Rh5BG353400

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
54730322 .. 54733084
2763 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG353400.1

Sequence Viewer

Length: 2523 bp
ATGGCCTTGTCTGTTACGGACCTCTTAATTGGAAAACTTGCGACAATTCTTGAGAACGAAGGAACAACCATAGCAGGTGTTCGTCATGAAGTTGATAAGATTAAGGAGGAGTTTTTAAGCATGAAAGCTTTCCTAGTGGATGCGGAGGCCAACAAACCAAAAACTGAAGGACAGAAATTGTGGGTCGCAAGAATCAGAGACTTAGCCTATGATGTTGAAGATATCATTGATGAATTCATGTTTCACATGTATGCGAAGCAAACTGGGGGTCGACTTTCAAGGGGGCTACACAAAACCATTCGCGCTCCATGTAATCTTTGGTTCAGGCATAAAATTGCAAAGAAGTTGCAGAAAATTACTGACATGATCAAAGCCATTCCAGAGAGGAATCAAAGATACGTTGTTGGCCTTGTAGGAGGAGCAACTACATCCGAAGATATTCAGAATTTGGTGCAGAACCAAGCGGAGTCTTCGTTTTTCATTATGGAAGACGAACTGGTTGGGATTGAAGGCAAGAAGCAGATACTAATGGGATGGCTAATGGATGACGAGCAACACCAAACTGTTATATCTGTGGTGGGCATGGGAGGTTCTGGAAAGACAACTCTAGTTGCCAAGACCTTCACCAATGAACTGCTAAAGAGAAATTTTGATTGTTATGCATGGATTACTGTTTCCCAAACTTATGATGTGGTACACTTGTTTCGAAGCTTGATAAGGGAACTCTACAAATCAAGGAAGGAAAATTTCCCTGCAATTTTGAATGCCATGAGCCGCATAGAATTGCTAGAGTTACTAGTTAACTACTTGGAGTCCAAAAAATACCTAGTTGTTCTAGATGACGTGTGGGATGTAAAAGTATGGAGAGAAACAAAGGTATCACTTCAAGATAGACAACTTGGAAGTCGAGTCGTACTTACAACTCGAAATGAAGAAGTAGCATCCAACTCTTTTGGAGTTGAAAGCTATGTTTACCGTATTCAGCCCCTGCAACAGAATGAGGCTTGGGAACTCTTCAGCAGGAAAGCATTCTCAACTAAGCCACAAAAAACTTGTCCAACTGAGCTGAAGTCATTAGCTTGCCAACTTGTGGAGAAGTGTGAAGGCCTTCCTCTCGGCATTGTGGCTTTAGGTGGACTTATGTCTTCTAAGAAGTCGCTGGATCAATGGCAGCAAGTCTGCAACAACTTGAATTGCATGTTACAAGTTGCAGACGGCTTTGTTTCAGGAGAACCTTTGGGAAGGCCGAAAAAATTTAAGATGCATGATCTGATGCGTGAGCTTGCTTTGTCGATAGCCGAAAAAGAAAAGTTTGGTTATGTATACGACGGGAGAGAAGTAATGGAAGAGATCTCAACCCGTCGCTTGTCAATTCACAGAATGAAAGGAGAAATTAAATCATGGCGGGGTATGTCAAAGATTCGTTCTCTTCTTGTATTTGACACCGTCATGTCCTCATTGTCCTTCTTAAATACACTGGTTTCTCAATTCAAATTGTTGAGGACTCTAGACTTGGAGGATGTCCAAATTGATAAACTGCCGGGTGCAGTTGTTTACTTGTTCAACTTGAGATATTTAAATTTGAAGGGCACTTTAATCAAGGAACTTCCAGAGTCCATAAGGCGTCTCTGCAACCTTCAATTTCTAAACATCAGGGATACTAAGATAGAGTCACTTCCACAAGGAATTACGAGGTTGCTGAACCTGCGGAATCTAATTATGTTTCGCTACACTAGGAACCTGTACTTCAAAGTTGCGAGTGGGACAAAAGCGCCATCAAATATTTGTAAGTTGCAGAAATTGCAAAGTTTATTAGTAATTGAATCGGAAGGGGACACTTGTAGACTTATCGGCAACATGACCCAACTTAAGAGGATCGGCTTATCGAATGTGAAAGAAAGAGATGAGATTGACCTTTGGGTCTCAATTCAAAAGTTGACTCTGCTTCAAAGTCTGGGATTAATGGCAAGTAATGAAGAGGAAATTCTTCCGGTGAAAGTAGAATGTCCACCTCTTCCACACCTTCGAAAGCTTGGATTGCTTGGCAGACTGCAAAACGTAATACCTTGGTTTTCTTCACTGCATAGCCTCACAACTCTGGTTCTGCATTGGTCAAGACTTGAAGAGGATTTACTACCTCAAATTGAAGCACTGCTCAATCTGACAAGGCTTAGTCTTTGTAATGCATATGTTGGAGAAGAGTTGCGTTTCTGCAGAGGCTTTGTAAAGCTTATGAGGTTGGAGTTGTTGAATTTTGCCTCAGTGAAAAAGATAACTATAGAAAATGGGGTGATGCCAAATCTCCAGTACTTATGCGTTGACAGCTTCATGGAGTTGAAGACAGTGCCACTAGGCCTTGAATACCTTTCTACTCTACAATATTTGGCCCTGAAAGATGTTCCCATGGAAGTTATAAGGTCCATTCGGAAAAGAGGTGTGGATCGCTCTAAAGTACAACACATTCCTGAGATCATACATGTTTTCAAACAGTCATCCAAGTTGGTCCACGAAAACTTGGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

840

Amino Acids

96.17

Weight (kDa)

9.06

Isoelectric Point (pI)

44.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 8 - 87 2.1e-22 Rx N-terminal domain
NB-ARC PF00931 172 - 346 9.1e-46 NB-ARC domain
LRR_14 PF23598 473 - 795 3.4e-36 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2414
AarI CACCTGC 1 cut(s) 65
AasI GACNNNNNNGTC 1 cut(s) 1919
Acc36I ACCTGC 2 cut(s) 65, 1713
AccB7I CCANNNNNTGG 1 cut(s) 1090
AccI GTMKAC 3 cut(s) 271, 1323, 1843
AccII CGCG 1 cut(s) 303
AciI CCGC 5 cut(s) 143, 464, 775, 1405, 1708
AclWI GGATC 3 cut(s) 1170, 1883, 2448
AcsI RAATTY 8 cut(s) 233, 445, 646, 745, 1253, 1579, 1983, 2251
AcuI CTGAAG 3 cut(s) 186, 1000, 1088
AcyI GRCGYC 1 cut(s) 1624
AfaI GTAC 5 cut(s) 696, 915, 1745, 2309, 2454
AfiI CCNNNNNNNGG 1 cut(s) 1090
AflII CTTAAG 1 cut(s) 1868
AflIII ACRYGT 3 cut(s) 246, 843, 2476
AhlI ACTAGT 1 cut(s) 796
AjiI CACGTC 1 cut(s) 844
AluBI AGCT 9 cut(s) 128, 711, 966, 1066, 1079, 1282, 2032, 2230, 2325
AluI AGCT 9 cut(s) 128, 711, 966, 1066, 1079, 1282, 2032, 2230, 2325
Alw26I GTCTC 3 cut(s) 192, 1631, 1927
AlwI GGATC 3 cut(s) 1170, 1883, 2448
AlwNI CAGNNNCTG 1 cut(s) 988
AoxI GGCC 8 cut(s) 3, 147, 406, 1105, 1244, 2353, 2385, 2517
ApeKI GCWGC 1 cut(s) 1171
ApoI RAATTY 8 cut(s) 233, 445, 646, 745, 1253, 1579, 1983, 2251
ArsI GACNNNNNNTTYG 4 cut(s) 253, 285, 1039, 1071
AseI ATTAAT 1 cut(s) 1961
Asp700I GAANNNNTTC 5 cut(s) 128, 438, 1028, 1107, 1986
AspLEI GCGC 2 cut(s) 305, 1774
AspS9I GGNCC 4 cut(s) 19, 2386, 2418, 2503
AsuC2I CCSGG 1 cut(s) 1542
AsuHPI GGTGA 3 cut(s) 616, 2005, 2302
AsuII TTCGAA 2 cut(s) 706, 2026
AvaII GGWCC 3 cut(s) 19, 2418, 2503
BaeGI GKGCMC 1 cut(s) 1592
BaeI ACNNNNGTAYC 4 cut(s) 686, 719, 861, 894
BarI GAAGNNNNNNTAC 2 cut(s) 2115, 2147
BbsI GAAGAC 4 cut(s) 462, 495, 1137, 2345
BbvI GCAGC 1 cut(s) 1183
BccI CCATC 2 cut(s) 528, 1783
BceAI ACGGC 1 cut(s) 1231
BciVI GTATCC 1 cut(s) 1651
BclI TGATCA 1 cut(s) 366
BcnI CCSGG 1 cut(s) 1542
BcoDI GTCTC 3 cut(s) 192, 1631, 1927
BcuI ACTAGT 1 cut(s) 796
BfmI CTRYAG 2 cut(s) 2212, 2277
BfoI RGCGCY 1 cut(s) 1775
BfrI CTTAAG 1 cut(s) 1868
BfuAI ACCTGC 2 cut(s) 65, 1713
BfuI GTATCC 1 cut(s) 1651
BglII AGATCT 1 cut(s) 1350
BisI GCNGC 2 cut(s) 775, 1172
BlsI GCNGC 2 cut(s) 776, 1173
BmcAI AGTACT 1 cut(s) 2309
Bme1390I CCNGG 1 cut(s) 1542
Bme18I GGWCC 3 cut(s) 19, 2418, 2503
BmgBI CACGTC 1 cut(s) 844
BmgT120I GGNCC 4 cut(s) 19, 2386, 2418, 2503
BmiI GGNNCC 1 cut(s) 1739
BmrFI CCNGG 1 cut(s) 1542
BmrI ACTGGG 1 cut(s) 273
BmsI GCATC 5 cut(s) 130, 950, 1251, 1263, 2283
BmuI ACTGGG 1 cut(s) 273
BoxI GACNNNNGTC 1 cut(s) 1141
BpiI GAAGAC 4 cut(s) 462, 495, 1137, 2345
BpmI CTGGAG 1 cut(s) 2288
Bpu14I TTCGAA 2 cut(s) 706, 2026
BpuEI CTTGAG 2 cut(s) 71, 1588
BpuMI CCSGG 1 cut(s) 1542
BsaHI GRCGYC 1 cut(s) 1624
BsaI GGTCTC 1 cut(s) 1927
BsaJI CCNNGG 2 cut(s) 2066, 2403
BsaWI WCCGGW 1 cut(s) 1990
BsaXI ACNNNNNCTCC 2 cut(s) 458, 488
Bsc4I CCNNNNNNNGG 1 cut(s) 1090
Bse1I ACTGG 4 cut(s) 268, 501, 1482, 2305
BseDI CCNNGG 2 cut(s) 2066, 2403
BseGI GGATG 8 cut(s) 145, 428, 539, 550, 856, 941, 1525, 2492
BseLI CCNNNNNNNGG 1 cut(s) 1090
BseMII CTCAG 3 cut(s) 1053, 2274, 2457
BseNI ACTGG 4 cut(s) 268, 501, 1482, 2305
BseRI GAGGAG 2 cut(s) 122, 432
BseSI GKGCMC 1 cut(s) 1592
BseXI GCAGC 1 cut(s) 1183
BsgI GTGCAG 2 cut(s) 473, 1566
Bsh1236I CGCG 1 cut(s) 303
BshFI GGCC 8 cut(s) 5, 149, 408, 1107, 1246, 2355, 2387, 2519
BsiSI CCGG 2 cut(s) 1541, 1991
BslFI GGGAC 2 cut(s) 1777, 1847
BslI CCNNNNNNNGG 1 cut(s) 1090
BsmAI GTCTC 3 cut(s) 192, 1631, 1927
BsmBI CGTCTC 1 cut(s) 1631
BsmFI GGGAC 2 cut(s) 1777, 1847
BsmI GAATGC 2 cut(s) 769, 1028
BsnI GGCC 8 cut(s) 5, 149, 408, 1107, 1246, 2355, 2387, 2519
Bso31I GGTCTC 1 cut(s) 1927
Bsp119I TTCGAA 2 cut(s) 706, 2026
Bsp1286I GDGCHC 1 cut(s) 1592
Bsp143I GATC 7 cut(s) 366, 1162, 1267, 1350, 1875, 2440, 2469
Bsp19I CCATGG 1 cut(s) 2403
BspACI CCGC 5 cut(s) 143, 464, 775, 1405, 1708
BspANI GGCC 8 cut(s) 5, 149, 408, 1107, 1246, 2355, 2387, 2519
BspCNI CTCAG 3 cut(s) 1054, 2273, 2458
BspFNI CGCG 1 cut(s) 303
BspHI TCATGA 1 cut(s) 85
BspLI GGNNCC 1 cut(s) 1739
BspMAI CTGCAG 1 cut(s) 2216
BspMI ACCTGC 2 cut(s) 65, 1713
BspPI GGATC 3 cut(s) 1170, 1883, 2448
BspT104I TTCGAA 2 cut(s) 706, 2026
BspTI CTTAAG 1 cut(s) 1868
BspTNI GGTCTC 1 cut(s) 1927
BsrI ACTGG 4 cut(s) 268, 501, 1482, 2305
BssECI CCNNGG 2 cut(s) 2066, 2403
BssMI GATC 7 cut(s) 366, 1162, 1267, 1350, 1875, 2440, 2469
BssNAI GTATAC 1 cut(s) 1324
BssNI GRCGYC 1 cut(s) 1624
BssT1I CCWWGG 2 cut(s) 2066, 2403
Bst1107I GTATAC 1 cut(s) 1324
Bst4CI ACNGT 6 cut(s) 565, 673, 977, 1447, 2344, 2490
Bst6I CTCTTC 7 cut(s) 1019, 1341, 1434, 1971, 2019, 2118, 2193
BstACI GRCGYC 1 cut(s) 1624
BstAFI CTTAAG 1 cut(s) 1868
BstAPI GCANNNNNTGC 1 cut(s) 1801
BstBI TTCGAA 2 cut(s) 706, 2026
BstC8I GCNNGC 2 cut(s) 1081, 1284
BstDEI CTNAG 8 cut(s) 202, 1038, 1062, 1149, 1662, 2171, 2260, 2466
BstDSI CCRYGG 1 cut(s) 2403
BstF5I GGATG 8 cut(s) 145, 428, 539, 550, 856, 941, 1525, 2492
BstFNI CGCG 1 cut(s) 303
BstH2I RGCGCY 1 cut(s) 1775
BstHHI GCGC 2 cut(s) 305, 1774
BstKTI GATC 7 cut(s) 369, 1165, 1270, 1353, 1878, 2443, 2472
BstMAI GTCTC 3 cut(s) 192, 1631, 1927
BstMBI GATC 7 cut(s) 366, 1162, 1267, 1350, 1875, 2440, 2469
BstMWI GCNNNNNNNGC 4 cut(s) 1705, 1801, 2038, 2322
BstNSI RCATGY 3 cut(s) 250, 1201, 2480
BstPAI GACNNNNGTC 1 cut(s) 1141
BstSCI CCNGG 1 cut(s) 1540
BstSFI CTRYAG 2 cut(s) 2212, 2277
BstSLI GKGCMC 1 cut(s) 1592
BstUI CGCG 1 cut(s) 303
BstV1I GCAGC 1 cut(s) 1183
BstV2I GAAGAC 4 cut(s) 462, 495, 1137, 2345
BstX2I RGATCY 1 cut(s) 1350
BstYI RGATCY 1 cut(s) 1350
BstZ17I GTATAC 1 cut(s) 1324
BsuI GTATCC 1 cut(s) 1651
BsuRI GGCC 8 cut(s) 5, 149, 408, 1107, 1246, 2355, 2387, 2519
BtgI CCRYGG 1 cut(s) 2403
BtrI CACGTC 1 cut(s) 844
BtsCI GGATG 8 cut(s) 145, 428, 539, 550, 856, 941, 1525, 2492
BtsI GCAGTG 2 cut(s) 2078, 2150
BtsIMutI CAGTG 5 cut(s) 1475, 2078, 2150, 2268, 2349
BveI ACCTGC 2 cut(s) 65, 1713
Cac8I GCNNGC 2 cut(s) 1081, 1284
CaiI CAGNNNCTG 1 cut(s) 988
CciI TCATGA 1 cut(s) 85
CfoI GCGC 2 cut(s) 305, 1774
Cfr13I GGNCC 4 cut(s) 19, 2386, 2418, 2503
CseI GACGC 1 cut(s) 1613
Csp6I GTAC 5 cut(s) 695, 914, 1744, 2308, 2453
CviQI GTAC 5 cut(s) 695, 914, 1744, 2308, 2453
DdeI CTNAG 8 cut(s) 202, 1038, 1062, 1149, 1662, 2171, 2260, 2466
DpnI GATC 7 cut(s) 368, 1164, 1269, 1352, 1877, 2442, 2471
DpnII GATC 7 cut(s) 366, 1162, 1267, 1350, 1875, 2440, 2469
DraI TTTAAA 1 cut(s) 1578
DrdI GACNNNNNNGTC 1 cut(s) 1919
DseDI GACNNNNNNGTC 1 cut(s) 1919
Eam1104I CTCTTC 7 cut(s) 1019, 1341, 1434, 1971, 2019, 2118, 2193
EarI CTCTTC 7 cut(s) 1019, 1341, 1434, 1971, 2019, 2118, 2193
Eco130I CCWWGG 2 cut(s) 2066, 2403
Eco147I AGGCCT 2 cut(s) 1107, 2355
Eco31I GGTCTC 1 cut(s) 1927
Eco32I GATATC 1 cut(s) 223
Eco47I GGWCC 3 cut(s) 19, 2418, 2503
Eco57I CTGAAG 3 cut(s) 186, 1000, 1088
EcoRI GAATTC 1 cut(s) 233
EcoRV GATATC 1 cut(s) 223
EcoT14I CCWWGG 2 cut(s) 2066, 2403
EcoT22I ATGCAT 3 cut(s) 664, 1266, 2188
ErhI CCWWGG 2 cut(s) 2066, 2403
Esp3I CGTCTC 1 cut(s) 1631
FaqI GGGAC 2 cut(s) 1777, 1847
FauI CCCGC 1 cut(s) 1398
FauNDI CATATG 1 cut(s) 2188
FbaI TGATCA 1 cut(s) 366
FblI GTMKAC 3 cut(s) 271, 1323, 1843
Fnu4HI GCNGC 2 cut(s) 775, 1172
FokI GGATG 8 cut(s) 152, 415, 546, 557, 863, 928, 1532, 2479
Fsp4HI GCNGC 2 cut(s) 775, 1172
GlaI GCGC 2 cut(s) 304, 1773
GluI GCNGC 2 cut(s) 775, 1172
GsuI CTGGAG 1 cut(s) 2288
HaeII RGCGCY 1 cut(s) 1775
HaeIII GGCC 8 cut(s) 5, 149, 408, 1107, 1246, 2355, 2387, 2519
HapII CCGG 2 cut(s) 1541, 1991
HgaI GACGC 1 cut(s) 1613
HhaI GCGC 2 cut(s) 305, 1774
Hin1I GRCGYC 1 cut(s) 1624
Hin6I GCGC 2 cut(s) 303, 1772
HinP1I GCGC 2 cut(s) 303, 1772
HincII GTYRAC 4 cut(s) 272, 802, 1938, 2320
HindII GTYRAC 4 cut(s) 272, 802, 1938, 2320
HindIII AAGCTT 4 cut(s) 126, 709, 2030, 2228
HpaI GTTAAC 1 cut(s) 802
HpaII CCGG 2 cut(s) 1541, 1991
HphI GGTGA 3 cut(s) 616, 2005, 2302
Hpy188I TCNGA 7 cut(s) 197, 433, 444, 1272, 1828, 2163, 2427
Hpy99I CGWCG 2 cut(s) 1331, 1365
HpyCH4III ACNGT 6 cut(s) 565, 673, 977, 1447, 2344, 2490
HpyCH4IV ACGT 3 cut(s) 399, 843, 2058
HpyF10VI GCNNNNNNNGC 4 cut(s) 1705, 1801, 2038, 2322
HpyF3I CTNAG 8 cut(s) 202, 1038, 1062, 1149, 1662, 2171, 2260, 2466
HpySE526I ACGT 3 cut(s) 399, 843, 2058
Hsp92I GRCGYC 1 cut(s) 1624
HspAI GCGC 2 cut(s) 303, 1772
Ksp22I TGATCA 1 cut(s) 366
KspAI GTTAAC 1 cut(s) 802
Kzo9I GATC 7 cut(s) 366, 1162, 1267, 1350, 1875, 2440, 2469
LmnI GCTCC 2 cut(s) 310, 419
Lsp1109I GCAGC 1 cut(s) 1183
LweI GCATC 5 cut(s) 130, 950, 1251, 1263, 2283
MaeII ACGT 3 cut(s) 399, 843, 2058
MaeIII GTNAC 4 cut(s) 13, 792, 1200, 1671
MalI GATC 7 cut(s) 368, 1164, 1269, 1352, 1877, 2442, 2471
MboI GATC 7 cut(s) 366, 1162, 1267, 1350, 1875, 2440, 2469
MflI RGATCY 1 cut(s) 1350
MhlI GDGCHC 1 cut(s) 1592
MlyI GAGTC 7 cut(s) 476, 821, 918, 1498, 1622, 1679, 1933
MmeI TCCRAC 4 cut(s) 969, 1082, 2173, 2220
Mph1103I ATGCAT 3 cut(s) 664, 1266, 2188
MroXI GAANNNNTTC 5 cut(s) 128, 438, 1028, 1107, 1986
MslI CAYNNNNRTG 2 cut(s) 249, 1448
MspCI CTTAAG 1 cut(s) 1868
MspI CCGG 2 cut(s) 1541, 1991
MspR9I CCNGG 1 cut(s) 1542
Mva1269I GAATGC 2 cut(s) 769, 1028
MvnI CGCG 1 cut(s) 303
MwoI GCNNNNNNNGC 4 cut(s) 1705, 1801, 2038, 2322
NciI CCSGG 1 cut(s) 1542
NcoI CCATGG 1 cut(s) 2403
NdeI CATATG 1 cut(s) 2188
NdeII GATC 7 cut(s) 366, 1162, 1267, 1350, 1875, 2440, 2469
NlaIV GGNNCC 1 cut(s) 1739
NmeAIII GCCGAG 1 cut(s) 1095
NmuCI GTSAC 1 cut(s) 1671
NsiI ATGCAT 3 cut(s) 664, 1266, 2188
NspI RCATGY 3 cut(s) 250, 1201, 2480
NspV TTCGAA 2 cut(s) 706, 2026
PagI TCATGA 1 cut(s) 85
PaqCI CACCTGC 1 cut(s) 65
PceI AGGCCT 2 cut(s) 1107, 2355
PciI ACATGT 2 cut(s) 246, 2476
PctI GAATGC 2 cut(s) 769, 1028
PdmI GAANNNNTTC 5 cut(s) 128, 438, 1028, 1107, 1986
PfeI GAWTC 5 cut(s) 192, 388, 1420, 1711, 1823
PflFI GACNNNGTC 1 cut(s) 1445
PflMI CCANNNNNTGG 1 cut(s) 1090
PkrI GCNGC 2 cut(s) 776, 1173
PleI GAGTC 7 cut(s) 475, 820, 917, 1498, 1621, 1678, 1933
PpsI GAGTC 7 cut(s) 475, 820, 917, 1498, 1621, 1678, 1933
PscI ACATGT 2 cut(s) 246, 2476
PshAI GACNNNNGTC 1 cut(s) 1141
PshBI ATTAAT 1 cut(s) 1961
PsiI TTATAA 1 cut(s) 2414
PspN4I GGNNCC 1 cut(s) 1739
PspPI GGNCC 4 cut(s) 19, 2386, 2418, 2503
PstI CTGCAG 1 cut(s) 2216
PstNI CAGNNNCTG 1 cut(s) 988
PsuI RGATCY 1 cut(s) 1350
PsyI GACNNNGTC 1 cut(s) 1445
RsaI GTAC 5 cut(s) 696, 915, 1745, 2309, 2454
RsaNI GTAC 5 cut(s) 695, 914, 1744, 2308, 2453
RseI CAYNNNNRTG 2 cut(s) 249, 1448
SalI GTCGAC 1 cut(s) 270
SatI GCNGC 2 cut(s) 775, 1172
Sau3AI GATC 7 cut(s) 366, 1162, 1267, 1350, 1875, 2440, 2469
Sau96I GGNCC 4 cut(s) 19, 2386, 2418, 2503
ScaI AGTACT 1 cut(s) 2309
SchI GAGTC 7 cut(s) 476, 821, 918, 1498, 1622, 1679, 1933
ScrFI CCNGG 1 cut(s) 1542
SduI GDGCHC 1 cut(s) 1592
SfaNI GCATC 5 cut(s) 130, 950, 1251, 1263, 2283
SfcI CTRYAG 2 cut(s) 2212, 2277
SfuI TTCGAA 2 cut(s) 706, 2026
SinI GGWCC 3 cut(s) 19, 2418, 2503
SmiI ATTTAAAT 1 cut(s) 1578
SmiMI CAYNNNNRTG 2 cut(s) 249, 1448
SmlI CTYRAG 3 cut(s) 50, 1567, 1868
SmoI CTYRAG 3 cut(s) 50, 1567, 1868
SpeI ACTAGT 1 cut(s) 796
SseBI AGGCCT 2 cut(s) 1107, 2355
SsiI CCGC 5 cut(s) 143, 464, 775, 1405, 1708
SspI AATATT 2 cut(s) 1783, 2381
StuI AGGCCT 2 cut(s) 1107, 2355
StyD4I CCNGG 1 cut(s) 1540
StyI CCWWGG 2 cut(s) 2066, 2403
SwaI ATTTAAAT 1 cut(s) 1578
TaaI ACNGT 6 cut(s) 565, 673, 977, 1447, 2344, 2490
TaiI ACGT 3 cut(s) 402, 846, 2061
TaqI TCGA 7 cut(s) 271, 706, 907, 925, 1292, 1886, 2026
TatI WGTACW 3 cut(s) 1743, 2307, 2452
TauI GCSGC 1 cut(s) 777
TfiI GAWTC 5 cut(s) 192, 388, 1420, 1711, 1823
TscAI CASTG 5 cut(s) 1482, 2085, 2157, 2268, 2349
TseFI GTSAC 1 cut(s) 1671
TseI GCWGC 1 cut(s) 1171
Tsp45I GTSAC 1 cut(s) 1671
TspGWI ACGGA 1 cut(s) 32
TspRI CASTG 5 cut(s) 1482, 2085, 2157, 2268, 2349
Tth111I GACNNNGTC 1 cut(s) 1445
Van91I CCANNNNNTGG 1 cut(s) 1090
Vha464I CTTAAG 1 cut(s) 1868
VpaK11BI GGWCC 3 cut(s) 19, 2418, 2503
VspI ATTAAT 1 cut(s) 1961
XapI RAATTY 8 cut(s) 233, 445, 646, 745, 1253, 1579, 1983, 2251
XbaI TCTAGA 2 cut(s) 835, 1507
XceI RCATGY 3 cut(s) 250, 1201, 2480
XcmI CCANNNNNNNNNTGG 1 cut(s) 315
XmiI GTMKAC 3 cut(s) 271, 1323, 1843
XmnI GAANNNNTTC 5 cut(s) 128, 438, 1028, 1107, 1986
ZrmI AGTACT 1 cut(s) 2309
Zsp2I ATGCAT 3 cut(s) 664, 1266, 2188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.