCANNNNNNNNNTGG 1 cut(s) 372
XmnI GAANNNNTTC 3 cut(s) 128, 517, 1124
XspI CTAG 5 cut(s) 189, 698, 923, 1211, 1316
Zsp2I ATGCAT 1 cut(s) 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.