Prupe.6G199100_v2.0.a1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000110
Physical Location & Seq
Forward (+)
20576144 .. 20579444
3301 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G199100.1

Sequence Viewer

Length: 2763 bp
ATGTTTTTTTTGTTTAGGCTGATACGAAAGAAGGCCATTATGGCGACAGCCACAACAGACCTCTTGATCGGCAAAGTTGTAGCCATTCTTGAGAACGAAGCAGCCTCCATAGCTGGTGTTGGTGATCAAGTTGATGAGATTAAGCAGGAGCTGGTCTTCATGAAGTCCTTCTTGGAGGATGTCGACGGCAAGAAAGCGCACACACAAGTAGAGAAAGCGTGGGTCGCAAGCGTTCGAGACTTGGCCTATGATGTTGAAGACATCATTGATGAGTTCATGTATCACGTGTACGAGCAGGAAAGCGGAGGCCGATTTGTGAGATGGATCAACAAAACCATTCACTTTCCAAAGAAGCTTTGGTATAAGGGAAGAATAGCGAACAAGTTAGAGAGAATCACCAGAACGATCAAAGCCTTTCCAGAGAGAAATCAGAGATATGTTCTTGTTTTTTCTTTAGAAGGAAAAAGTACTTCTGAGGATGTTCACAAATGGATGCAGAACAAAGCGGAGGCTTCTCTTTTCCATAAGGAAGATGAACTTGTCGGGATTGAAGGCAAGAAGCAAATGTTAATGGGATGGCTGATGGATGAAGGGAAGCACCAAACTGTTGTGTCCGTGGTCGGGATGGGAGGATCAGGGAAGACAACTCTAGTTGCAAGGACCTTCACTGACGACATTGTGAAGAGCCATTTCGAGTGTTATGCATGGATTACCGTTTCACAGTCTTATGTGATTGAAGACTTGTTTAGAAGATTGATCAAAGAATTTTACCAAGCAAGGAAGGAAGAGGTTAAGGCAGACTTGAATTCCATGAGTTATAGAGAATTGCTAGAGATTTTGGTGAAATACTTGGAGGCTAAAAGGTATCTGGTTGTGTTGGATGACGTGTGGGATATCAAACTTTGGGAAGAAATAAGGTTATCATTTCCAGATAAACAACTTGGAAGTCGTGTCATGCTTACAACTCGAAGAGAAGACATAGCATCCTCTGTTTTCGGAGTTGAAAGCCATGTGCATCGGATTCAACGATTGGAAACCATTGATGCATGGGAGCTCTTTTGCATGAAAGCATTCTCAAGTTATCATAACAAATCCTGTTCACCCGAACTTCAGCCTTTAGCTCGGGAAATCGTGGAAAAGTGTGAAGGCCTTCCTTTGGCGATCGTGGCCTTAAGTGGTCTTATGTCTTCTAAGAAGACATTTTCAGAGTGGAGCCAAGTCTGCAACAGCTTAAATTGGTATCTGGCGAACAATTCTTTGCTGGAACCTATGAAGAGCATCTTGTTGCTTAGTTTCAATGATTTGCCATATCGGTTGAAGCAATGTTTTCTTTATTGTTGCCTTTTCCCAGAAGATTATTTGATCGTGAATAACAAGCTCATTAGATTGTGGATTGCTGAAGGATTTGTTGAACATGTGAAAGGGTTCACAACAGAACAAGTTGCAGAGAGCTATCTTATGGAGCTCATTTTTCGAAGCATGATACAAGAGAGGCATTACGACACGGAACCAGCATGTAAGATGCATGATCTTATGCGAGAGCTTGCTTTGTCCATTGCAGCAGAAGAAAAGTTTTGTGCTGCATATGATGGGAGCGAAATAATAACTGAAGAAATTGGAGCCATTCGCTTGTCAATGCAAACTACTAATGGAGAAATTGAACAACGCACAGGTATGTCACGCCTTCGTTCTTTTCTTATCTTTCCCACGGGCATATTCTCGTTCTCTTTTTCAAAGACATCGCCTTTCGAATTTAAATTCTTGAGGGTTCTAGATATGGAGGCCGTCCCAGTTGACATTTTGCCAGATTACGTAATGTATTTATTCAGTTTAAGATATTTAAGTTTGAGAAGAACTCGGATCAAGGAGCTTCCAGAATCCATTGGGCAGCTCCGCAACCTTCAAAGCTTGGACATCAGGGAGACAAATATAGAGGCACTTCCAAGGGGCATTTCAAAATTGCTTAACTTGCGTCATCTACTTATGAATCGTTCCACACGTGATTATAAGATCTTCAGAAACCTCATTGGGATGAAAGCACCATCAAATATTAACATGTTGAAATTACAAGCTTTGTCATTTATTGAATCAGAAGGAAATATTCTTAGACTTATTGGAAAGATGACCCAGCTGACGACCCTTGGCATTACAAATGTCAAAGCAAAAGACGAGAAGGACCTATGTGCCTCACTCCAAGAAATGAAGGTCCTTTGCCTCTTGGATTTACGGGCAGCGAATGAAGAGGAATTTCTTCAAGTTGACGCGTTATCTTCTCCACCTCCCCTGCTTGACAGACTTTTTTTGTCAGGGAAACTGGAAAAGGTACCGCATTGGTTTTGTTCACTCAAGTCGCTCACATTTCTGGGCCTGCGTTGGTCTAAACTTGAAGAAGATTTATTGCCTCACATCGAAGCATTGCCGTCTCTGAGATGGCTTTGCCTTAACGATTCCTATGTAGGGACAGAGATGTGTTTCAGAAGAGGTTTCGTAAAGCTTAGATATTTGGAGTTGTTTGGTTTCTCATTGTTGAATAAGGTAACTATAGAAAAAGGGGCGATGCCAAATCTTGAGTTCTTGAGCATTAAAAGATGCTCTAGTTTAGTGGCATTGCCTCAGGGTTTTGAATACCTTACTAAACTAGAAGGATACGGATTTGAGAATGTCTCAGAGCAACTTATAGAGTCCATACAAGAAGGAGGTGCGGATCATCCAAAGGTGCAACACTTGCGTCCGAAATATAAAAACAAGAAGTCCAAGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

921

Amino Acids

106.3

Weight (kDa)

7.25

Isoelectric Point (pI)

53.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2007
Acc65I GGTACC 1 cut(s) 2323
AccB1I GGYRCC 1 cut(s) 2323
AccI GTMKAC 1 cut(s) 183
AccII CGCG 1 cut(s) 2264
AciI CCGC 5 cut(s) 303, 506, 1894, 2327, 2702
AclWI GGATC 4 cut(s) 332, 640, 1868, 2712
AcsI RAATTY 5 cut(s) 764, 805, 1751, 1757, 2246
AcuI CTGAAG 4 cut(s) 1094, 1419, 1629, 1999
AcvI CACGTG 2 cut(s) 286, 2000
AfaI GTAC 3 cut(s) 290, 469, 2325
AfiI CCNNNNNNNGG 3 cut(s) 621, 1156, 2457
AflII CTTAAG 1 cut(s) 1171
AflIII ACRYGT 6 cut(s) 285, 885, 1414, 1997, 2055, 2262
AjiI CACGTC 1 cut(s) 886
AjuI GAANNNNNNNTTGG 4 cut(s) 155, 187, 1936, 1968
Alw21I GWGCWC 2 cut(s) 1056, 1467
Alw26I GTCTC 4 cut(s) 231, 1916, 2427, 2668
AlwI GGATC 4 cut(s) 332, 640, 1868, 2712
AlwNI CAGNNNCTG 1 cut(s) 151
Ama87I CYCGRG 1 cut(s) 1122
AoxI GGCC 7 cut(s) 33, 243, 307, 1147, 1167, 1782, 2365
ApeKI GCWGC 5 cut(s) 101, 1559, 1580, 1888, 2231
ApoI RAATTY 5 cut(s) 764, 805, 1751, 1757, 2246
Asp700I GAANNNNTTC 5 cut(s) 167, 1070, 1149, 1424, 2250
Asp718I GGTACC 1 cut(s) 2323
AspLEI GCGC 1 cut(s) 199
AspS9I GGNCC 4 cut(s) 660, 2176, 2206, 2365
AsuHPI GGTGA 4 cut(s) 134, 388, 853, 1092
AsuII TTCGAA 2 cut(s) 1474, 1749
AvaI CYCGRG 1 cut(s) 1122
AvaII GGWCC 3 cut(s) 660, 2176, 2206
AxyI CCTNAGG 1 cut(s) 2613
BanI GGYRCC 1 cut(s) 2323
BanII GRGCYC 2 cut(s) 1056, 1467
BbrPI CACGTG 2 cut(s) 286, 2000
BbsI GAAGAC 7 cut(s) 148, 264, 647, 744, 981, 1179, 1202
Bbv12I GWGCWC 2 cut(s) 1056, 1467
BbvI GCAGC 5 cut(s) 113, 1567, 1571, 1900, 2243
BccI CCATC 7 cut(s) 315, 570, 577, 619, 1583, 2050, 2424
BceAI ACGGC 3 cut(s) 202, 1769, 2404
BcgI CGANNNNNNTGC 2 cut(s) 683, 717
BciVI GTATCC 1 cut(s) 2639
BclI TGATCA 2 cut(s) 124, 756
BcoDI GTCTC 4 cut(s) 231, 1916, 2427, 2668
BfaI CTAG 5 cut(s) 650, 830, 1772, 2595, 2639
BfmI CTRYAG 1 cut(s) 2541
BfrI CTTAAG 1 cut(s) 1171
BfuI GTATCC 1 cut(s) 2639
BglI GCCNNNNNGGC 1 cut(s) 41
BglII AGATCT 1 cut(s) 2010
BisI GCNGC 5 cut(s) 102, 1560, 1581, 1889, 2232
BlsI GCNGC 5 cut(s) 103, 1561, 1582, 1890, 2233
BmcAI AGTACT 1 cut(s) 469
Bme18I GGWCC 3 cut(s) 660, 2176, 2206
BmeT110I CYCGRG 1 cut(s) 1122
BmgBI CACGTC 1 cut(s) 886
BmgT120I GGNCC 4 cut(s) 660, 2176, 2206, 2365
BmiI GGNNCC 5 cut(s) 1214, 1266, 1509, 1621, 2325
BmrI ACTGGG 1 cut(s) 1784
BmsI GCATC 8 cut(s) 483, 992, 1024, 1033, 1287, 1512, 2547, 2579
BmuI ACTGGG 1 cut(s) 1784
BpiI GAAGAC 7 cut(s) 148, 264, 647, 744, 981, 1179, 1202
BplI GAGNNNNNCTC 4 cut(s) 1840, 1872, 2648, 2680
Bpu14I TTCGAA 2 cut(s) 1474, 1749
BpuEI CTTGAG 6 cut(s) 110, 1060, 1783, 2330, 2588, 2596
BsaAI YACGTR 3 cut(s) 286, 1813, 2000
BsaJI CCNNGG 4 cut(s) 615, 1707, 1943, 2140
Bsc4I CCNNNNNNNGG 3 cut(s) 621, 1156, 2457
Bse1I ACTGG 2 cut(s) 1790, 2319
Bse21I CCTNAGG 1 cut(s) 2613
Bse3DI GCAATG 4 cut(s) 1328, 1554, 2414, 2606
BseDI CCNNGG 4 cut(s) 615, 1707, 1943, 2140
BseLI CCNNNNNNNGG 3 cut(s) 621, 1156, 2457
BseMI GCAATG 4 cut(s) 1328, 1554, 2414, 2606
BseMII CTCAG 4 cut(s) 465, 2417, 2627, 2679
BseNI ACTGG 2 cut(s) 1790, 2319
BseXI GCAGC 5 cut(s) 113, 1567, 1571, 1900, 2243
BseYI CCCAGC 1 cut(s) 2127
Bsh1236I CGCG 1 cut(s) 2264
Bsh1285I CGRYCG 1 cut(s) 1164
BshFI GGCC 7 cut(s) 35, 245, 309, 1149, 1169, 1784, 2367
BshNI GGYRCC 1 cut(s) 2323
BsiEI CGRYCG 1 cut(s) 1164
BsiHKAI GWGCWC 2 cut(s) 1056, 1467
BsiHKCI CYCGRG 1 cut(s) 1122
BslFI GGGAC 2 cut(s) 1772, 2473
BslI CCNNNNNNNGG 3 cut(s) 621, 1156, 2457
BsmAI GTCTC 4 cut(s) 231, 1916, 2427, 2668
BsmBI CGTCTC 1 cut(s) 2427
BsmFI GGGAC 2 cut(s) 1772, 2473
BsmI GAATGC 1 cut(s) 1070
BsnI GGCC 7 cut(s) 35, 245, 309, 1149, 1169, 1784, 2367
BsoBI CYCGRG 1 cut(s) 1122
Bsp119I TTCGAA 2 cut(s) 1474, 1749
Bsp1286I GDGCHC 2 cut(s) 1056, 1467
BspACI CCGC 5 cut(s) 303, 506, 1894, 2327, 2702
BspANI GGCC 7 cut(s) 35, 245, 309, 1149, 1169, 1784, 2367
BspCNI CTCAG 4 cut(s) 466, 2418, 2626, 2678
BspFNI CGCG 1 cut(s) 2264
BspHI TCATGA 1 cut(s) 159
BspLI GGNNCC 5 cut(s) 1214, 1266, 1509, 1621, 2325
BspPI GGATC 4 cut(s) 332, 640, 1868, 2712
BspQI GCTCTTC 2 cut(s) 677, 1268
BspT104I TTCGAA 2 cut(s) 1474, 1749
BspT107I GGYRCC 1 cut(s) 2323
BspTI CTTAAG 1 cut(s) 1171
BsrDI GCAATG 4 cut(s) 1328, 1554, 2414, 2606
BsrI ACTGG 2 cut(s) 1790, 2319
BssECI CCNNGG 4 cut(s) 615, 1707, 1943, 2140
BssT1I CCWWGG 2 cut(s) 1943, 2140
Bst4CI ACNGT 3 cut(s) 607, 715, 723
Bst6I CTCTTC 6 cut(s) 677, 780, 964, 1268, 2235, 2473
BstAFI CTTAAG 1 cut(s) 1171
BstAPI GCANNNNNTGC 1 cut(s) 2725
BstBAI YACGTR 3 cut(s) 286, 1813, 2000
BstBI TTCGAA 2 cut(s) 1474, 1749
BstC8I GCNNGC 3 cut(s) 229, 1545, 2369
BstDEI CTNAG 8 cut(s) 474, 1191, 1289, 2105, 2426, 2495, 2613, 2665
BstDSI CCRYGG 2 cut(s) 615, 1707
BstFNI CGCG 1 cut(s) 2264
BstHHI GCGC 1 cut(s) 199
BstMAI GTCTC 4 cut(s) 231, 1916, 2427, 2668
BstMCI CGRYCG 1 cut(s) 1164
BstMWI GCNNNNNNNGC 7 cut(s) 41, 110, 224, 1166, 1221, 1969, 2725
BstNSI RCATGY 3 cut(s) 1418, 1518, 2059
BstSFI CTRYAG 1 cut(s) 2541
BstSNI TACGTA 1 cut(s) 1813
BstUI CGCG 1 cut(s) 2264
BstV1I GCAGC 5 cut(s) 113, 1567, 1571, 1900, 2243
BstV2I GAAGAC 7 cut(s) 148, 264, 647, 744, 981, 1179, 1202
BstX2I RGATCY 1 cut(s) 2010
BstYI RGATCY 1 cut(s) 2010
Bsu36I CCTNAGG 1 cut(s) 2613
BsuI GTATCC 1 cut(s) 2639
BsuRI GGCC 7 cut(s) 35, 245, 309, 1149, 1169, 1784, 2367
BtgI CCRYGG 2 cut(s) 615, 1707
BtgZI GCGATG 2 cut(s) 1725, 2570
BtrI CACGTC 1 cut(s) 886
BtsIMutI CAGTG 1 cut(s) 666
Cac8I GCNNGC 3 cut(s) 229, 1545, 2369
CaiI CAGNNNCTG 1 cut(s) 151
CciI TCATGA 1 cut(s) 159
CfoI GCGC 1 cut(s) 199
Cfr13I GGNCC 4 cut(s) 660, 2176, 2206, 2365
CseI GACGC 3 cut(s) 1961, 2270, 2717
Csp6I GTAC 3 cut(s) 289, 468, 2324
CviQI GTAC 3 cut(s) 289, 468, 2324
DdeI CTNAG 8 cut(s) 474, 1191, 1289, 2105, 2426, 2495, 2613, 2665
DraI TTTAAA 1 cut(s) 1756
Eam1104I CTCTTC 6 cut(s) 677, 780, 964, 1268, 2235, 2473
EarI CTCTTC 6 cut(s) 677, 780, 964, 1268, 2235, 2473
Ecl136II GAGCTC 2 cut(s) 1054, 1465
Eco105I TACGTA 1 cut(s) 1813
Eco130I CCWWGG 2 cut(s) 1943, 2140
Eco147I AGGCCT 1 cut(s) 1149
Eco24I GRGCYC 2 cut(s) 1056, 1467
Eco32I GATATC 1 cut(s) 895
Eco47I GGWCC 3 cut(s) 660, 2176, 2206
Eco53kI GAGCTC 2 cut(s) 1054, 1465
Eco57I CTGAAG 4 cut(s) 1094, 1419, 1629, 1999
Eco72I CACGTG 2 cut(s) 286, 2000
Eco81I CCTNAGG 1 cut(s) 2613
Eco88I CYCGRG 1 cut(s) 1122
EcoICRI GAGCTC 2 cut(s) 1054, 1465
EcoO109I RGGNCCY 3 cut(s) 660, 2176, 2206
EcoRI GAATTC 1 cut(s) 805
EcoRV GATATC 1 cut(s) 895
EcoT14I CCWWGG 2 cut(s) 1943, 2140
EcoT22I ATGCAT 3 cut(s) 706, 1048, 1527
EcoT38I GRGCYC 2 cut(s) 1056, 1467
ErhI CCWWGG 2 cut(s) 1943, 2140
Esp3I CGTCTC 1 cut(s) 2427
FalI AAGNNNNNCTT 8 cut(s) 155, 187, 522, 554, 785, 817, 1265, 1297
FaqI GGGAC 2 cut(s) 1772, 2473
FauNDI CATATG 1 cut(s) 1585
FbaI TGATCA 2 cut(s) 124, 756
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 5 cut(s) 102, 1560, 1581, 1889, 2232
FriOI GRGCYC 2 cut(s) 1056, 1467
Fsp4HI GCNGC 5 cut(s) 102, 1560, 1581, 1889, 2232
FspBI CTAG 5 cut(s) 650, 830, 1772, 2595, 2639
GlaI GCGC 1 cut(s) 198
GluI GCNGC 5 cut(s) 102, 1560, 1581, 1889, 2232
GsaI CCCAGC 1 cut(s) 2131
HaeIII GGCC 7 cut(s) 35, 245, 309, 1149, 1169, 1784, 2367
HgaI GACGC 3 cut(s) 1961, 2270, 2717
HhaI GCGC 1 cut(s) 199
Hin6I GCGC 1 cut(s) 197
HinP1I GCGC 1 cut(s) 197
HincII GTYRAC 3 cut(s) 184, 1795, 2260
HindII GTYRAC 3 cut(s) 184, 1795, 2260
HindIII AAGCTT 4 cut(s) 353, 1906, 2070, 2492
HinfI GANTC 7 cut(s) 393, 1021, 1877, 1987, 2087, 2447, 2681
HphI GGTGA 4 cut(s) 134, 388, 853, 1092
Hpy166II GTNNAC 8 cut(s) 184, 289, 484, 1100, 1428, 1795, 2260, 2342
Hpy8I GTNNAC 8 cut(s) 184, 289, 484, 1100, 1428, 1795, 2260, 2342
Hpy99I CGWCG 1 cut(s) 188
HpyCH4III ACNGT 3 cut(s) 607, 715, 723
HpyCH4IV ACGT 4 cut(s) 285, 885, 1812, 1999
HpyF10VI GCNNNNNNNGC 7 cut(s) 41, 110, 224, 1166, 1221, 1969, 2725
HpyF3I CTNAG 8 cut(s) 474, 1191, 1289, 2105, 2426, 2495, 2613, 2665
HpySE526I ACGT 4 cut(s) 285, 885, 1812, 1999
HspAI GCGC 1 cut(s) 197
KpnI GGTACC 1 cut(s) 2327
Ksp22I TGATCA 2 cut(s) 124, 756
LguI GCTCTTC 2 cut(s) 677, 1268
LmnI GCTCC 8 cut(s) 148, 1051, 1212, 1462, 1593, 1619, 1867, 1896
Lsp1109I GCAGC 5 cut(s) 113, 1567, 1571, 1900, 2243
LweI GCATC 8 cut(s) 483, 992, 1024, 1033, 1287, 1512, 2547, 2579
MaeI CTAG 5 cut(s) 650, 830, 1772, 2595, 2639
MaeII ACGT 4 cut(s) 285, 885, 1812, 1999
MaeIII GTNAC 2 cut(s) 1677, 2536
MflI RGATCY 1 cut(s) 2010
MhlI GDGCHC 2 cut(s) 1056, 1467
MluI ACGCGT 1 cut(s) 2262
MlyI GAGTC 1 cut(s) 2690
MmeI TCCRAC 1 cut(s) 858
Mph1103I ATGCAT 3 cut(s) 706, 1048, 1527
MroXI GAANNNNTTC 5 cut(s) 167, 1070, 1149, 1424, 2250
MslI CAYNNNNRTG 2 cut(s) 1673, 2030
MspA1I CMGCKG 1 cut(s) 2131
MspCI CTTAAG 1 cut(s) 1171
Mva1269I GAATGC 1 cut(s) 1070
MvnI CGCG 1 cut(s) 2264
MwoI GCNNNNNNNGC 7 cut(s) 41, 110, 224, 1166, 1221, 1969, 2725
NdeI CATATG 1 cut(s) 1585
NlaIV GGNNCC 5 cut(s) 1214, 1266, 1509, 1621, 2325
NmuCI GTSAC 1 cut(s) 1677
NsiI ATGCAT 3 cut(s) 706, 1048, 1527
NspI RCATGY 3 cut(s) 1418, 1518, 2059
NspV TTCGAA 2 cut(s) 1474, 1749
PagI TCATGA 1 cut(s) 159
PceI AGGCCT 1 cut(s) 1149
PciI ACATGT 2 cut(s) 1414, 2055
PciSI GCTCTTC 2 cut(s) 677, 1268
PcsI WCGNNNNNNNCGW 2 cut(s) 1024, 1996
PctI GAATGC 1 cut(s) 1070
PdmI GAANNNNTTC 5 cut(s) 167, 1070, 1149, 1424, 2250
PfeI GAWTC 6 cut(s) 393, 1021, 1877, 1987, 2087, 2447
PkrI GCNGC 5 cut(s) 103, 1561, 1582, 1890, 2233
Ple19I CGATCG 1 cut(s) 1164
PleI GAGTC 1 cut(s) 2689
PmaCI CACGTG 2 cut(s) 286, 2000
PmlI CACGTG 2 cut(s) 286, 2000
PpsI GAGTC 1 cut(s) 2689
Ppu21I YACGTR 3 cut(s) 286, 1813, 2000
PpuMI RGGWCCY 3 cut(s) 660, 2176, 2206
PscI ACATGT 2 cut(s) 1414, 2055
PsiI TTATAA 1 cut(s) 2007
Psp124BI GAGCTC 2 cut(s) 1056, 1467
Psp5II RGGWCCY 3 cut(s) 660, 2176, 2206
PspCI CACGTG 2 cut(s) 286, 2000
PspFI CCCAGC 1 cut(s) 2127
PspN4I GGNNCC 5 cut(s) 1214, 1266, 1509, 1621, 2325
PspPI GGNCC 4 cut(s) 660, 2176, 2206, 2365
PspPPI RGGWCCY 3 cut(s) 660, 2176, 2206
PstNI CAGNNNCTG 1 cut(s) 151
PsuI RGATCY 1 cut(s) 2010
PvuI CGATCG 1 cut(s) 1164
PvuII CAGCTG 1 cut(s) 2131
RsaI GTAC 3 cut(s) 290, 469, 2325
RsaNI GTAC 3 cut(s) 289, 468, 2324
RseI CAYNNNNRTG 2 cut(s) 1673, 2030
SacI GAGCTC 2 cut(s) 1056, 1467
SalI GTCGAC 1 cut(s) 182
SapI GCTCTTC 2 cut(s) 677, 1268
SatI GCNGC 5 cut(s) 102, 1560, 1581, 1889, 2232
Sau96I GGNCC 4 cut(s) 660, 2176, 2206, 2365
ScaI AGTACT 1 cut(s) 469
SchI GAGTC 1 cut(s) 2690
SduI GDGCHC 2 cut(s) 1056, 1467
SfaNI GCATC 8 cut(s) 483, 992, 1024, 1033, 1287, 1512, 2547, 2579
SfcI CTRYAG 1 cut(s) 2541
SfuI TTCGAA 2 cut(s) 1474, 1749
SinI GGWCC 3 cut(s) 660, 2176, 2206
SmiI ATTTAAAT 1 cut(s) 1756
SmiMI CAYNNNNRTG 2 cut(s) 1673, 2030
SmlI CTYRAG 7 cut(s) 89, 1075, 1171, 1762, 2345, 2567, 2575
SmoI CTYRAG 7 cut(s) 89, 1075, 1171, 1762, 2345, 2567, 2575
SnaBI TACGTA 1 cut(s) 1813
SseBI AGGCCT 1 cut(s) 1149
SsiI CCGC 5 cut(s) 303, 506, 1894, 2327, 2702
SspI AATATT 2 cut(s) 2050, 2101
SspMI CTAG 5 cut(s) 650, 830, 1772, 2595, 2639
SstI GAGCTC 2 cut(s) 1056, 1467
StuI AGGCCT 1 cut(s) 1149
StyI CCWWGG 2 cut(s) 1943, 2140
SwaI ATTTAAAT 1 cut(s) 1756
TaaI ACNGT 3 cut(s) 607, 715, 723
TaiI ACGT 4 cut(s) 288, 888, 1815, 2002
TaqI TCGA 7 cut(s) 183, 235, 693, 967, 1474, 1749, 2409
TatI WGTACW 1 cut(s) 467
TfiI GAWTC 6 cut(s) 393, 1021, 1877, 1987, 2087, 2447
TscAI CASTG 1 cut(s) 673
TseFI GTSAC 1 cut(s) 1677
TseI GCWGC 5 cut(s) 101, 1559, 1580, 1888, 2231
Tsp45I GTSAC 1 cut(s) 1677
TspGWI ACGGA 3 cut(s) 604, 1520, 2664
TspRI CASTG 1 cut(s) 673
Vha464I CTTAAG 1 cut(s) 1171
VpaK11BI GGWCC 3 cut(s) 660, 2176, 2206
XapI RAATTY 5 cut(s) 764, 805, 1751, 1757, 2246
XbaI TCTAGA 1 cut(s) 1771
XceI RCATGY 3 cut(s) 1418, 1518, 2059
XcmI CCANNNNNNNNNTGG 1 cut(s) 354
XmiI GTMKAC 1 cut(s) 183
XmnI GAANNNNTTC 5 cut(s) 167, 1070, 1149, 1424, 2250
XspI CTAG 5 cut(s) 650, 830, 1772, 2595, 2639
ZrmI AGTACT 1 cut(s) 469
Zsp2I ATGCAT 3 cut(s) 706, 1048, 1527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.