Rroxscaffold_1G00028510

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000110
Physical Location & Seq
Forward (+)
36301250 .. 36304795
3546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00028510.1

Sequence Viewer

Length: 1623 bp
ATGTCTTCTAAGAAGTCGCTGGATCAATGGCAACAAGTCTACAACAACTTGAATTGGTATCTACATAACAATCCATCCCTAGACCCTGTGAGAAACATTTTGTTGCTGAGTTTCAATGATTTGCCATCTCAACTGAAGCATTGCTTCCTCTATTGTTCCCTTTTTCCAGAAGATTATCTATTTAAAAGAAAAAGGATGACTAGATTATGGATAGCGGAAGGATTTGTTGAAAATGTGAAAGGGGTCACGCCCGAAGAAGTTGCAGATGGCTATATTTGGGAACTCTGTTCCCGTAGCATGTTACAAGTTGCAGATGGCTTTGTTTCAGGAGCACCTTTGGGAAGGCCGAAAAAATTTAAGATGCATGATCTGATGAGAGAGCTTGCTTTGTCGATAGCCGAAAAAGAAAAGTTTGGTTATGTATACGACGGGAGAGAAGTAATGGAAGAGATCTCAACCCGTCGCTTGTCAATTCATAGAATGAAAGGAGAAATTAAATCGTGGCGTGGTATGTCAAAGATTCGTTCTCTTCTTGTATTTGACACCGTCATGTCCTCATTGTCCTTCTTAAATACACTGGTTTCTCAATTCAAATTGTTGAGGACACTAGACTTGGAGGATGTCCAAATTGATAAACTGCCGGGTGCAGTTGTTTACTTGTTCAACTTGAGATATTTAAATTTGAAGGGAACTTTTATCGAGGAACTTCCAGAGTCCATAAGGCATCTCCGCAACCTTCAATTTCTGAACATCAGGGATACTAAGATAGAGTCACTTCCACAAGGAATTACGAGGTTGCTGAACCTGCGGAATCTAATTATGTTTCGCTACACTAGGAACCTGTACTTCAAAGTTGCGAGTGGAACAAAAGCGCCATCAAATATTTGTAAGTTGCAGAAATTGCAAAGTTTATTAGTAATTGAATCAGAAGGGGACACTTGTAGACTTATCGGCAACATGACTCAACTTAAGAGGATCGGCATATCGAATGTGAAAGAAAGAGATGAGATTGACCTTTGGGTCTCAATTCAAAAGTTGACTCTGCTTCAAAGTCTGGGATTAATGGCAAGTAATGAAGAGGAAATTCTTCCGGTGAAAGCAGAATGTCCACCTCTTCCGCACCTTCGAAAACTTGGATTGGTTGGCAGACTGCAAAACGTAATACCTTGGTTTTCTTCACTGCATAGCCTCACAACTCTGGTTCTGCATTGGTCAAGACTTGAAGAGGATTTACTACCTCAAATTGAAGCACTGCTCAATCTGACAAGGCTTAATCTTTGTAATGCATATGTTGGGGAAGAGTTGTGTTTCCGCAGAGGCTTTGTAAAGCTAATGCGGTTGGAGTTGTTGAATTTTGCCTCGGTGAAAAAGATAACTATAGAAAATGGGGTGATGCCAAATCTCCGGTACCTATGCGTTGACAGCTTCATGGAGTTGAAGACAGTGCCACTAGGCCTTGAATACCTTTCTACTCTACAATATTTGGCCCTGAAAGATGTTCCCATGGAAGTTATAAGGCCCATTCGGAAAAGAGGTGTGGATCGCTCTAAAGTACAACACATTCCTGAGATCATACATATTTTCGAACAGTCATCCAAGTGGGTCCACGAAAACTTGGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

540

Amino Acids

62.63

Weight (kDa)

9.18

Isoelectric Point (pI)

53.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 54 - 129 4.7e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 173 - 495 2.5e-38 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1514
AasI GACNNNNNNGTC 1 cut(s) 1019
Acc36I ACCTGC 1 cut(s) 813
Acc65I GGTACC 1 cut(s) 1407
AccB1I GGYRCC 1 cut(s) 1407
AccI GTMKAC 3 cut(s) 39, 423, 943
AciI CCGC 6 cut(s) 215, 730, 808, 1118, 1312, 1336
AclWI GGATC 3 cut(s) 30, 983, 1548
AcsI RAATTY 4 cut(s) 353, 679, 1083, 1351
AcuI CTGAAG 1 cut(s) 155
AfaI GTAC 3 cut(s) 845, 1409, 1554
AflII CTTAAG 1 cut(s) 968
AluBI AGCT 3 cut(s) 382, 1330, 1425
AluI AGCT 3 cut(s) 382, 1330, 1425
Alw21I GWGCWC 1 cut(s) 334
Alw26I GTCTC 1 cut(s) 1027
AlwI GGATC 3 cut(s) 30, 983, 1548
AoxI GGCC 5 cut(s) 344, 1453, 1485, 1517, 1617
ApoI RAATTY 4 cut(s) 353, 679, 1083, 1351
AseI ATTAAT 1 cut(s) 1061
Asp700I GAANNNNTTC 1 cut(s) 1086
Asp718I GGTACC 1 cut(s) 1407
AspLEI GCGC 1 cut(s) 874
AspS9I GGNCC 3 cut(s) 1486, 1518, 1603
AsuC2I CCSGG 1 cut(s) 642
AsuHPI GGTGA 3 cut(s) 1105, 1375, 1402
AsuII TTCGAA 2 cut(s) 1126, 1584
AvaII GGWCC 1 cut(s) 1603
BanI GGYRCC 1 cut(s) 1407
BarI GAAGNNNNNNTAC 2 cut(s) 1215, 1247
BbsI GAAGAC 1 cut(s) 1445
Bbv12I GWGCWC 1 cut(s) 334
BccI CCATC 5 cut(s) 82, 133, 260, 308, 883
BcgI CGANNNNNNTGC 2 cut(s) 242, 276
BciVI GTATCC 1 cut(s) 751
BcnI CCSGG 1 cut(s) 642
BcoDI GTCTC 1 cut(s) 1027
BfaI CTAG 6 cut(s) 80, 201, 608, 834, 1451, 1621
BfmI CTRYAG 1 cut(s) 1377
BfoI RGCGCY 1 cut(s) 875
BfrI CTTAAG 1 cut(s) 968
BfuAI ACCTGC 1 cut(s) 813
BfuI GTATCC 1 cut(s) 751
BglII AGATCT 1 cut(s) 450
Bme1390I CCNGG 1 cut(s) 642
Bme18I GGWCC 1 cut(s) 1603
BmgT120I GGNCC 3 cut(s) 1486, 1518, 1603
BmiI GGNNCC 3 cut(s) 839, 1409, 1604
BmrFI CCNGG 1 cut(s) 642
BmsI GCATC 3 cut(s) 351, 733, 1383
BpiI GAAGAC 1 cut(s) 1445
Bpu14I TTCGAA 2 cut(s) 1126, 1584
BpuEI CTTGAG 1 cut(s) 688
BpuMI CCSGG 1 cut(s) 642
BsaI GGTCTC 1 cut(s) 1027
BsaJI CCNNGG 3 cut(s) 1166, 1359, 1503
BsaWI WCCGGW 2 cut(s) 1090, 1404
Bse1I ACTGG 1 cut(s) 582
Bse3DI GCAATG 1 cut(s) 139
BseDI CCNNGG 3 cut(s) 1166, 1359, 1503
BseGI GGATG 4 cut(s) 74, 201, 625, 1592
BseMI GCAATG 1 cut(s) 139
BseMII CTCAG 2 cut(s) 98, 1557
BseNI ACTGG 1 cut(s) 582
BsgI GTGCAG 1 cut(s) 666
BshFI GGCC 5 cut(s) 346, 1455, 1487, 1519, 1619
BshNI GGYRCC 1 cut(s) 1407
BsiHKAI GWGCWC 1 cut(s) 334
BsiSI CCGG 3 cut(s) 641, 1091, 1405
BslFI GGGAC 1 cut(s) 947
BsmAI GTCTC 1 cut(s) 1027
BsmFI GGGAC 1 cut(s) 947
BsnI GGCC 5 cut(s) 346, 1455, 1487, 1519, 1619
Bso31I GGTCTC 1 cut(s) 1027
Bsp119I TTCGAA 2 cut(s) 1126, 1584
Bsp1286I GDGCHC 1 cut(s) 334
Bsp143I GATC 6 cut(s) 22, 367, 450, 975, 1540, 1569
Bsp19I CCATGG 1 cut(s) 1503
BspACI CCGC 6 cut(s) 215, 730, 808, 1118, 1312, 1336
BspANI GGCC 5 cut(s) 346, 1455, 1487, 1519, 1619
BspCNI CTCAG 2 cut(s) 99, 1558
BspLI GGNNCC 3 cut(s) 839, 1409, 1604
BspMI ACCTGC 1 cut(s) 813
BspPI GGATC 3 cut(s) 30, 983, 1548
BspT104I TTCGAA 2 cut(s) 1126, 1584
BspT107I GGYRCC 1 cut(s) 1407
BspTI CTTAAG 1 cut(s) 968
BspTNI GGTCTC 1 cut(s) 1027
BsrDI GCAATG 1 cut(s) 139
BsrI ACTGG 1 cut(s) 582
BssECI CCNNGG 3 cut(s) 1166, 1359, 1503
BssMI GATC 6 cut(s) 22, 367, 450, 975, 1540, 1569
BssNAI GTATAC 1 cut(s) 424
BssT1I CCWWGG 2 cut(s) 1166, 1503
Bst1107I GTATAC 1 cut(s) 424
Bst4CI ACNGT 3 cut(s) 547, 1444, 1590
Bst6I CTCTTC 6 cut(s) 441, 534, 1071, 1119, 1218, 1293
BstAFI CTTAAG 1 cut(s) 968
BstAPI GCANNNNNTGC 1 cut(s) 901
BstBI TTCGAA 2 cut(s) 1126, 1584
BstC8I GCNNGC 1 cut(s) 384
BstDEI CTNAG 4 cut(s) 9, 107, 762, 1566
BstDSI CCRYGG 1 cut(s) 1503
BstF5I GGATG 4 cut(s) 74, 201, 625, 1592
BstH2I RGCGCY 1 cut(s) 875
BstHHI GCGC 1 cut(s) 874
BstKTI GATC 6 cut(s) 25, 370, 453, 978, 1543, 1572
BstMAI GTCTC 1 cut(s) 1027
BstMBI GATC 6 cut(s) 22, 367, 450, 975, 1540, 1569
BstMWI GCNNNNNNNGC 3 cut(s) 805, 901, 1422
BstNSI RCATGY 1 cut(s) 301
BstSCI CCNGG 1 cut(s) 640
BstSFI CTRYAG 1 cut(s) 1377
BstV2I GAAGAC 1 cut(s) 1445
BstX2I RGATCY 1 cut(s) 450
BstYI RGATCY 1 cut(s) 450
BstZ17I GTATAC 1 cut(s) 424
BsuI GTATCC 1 cut(s) 751
BsuRI GGCC 5 cut(s) 346, 1455, 1487, 1519, 1619
BtgI CCRYGG 1 cut(s) 1503
BtsCI GGATG 4 cut(s) 74, 201, 625, 1592
BtsI GCAGTG 2 cut(s) 1178, 1250
BtsIMutI CAGTG 4 cut(s) 575, 1178, 1250, 1449
BveI ACCTGC 1 cut(s) 813
Cac8I GCNNGC 1 cut(s) 384
CfoI GCGC 1 cut(s) 874
Cfr13I GGNCC 3 cut(s) 1486, 1518, 1603
Csp6I GTAC 3 cut(s) 844, 1408, 1553
CviAII CATG 6 cut(s) 298, 365, 550, 958, 1429, 1504
CviQI GTAC 3 cut(s) 844, 1408, 1553
DdeI CTNAG 4 cut(s) 9, 107, 762, 1566
DpnI GATC 6 cut(s) 24, 369, 452, 977, 1542, 1571
DpnII GATC 6 cut(s) 22, 367, 450, 975, 1540, 1569
DraI TTTAAA 2 cut(s) 184, 678
DrdI GACNNNNNNGTC 1 cut(s) 1019
DseDI GACNNNNNNGTC 1 cut(s) 1019
Eam1104I CTCTTC 6 cut(s) 441, 534, 1071, 1119, 1218, 1293
EarI CTCTTC 6 cut(s) 441, 534, 1071, 1119, 1218, 1293
Eco130I CCWWGG 2 cut(s) 1166, 1503
Eco147I AGGCCT 1 cut(s) 1455
Eco31I GGTCTC 1 cut(s) 1027
Eco47I GGWCC 1 cut(s) 1603
Eco57I CTGAAG 1 cut(s) 155
EcoT14I CCWWGG 2 cut(s) 1166, 1503
EcoT22I ATGCAT 2 cut(s) 366, 1288
ErhI CCWWGG 2 cut(s) 1166, 1503
FaeI CATG 6 cut(s) 301, 368, 553, 961, 1432, 1507
FalI AAGNNNNNCTT 2 cut(s) 128, 160
FaqI GGGAC 1 cut(s) 947
FatI CATG 6 cut(s) 297, 364, 549, 957, 1428, 1503
FauNDI CATATG 1 cut(s) 1288
FblI GTMKAC 3 cut(s) 39, 423, 943
FokI GGATG 4 cut(s) 61, 208, 632, 1579
FspBI CTAG 6 cut(s) 80, 201, 608, 834, 1451, 1621
GlaI GCGC 1 cut(s) 873
HaeII RGCGCY 1 cut(s) 875
HaeIII GGCC 5 cut(s) 346, 1455, 1487, 1519, 1619
HapII CCGG 3 cut(s) 641, 1091, 1405
HhaI GCGC 1 cut(s) 874
Hin1II CATG 6 cut(s) 301, 368, 553, 961, 1432, 1507
Hin6I GCGC 1 cut(s) 872
HinP1I GCGC 1 cut(s) 872
HincII GTYRAC 2 cut(s) 1038, 1420
HindII GTYRAC 2 cut(s) 1038, 1420
HinfI GANTC 7 cut(s) 520, 713, 770, 811, 923, 961, 1039
HpaII CCGG 3 cut(s) 641, 1091, 1405
HphI GGTGA 3 cut(s) 1105, 1375, 1402
Hpy166II GTNNAC 8 cut(s) 40, 424, 655, 944, 1038, 1109, 1420, 1606
Hpy188I TCNGA 5 cut(s) 372, 747, 928, 1263, 1527
Hpy188III TCNNGA 5 cut(s) 167, 327, 710, 1215, 1565
Hpy8I GTNNAC 8 cut(s) 40, 424, 655, 944, 1038, 1109, 1420, 1606
Hpy99I CGWCG 2 cut(s) 431, 465
HpyAV CCTTC 7 cut(s) 212, 336, 574, 679, 746, 923, 1133
HpyCH4III ACNGT 3 cut(s) 547, 1444, 1590
HpyCH4IV ACGT 1 cut(s) 1158
HpyF10VI GCNNNNNNNGC 3 cut(s) 805, 901, 1422
HpyF3I CTNAG 4 cut(s) 9, 107, 762, 1566
HpySE526I ACGT 1 cut(s) 1158
Hsp92II CATG 6 cut(s) 301, 368, 553, 961, 1432, 1507
HspAI GCGC 1 cut(s) 872
KpnI GGTACC 1 cut(s) 1411
Kzo9I GATC 6 cut(s) 22, 367, 450, 975, 1540, 1569
LmnI GCTCC 1 cut(s) 329
LweI GCATC 3 cut(s) 351, 733, 1383
MaeI CTAG 6 cut(s) 80, 201, 608, 834, 1451, 1621
MaeII ACGT 1 cut(s) 1158
MaeIII GTNAC 3 cut(s) 244, 300, 771
MalI GATC 6 cut(s) 24, 369, 452, 977, 1542, 1571
MboI GATC 6 cut(s) 22, 367, 450, 975, 1540, 1569
MflI RGATCY 1 cut(s) 450
MhlI GDGCHC 1 cut(s) 334
MlyI GAGTC 4 cut(s) 722, 779, 955, 1033
MmeI TCCRAC 1 cut(s) 1320
Mph1103I ATGCAT 2 cut(s) 366, 1288
MroXI GAANNNNTTC 1 cut(s) 1086
MseI TTAA 8 cut(s) 183, 357, 495, 569, 677, 969, 1061, 1272
MslI CAYNNNNRTG 2 cut(s) 548, 1597
MspCI CTTAAG 1 cut(s) 968
MspI CCGG 3 cut(s) 641, 1091, 1405
MspR9I CCNGG 1 cut(s) 642
MwoI GCNNNNNNNGC 3 cut(s) 805, 901, 1422
NciI CCSGG 1 cut(s) 642
NcoI CCATGG 1 cut(s) 1503
NdeI CATATG 1 cut(s) 1288
NdeII GATC 6 cut(s) 22, 367, 450, 975, 1540, 1569
NlaIII CATG 6 cut(s) 301, 368, 553, 961, 1432, 1507
NlaIV GGNNCC 3 cut(s) 839, 1409, 1604
NmuCI GTSAC 2 cut(s) 244, 771
NsiI ATGCAT 2 cut(s) 366, 1288
NspI RCATGY 1 cut(s) 301
NspV TTCGAA 2 cut(s) 1126, 1584
PceI AGGCCT 1 cut(s) 1455
PdmI GAANNNNTTC 1 cut(s) 1086
PfeI GAWTC 3 cut(s) 520, 811, 923
PflFI GACNNNGTC 1 cut(s) 545
PleI GAGTC 4 cut(s) 721, 778, 955, 1033
PpsI GAGTC 4 cut(s) 721, 778, 955, 1033
PshBI ATTAAT 1 cut(s) 1061
PsiI TTATAA 1 cut(s) 1514
PspN4I GGNNCC 3 cut(s) 839, 1409, 1604
PspPI GGNCC 3 cut(s) 1486, 1518, 1603
PsuI RGATCY 1 cut(s) 450
PsyI GACNNNGTC 1 cut(s) 545
RsaI GTAC 3 cut(s) 845, 1409, 1554
RsaNI GTAC 3 cut(s) 844, 1408, 1553
RseI CAYNNNNRTG 2 cut(s) 548, 1597
SaqAI TTAA 8 cut(s) 183, 357, 495, 569, 677, 969, 1061, 1272
Sau3AI GATC 6 cut(s) 22, 367, 450, 975, 1540, 1569
Sau96I GGNCC 3 cut(s) 1486, 1518, 1603
SchI GAGTC 4 cut(s) 722, 779, 955, 1033
ScrFI CCNGG 1 cut(s) 642
SduI GDGCHC 1 cut(s) 334
SfaNI GCATC 3 cut(s) 351, 733, 1383
SfcI CTRYAG 1 cut(s) 1377
SfuI TTCGAA 2 cut(s) 1126, 1584
SinI GGWCC 1 cut(s) 1603
SmiI ATTTAAAT 1 cut(s) 678
SmiMI CAYNNNNRTG 2 cut(s) 548, 1597
SmlI CTYRAG 2 cut(s) 667, 968
SmoI CTYRAG 2 cut(s) 667, 968
SseBI AGGCCT 1 cut(s) 1455
SsiI CCGC 6 cut(s) 215, 730, 808, 1118, 1312, 1336
SspI AATATT 2 cut(s) 883, 1481
SspMI CTAG 6 cut(s) 80, 201, 608, 834, 1451, 1621
StuI AGGCCT 1 cut(s) 1455
StyD4I CCNGG 1 cut(s) 640
StyI CCWWGG 2 cut(s) 1166, 1503
SwaI ATTTAAAT 1 cut(s) 678
TaaI ACNGT 3 cut(s) 547, 1444, 1590
TaiI ACGT 1 cut(s) 1161
TaqI TCGA 5 cut(s) 392, 699, 986, 1126, 1584
TatI WGTACW 2 cut(s) 843, 1552
TfiI GAWTC 3 cut(s) 520, 811, 923
Tru1I TTAA 8 cut(s) 183, 357, 495, 569, 677, 969, 1061, 1272
Tru9I TTAA 8 cut(s) 183, 357, 495, 569, 677, 969, 1061, 1272
TscAI CASTG 4 cut(s) 582, 1185, 1257, 1449
TseFI GTSAC 2 cut(s) 244, 771
Tsp45I GTSAC 2 cut(s) 244, 771
TspDTI ATGAA 4 cut(s) 464, 497, 1089, 1417
TspRI CASTG 4 cut(s) 582, 1185, 1257, 1449
Tth111I GACNNNGTC 1 cut(s) 545
Vha464I CTTAAG 1 cut(s) 968
VpaK11BI GGWCC 1 cut(s) 1603
VspI ATTAAT 1 cut(s) 1061
XapI RAATTY 4 cut(s) 353, 679, 1083, 1351
XceI RCATGY 1 cut(s) 301
XmiI GTMKAC 3 cut(s) 39, 423, 943
XmnI GAANNNNTTC 1 cut(s) 1086
XspI CTAG 6 cut(s) 80, 201, 608, 834, 1451, 1621
Zsp2I ATGCAT 2 cut(s) 366, 1288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.