Prupe.8G009000_v2.0.a1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000110
Physical Location & Seq
Reverse (-)
661490 .. 665104
3615 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G009000.1

Sequence Viewer

Length: 2754 bp
ATGGCCTTGCCGACAAACATCTTGATTGGCAAAATTGTGACCATTTTTGAGAACGAAGCATCCTCCATAGCCGGTGTTCGTGATGAAATTGATGACATCAAGCAGGAGCTTGTAAGCATGACGGCCTTCCTCAATGATACTGAGGGCAAGAATGTACGCAGCGAAGGTGGGAGGACGTGGGTTGCAAGCGTCAGAGGCATGGCCTATGATGTTGAAGACATCATTGACGAGTTCATGTATCACATGTATAAGCGAGGATGTCATGATGGTCGATTTGCAAGGTGGTTCCACCAAACTATTCGCATTCCACAGAATGTTTGGTTCAGACGTCAAATGTCAAAGAAGTTGCGGAAAATCTCAATAATGATTAAAGCCATTCCGGATAGGAATCAGAGATATGGTGTCGGTGGATTAGAAGGAACAAGTAGTGCTTGTGATGATGTTAGCAAATTGATGCGGAACCAAGCGGAATCTTCTCTTTTTATTAAGGAAGATGAGCTCGTGGGGATTGAAAGAAAGAAGCAACTATTGATCAATTGGTTGATGAATGGAGAGCAACAGCAAACGCTTCTCTCTGTGGTGGGGATGGGCGGATCAGGGAAGACGACTTTAGTTGCAAAGACCTTCAACGACGAAAGGGTCAAGAAACAATTCCACTGTTGTGCTTGGGTAACTATTTCACAAACTTATGTGATTGACGACTTGTTTAGAAGCTTGATTAAGGAATTCCACGAAGCAAACAAGGAAAAGATCCCTGCAGACATGAATTCCATGACATATAGAGAATTGCTACAGGTGCTGGTCAATTACTTGGAGTCTAAAAGGTACATGGTTGTATTGGATGATGTGTGGGATATTAAACTTTGGAAAGAAATTAGGATAGCACTCCCAAATACACAGCTTGGAAGTCGAATCATGTTAACTACTCGAAAAGAAGACGTAGCATCCTCTTCTTTTGGAGCACAAAGTCATATTCACCACATTCAACTCCTCGAAATGAATGATGCTTGGGAGCTATTCAGCAGCAAAGCATTCTCAGCTTACCAGAATAACTGTTGTCCACCAGAACTTCAATCATTGGCTGAGGAAGTTGTAGAAAAGTGTGAAGGCCTACCTCTGGCAATCGTGGCTTTAGCTGGTCTGATGTCCTCCAAGAAGCCATTCGAGTGGAAGCAAGTCTACAACTGCTTAAACTTGCATTTAACTATCCCGTTGTTAGAGCGAGTGGAGAACATCTTATTTCTTAGTTTTGATGATTTACCATACCCATTGAAGCACTGTTTTCTATACTGTTCCCTTTTCCCAGAAGACTATTTGATTCGAAGAAAGAGGCTCATTAGGATGTGGATAGCTGAAGGGTTTATTCAAGATGAAAAAGGCGCCACACCAGAAGAAGTTGCTGAGAGCTATCTTATGCAGCTCATTTTCCGTAGCATGCTACATGTTGTTCAGAGGAATGAAAGTGGAAGGCCAAAAGCATGTAAGATGCACGACCTTATGCGGAAGCTTGCTCTGTCTAAATCAGAAAAAGAAAAGTTCGGTGCTGTATATGATGGAAAAGAAGTTATGGAAGAAGTTCAAGTGCGCCGCTTGTCAACTCAAACCACTGGAGGAGGAGAAATTAAACTAGGCACTGGTGTGGCACAACTTCGTTCTTTTCTTGTGTTTGTTACTGACGTGTCCTCATCCTCTTCCTCGAATACATTGCCTTCTGGATGCAAATTGTTGAGGGTGCTAGATTTGCAATATGTTCCAATTGATATACTGCCAAAAGAACTTGAGTACTTATTCAATTTAAGATACTTAAATTTAAGGGGAACTCCAGTTAAGAAGCTTCCTGAATCCATTGGAAAGCTCAGCAACCTTCAAACTTTGGATATCAGGGACTCAAAGATAGAGGTACTTCCAAGTGGAATTGCCAAGTTGCAAAACCTGCGCCATCTAATTATGTATCGTCGCACTGAAGAGCATAGGGGCTTCAGATATCTGAATGGGACAAGATCACCATCAAATATATGTATGTTGAAGAAATTGCAAGTTTTGGCGTGTGTTGAATTAGAAGGAAACATTGTTAAACTTGTGGGGAATATGACCCAACTTAGAAGGATTGGAATTTCAAATGTAAAAGAAAGAGACGAGATGGACCTATGTGCCTCAATTCAAAAGATGAAGCTCCTTCACCAGTTGGTTCTGAAGACAAGCGATGAAGAGGAAGTTCTTCAAACAAACGCACTATGCTCACCTCCTCCCCACCTTCAAACTCTTGTTTTGGTTGGCAAATTGGAAATTGTGCCACGTTGGTTCTTTTCACTCCAGAGCCTCATACAATTGCAACTGCATTGGTCTAGAATTGAAGAAGATTTGCTACCTTACATTGAAGCACTACCCAATCTGGGATATCTTGTACTTATTAATGGATATGCTGGCAGAGAGTTATGTTTCAGCAGAGGCTTTGTAAAGCTTACGAGATTGGAATTGTGTACTTGCCCCTTATTGAACAAGGTAACTATAGAAAAAGGGGTGATGTCAAATCTCCAATCCTTAAGGATTGATAACTGCCCAGAACTAAGCACAACGCCACAGGGTCTTCAATACCTCACTAAACTAAAAGAAATGTCATTGGTGGTTGTACCAAAGGAACTTAAGGATTCCATACGAGAAGGAGGTGTGGATCGTGAAAAGGTACAACACATCCCTGAGATCTACCATATTTACAAAACGTCACTGGGGATGTGTCGTGAAAGCTTGTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

918

Amino Acids

104.95

Weight (kDa)

8.45

Isoelectric Point (pI)

52.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 638
AatII GACGTC 1 cut(s) 331
Acc36I ACCTGC 1 cut(s) 1941
AccB1I GGYRCC 1 cut(s) 1379
AccI GTMKAC 1 cut(s) 1179
AccIII TCCGGA 1 cut(s) 379
AciI CCGC 6 cut(s) 349, 457, 467, 591, 1501, 1588
AclWI GGATC 3 cut(s) 601, 745, 2679
AcsI RAATTY 4 cut(s) 725, 766, 1807, 2112
AcuI CTGAAG 4 cut(s) 1374, 1963, 1983, 2213
AcyI GRCGYC 2 cut(s) 328, 1380
AfaI GTAC 8 cut(s) 156, 827, 1784, 1902, 2406, 2482, 2631, 2685
AfiI CCNNNNNNNGG 2 cut(s) 1117, 2393
AflII CTTAAG 2 cut(s) 2542, 2642
AflIII ACRYGT 3 cut(s) 243, 1441, 1677
AjiI CACGTC 2 cut(s) 177, 1678
AjuI GAANNNNNNNTTGG 2 cut(s) 1145, 1177
AleI CACNNNNGTG 2 cut(s) 660, 1637
AloI GAACNNNNNNTCC 2 cut(s) 44, 76
Alw21I GWGCWC 2 cut(s) 501, 964
Alw26I GTCTC 1 cut(s) 2127
AlwI GGATC 3 cut(s) 601, 745, 2679
AlwNI CAGNNNCTG 1 cut(s) 799
Aor13HI TCCGGA 1 cut(s) 379
AoxI GGCC 5 cut(s) 3, 123, 201, 1108, 1469
ApeKI GCWGC 3 cut(s) 159, 1023, 1417
ApoI RAATTY 4 cut(s) 725, 766, 1807, 2112
AseI ATTAAT 1 cut(s) 2412
Asp700I GAANNNNTTC 4 cut(s) 650, 1160, 1575, 2217
AspLEI GCGC 3 cut(s) 1382, 1587, 1938
AspS9I GGNCC 1 cut(s) 2143
AsuHPI GGTGA 5 cut(s) 968, 1995, 2171, 2232, 2533
AsuII TTCGAA 1 cut(s) 1321
AvaII GGWCC 1 cut(s) 2143
BanI GGYRCC 1 cut(s) 1379
BanII GRGCYC 1 cut(s) 501
BarI GAAGNNNNNNTAC 4 cut(s) 1163, 1195, 2349, 2381
BauI CACGAG 1 cut(s) 500
BbsI GAAGAC 6 cut(s) 222, 608, 942, 1314, 2201, 2579
Bbv12I GWGCWC 2 cut(s) 501, 964
BbvCI CCTCAGC 1 cut(s) 1083
BbvI GCAGC 3 cut(s) 171, 1035, 1429
BccI CCATC 6 cut(s) 260, 580, 1547, 1947, 2014, 2134
BceAI ACGGC 1 cut(s) 138
BcgI CGANNNNNNTGC 2 cut(s) 1687, 1721
BclI TGATCA 1 cut(s) 531
BcoDI GTCTC 1 cut(s) 2127
BfaI CTAG 4 cut(s) 1628, 1736, 2346, 2752
BfmI CTRYAG 3 cut(s) 756, 791, 2508
BfoI RGCGCY 1 cut(s) 1383
BfrI CTTAAG 2 cut(s) 2542, 2642
BfuAI ACCTGC 1 cut(s) 1941
BglII AGATCT 1 cut(s) 2700
BisI GCNGC 4 cut(s) 160, 1024, 1418, 1588
BlpI GCTNAGC 1 cut(s) 1856
BlsI GCNGC 4 cut(s) 161, 1025, 1419, 1589
BmcAI AGTACT 1 cut(s) 1784
Bme18I GGWCC 1 cut(s) 2143
BmgBI CACGTC 2 cut(s) 177, 1678
BmgT120I GGNCC 1 cut(s) 2143
BmiI GGNNCC 3 cut(s) 287, 461, 1381
BmrI ACTGGG 1 cut(s) 2735
BmsI GCATC 6 cut(s) 68, 444, 953, 994, 1476, 1706
BmuI ACTGGG 1 cut(s) 2735
BpiI GAAGAC 6 cut(s) 222, 608, 942, 1314, 2201, 2579
BpmI CTGGAG 3 cut(s) 1629, 1806, 2297
Bpu10I CCTNAGC 1 cut(s) 1083
Bpu1102I GCTNAGC 1 cut(s) 1856
Bpu14I TTCGAA 1 cut(s) 1321
BpuEI CTTGAG 1 cut(s) 1799
BsaBI GATNNNNATC 2 cut(s) 387, 2005
BsaHI GRCGYC 2 cut(s) 328, 1380
BsaWI WCCGGW 1 cut(s) 379
Bsc4I CCNNNNNNNGG 2 cut(s) 1117, 2393
Bse118I RCCGGY 1 cut(s) 71
Bse1I ACTGG 5 cut(s) 1612, 1639, 1823, 2182, 2730
Bse3DI GCAATG 1 cut(s) 1703
Bse8I GATNNNNATC 2 cut(s) 387, 2005
BseAI TCCGGA 1 cut(s) 379
BseJI GATNNNNATC 2 cut(s) 387, 2005
BseLI CCNNNNNNNGG 2 cut(s) 1117, 2393
BseMI GCAATG 1 cut(s) 1703
BseMII CTCAG 6 cut(s) 132, 1050, 1074, 1392, 1870, 2688
BseNI ACTGG 5 cut(s) 1612, 1639, 1823, 2182, 2730
BseRI GAGGAG 4 cut(s) 980, 1626, 1629, 2235
BseXI GCAGC 3 cut(s) 171, 1035, 1429
BshFI GGCC 5 cut(s) 5, 125, 203, 1110, 1471
BshNI GGYRCC 1 cut(s) 1379
BsiHKAI GWGCWC 2 cut(s) 501, 964
BsiSI CCGG 2 cut(s) 72, 380
BslFI GGGAC 2 cut(s) 1898, 2008
BslI CCNNNNNNNGG 2 cut(s) 1117, 2393
BsmAI GTCTC 1 cut(s) 2127
BsmBI CGTCTC 1 cut(s) 2127
BsmFI GGGAC 2 cut(s) 1898, 2008
BsmI GAATGC 2 cut(s) 303, 1031
BsnI GGCC 5 cut(s) 5, 125, 203, 1110, 1471
Bsp119I TTCGAA 1 cut(s) 1321
Bsp1286I GDGCHC 2 cut(s) 501, 964
Bsp13I TCCGGA 1 cut(s) 379
Bsp143I GATC 6 cut(s) 531, 593, 750, 2000, 2671, 2700
Bsp1720I GCTNAGC 1 cut(s) 1856
BspACI CCGC 6 cut(s) 349, 457, 467, 591, 1501, 1588
BspANI GGCC 5 cut(s) 5, 125, 203, 1110, 1471
BspCNI CTCAG 6 cut(s) 133, 1049, 1075, 1393, 1869, 2689
BspEI TCCGGA 1 cut(s) 379
BspHI TCATGA 1 cut(s) 262
BspLI GGNNCC 3 cut(s) 287, 461, 1381
BspMAI CTGCAG 1 cut(s) 760
BspMI ACCTGC 1 cut(s) 1941
BspPI GGATC 3 cut(s) 601, 745, 2679
BspQI GCTCTTC 1 cut(s) 1959
BspT104I TTCGAA 1 cut(s) 1321
BspT107I GGYRCC 1 cut(s) 1379
BspTI CTTAAG 2 cut(s) 2542, 2642
BsrDI GCAATG 1 cut(s) 1703
BsrFI RCCGGY 1 cut(s) 71
BsrI ACTGG 5 cut(s) 1612, 1639, 1823, 2182, 2730
BssAI RCCGGY 1 cut(s) 71
BssMI GATC 6 cut(s) 531, 593, 750, 2000, 2671, 2700
BssNI GRCGYC 2 cut(s) 328, 1380
BssSI CACGAG 1 cut(s) 500
Bst2BI CACGAG 1 cut(s) 500
Bst4CI ACNGT 4 cut(s) 659, 1055, 1280, 1292
Bst6I CTCTTC 4 cut(s) 955, 1696, 1959, 2202
BstACI GRCGYC 2 cut(s) 328, 1380
BstAFI CTTAAG 2 cut(s) 2542, 2642
BstAPI GCANNNNNTGC 1 cut(s) 1933
BstBI TTCGAA 1 cut(s) 1321
BstC8I GCNNGC 4 cut(s) 187, 1436, 1509, 2425
BstDEI CTNAG 9 cut(s) 141, 1036, 1083, 1244, 1401, 1856, 2099, 2567, 2697
BstH2I RGCGCY 1 cut(s) 1383
BstHHI GCGC 3 cut(s) 1382, 1587, 1938
BstKTI GATC 6 cut(s) 534, 596, 753, 2003, 2674, 2703
BstMAI GTCTC 1 cut(s) 2127
BstMBI GATC 6 cut(s) 531, 593, 750, 2000, 2671, 2700
BstMWI GCNNNNNNNGC 6 cut(s) 195, 796, 1037, 1127, 1741, 1933
BstNSI RCATGY 4 cut(s) 247, 1438, 1445, 1482
BstSFI CTRYAG 3 cut(s) 756, 791, 2508
BstV1I GCAGC 3 cut(s) 171, 1035, 1429
BstV2I GAAGAC 6 cut(s) 222, 608, 942, 1314, 2201, 2579
BstX2I RGATCY 2 cut(s) 750, 2700
BstXI CCANNNNNNTGG 1 cut(s) 1167
BstYI RGATCY 2 cut(s) 750, 2700
BsuRI GGCC 5 cut(s) 5, 125, 203, 1110, 1471
BtgZI GCGATG 1 cut(s) 2217
BtrI CACGTC 2 cut(s) 177, 1678
BtsIMutI CAGTG 6 cut(s) 655, 1276, 1605, 1632, 1959, 2723
BveI ACCTGC 1 cut(s) 1941
Cac8I GCNNGC 4 cut(s) 187, 1436, 1509, 2425
CaiI CAGNNNCTG 1 cut(s) 799
CciI TCATGA 1 cut(s) 262
CfoI GCGC 3 cut(s) 1382, 1587, 1938
Cfr10I RCCGGY 1 cut(s) 71
Cfr13I GGNCC 1 cut(s) 2143
CseI GACGC 1 cut(s) 178
Csp6I GTAC 8 cut(s) 155, 826, 1783, 1901, 2405, 2481, 2630, 2684
CviQI GTAC 8 cut(s) 155, 826, 1783, 1901, 2405, 2481, 2630, 2684
DdeI CTNAG 9 cut(s) 141, 1036, 1083, 1244, 1401, 1856, 2099, 2567, 2697
DinI GGCGCC 1 cut(s) 1381
DpnI GATC 6 cut(s) 533, 595, 752, 2002, 2673, 2702
DpnII GATC 6 cut(s) 531, 593, 750, 2000, 2671, 2700
DrdI GACNNNNNNGTC 1 cut(s) 638
DseDI GACNNNNNNGTC 1 cut(s) 638
Eam1104I CTCTTC 4 cut(s) 955, 1696, 1959, 2202
EarI CTCTTC 4 cut(s) 955, 1696, 1959, 2202
EciI GGCGGA 1 cut(s) 606
Ecl136II GAGCTC 1 cut(s) 499
Eco147I AGGCCT 1 cut(s) 1110
Eco24I GRGCYC 1 cut(s) 501
Eco32I GATATC 3 cut(s) 1879, 1985, 2399
Eco47I GGWCC 1 cut(s) 2143
Eco53kI GAGCTC 1 cut(s) 499
Eco57I CTGAAG 4 cut(s) 1374, 1963, 1983, 2213
EcoICRI GAGCTC 1 cut(s) 499
EcoRI GAATTC 2 cut(s) 725, 766
EcoRV GATATC 3 cut(s) 1879, 1985, 2399
EcoT38I GRGCYC 1 cut(s) 501
EgeI GGCGCC 1 cut(s) 1381
EheI GGCGCC 1 cut(s) 1381
Esp3I CGTCTC 1 cut(s) 2127
FalI AAGNNNNNCTT 2 cut(s) 415, 447
FaqI GGGAC 2 cut(s) 1898, 2008
FbaI TGATCA 1 cut(s) 531
FblI GTMKAC 1 cut(s) 1179
Fnu4HI GCNGC 4 cut(s) 160, 1024, 1418, 1588
FriOI GRGCYC 1 cut(s) 501
Fsp4HI GCNGC 4 cut(s) 160, 1024, 1418, 1588
FspBI CTAG 4 cut(s) 1628, 1736, 2346, 2752
GlaI GCGC 3 cut(s) 1381, 1586, 1937
GluI GCNGC 4 cut(s) 160, 1024, 1418, 1588
GsuI CTGGAG 3 cut(s) 1629, 1806, 2297
HaeII RGCGCY 1 cut(s) 1383
HaeIII GGCC 5 cut(s) 5, 125, 203, 1110, 1471
HapII CCGG 2 cut(s) 72, 380
HgaI GACGC 1 cut(s) 178
HhaI GCGC 3 cut(s) 1382, 1587, 1938
Hin1I GRCGYC 2 cut(s) 328, 1380
Hin6I GCGC 3 cut(s) 1380, 1585, 1936
HinP1I GCGC 3 cut(s) 1380, 1585, 1936
HincII GTYRAC 2 cut(s) 921, 1596
HindII GTYRAC 2 cut(s) 921, 1596
HindIII AAGCTT 5 cut(s) 712, 1505, 1832, 2459, 2743
HinfI GANTC 8 cut(s) 388, 470, 815, 912, 1318, 1841, 1886, 2648
HpaI GTTAAC 1 cut(s) 921
HpaII CCGG 2 cut(s) 72, 380
HphI GGTGA 5 cut(s) 968, 1995, 2171, 2232, 2533
Hpy166II GTNNAC 5 cut(s) 921, 1061, 1180, 1596, 2481
Hpy188I TCNGA 9 cut(s) 194, 326, 393, 1143, 1452, 1525, 1982, 1989, 2193
Hpy8I GTNNAC 5 cut(s) 921, 1061, 1180, 1596, 2481
Hpy99I CGWCG 2 cut(s) 635, 1959
HpyCH4III ACNGT 4 cut(s) 659, 1055, 1280, 1292
HpyCH4IV ACGT 6 cut(s) 176, 328, 939, 1677, 2296, 2720
HpyF10VI GCNNNNNNNGC 6 cut(s) 195, 796, 1037, 1127, 1741, 1933
HpyF3I CTNAG 9 cut(s) 141, 1036, 1083, 1244, 1401, 1856, 2099, 2567, 2697
HpySE526I ACGT 6 cut(s) 176, 328, 939, 1677, 2296, 2720
Hsp92I GRCGYC 2 cut(s) 328, 1380
HspAI GCGC 3 cut(s) 1380, 1585, 1936
KasI GGCGCC 1 cut(s) 1379
Kpn2I TCCGGA 1 cut(s) 379
Ksp22I TGATCA 1 cut(s) 531
KspAI GTTAAC 1 cut(s) 921
Kzo9I GATC 6 cut(s) 531, 593, 750, 2000, 2671, 2700
LguI GCTCTTC 1 cut(s) 1959
LmnI GCTCC 4 cut(s) 106, 959, 1012, 2178
Lsp1109I GCAGC 3 cut(s) 171, 1035, 1429
LweI GCATC 6 cut(s) 68, 444, 953, 994, 1476, 1706
MaeI CTAG 4 cut(s) 1628, 1736, 2346, 2752
MaeII ACGT 6 cut(s) 176, 328, 939, 1677, 2296, 2720
MaeIII GTNAC 5 cut(s) 37, 670, 1669, 2503, 2721
MalI GATC 6 cut(s) 533, 595, 752, 2002, 2673, 2702
MboI GATC 6 cut(s) 531, 593, 750, 2000, 2671, 2700
MfeI CAATTG 3 cut(s) 535, 1755, 2327
MflI RGATCY 2 cut(s) 750, 2700
MhlI GDGCHC 2 cut(s) 501, 964
Mly113I GGCGCC 1 cut(s) 1380
MlyI GAGTC 2 cut(s) 824, 1880
MroI TCCGGA 1 cut(s) 379
MroXI GAANNNNTTC 4 cut(s) 650, 1160, 1575, 2217
MslI CAYNNNNRTG 4 cut(s) 660, 1165, 1340, 1637
MspCI CTTAAG 2 cut(s) 2542, 2642
MspI CCGG 2 cut(s) 72, 380
MunI CAATTG 3 cut(s) 535, 1755, 2327
Mva1269I GAATGC 2 cut(s) 303, 1031
MwoI GCNNNNNNNGC 6 cut(s) 195, 796, 1037, 1127, 1741, 1933
NarI GGCGCC 1 cut(s) 1380
NdeII GATC 6 cut(s) 531, 593, 750, 2000, 2671, 2700
NlaIV GGNNCC 3 cut(s) 287, 461, 1381
NmuCI GTSAC 2 cut(s) 37, 2721
NspI RCATGY 4 cut(s) 247, 1438, 1445, 1482
NspV TTCGAA 1 cut(s) 1321
OliI CACNNNNGTG 2 cut(s) 660, 1637
PaeI GCATGC 1 cut(s) 1438
PagI TCATGA 1 cut(s) 262
PceI AGGCCT 1 cut(s) 1110
PciI ACATGT 2 cut(s) 243, 1441
PciSI GCTCTTC 1 cut(s) 1959
PctI GAATGC 2 cut(s) 303, 1031
PdmI GAANNNNTTC 4 cut(s) 650, 1160, 1575, 2217
PfeI GAWTC 6 cut(s) 388, 470, 912, 1318, 1841, 2648
PkrI GCNGC 4 cut(s) 161, 1025, 1419, 1589
PleI GAGTC 2 cut(s) 823, 1880
PluTI GGCGCC 1 cut(s) 1383
PpsI GAGTC 2 cut(s) 823, 1880
PscI ACATGT 2 cut(s) 243, 1441
PshBI ATTAAT 1 cut(s) 2412
Psp124BI GAGCTC 1 cut(s) 501
PspN4I GGNNCC 3 cut(s) 287, 461, 1381
PspPI GGNCC 1 cut(s) 2143
PstI CTGCAG 1 cut(s) 760
PstNI CAGNNNCTG 1 cut(s) 799
PsuI RGATCY 2 cut(s) 750, 2700
RsaI GTAC 8 cut(s) 156, 827, 1784, 1902, 2406, 2482, 2631, 2685
RsaNI GTAC 8 cut(s) 155, 826, 1783, 1901, 2405, 2481, 2630, 2684
RseI CAYNNNNRTG 4 cut(s) 660, 1165, 1340, 1637
SacI GAGCTC 1 cut(s) 501
SapI GCTCTTC 1 cut(s) 1959
SatI GCNGC 4 cut(s) 160, 1024, 1418, 1588
Sau3AI GATC 6 cut(s) 531, 593, 750, 2000, 2671, 2700
Sau96I GGNCC 1 cut(s) 2143
ScaI AGTACT 1 cut(s) 1784
SchI GAGTC 2 cut(s) 824, 1880
SduI GDGCHC 2 cut(s) 501, 964
SfaNI GCATC 6 cut(s) 68, 444, 953, 994, 1476, 1706
SfcI CTRYAG 3 cut(s) 756, 791, 2508
SfoI GGCGCC 1 cut(s) 1381
SfuI TTCGAA 1 cut(s) 1321
SinI GGWCC 1 cut(s) 2143
SmiMI CAYNNNNRTG 4 cut(s) 660, 1165, 1340, 1637
SmlI CTYRAG 3 cut(s) 1778, 2542, 2642
SmoI CTYRAG 3 cut(s) 1778, 2542, 2642
SphI GCATGC 1 cut(s) 1438
SseBI AGGCCT 1 cut(s) 1110
SsiI CCGC 6 cut(s) 349, 457, 467, 591, 1501, 1588
SspDI GGCGCC 1 cut(s) 1379
SspMI CTAG 4 cut(s) 1628, 1736, 2346, 2752
SstI GAGCTC 1 cut(s) 501
StuI AGGCCT 1 cut(s) 1110
TaaI ACNGT 4 cut(s) 659, 1055, 1280, 1292
TaiI ACGT 6 cut(s) 179, 331, 942, 1680, 2299, 2723
TaqI TCGA 7 cut(s) 271, 910, 928, 993, 1164, 1321, 1697
TatI WGTACW 3 cut(s) 1782, 2404, 2480
TauI GCSGC 1 cut(s) 1590
TfiI GAWTC 6 cut(s) 388, 470, 912, 1318, 1841, 2648
TscAI CASTG 6 cut(s) 662, 1283, 1612, 1639, 1966, 2730
TseFI GTSAC 2 cut(s) 37, 2721
TseI GCWGC 3 cut(s) 159, 1023, 1417
Tsp45I GTSAC 2 cut(s) 37, 2721
TspDTI ATGAA 9 cut(s) 99, 223, 560, 779, 1013, 1386, 1473, 2183, 2220
TspGWI ACGGA 1 cut(s) 1418
TspRI CASTG 6 cut(s) 662, 1283, 1612, 1639, 1966, 2730
Vha464I CTTAAG 2 cut(s) 2542, 2642
VpaK11BI GGWCC 1 cut(s) 2143
VspI ATTAAT 1 cut(s) 2412
XapI RAATTY 4 cut(s) 725, 766, 1807, 2112
XbaI TCTAGA 1 cut(s) 2345
XceI RCATGY 4 cut(s) 247, 1438, 1445, 1482
XcmI CCANNNNNNNNNTGG 1 cut(s) 315
XmiI GTMKAC 1 cut(s) 1179
XmnI GAANNNNTTC 4 cut(s) 650, 1160, 1575, 2217
XspI CTAG 4 cut(s) 1628, 1736, 2346, 2752
ZraI GACGTC 1 cut(s) 329
ZrmI AGTACT 1 cut(s) 1784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.