Rmu_ssc0000187.1_g000004

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000187.1
OG0000110
Physical Location & Seq
Reverse (-)
24900 .. 27302
2403 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000187.1_g000004.1.cds

Sequence Viewer

Length: 1935 bp
atggcgttagcggcccaagatctcttgcttggtaaaattgtagccattcttgagaatgaagtatccttcatagccagtgttcacgataaatttgatgacattaaacaagagcttgtaagcatgaaagccttcctaaaggatgttgagggaaagaaagcacaatcggagggaggggagacatggataacaagcgtgagagactctgtctatgacattgaagatatcattgatgaattcacatatcgcatctataagcgtcaaatcgctaaaaaattagaaaaaatcaaaggaaccattaaagccatttgggagaggaatcagacatatggtgttagtgttgttactgctctagaaggaacgagtgattctcatgatcatattcaaaaatggatgtggaaccgagcagaggcttctctctttaccaatgaagatgagcttgtcgggattgaagcccccaaaagagtattaatggaacatatagtgaatgaactacaaagccaaagcatagtctccgtgtgggcggaccgctactctgaggatttgatggcctccgctagctgtcacacgagagacagggcatcagagggagaccgcgttgggcggtcttcacttctccgatgcctaagtgaggagaaggttgatcctcatcttgtcttcgatgtgggactgatgtgcttcgattcccagcgtctggaacttctgaagctatcttggcgtggtacgtggcggcgcgtcagcggtgatatgagggcgatccaacttggccgtgctttcgcaggtcactccattggtaggagtcggtacaacattgtaaagagacatttcaatttctatgcatgcgttacagtttcccaaacttatgtgattgaagacttatttagaagcttgatcaagcaattccatgaagcaaggaaggaggaggttctaagagacattgatatgatgagctttagagaattggtagagattcttgtgaactacttgaactcgaaaaagtatctagttgtgctggatgatgtatgggatataaatctttgggcacaaataagggtatcacttcaagatagacaacttggaagtcgagttgtactcaccactcgaaatgatgatatagcaagctttgcttttggagttgcaagccatgttcaccatattcaacccctgggaaagaagaacacttgggagctttttgcaaggagacattctctactcatcctaacaaatcttgtccacttcaacttgagccatttgctcgggaacttgtggggaagtagcattttattgctcagtttcaatgacttgtcgtaccgattcaagcattgtttcctatactattctcttgttccagaagactatttaatgagaagaaaacgactcattagattgtggatagctgaaggattcattgaacatgtgaaaggtgtcacactggaagtgattgcagatagatatctttcggaactttattttcgtagcatgctacaagttgtggagaggaatgaagaaggaaggtcaaaacaatgcaggatgcatgatgtcatgcgtgagcttgctctttcaacatctgagaaagaaaagttttgtgctgtgtatgatgggaaagatgaagcaattgaagcccgccgtttgtcagttcaatttgaaggagaaattaaatccagcacaggtatatcacagcttcgatctattcttatccttgtcaaagagactacgttgccttctgattgcaaattttttagggtgctagacttggagaatgtgttaataactaaactgccagatgatcttgggtacttgttcaacttaagatatttaaatttgaggagaactcatatcaaggagtttccaaaatccataggaaagctacgcaaccttcaaaccttgaacatccacgaaagtaagatagaggaacttccaaaagaaattgccaagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

644

Amino Acids

74.77

Weight (kDa)

7.66

Isoelectric Point (pI)

48.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 767
AccB7I CCANNNNNTGG 1 cut(s) 691
AccII CGCG 2 cut(s) 594, 732
AciI CCGC 9 cut(s) 11, 521, 526, 552, 592, 601, 727, 738, 1621
AclWI GGATC 2 cut(s) 635, 748
AcoI YGGCCR 1 cut(s) 763
AcsI RAATTY 4 cut(s) 89, 233, 1730, 1816
AcuI CTGAAG 2 cut(s) 722, 1416
AfaI GTAC 5 cut(s) 721, 803, 1089, 1307, 1793
AfiI CCNNNNNNNGG 4 cut(s) 406, 628, 691, 792
AflII CTTAAG 1 cut(s) 1804
AflIII ACRYGT 1 cut(s) 1411
AjnI CCWGG 1 cut(s) 1161
Alw26I GTCTC 9 cut(s) 170, 192, 514, 564, 582, 811, 924, 1192, 1700
AlwI GGATC 2 cut(s) 635, 748
AlwNI CAGNNNCTG 1 cut(s) 691
Ama87I CYCGRG 1 cut(s) 1253
AoxI GGCC 3 cut(s) 12, 546, 763
ApoI RAATTY 4 cut(s) 89, 233, 1730, 1816
AseI ATTAAT 1 cut(s) 467
Asp700I GAANNNNTTC 1 cut(s) 128
AspLEI GCGC 1 cut(s) 732
AspS9I GGNCC 2 cut(s) 13, 523
AsuHPI GGTGA 3 cut(s) 752, 1084, 1139
AsuNHI GCTAGC 1 cut(s) 554
AvaI CYCGRG 1 cut(s) 1253
AvaII GGWCC 1 cut(s) 523
BaeGI GKGCMC 1 cut(s) 1042
BauI CACGAG 1 cut(s) 565
BbsI GAAGAC 4 cut(s) 597, 646, 876, 1356
BccI CCATC 2 cut(s) 538, 1589
BceAI ACGGC 2 cut(s) 750, 1608
BciT130I CCWGG 1 cut(s) 1163
BciVI GTATCC 1 cut(s) 73
BclI TGATCA 2 cut(s) 373, 888
BcoDI GTCTC 9 cut(s) 170, 192, 514, 564, 582, 811, 924, 1192, 1700
BfaI CTAG 4 cut(s) 350, 555, 1001, 1745
BfrI CTTAAG 1 cut(s) 1804
BfuAI ACCTGC 1 cut(s) 767
BfuI GTATCC 1 cut(s) 73
BglII AGATCT 1 cut(s) 19
BisI GCNGC 2 cut(s) 12, 728
BlsI GCNGC 2 cut(s) 13, 729
Bme1390I CCNGG 1 cut(s) 1163
Bme18I GGWCC 1 cut(s) 523
BmeT110I CYCGRG 1 cut(s) 1253
BmgT120I GGNCC 2 cut(s) 13, 523
BmiI GGNNCC 2 cut(s) 292, 398
BmrFI CCNGG 1 cut(s) 1163
BmsI GCATC 4 cut(s) 255, 587, 608, 1518
BmtI GCTAGC 1 cut(s) 558
BpiI GAAGAC 4 cut(s) 597, 646, 876, 1356
BplI GAGNNNNNCTC 8 cut(s) 352, 384, 1074, 1106, 1189, 1221, 1813, 1845
BpuEI CTTGAG 2 cut(s) 71, 1261
BsaAI YACGTR 1 cut(s) 723
BsaBI GATNNNNATC 3 cut(s) 645, 1029, 1449
BsaI GGTCTC 1 cut(s) 582
BsaJI CCNNGG 2 cut(s) 1161, 1162
BsaXI ACNNNNNCTCC 4 cut(s) 579, 609, 1745, 1775
Bsc4I CCNNNNNNNGG 4 cut(s) 406, 628, 691, 792
Bse1I ACTGG 2 cut(s) 75, 1434
Bse8I GATNNNNATC 3 cut(s) 645, 1029, 1449
BseBI CCWGG 1 cut(s) 1163
BseDI CCNNGG 2 cut(s) 1161, 1162
BseGI GGATG 6 cut(s) 145, 396, 1018, 1212, 1533, 1887
BseJI GATNNNNATC 3 cut(s) 645, 1029, 1449
BseLI CCNNNNNNNGG 4 cut(s) 406, 628, 691, 792
BseMII CTCAG 3 cut(s) 525, 1300, 1557
BseNI ACTGG 2 cut(s) 75, 1434
BseRI GAGGAG 3 cut(s) 644, 932, 1837
BseSI GKGCMC 1 cut(s) 1042
BseYI CCCAGC 1 cut(s) 684
Bsh1236I CGCG 2 cut(s) 594, 732
BshFI GGCC 3 cut(s) 14, 548, 765
BsiHKCI CYCGRG 1 cut(s) 1253
BslFI GGGAC 1 cut(s) 678
BslI CCNNNNNNNGG 4 cut(s) 406, 628, 691, 792
BsmAI GTCTC 9 cut(s) 170, 192, 514, 564, 582, 811, 924, 1192, 1700
BsmFI GGGAC 1 cut(s) 678
BsnI GGCC 3 cut(s) 14, 548, 765
Bso31I GGTCTC 1 cut(s) 582
BsoBI CYCGRG 1 cut(s) 1253
Bsp1286I GDGCHC 1 cut(s) 1042
Bsp143I GATC 7 cut(s) 19, 373, 640, 753, 888, 1682, 1783
BspACI CCGC 9 cut(s) 11, 521, 526, 552, 592, 601, 727, 738, 1621
BspANI GGCC 3 cut(s) 14, 548, 765
BspCNI CTCAG 3 cut(s) 526, 1299, 1558
BspFNI CGCG 2 cut(s) 594, 732
BspHI TCATGA 1 cut(s) 370
BspLI GGNNCC 2 cut(s) 292, 398
BspMI ACCTGC 1 cut(s) 767
BspOI GCTAGC 1 cut(s) 558
BspPI GGATC 2 cut(s) 635, 748
BspTI CTTAAG 1 cut(s) 1804
BspTNI GGTCTC 1 cut(s) 582
BsrI ACTGG 2 cut(s) 75, 1434
BssECI CCNNGG 2 cut(s) 1161, 1162
BssMI GATC 7 cut(s) 19, 373, 640, 753, 888, 1682, 1783
BssSI CACGAG 1 cut(s) 565
Bst2BI CACGAG 1 cut(s) 565
Bst2UI CCWGG 1 cut(s) 1163
Bst4CI ACNGT 1 cut(s) 847
BstAFI CTTAAG 1 cut(s) 1804
BstAPI GCANNNNNTGC 1 cut(s) 1121
BstBAI YACGTR 1 cut(s) 723
BstC8I GCNNGC 7 cut(s) 556, 838, 1117, 1138, 1478, 1551, 1621
BstDEI CTNAG 5 cut(s) 534, 623, 926, 1286, 1566
BstENI CCTNNNNNAGG 1 cut(s) 626
BstF5I GGATG 6 cut(s) 145, 396, 1018, 1212, 1533, 1887
BstFNI CGCG 2 cut(s) 594, 732
BstHHI GCGC 1 cut(s) 732
BstKTI GATC 7 cut(s) 22, 376, 643, 756, 891, 1685, 1786
BstMAI GTCTC 9 cut(s) 170, 192, 514, 564, 582, 811, 924, 1192, 1700
BstMBI GATC 7 cut(s) 19, 373, 640, 753, 888, 1682, 1783
BstMWI GCNNNNNNNGC 4 cut(s) 11, 712, 1121, 1616
BstNI CCWGG 1 cut(s) 1163
BstNSI RCATGY 3 cut(s) 840, 1415, 1480
BstSCI CCNGG 1 cut(s) 1161
BstSLI GKGCMC 1 cut(s) 1042
BstUI CGCG 2 cut(s) 594, 732
BstV2I GAAGAC 4 cut(s) 597, 646, 876, 1356
BstX2I RGATCY 1 cut(s) 19
BstYI RGATCY 1 cut(s) 19
BsuI GTATCC 1 cut(s) 73
BsuRI GGCC 3 cut(s) 14, 548, 765
BtsCI GGATG 6 cut(s) 145, 396, 1018, 1212, 1533, 1887
BtsIMutI CAGTG 2 cut(s) 82, 1427
BveI ACCTGC 1 cut(s) 767
Cac8I GCNNGC 7 cut(s) 556, 838, 1117, 1138, 1478, 1551, 1621
CaiI CAGNNNCTG 1 cut(s) 691
CciI TCATGA 1 cut(s) 370
CfoI GCGC 1 cut(s) 732
Cfr13I GGNCC 2 cut(s) 13, 523
CpoI CGGWCCG 1 cut(s) 523
CseI GACGC 3 cut(s) 245, 677, 721
Csp6I GTAC 5 cut(s) 720, 802, 1088, 1306, 1792
CspI CGGWCCG 1 cut(s) 523
CviQI GTAC 5 cut(s) 720, 802, 1088, 1306, 1792
DdeI CTNAG 5 cut(s) 534, 623, 926, 1286, 1566
DpnI GATC 7 cut(s) 21, 375, 642, 755, 890, 1684, 1785
DpnII GATC 7 cut(s) 19, 373, 640, 753, 888, 1682, 1783
DraI TTTAAA 1 cut(s) 1815
EaeI YGGCCR 1 cut(s) 763
EciI GGCGGA 1 cut(s) 536
Eco31I GGTCTC 1 cut(s) 582
Eco32I GATATC 2 cut(s) 223, 1451
Eco47I GGWCC 1 cut(s) 523
Eco57I CTGAAG 2 cut(s) 722, 1416
Eco88I CYCGRG 1 cut(s) 1253
EcoNI CCTNNNNNAGG 1 cut(s) 626
EcoRI GAATTC 1 cut(s) 233
EcoRII CCWGG 1 cut(s) 1161
EcoRV GATATC 2 cut(s) 223, 1451
EcoT22I ATGCAT 2 cut(s) 838, 1533
FalI AAGNNNNNCTT 4 cut(s) 420, 452, 1108, 1140
FaqI GGGAC 1 cut(s) 678
FauI CCCGC 1 cut(s) 1628
FauNDI CATATG 1 cut(s) 325
FbaI TGATCA 2 cut(s) 373, 888
Fnu4HI GCNGC 2 cut(s) 12, 728
FokI GGATG 6 cut(s) 152, 403, 1025, 1199, 1540, 1874
Fsp4HI GCNGC 2 cut(s) 12, 728
FspBI CTAG 4 cut(s) 350, 555, 1001, 1745
GlaI GCGC 1 cut(s) 731
GluI GCNGC 2 cut(s) 12, 728
GsaI CCCAGC 1 cut(s) 688
HaeIII GGCC 3 cut(s) 14, 548, 765
HgaI GACGC 3 cut(s) 245, 677, 721
HhaI GCGC 1 cut(s) 732
Hin6I GCGC 1 cut(s) 730
HinP1I GCGC 1 cut(s) 730
HindIII AAGCTT 2 cut(s) 883, 1117
HinfI GANTC 9 cut(s) 200, 316, 365, 680, 796, 967, 1311, 1374, 1401
HphI GGTGA 3 cut(s) 752, 1084, 1139
Hpy166II GTNNAC 4 cut(s) 82, 976, 1147, 1231
Hpy188I TCNGA 9 cut(s) 166, 321, 535, 583, 617, 702, 1459, 1567, 1723
Hpy188III TCNNGA 9 cut(s) 50, 83, 350, 371, 442, 692, 1061, 1255, 1346
Hpy8I GTNNAC 4 cut(s) 82, 976, 1147, 1231
HpyCH4III ACNGT 1 cut(s) 847
HpyCH4IV ACGT 2 cut(s) 722, 1712
HpyCH4V TGCA 7 cut(s) 836, 1136, 1193, 1442, 1524, 1531, 1728
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 712, 1121, 1616
HpyF3I CTNAG 5 cut(s) 534, 623, 926, 1286, 1566
HpySE526I ACGT 2 cut(s) 722, 1712
HspAI GCGC 1 cut(s) 730
Ksp22I TGATCA 2 cut(s) 373, 888
Kzo9I GATC 7 cut(s) 19, 373, 640, 753, 888, 1682, 1783
LmnI GCTCC 1 cut(s) 1183
LweI GCATC 4 cut(s) 255, 587, 608, 1518
MaeI CTAG 4 cut(s) 350, 555, 1001, 1745
MaeII ACGT 2 cut(s) 722, 1712
MaeIII GTNAC 5 cut(s) 340, 560, 779, 841, 1423
MalI GATC 7 cut(s) 21, 375, 642, 755, 890, 1684, 1785
MboI GATC 7 cut(s) 19, 373, 640, 753, 888, 1682, 1783
MboII GAAGA 9 cut(s) 230, 440, 597, 646, 881, 1183, 1361, 1377, 1514
MfeI CAATTG 1 cut(s) 1611
MflI RGATCY 1 cut(s) 19
MhlI GDGCHC 1 cut(s) 1042
MlyI GAGTC 3 cut(s) 194, 805, 1368
MmeI TCCRAC 1 cut(s) 781
Mph1103I ATGCAT 2 cut(s) 838, 1533
MroXI GAANNNNTTC 1 cut(s) 128
MseI TTAA 8 cut(s) 102, 297, 467, 1358, 1653, 1763, 1805, 1814
MslI CAYNNNNRTG 1 cut(s) 938
MspA1I CMGCKG 1 cut(s) 738
MspCI CTTAAG 1 cut(s) 1804
MspR9I CCNGG 1 cut(s) 1163
MunI CAATTG 1 cut(s) 1611
MvaI CCWGG 1 cut(s) 1163
MvnI CGCG 2 cut(s) 594, 732
MwoI GCNNNNNNNGC 4 cut(s) 11, 712, 1121, 1616
NdeI CATATG 1 cut(s) 325
NdeII GATC 7 cut(s) 19, 373, 640, 753, 888, 1682, 1783
NheI GCTAGC 1 cut(s) 554
NlaIV GGNNCC 2 cut(s) 292, 398
NmuCI GTSAC 3 cut(s) 560, 779, 1423
NsiI ATGCAT 2 cut(s) 838, 1533
NspI RCATGY 3 cut(s) 840, 1415, 1480
PaeI GCATGC 2 cut(s) 840, 1480
PagI TCATGA 1 cut(s) 370
PasI CCCWGGG 1 cut(s) 1162
PciI ACATGT 1 cut(s) 1411
PdmI GAANNNNTTC 1 cut(s) 128
PfeI GAWTC 6 cut(s) 316, 365, 680, 967, 1311, 1401
PflFI GACNNNGTC 1 cut(s) 203
PflMI CCANNNNNTGG 1 cut(s) 691
PkrI GCNGC 2 cut(s) 13, 729
PleI GAGTC 3 cut(s) 194, 804, 1368
PpsI GAGTC 3 cut(s) 194, 804, 1368
Ppu21I YACGTR 1 cut(s) 723
PscI ACATGT 1 cut(s) 1411
PshBI ATTAAT 1 cut(s) 467
Psp6I CCWGG 1 cut(s) 1161
PspFI CCCAGC 1 cut(s) 684
PspGI CCWGG 1 cut(s) 1161
PspN4I GGNNCC 2 cut(s) 292, 398
PspPI GGNCC 2 cut(s) 13, 523
PstNI CAGNNNCTG 1 cut(s) 691
PsuI RGATCY 1 cut(s) 19
PsyI GACNNNGTC 1 cut(s) 203
RsaI GTAC 5 cut(s) 721, 803, 1089, 1307, 1793
RsaNI GTAC 5 cut(s) 720, 802, 1088, 1306, 1792
RseI CAYNNNNRTG 1 cut(s) 938
Rsr2I CGGWCCG 1 cut(s) 523
RsrII CGGWCCG 1 cut(s) 523
SaqAI TTAA 8 cut(s) 102, 297, 467, 1358, 1653, 1763, 1805, 1814
SatI GCNGC 2 cut(s) 12, 728
Sau3AI GATC 7 cut(s) 19, 373, 640, 753, 888, 1682, 1783
Sau96I GGNCC 2 cut(s) 13, 523
SchI GAGTC 3 cut(s) 194, 805, 1368
ScrFI CCNGG 1 cut(s) 1163
SduI GDGCHC 1 cut(s) 1042
SfaNI GCATC 4 cut(s) 255, 587, 608, 1518
SinI GGWCC 1 cut(s) 523
SmiI ATTTAAAT 1 cut(s) 1815
SmiMI CAYNNNNRTG 1 cut(s) 938
SmlI CTYRAG 3 cut(s) 50, 1240, 1804
SmoI CTYRAG 3 cut(s) 50, 1240, 1804
SphI GCATGC 2 cut(s) 840, 1480
SsiI CCGC 9 cut(s) 11, 521, 526, 552, 592, 601, 727, 738, 1621
SspMI CTAG 4 cut(s) 350, 555, 1001, 1745
StyD4I CCNGG 1 cut(s) 1161
SwaI ATTTAAAT 1 cut(s) 1815
TaaI ACNGT 1 cut(s) 847
TaiI ACGT 2 cut(s) 725, 1715
TaqI TCGA 6 cut(s) 657, 678, 989, 1081, 1099, 1681
TatI WGTACW 1 cut(s) 1087
TauI GCSGC 2 cut(s) 14, 730
TfiI GAWTC 6 cut(s) 316, 365, 680, 967, 1311, 1401
Tru1I TTAA 8 cut(s) 102, 297, 467, 1358, 1653, 1763, 1805, 1814
Tru9I TTAA 8 cut(s) 102, 297, 467, 1358, 1653, 1763, 1805, 1814
TscAI CASTG 2 cut(s) 82, 1434
TseFI GTSAC 3 cut(s) 560, 779, 1423
Tsp45I GTSAC 3 cut(s) 560, 779, 1423
TspGWI ACGGA 1 cut(s) 502
TspRI CASTG 2 cut(s) 82, 1434
Tth111I GACNNNGTC 1 cut(s) 203
Van91I CCANNNNNTGG 1 cut(s) 691
Vha464I CTTAAG 1 cut(s) 1804
VpaK11BI GGWCC 1 cut(s) 523
VspI ATTAAT 1 cut(s) 467
XagI CCTNNNNNAGG 1 cut(s) 626
XapI RAATTY 4 cut(s) 89, 233, 1730, 1816
XbaI TCTAGA 1 cut(s) 349
XceI RCATGY 3 cut(s) 840, 1415, 1480
XmnI GAANNNNTTC 1 cut(s) 128
XspI CTAG 4 cut(s) 350, 555, 1001, 1745
Zsp2I ATGCAT 2 cut(s) 838, 1533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.