Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 17 - 99 | 9.7e-23 | Rx N-terminal domain |
| NB-ARC | PF00931 | 182 - 356 | 3.5e-48 | NB-ARC domain |
| WHD_DRP | PF23559 | 444 - 515 | 1.2e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 559 - 886 | 1.5e-45 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 608 - 660 | 1.8e-06 | Leucine rich repeat |
| LRR_4 | PF12799 | 608 - 646 | 2.1e-06 | Leucine Rich repeats (2 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 830 |
| Acc36I | ACCTGC | 1 cut(s) | 793 |
| Acc65I | GGTACC | 2 cut(s) | 781, 2320 |
| AccB1I | GGYRCC | 2 cut(s) | 781, 2320 |
| AccBSI | CCGCTC | 1 cut(s) | 1147 |
| AccII | CGCG | 1 cut(s) | 1151 |
| AccIII | TCCGGA | 2 cut(s) | 406, 1911 |
| AciI | CCGC | 8 cut(s) | 621, 1009, 1145, 1462, 1534, 1621, 2478, 2800 |
| AclWI | GGATC | 6 cut(s) | 631, 1125, 1208, 1345, 1421, 2709 |
| AcsI | RAATTY | 4 cut(s) | 755, 1655, 1837, 1944 |
| AcuI | CTGAAG | 3 cut(s) | 1407, 1662, 1993 |
| AfaI | GTAC | 7 cut(s) | 534, 783, 993, 1814, 1982, 2322, 2661 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1534, 2139, 2290, 2423 |
| AflIII | ACRYGT | 4 cut(s) | 270, 449, 1402, 1707 |
| AgeI | ACCGGT | 1 cut(s) | 1299 |
| AjiI | CACGTC | 2 cut(s) | 204, 1710 |
| AjnI | CCWGG | 3 cut(s) | 1936, 2132, 2750 |
| Alw21I | GWGCWC | 3 cut(s) | 531, 1455, 1618 |
| Alw26I | GTCTC | 4 cut(s) | 216, 607, 670, 2157 |
| AlwI | GGATC | 6 cut(s) | 631, 1125, 1208, 1345, 1421, 2709 |
| Aor13HI | TCCGGA | 2 cut(s) | 406, 1911 |
| AoxI | GGCC | 5 cut(s) | 186, 228, 651, 1138, 1502 |
| ApeKI | GCWGC | 4 cut(s) | 366, 1053, 1464, 1471 |
| ApoI | RAATTY | 4 cut(s) | 755, 1655, 1837, 1944 |
| AseI | ATTAAT | 1 cut(s) | 2442 |
| AsiGI | ACCGGT | 1 cut(s) | 1299 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 152, 2247, 2616, 2762 |
| Asp718I | GGTACC | 2 cut(s) | 781, 2320 |
| AspLEI | GCGC | 3 cut(s) | 1153, 1968, 2035 |
| AspS9I | GGNCC | 1 cut(s) | 2173 |
| AsuHPI | GGTGA | 5 cut(s) | 682, 998, 1059, 2262, 2563 |
| AsuII | TTCGAA | 2 cut(s) | 710, 2287 |
| AvaII | GGWCC | 1 cut(s) | 2173 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2312, 2345 |
| BanI | GGYRCC | 2 cut(s) | 781, 2320 |
| BanII | GRGCYC | 2 cut(s) | 531, 1455 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2379, 2411 |
| BauI | CACGAG | 3 cut(s) | 1154, 1990, 2108 |
| BbsI | GAAGAC | 6 cut(s) | 249, 495, 638, 735, 1170, 2609 |
| Bbv12I | GWGCWC | 3 cut(s) | 531, 1455, 1618 |
| BbvI | GCAGC | 4 cut(s) | 378, 1065, 1458, 1476 |
| BccI | CCATC | 8 cut(s) | 474, 556, 610, 766, 1099, 1248, 1580, 1977 |
| BceAI | ACGGC | 2 cut(s) | 676, 944 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 269, 303 |
| BciT130I | CCWGG | 3 cut(s) | 1938, 2134, 2752 |
| BciVI | GTATCC | 1 cut(s) | 877 |
| BclI | TGATCA | 1 cut(s) | 747 |
| BcoDI | GTCTC | 4 cut(s) | 216, 607, 670, 2157 |
| BfaI | CTAG | 6 cut(s) | 641, 1250, 1421, 1766, 2376, 2636 |
| BfmI | CTRYAG | 4 cut(s) | 606, 786, 808, 2264 |
| BfoI | RGCGCY | 1 cut(s) | 2036 |
| BfuAI | ACCTGC | 1 cut(s) | 793 |
| BfuI | GTATCC | 1 cut(s) | 877 |
| BisI | GCNGC | 6 cut(s) | 367, 1054, 1465, 1472, 1621, 2479 |
| BlsI | GCNGC | 6 cut(s) | 368, 1055, 1466, 1473, 1622, 2480 |
| Bme1390I | CCNGG | 3 cut(s) | 1938, 2134, 2752 |
| Bme18I | GGWCC | 1 cut(s) | 2173 |
| BmgBI | CACGTC | 2 cut(s) | 204, 1710 |
| BmgT120I | GGNCC | 1 cut(s) | 2173 |
| BmiI | GGNNCC | 3 cut(s) | 783, 2174, 2322 |
| BmrFI | CCNGG | 3 cut(s) | 1938, 2134, 2752 |
| BmrI | ACTGGG | 1 cut(s) | 2736 |
| BmsI | GCATC | 7 cut(s) | 95, 154, 460, 983, 1237, 1509, 2544 |
| BmuI | ACTGGG | 1 cut(s) | 2736 |
| BpiI | GAAGAC | 6 cut(s) | 249, 495, 638, 735, 1170, 2609 |
| BpmI | CTGGAG | 1 cut(s) | 2672 |
| Bpu14I | TTCGAA | 2 cut(s) | 710, 2287 |
| BpuEI | CTTGAG | 3 cut(s) | 370, 1121, 2402 |
| BsaJI | CCNNGG | 3 cut(s) | 648, 763, 2324 |
| BsaWI | WCCGGW | 3 cut(s) | 406, 1299, 1911 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1534, 2139, 2290, 2423 |
| Bse118I | RCCGGY | 2 cut(s) | 98, 1299 |
| Bse1I | ACTGG | 6 cut(s) | 1229, 1256, 1501, 1669, 2655, 2742 |
| Bse3DI | GCAATG | 2 cut(s) | 1733, 2603 |
| BseAI | TCCGGA | 2 cut(s) | 406, 1911 |
| BseBI | CCWGG | 3 cut(s) | 1938, 2134, 2752 |
| BseDI | CCNNGG | 3 cut(s) | 648, 763, 2324 |
| BseGI | GGATG | 6 cut(s) | 89, 621, 777, 877, 974, 1240 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1534, 2139, 2290, 2423 |
| BseMI | GCAATG | 2 cut(s) | 1733, 2603 |
| BseNI | ACTGG | 6 cut(s) | 1229, 1256, 1501, 1669, 2655, 2742 |
| BseRI | GAGGAG | 1 cut(s) | 2265 |
| BseXI | GCAGC | 4 cut(s) | 378, 1065, 1458, 1476 |
| BsgI | GTGCAG | 2 cut(s) | 506, 2572 |
| Bsh1236I | CGCG | 1 cut(s) | 1151 |
| BshFI | GGCC | 5 cut(s) | 188, 230, 653, 1140, 1504 |
| BshNI | GGYRCC | 2 cut(s) | 781, 2320 |
| BshTI | ACCGGT | 1 cut(s) | 1299 |
| BsiHKAI | GWGCWC | 3 cut(s) | 531, 1455, 1618 |
| BsiSI | CCGG | 4 cut(s) | 99, 407, 1300, 1912 |
| BsiWI | CGTACG | 1 cut(s) | 532 |
| BslFI | GGGAC | 5 cut(s) | 460, 1766, 2038, 2186, 2560 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1534, 2139, 2290, 2423 |
| BsmAI | GTCTC | 4 cut(s) | 216, 607, 670, 2157 |
| BsmBI | CGTCTC | 1 cut(s) | 2157 |
| BsmFI | GGGAC | 5 cut(s) | 460, 1766, 2038, 2186, 2560 |
| BsmI | GAATGC | 3 cut(s) | 154, 330, 1061 |
| BsnI | GGCC | 5 cut(s) | 188, 230, 653, 1140, 1504 |
| Bsp119I | TTCGAA | 2 cut(s) | 710, 2287 |
| Bsp1286I | GDGCHC | 3 cut(s) | 531, 1455, 1618 |
| Bsp13I | TCCGGA | 2 cut(s) | 406, 1911 |
| Bsp143I | GATC | 8 cut(s) | 583, 623, 747, 1117, 1200, 1350, 1413, 2701 |
| BspACI | CCGC | 8 cut(s) | 621, 1009, 1145, 1462, 1534, 1621, 2478, 2800 |
| BspANI | GGCC | 5 cut(s) | 188, 230, 653, 1140, 1504 |
| BspEI | TCCGGA | 2 cut(s) | 406, 1911 |
| BspFNI | CGCG | 1 cut(s) | 1151 |
| BspLI | GGNNCC | 3 cut(s) | 783, 2174, 2322 |
| BspMAI | CTGCAG | 2 cut(s) | 790, 2268 |
| BspMI | ACCTGC | 1 cut(s) | 793 |
| BspPI | GGATC | 6 cut(s) | 631, 1125, 1208, 1345, 1421, 2709 |
| BspQI | GCTCTTC | 2 cut(s) | 1256, 2253 |
| BspT104I | TTCGAA | 2 cut(s) | 710, 2287 |
| BspT107I | GGYRCC | 2 cut(s) | 781, 2320 |
| BsrBI | CCGCTC | 1 cut(s) | 1147 |
| BsrDI | GCAATG | 2 cut(s) | 1733, 2603 |
| BsrFI | RCCGGY | 2 cut(s) | 98, 1299 |
| BsrI | ACTGG | 6 cut(s) | 1229, 1256, 1501, 1669, 2655, 2742 |
| BssAI | RCCGGY | 2 cut(s) | 98, 1299 |
| BssECI | CCNNGG | 3 cut(s) | 648, 763, 2324 |
| BssMI | GATC | 8 cut(s) | 583, 623, 747, 1117, 1200, 1350, 1413, 2701 |
| BssSI | CACGAG | 3 cut(s) | 1154, 1990, 2108 |
| BssT1I | CCWWGG | 2 cut(s) | 648, 763 |
| Bst2BI | CACGAG | 3 cut(s) | 1154, 1990, 2108 |
| Bst2UI | CCWGG | 3 cut(s) | 1938, 2134, 2752 |
| Bst4CI | ACNGT | 5 cut(s) | 670, 706, 1325, 1985, 2328 |
| Bst6I | CTCTTC | 6 cut(s) | 668, 771, 921, 1256, 1585, 2253 |
| BstBI | TTCGAA | 2 cut(s) | 710, 2287 |
| BstC8I | GCNNGC | 8 cut(s) | 214, 475, 1149, 1469, 1542, 1618, 2037, 2230 |
| BstDEI | CTNAG | 2 cut(s) | 1277, 1826 |
| BstDSI | CCRYGG | 1 cut(s) | 2324 |
| BstF5I | GGATG | 6 cut(s) | 89, 621, 777, 877, 974, 1240 |
| BstFNI | CGCG | 1 cut(s) | 1151 |
| BstH2I | RGCGCY | 1 cut(s) | 2036 |
| BstHHI | GCGC | 3 cut(s) | 1153, 1968, 2035 |
| BstKTI | GATC | 8 cut(s) | 586, 626, 750, 1120, 1203, 1353, 1416, 2704 |
| BstMAI | GTCTC | 4 cut(s) | 216, 607, 670, 2157 |
| BstMBI | GATC | 8 cut(s) | 583, 623, 747, 1117, 1200, 1350, 1413, 2701 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 363, 1157 |
| BstNI | CCWGG | 3 cut(s) | 1938, 2134, 2752 |
| BstNSI | RCATGY | 7 cut(s) | 274, 453, 1406, 1471, 1478, 1515, 2053 |
| BstSCI | CCNGG | 3 cut(s) | 1936, 2132, 2750 |
| BstSFI | CTRYAG | 4 cut(s) | 606, 786, 808, 2264 |
| BstUI | CGCG | 1 cut(s) | 1151 |
| BstV1I | GCAGC | 4 cut(s) | 378, 1065, 1458, 1476 |
| BstV2I | GAAGAC | 6 cut(s) | 249, 495, 638, 735, 1170, 2609 |
| BstX2I | RGATCY | 1 cut(s) | 1117 |
| BstYI | RGATCY | 1 cut(s) | 1117 |
| BsuI | GTATCC | 1 cut(s) | 877 |
| BsuRI | GGCC | 5 cut(s) | 188, 230, 653, 1140, 1504 |
| BtgI | CCRYGG | 1 cut(s) | 2324 |
| BtgZI | GCGATG | 1 cut(s) | 2247 |
| BtrI | CACGTC | 2 cut(s) | 204, 1710 |
| BtsCI | GGATG | 6 cut(s) | 89, 621, 777, 877, 974, 1240 |
| BtsIMutI | CAGTG | 3 cut(s) | 1263, 1638, 1662 |
| BveI | ACCTGC | 1 cut(s) | 793 |
| Cac8I | GCNNGC | 8 cut(s) | 214, 475, 1149, 1469, 1542, 1618, 2037, 2230 |
| CfoI | GCGC | 3 cut(s) | 1153, 1968, 2035 |
| Cfr10I | RCCGGY | 2 cut(s) | 98, 1299 |
| Cfr13I | GGNCC | 1 cut(s) | 2173 |
| CseI | GACGC | 3 cut(s) | 205, 363, 2338 |
| Csp6I | GTAC | 7 cut(s) | 533, 782, 992, 1813, 1981, 2321, 2660 |
| CspAI | ACCGGT | 1 cut(s) | 1299 |
| CviQI | GTAC | 7 cut(s) | 533, 782, 992, 1813, 1981, 2321, 2660 |
| DdeI | CTNAG | 2 cut(s) | 1277, 1826 |
| DpnI | GATC | 8 cut(s) | 585, 625, 749, 1119, 1202, 1352, 1415, 2703 |
| DpnII | GATC | 8 cut(s) | 583, 623, 747, 1117, 1200, 1350, 1413, 2701 |
| Eam1104I | CTCTTC | 6 cut(s) | 668, 771, 921, 1256, 1585, 2253 |
| EarI | CTCTTC | 6 cut(s) | 668, 771, 921, 1256, 1585, 2253 |
| EciI | GGCGGA | 1 cut(s) | 636 |
| Ecl136II | GAGCTC | 2 cut(s) | 529, 1453 |
| Eco130I | CCWWGG | 2 cut(s) | 648, 763 |
| Eco147I | AGGCCT | 2 cut(s) | 653, 1140 |
| Eco24I | GRGCYC | 2 cut(s) | 531, 1455 |
| Eco32I | GATATC | 2 cut(s) | 912, 1909 |
| Eco47I | GGWCC | 1 cut(s) | 2173 |
| Eco53kI | GAGCTC | 2 cut(s) | 529, 1453 |
| Eco57I | CTGAAG | 3 cut(s) | 1407, 1662, 1993 |
| EcoICRI | GAGCTC | 2 cut(s) | 529, 1453 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2173 |
| EcoRI | GAATTC | 1 cut(s) | 755 |
| EcoRII | CCWGG | 3 cut(s) | 1936, 2132, 2750 |
| EcoRV | GATATC | 2 cut(s) | 912, 1909 |
| EcoT14I | CCWWGG | 2 cut(s) | 648, 763 |
| EcoT22I | ATGCAT | 3 cut(s) | 1524, 2051, 2449 |
| EcoT38I | GRGCYC | 2 cut(s) | 531, 1455 |
| ErhI | CCWWGG | 2 cut(s) | 648, 763 |
| Esp3I | CGTCTC | 1 cut(s) | 2157 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2232, 2264 |
| FaqI | GGGAC | 5 cut(s) | 460, 1766, 2038, 2186, 2560 |
| FauI | CCCGC | 1 cut(s) | 1527 |
| FauNDI | CATATG | 3 cut(s) | 718, 2045, 2449 |
| FbaI | TGATCA | 1 cut(s) | 747 |
| Fnu4HI | GCNGC | 6 cut(s) | 367, 1054, 1465, 1472, 1621, 2479 |
| FokI | GGATG | 6 cut(s) | 76, 628, 784, 884, 961, 1227 |
| FriOI | GRGCYC | 2 cut(s) | 531, 1455 |
| Fsp4HI | GCNGC | 6 cut(s) | 367, 1054, 1465, 1472, 1621, 2479 |
| FspBI | CTAG | 6 cut(s) | 641, 1250, 1421, 1766, 2376, 2636 |
| GlaI | GCGC | 3 cut(s) | 1152, 1967, 2034 |
| GluI | GCNGC | 6 cut(s) | 367, 1054, 1465, 1472, 1621, 2479 |
| GsuI | CTGGAG | 1 cut(s) | 2672 |
| HaeII | RGCGCY | 1 cut(s) | 2036 |
| HaeIII | GGCC | 5 cut(s) | 188, 230, 653, 1140, 1504 |
| HapII | CCGG | 4 cut(s) | 99, 407, 1300, 1912 |
| HgaI | GACGC | 3 cut(s) | 205, 363, 2338 |
| HhaI | GCGC | 3 cut(s) | 1153, 1968, 2035 |
| Hin6I | GCGC | 3 cut(s) | 1151, 1966, 2033 |
| HinP1I | GCGC | 3 cut(s) | 1151, 1966, 2033 |
| HincII | GTYRAC | 1 cut(s) | 1629 |
| HindII | GTYRAC | 1 cut(s) | 1629 |
| HindIII | AAGCTT | 2 cut(s) | 742, 2489 |
| HpaII | CCGG | 4 cut(s) | 99, 407, 1300, 1912 |
| HphI | GGTGA | 5 cut(s) | 682, 998, 1059, 2262, 2563 |
| Hpy166II | GTNNAC | 3 cut(s) | 1210, 1629, 1813 |
| Hpy8I | GTNNAC | 3 cut(s) | 1210, 1629, 1813 |
| Hpy99I | CGWCG | 1 cut(s) | 205 |
| HpyCH4III | ACNGT | 5 cut(s) | 670, 706, 1325, 1985, 2328 |
| HpyCH4IV | ACGT | 3 cut(s) | 203, 1709, 2016 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 363, 1157 |
| HpyF3I | CTNAG | 2 cut(s) | 1277, 1826 |
| HpySE526I | ACGT | 3 cut(s) | 203, 1709, 2016 |
| HspAI | GCGC | 3 cut(s) | 1151, 1966, 2033 |
| Kpn2I | TCCGGA | 2 cut(s) | 406, 1911 |
| KpnI | GGTACC | 2 cut(s) | 785, 2324 |
| Ksp22I | TGATCA | 1 cut(s) | 747 |
| Kzo9I | GATC | 8 cut(s) | 583, 623, 747, 1117, 1200, 1350, 1413, 2701 |
| LguI | GCTCTTC | 2 cut(s) | 1256, 2253 |
| LmnI | GCTCC | 9 cut(s) | 133, 1042, 1450, 1537, 1869, 1890, 2208, 2346, 2653 |
| Lsp1109I | GCAGC | 4 cut(s) | 378, 1065, 1458, 1476 |
| LweI | GCATC | 7 cut(s) | 95, 154, 460, 983, 1237, 1509, 2544 |
| MaeI | CTAG | 6 cut(s) | 641, 1250, 1421, 1766, 2376, 2636 |
| MaeII | ACGT | 3 cut(s) | 203, 1709, 2016 |
| MaeIII | GTNAC | 6 cut(s) | 64, 1671, 1699, 1985, 2268, 2350 |
| MalI | GATC | 8 cut(s) | 585, 625, 749, 1119, 1202, 1352, 1415, 2703 |
| MbiI | CCGCTC | 1 cut(s) | 1147 |
| MboI | GATC | 8 cut(s) | 583, 623, 747, 1117, 1200, 1350, 1413, 2701 |
| MfeI | CAATTG | 3 cut(s) | 685, 1785, 2504 |
| MflI | RGATCY | 1 cut(s) | 1117 |
| MhlI | GDGCHC | 3 cut(s) | 531, 1455, 1618 |
| MlyI | GAGTC | 5 cut(s) | 509, 854, 1112, 2100, 2116 |
| MmeI | TCCRAC | 1 cut(s) | 849 |
| Mph1103I | ATGCAT | 3 cut(s) | 1524, 2051, 2449 |
| MroI | TCCGGA | 2 cut(s) | 406, 1911 |
| MroXI | GAANNNNTTC | 4 cut(s) | 152, 2247, 2616, 2762 |
| MslI | CAYNNNNRTG | 6 cut(s) | 273, 863, 1195, 1667, 2048, 2357 |
| MspI | CCGG | 4 cut(s) | 99, 407, 1300, 1912 |
| MspR9I | CCNGG | 3 cut(s) | 1938, 2134, 2752 |
| MunI | CAATTG | 3 cut(s) | 685, 1785, 2504 |
| Mva1269I | GAATGC | 3 cut(s) | 154, 330, 1061 |
| MvaI | CCWGG | 3 cut(s) | 1938, 2134, 2752 |
| MvnI | CGCG | 1 cut(s) | 1151 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 363, 1157 |
| NdeI | CATATG | 3 cut(s) | 718, 2045, 2449 |
| NdeII | GATC | 8 cut(s) | 583, 623, 747, 1117, 1200, 1350, 1413, 2701 |
| NlaIV | GGNNCC | 3 cut(s) | 783, 2174, 2322 |
| NmuCI | GTSAC | 4 cut(s) | 64, 1671, 2268, 2350 |
| NsiI | ATGCAT | 3 cut(s) | 1524, 2051, 2449 |
| NspI | RCATGY | 7 cut(s) | 274, 453, 1406, 1471, 1478, 1515, 2053 |
| NspV | TTCGAA | 2 cut(s) | 710, 2287 |
| PaeI | GCATGC | 1 cut(s) | 1471 |
| PceI | AGGCCT | 2 cut(s) | 653, 1140 |
| PciI | ACATGT | 3 cut(s) | 270, 449, 1402 |
| PciSI | GCTCTTC | 2 cut(s) | 1256, 2253 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 295 |
| PctI | GAATGC | 3 cut(s) | 154, 330, 1061 |
| PdmI | GAANNNNTTC | 4 cut(s) | 152, 2247, 2616, 2762 |
| PfeI | GAWTC | 6 cut(s) | 11, 415, 490, 1746, 1871, 2678 |
| Pfl23II | CGTACG | 1 cut(s) | 532 |
| PinAI | ACCGGT | 1 cut(s) | 1299 |
| PkrI | GCNGC | 6 cut(s) | 368, 1055, 1466, 1473, 1622, 2480 |
| PleI | GAGTC | 5 cut(s) | 508, 853, 1111, 2100, 2116 |
| PpsI | GAGTC | 5 cut(s) | 508, 853, 1111, 2100, 2116 |
| PpuMI | RGGWCCY | 1 cut(s) | 2173 |
| PscI | ACATGT | 3 cut(s) | 270, 449, 1402 |
| PshBI | ATTAAT | 1 cut(s) | 2442 |
| PsiI | TTATAA | 1 cut(s) | 830 |
| Psp124BI | GAGCTC | 2 cut(s) | 531, 1455 |
| Psp5II | RGGWCCY | 1 cut(s) | 2173 |
| Psp6I | CCWGG | 3 cut(s) | 1936, 2132, 2750 |
| PspGI | CCWGG | 3 cut(s) | 1936, 2132, 2750 |
| PspLI | CGTACG | 1 cut(s) | 532 |
| PspN4I | GGNNCC | 3 cut(s) | 783, 2174, 2322 |
| PspPI | GGNCC | 1 cut(s) | 2173 |
| PspPPI | RGGWCCY | 1 cut(s) | 2173 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 87, 119 |
| PstI | CTGCAG | 2 cut(s) | 790, 2268 |
| PsuI | RGATCY | 1 cut(s) | 1117 |
| RsaI | GTAC | 7 cut(s) | 534, 783, 993, 1814, 1982, 2322, 2661 |
| RsaNI | GTAC | 7 cut(s) | 533, 782, 992, 1813, 1981, 2321, 2660 |
| RseI | CAYNNNNRTG | 6 cut(s) | 273, 863, 1195, 1667, 2048, 2357 |
| SacI | GAGCTC | 2 cut(s) | 531, 1455 |
| SapI | GCTCTTC | 2 cut(s) | 1256, 2253 |
| SatI | GCNGC | 6 cut(s) | 367, 1054, 1465, 1472, 1621, 2479 |
| Sau3AI | GATC | 8 cut(s) | 583, 623, 747, 1117, 1200, 1350, 1413, 2701 |
| Sau96I | GGNCC | 1 cut(s) | 2173 |
| SchI | GAGTC | 5 cut(s) | 509, 854, 1112, 2100, 2116 |
| ScrFI | CCNGG | 3 cut(s) | 1938, 2134, 2752 |
| SduI | GDGCHC | 3 cut(s) | 531, 1455, 1618 |
| SfaNI | GCATC | 7 cut(s) | 95, 154, 460, 983, 1237, 1509, 2544 |
| SfcI | CTRYAG | 4 cut(s) | 606, 786, 808, 2264 |
| SfuI | TTCGAA | 2 cut(s) | 710, 2287 |
| SinI | GGWCC | 1 cut(s) | 2173 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 273, 863, 1195, 1667, 2048, 2357 |
| SmlI | CTYRAG | 3 cut(s) | 385, 1100, 2381 |
| SmoI | CTYRAG | 3 cut(s) | 385, 1100, 2381 |
| SphI | GCATGC | 1 cut(s) | 1471 |
| SseBI | AGGCCT | 2 cut(s) | 653, 1140 |
| SsiI | CCGC | 8 cut(s) | 621, 1009, 1145, 1462, 1534, 1621, 2478, 2800 |
| SspMI | CTAG | 6 cut(s) | 641, 1250, 1421, 1766, 2376, 2636 |
| SstI | GAGCTC | 2 cut(s) | 531, 1455 |
| StuI | AGGCCT | 2 cut(s) | 653, 1140 |
| StyD4I | CCNGG | 3 cut(s) | 1936, 2132, 2750 |
| StyI | CCWWGG | 2 cut(s) | 648, 763 |
| TaaI | ACNGT | 5 cut(s) | 670, 706, 1325, 1985, 2328 |
| TaiI | ACGT | 3 cut(s) | 206, 1712, 2019 |
| TaqI | TCGA | 7 cut(s) | 298, 493, 710, 940, 958, 1612, 2287 |
| TaqII | GACCGA | 2 cut(s) | 186, 1671 |
| TatI | WGTACW | 2 cut(s) | 991, 1812 |
| TauI | GCSGC | 2 cut(s) | 1623, 2481 |
| TfiI | GAWTC | 6 cut(s) | 11, 415, 490, 1746, 1871, 2678 |
| TscAI | CASTG | 3 cut(s) | 1263, 1645, 1669 |
| TseFI | GTSAC | 4 cut(s) | 64, 1671, 2268, 2350 |
| TseI | GCWGC | 4 cut(s) | 366, 1053, 1464, 1471 |
| Tsp45I | GTSAC | 4 cut(s) | 64, 1671, 2268, 2350 |
| TspDTI | ATGAA | 9 cut(s) | 126, 161, 250, 590, 594, 1179, 1506, 2213, 2250 |
| TspGWI | ACGGA | 2 cut(s) | 82, 550 |
| TspRI | CASTG | 3 cut(s) | 1263, 1645, 1669 |
| VpaK11BI | GGWCC | 1 cut(s) | 2173 |
| VspI | ATTAAT | 1 cut(s) | 2442 |
| XapI | RAATTY | 4 cut(s) | 755, 1655, 1837, 1944 |
| XbaI | TCTAGA | 2 cut(s) | 1765, 2375 |
| XceI | RCATGY | 7 cut(s) | 274, 453, 1406, 1471, 1478, 1515, 2053 |
| XmnI | GAANNNNTTC | 4 cut(s) | 152, 2247, 2616, 2762 |
| XspI | CTAG | 6 cut(s) | 641, 1250, 1421, 1766, 2376, 2636 |
| Zsp2I | ATGCAT | 3 cut(s) | 1524, 2051, 2449 |