Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 823 |
| AccI | GTMKAC | 1 cut(s) | 492 |
| AccII | CGCG | 1 cut(s) | 389 |
| AccIII | TCCGGA | 1 cut(s) | 676 |
| AciI | CCGC | 3 cut(s) | 65, 339, 389 |
| AcsI | RAATTY | 3 cut(s) | 398, 478, 500 |
| AcuI | CTGAAG | 2 cut(s) | 182, 444 |
| AfaI | GTAC | 2 cut(s) | 43, 361 |
| AgsI | TTSAA | 6 cut(s) | 11, 55, 154, 247, 404, 769 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 688, 720 |
| AluBI | AGCT | 2 cut(s) | 61, 811 |
| AluI | AGCT | 2 cut(s) | 61, 811 |
| Alw26I | GTCTC | 2 cut(s) | 389, 743 |
| Aor13HI | TCCGGA | 1 cut(s) | 676 |
| ApeKI | GCWGC | 1 cut(s) | 58 |
| ApoI | RAATTY | 3 cut(s) | 398, 478, 500 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 639 |
| AspLEI | GCGC | 1 cut(s) | 782 |
| AspS9I | GGNCC | 1 cut(s) | 546 |
| AsuHPI | GGTGA | 2 cut(s) | 644, 753 |
| AvaII | GGWCC | 1 cut(s) | 546 |
| BbvI | GCAGC | 1 cut(s) | 70 |
| BccI | CCATC | 3 cut(s) | 74, 403, 463 |
| BcoDI | GTCTC | 2 cut(s) | 389, 743 |
| BfaI | CTAG | 1 cut(s) | 45 |
| BisI | GCNGC | 1 cut(s) | 59 |
| BlsI | GCNGC | 1 cut(s) | 60 |
| Bme18I | GGWCC | 1 cut(s) | 546 |
| BmgT120I | GGNCC | 1 cut(s) | 546 |
| BmiI | GGNNCC | 1 cut(s) | 35 |
| BmsI | GCATC | 1 cut(s) | 282 |
| BsaBI | GATNNNNATC | 1 cut(s) | 246 |
| BsaI | GGTCTC | 1 cut(s) | 389 |
| BsaJI | CCNNGG | 1 cut(s) | 660 |
| BsaWI | WCCGGW | 1 cut(s) | 676 |
| Bse3DI | GCAATG | 2 cut(s) | 141, 789 |
| Bse8I | GATNNNNATC | 1 cut(s) | 246 |
| BseAI | TCCGGA | 1 cut(s) | 676 |
| BseDI | CCNNGG | 1 cut(s) | 660 |
| BseJI | GATNNNNATC | 1 cut(s) | 246 |
| BseMI | GCAATG | 2 cut(s) | 141, 789 |
| BseMII | CTCAG | 1 cut(s) | 743 |
| BseRI | GAGGAG | 3 cut(s) | 407, 717, 731 |
| BseXI | GCAGC | 1 cut(s) | 70 |
| Bsh1236I | CGCG | 1 cut(s) | 389 |
| BsiSI | CCGG | 1 cut(s) | 677 |
| BsmAI | GTCTC | 2 cut(s) | 389, 743 |
| Bso31I | GGTCTC | 1 cut(s) | 389 |
| Bsp13I | TCCGGA | 1 cut(s) | 676 |
| BspACI | CCGC | 3 cut(s) | 65, 339, 389 |
| BspCNI | CTCAG | 1 cut(s) | 742 |
| BspEI | TCCGGA | 1 cut(s) | 676 |
| BspFNI | CGCG | 1 cut(s) | 389 |
| BspLI | GGNNCC | 1 cut(s) | 35 |
| BspQI | GCTCTTC | 1 cut(s) | 177 |
| BspTNI | GGTCTC | 1 cut(s) | 389 |
| BsrDI | GCAATG | 2 cut(s) | 141, 789 |
| BssECI | CCNNGG | 1 cut(s) | 660 |
| BssNAI | GTATAC | 1 cut(s) | 493 |
| BssT1I | CCWWGG | 1 cut(s) | 660 |
| Bst1107I | GTATAC | 1 cut(s) | 493 |
| Bst6I | CTCTTC | 2 cut(s) | 177, 255 |
| BstDEI | CTNAG | 2 cut(s) | 335, 729 |
| BstFNI | CGCG | 1 cut(s) | 389 |
| BstHHI | GCGC | 1 cut(s) | 782 |
| BstMAI | GTCTC | 2 cut(s) | 389, 743 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 64, 289 |
| BstNSI | RCATGY | 1 cut(s) | 604 |
| BstUI | CGCG | 1 cut(s) | 389 |
| BstV1I | GCAGC | 1 cut(s) | 70 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 503 |
| BstZ17I | GTATAC | 1 cut(s) | 493 |
| BtsIMutI | CAGTG | 1 cut(s) | 737 |
| CfoI | GCGC | 1 cut(s) | 782 |
| Cfr13I | GGNCC | 1 cut(s) | 546 |
| Csp6I | GTAC | 2 cut(s) | 42, 360 |
| CviAII | CATG | 3 cut(s) | 225, 497, 601 |
| CviJI | RGCY | 8 cut(s) | 61, 167, 187, 297, 329, 447, 659, 811 |
| CviKI_1 | RGCY | 8 cut(s) | 61, 167, 187, 297, 329, 447, 659, 811 |
| CviQI | GTAC | 2 cut(s) | 42, 360 |
| DdeI | CTNAG | 2 cut(s) | 335, 729 |
| Eam1104I | CTCTTC | 2 cut(s) | 177, 255 |
| EarI | CTCTTC | 2 cut(s) | 177, 255 |
| Eco130I | CCWWGG | 1 cut(s) | 660 |
| Eco31I | GGTCTC | 1 cut(s) | 389 |
| Eco47I | GGWCC | 1 cut(s) | 546 |
| Eco57I | CTGAAG | 2 cut(s) | 182, 444 |
| EcoRI | GAATTC | 1 cut(s) | 478 |
| EcoT14I | CCWWGG | 1 cut(s) | 660 |
| EcoT22I | ATGCAT | 1 cut(s) | 620 |
| ErhI | CCWWGG | 1 cut(s) | 660 |
| FaeI | CATG | 3 cut(s) | 228, 500, 604 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 281, 313, 688, 720 |
| FatI | CATG | 3 cut(s) | 224, 496, 600 |
| FauI | CCCGC | 1 cut(s) | 332 |
| FblI | GTMKAC | 1 cut(s) | 492 |
| Fnu4HI | GCNGC | 1 cut(s) | 59 |
| Fsp4HI | GCNGC | 1 cut(s) | 59 |
| FspBI | CTAG | 1 cut(s) | 45 |
| GlaI | GCGC | 1 cut(s) | 781 |
| GluI | GCNGC | 1 cut(s) | 59 |
| HapII | CCGG | 1 cut(s) | 677 |
| HhaI | GCGC | 1 cut(s) | 782 |
| Hin1II | CATG | 3 cut(s) | 228, 500, 604 |
| Hin6I | GCGC | 1 cut(s) | 780 |
| HinP1I | GCGC | 1 cut(s) | 780 |
| HincII | GTYRAC | 1 cut(s) | 606 |
| HindII | GTYRAC | 1 cut(s) | 606 |
| HinfI | GANTC | 2 cut(s) | 134, 539 |
| HpaII | CCGG | 1 cut(s) | 677 |
| HphI | GGTGA | 2 cut(s) | 644, 753 |
| Hpy166II | GTNNAC | 2 cut(s) | 493, 606 |
| Hpy188III | TCNNGA | 1 cut(s) | 677 |
| Hpy8I | GTNNAC | 2 cut(s) | 493, 606 |
| HpyAV | CCTTC | 3 cut(s) | 341, 350, 514 |
| HpyCH4V | TGCA | 6 cut(s) | 146, 273, 561, 618, 774, 800 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 64, 289 |
| HpyF3I | CTNAG | 2 cut(s) | 335, 729 |
| Hsp92II | CATG | 3 cut(s) | 228, 500, 604 |
| HspAI | GCGC | 1 cut(s) | 780 |
| Kpn2I | TCCGGA | 1 cut(s) | 676 |
| LguI | GCTCTTC | 1 cut(s) | 177 |
| LmnI | GCTCC | 2 cut(s) | 442, 808 |
| LpnPI | CCDG | 8 cut(s) | 84, 105, 185, 278, 436, 447, 582, 690 |
| Lsp1109I | GCAGC | 1 cut(s) | 70 |
| LweI | GCATC | 1 cut(s) | 282 |
| MaeI | CTAG | 1 cut(s) | 45 |
| MaeIII | GTNAC | 3 cut(s) | 17, 623, 700 |
| MboII | GAAGA | 4 cut(s) | 194, 272, 632, 692 |
| MluCI | AATT | 4 cut(s) | 398, 478, 500, 709 |
| MnlI | CCTC | 7 cut(s) | 346, 385, 529, 565, 591, 709, 738 |
| Mph1103I | ATGCAT | 1 cut(s) | 620 |
| MroI | TCCGGA | 1 cut(s) | 676 |
| MroXI | GAANNNNTTC | 1 cut(s) | 639 |
| MseI | TTAA | 1 cut(s) | 594 |
| MslI | CAYNNNNRTG | 1 cut(s) | 613 |
| MspI | CCGG | 1 cut(s) | 677 |
| MvnI | CGCG | 1 cut(s) | 389 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 64, 289 |
| NlaIII | CATG | 3 cut(s) | 228, 500, 604 |
| NlaIV | GGNNCC | 1 cut(s) | 35 |
| NmuCI | GTSAC | 2 cut(s) | 623, 700 |
| NsiI | ATGCAT | 1 cut(s) | 620 |
| NspI | RCATGY | 1 cut(s) | 604 |
| PciSI | GCTCTTC | 1 cut(s) | 177 |
| PdmI | GAANNNNTTC | 1 cut(s) | 639 |
| PfeI | GAWTC | 2 cut(s) | 134, 539 |
| PkrI | GCNGC | 1 cut(s) | 60 |
| PsiI | TTATAA | 1 cut(s) | 823 |
| PspN4I | GGNNCC | 1 cut(s) | 35 |
| PspPI | GGNCC | 1 cut(s) | 546 |
| RsaI | GTAC | 2 cut(s) | 43, 361 |
| RsaNI | GTAC | 2 cut(s) | 42, 360 |
| RseI | CAYNNNNRTG | 1 cut(s) | 613 |
| SapI | GCTCTTC | 1 cut(s) | 177 |
| SaqAI | TTAA | 1 cut(s) | 594 |
| SatI | GCNGC | 1 cut(s) | 59 |
| Sau96I | GGNCC | 1 cut(s) | 546 |
| SetI | ASST | 9 cut(s) | 63, 73, 159, 204, 361, 576, 583, 613, 813 |
| SfaNI | GCATC | 1 cut(s) | 282 |
| SinI | GGWCC | 1 cut(s) | 546 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 613 |
| Sse9I | AATT | 4 cut(s) | 398, 478, 500, 709 |
| SsiI | CCGC | 3 cut(s) | 65, 339, 389 |
| SspI | AATATT | 1 cut(s) | 590 |
| SspMI | CTAG | 1 cut(s) | 45 |
| StyI | CCWWGG | 1 cut(s) | 660 |
| TaqII | GACCGA | 1 cut(s) | 563 |
| TasI | AATT | 4 cut(s) | 398, 478, 500, 709 |
| TatI | WGTACW | 1 cut(s) | 41 |
| TfiI | GAWTC | 2 cut(s) | 134, 539 |
| Tru1I | TTAA | 1 cut(s) | 594 |
| Tru9I | TTAA | 1 cut(s) | 594 |
| TscAI | CASTG | 1 cut(s) | 737 |
| TseFI | GTSAC | 2 cut(s) | 623, 700 |
| TseI | GCWGC | 1 cut(s) | 58 |
| Tsp45I | GTSAC | 2 cut(s) | 623, 700 |
| TspDTI | ATGAA | 4 cut(s) | 195, 213, 513, 533 |
| TspRI | CASTG | 1 cut(s) | 737 |
| VpaK11BI | GGWCC | 1 cut(s) | 546 |
| XapI | RAATTY | 3 cut(s) | 398, 478, 500 |
| XceI | RCATGY | 1 cut(s) | 604 |
| XmiI | GTMKAC | 1 cut(s) | 492 |
| XmnI | GAANNNNTTC | 1 cut(s) | 639 |
| XspI | CTAG | 1 cut(s) | 45 |
| Zsp2I | ATGCAT | 1 cut(s) | 620 |