Rmu_sc0004464.1_g000013

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004464.1
OG0000110
Physical Location & Seq
Forward (+)
53936 .. 57143
3208 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004464.1_g000013.1.cds

Sequence Viewer

Length: 2916 bp
atgggaaggagactgatcactggtagcatattacaagttagaagtgttggtcaagggttcttctgtgagctctcatatcttatcaaaaagatctatcaatacttgagagatcgagtatacggactgaaggctaagatggcctcatctgtaacagacctcttagcctcatctgtaacagacctcttaattggaaaacttgtgacgattcttgagaaagaaggaacagccatagctggtgttcgtgatgaagttgataaggttaaggaggagtttctgagcatgaaagctttcctagtggatgcagaagccaacaaagcaaaaactgaagcagagaaattgtgggttgcaagaatcagagacttagcctatgatgttgaagatatcattgatgaattcatgtatcacatgtatgagaagcaaagtgggggtcgacttagaagggggctacacaaaaccattcgcgctccacacaatctttggttcaggcataaaattgcaaagaagttgcagaaaattactggaatgatcaaagccaacccagagagaaatcaaagatacggtgttggccttgtaggaggagcaactacatctgaagatattcacaaattggtgcagagccaagctgagtcttcgtttttcattatggaagacgaactggttgggattgaaggcaagaagcaaatactaatgggatggctcatggatgaagagcaacaccaaactgttatatctgtggttggcatgggaggttctggaaagacaactctagtttccatgaccttcaacaatgaaagggtgaagagacattttcattgttgtgcgtggattaccgtttcccaaacttctcttgatgagggacacttgtttcgaagcttgatcatggaattctacaaatcaagaaaggaagatgtccctgaaaatttgaataccatgagcaggagacaattgatagagttactagttaactacttggagtccaaaaaatacctggttgtactagatgacgtgtgggatataaaagtttggagagaaataaaggtatcacttcaagataggcaactcagaagtcgaatcataattacaactcgaaaagaaggggtagcagccaattcttttggagttaaaagccatgttcaccgtattgaacccctgctaaaggatgaggcttgggagctcttctgcaaaaaagcattctcatctaatgagcacaaaacttgtccacctgattttgtgtcattaacttgccaacttgttgcaaagtgtagaggccttcctctggctattgtggctttaggtggtcttatgtcttccaagaattcgctggatcaatggcagcaagtctgcaacagcttgaattggcatctggataacaattcattgctggaccccgtgaaaaacatcttgttgctgagtttcaatgatttgccatctcaattgaaacattgcttcctctatttttctcttttcccagaagattttgaaattcaaagaaaaaggctcattagattgtggatagccgaaggatttgttgaacatgtgaaagggatcacacccgaagaagttgcagatggttatctttgggaactttgcttccgtagcatgttacaagttgttgagagaaatgtaacaggaaggccgagaaaagttaagatgcatgatctgatgcgagagcttgctttgttgacagccgagaaggaaaagtttggtcatgtatacgatgggagagaagtaatggaagagatctcaacccgtcgcttgtcaattcacaaaatggaaggagaaattaaatcatggccgggtatgtcaaagattcgttctcttcttgtatttgcaactgacatgtcctcatcgtctttctcaaatgcactggtttctcgattcaaattgttgaggactctagacttggaggatgtccaaattgataaactgccggatgcagttgttgacttgttcaacttgagatacttaaatttgaggaacactttaatcgaggaacttccagagtccatagggcgtctccgcaaccttcaatttctgaacctgaggtgtactaacatagagtcacttccacaaggaattgcaaagttgctagacctgcgccatctaactatgcatagcttccttgggagcgttctggacttcaaatttgtgagtgggacaagagcgccatcaaatatttgtcagttgcagaaattgcaatgtttatcaatgattgaatcagaaggggacactattagacttatcggcaacatgactcaactcaggagcatcggcatatcgaatgtgaaagaaagagatgagattgacctttgggtttcaattaagaagatgactctgcttcaaactttggttttaatggcaagtaatgcagaggaaatccttccggtgaaagcacaatgtccacctcttccgcaccttaaaaggcttgaattgtttggcagactgcaaaacgtaataccttggttttcttcactgcatagcctcacaaatctgtatctgcattggtcaagacttgaagaggatttactacctcaaattgaagcactgcccaatctgacacggctttttctttctaatgcatatgttggggaagagttgtgtttccgcagaggctttgtaaagctggagtcgttgaatttgtgggattttgcctcggtgaaaaagattagtatagaaaaaggggtgatgccaaatctccgggacttatgggttaaacagtgcatggaattgaagacaatgccactaggccttgaatacctttctaatctacaacttttggtgctagatgatgtccctatggaagttgtaaaggccattcggaaagaaggtgcggatcggtctaaggtacaacacatccccgagatcttacattttttcaaacagtcatccaagcgggtctacgaaaacttagcgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

971

Amino Acids

111.61

Weight (kDa)

8.78

Isoelectric Point (pI)

52.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2103
AccI GTMKAC 4 cut(s) 117, 430, 1713, 2898
AccII CGCG 1 cut(s) 462
AciI CCGC 5 cut(s) 2020, 2411, 2605, 2831, 2893
AclWI GGATC 3 cut(s) 1332, 1553, 2841
AcoI YGGCCR 1 cut(s) 1793
AcsI RAATTY 8 cut(s) 392, 884, 919, 1315, 1482, 1969, 2144, 2635
AcuI CTGAAG 3 cut(s) 146, 345, 612
AcyI GRCGYC 1 cut(s) 2014
AfaI GTAC 3 cut(s) 996, 2050, 2847
AfiI CCNNNNNNNGG 3 cut(s) 936, 1156, 1276
AflIII ACRYGT 4 cut(s) 405, 1005, 1534, 1839
AhlI ACTAGT 1 cut(s) 958
AjiI CACGTC 1 cut(s) 1006
AjnI CCWGG 1 cut(s) 987
AloI GAACNNNNNNTCC 2 cut(s) 1575, 1607
Alw21I GWGCWC 3 cut(s) 72, 1176, 1209
Alw26I GTCTC 5 cut(s) 4, 351, 796, 934, 2021
AlwI GGATC 3 cut(s) 1332, 1553, 2841
Ama87I CYCGRG 1 cut(s) 2858
AoxI GGCC 7 cut(s) 138, 565, 1267, 1634, 1793, 2746, 2811
ApeKI GCWGC 2 cut(s) 1103, 1333
ApoI RAATTY 8 cut(s) 392, 884, 919, 1315, 1482, 1969, 2144, 2635
ArsI GACNNNNNNTTYG 6 cut(s) 412, 444, 849, 881, 2129, 2161
Asp700I GAANNNNTTC 3 cut(s) 287, 597, 2379
AspLEI GCGC 3 cut(s) 464, 2100, 2167
AspS9I GGNCC 1 cut(s) 1384
AsuC2I CCSGG 2 cut(s) 1797, 2699
AsuHPI GGTGA 5 cut(s) 808, 1127, 2398, 2668, 2695
AsuII TTCGAA 1 cut(s) 868
AvaI CYCGRG 1 cut(s) 2858
AvaII GGWCC 1 cut(s) 1384
AxyI CCTNAGG 1 cut(s) 2042
BanII GRGCYC 2 cut(s) 72, 1176
BarI GAAGNNNNNNTAC 2 cut(s) 2508, 2540
BbsI GAAGAC 4 cut(s) 621, 654, 1299, 2738
Bbv12I GWGCWC 3 cut(s) 72, 1176, 1209
BbvI GCAGC 2 cut(s) 1115, 1345
BccI CCATC 7 cut(s) 130, 687, 1435, 1562, 1712, 2109, 2176
BceAI ACGGC 1 cut(s) 2576
BcgI CGANNNNNNTGC 2 cut(s) 1544, 1578
BciT130I CCWGG 1 cut(s) 989
BclI TGATCA 3 cut(s) 15, 525, 876
BcnI CCSGG 2 cut(s) 1797, 2699
BcoDI GTCTC 5 cut(s) 4, 351, 796, 934, 2021
BcuI ACTAGT 1 cut(s) 958
BfaI CTAG 8 cut(s) 293, 767, 959, 998, 1898, 2090, 2744, 2783
BfoI RGCGCY 1 cut(s) 2168
BfuAI ACCTGC 1 cut(s) 2103
BglII AGATCT 3 cut(s) 90, 1740, 2862
BisI GCNGC 2 cut(s) 1104, 1334
BlsI GCNGC 2 cut(s) 1105, 1335
Bme1390I CCNGG 3 cut(s) 989, 1797, 2699
Bme18I GGWCC 1 cut(s) 1384
BmeT110I CYCGRG 1 cut(s) 2858
BmgBI CACGTC 1 cut(s) 1006
BmgT120I GGNCC 1 cut(s) 1384
BmiI GGNNCC 1 cut(s) 1386
BmrFI CCNGG 3 cut(s) 989, 1797, 2699
BmsI GCATC 7 cut(s) 289, 1369, 1641, 1653, 1924, 2277, 2676
BpiI GAAGAC 4 cut(s) 621, 654, 1299, 2738
BpmI CTGGAG 1 cut(s) 2645
Bpu14I TTCGAA 1 cut(s) 868
BpuEI CTTGAG 3 cut(s) 124, 230, 1978
BpuMI CCSGG 2 cut(s) 1797, 2699
BsaBI GATNNNNATC 1 cut(s) 1572
BsaHI GRCGYC 1 cut(s) 2014
BsaJI CCNNGG 3 cut(s) 2122, 2459, 2652
BsaWI WCCGGW 1 cut(s) 2383
Bsc4I CCNNNNNNNGG 3 cut(s) 936, 1156, 1276
Bse1I ACTGG 4 cut(s) 25, 523, 660, 1872
Bse21I CCTNAGG 1 cut(s) 2042
Bse3DI GCAATG 3 cut(s) 1376, 1441, 2204
Bse8I GATNNNNATC 1 cut(s) 1572
BseBI CCWGG 1 cut(s) 989
BseDI CCNNGG 3 cut(s) 2122, 2459, 2652
BseGI GGATG 8 cut(s) 304, 698, 709, 1165, 1915, 1939, 2853, 2885
BseJI GATNNNNATC 1 cut(s) 1572
BseLI CCNNNNNNNGG 3 cut(s) 936, 1156, 1276
BseMI GCAATG 3 cut(s) 1376, 1441, 2204
BseMII CTCAG 6 cut(s) 266, 615, 1075, 1400, 2033, 2275
BseNI ACTGG 4 cut(s) 25, 523, 660, 1872
BseRI GAGGAG 2 cut(s) 281, 591
BseXI GCAGC 2 cut(s) 1115, 1345
BsgI GTGCAG 1 cut(s) 632
Bsh1236I CGCG 1 cut(s) 462
BshFI GGCC 7 cut(s) 140, 567, 1269, 1636, 1795, 2748, 2813
BsiHKAI GWGCWC 3 cut(s) 72, 1176, 1209
BsiHKCI CYCGRG 1 cut(s) 2858
BsiSI CCGG 4 cut(s) 1796, 1931, 2384, 2698
BslFI GGGAC 6 cut(s) 870, 896, 2170, 2240, 2714, 2777
BslI CCNNNNNNNGG 3 cut(s) 936, 1156, 1276
BsmAI GTCTC 5 cut(s) 4, 351, 796, 934, 2021
BsmBI CGTCTC 1 cut(s) 2021
BsmFI GGGAC 6 cut(s) 870, 896, 2170, 2240, 2714, 2777
BsmI GAATGC 1 cut(s) 1190
BsnI GGCC 7 cut(s) 140, 567, 1269, 1636, 1795, 2748, 2813
BsoBI CYCGRG 1 cut(s) 2858
Bsp119I TTCGAA 1 cut(s) 868
Bsp1286I GDGCHC 3 cut(s) 72, 1176, 1209
BspACI CCGC 5 cut(s) 2020, 2411, 2605, 2831, 2893
BspANI GGCC 7 cut(s) 140, 567, 1269, 1636, 1795, 2748, 2813
BspCNI CTCAG 6 cut(s) 267, 616, 1074, 1401, 2034, 2274
BspFNI CGCG 1 cut(s) 462
BspLI GGNNCC 1 cut(s) 1386
BspMI ACCTGC 1 cut(s) 2103
BspPI GGATC 3 cut(s) 1332, 1553, 2841
BspQI GCTCTTC 2 cut(s) 702, 1181
BspT104I TTCGAA 1 cut(s) 868
BsrDI GCAATG 3 cut(s) 1376, 1441, 2204
BsrI ACTGG 4 cut(s) 25, 523, 660, 1872
BssECI CCNNGG 3 cut(s) 2122, 2459, 2652
BssNAI GTATAC 2 cut(s) 118, 1714
BssNI GRCGYC 1 cut(s) 2014
BssT1I CCWWGG 2 cut(s) 2122, 2459
Bst1107I GTATAC 2 cut(s) 118, 1714
Bst2UI CCWGG 1 cut(s) 989
Bst4CI ACNGT 6 cut(s) 560, 724, 832, 1139, 2718, 2883
Bst6I CTCTTC 8 cut(s) 702, 794, 1181, 1731, 1824, 2412, 2511, 2586
BstACI GRCGYC 1 cut(s) 2014
BstAPI GCANNNNNTGC 2 cut(s) 2194, 2366
BstBI TTCGAA 1 cut(s) 868
BstC8I GCNNGC 1 cut(s) 1674
BstENI CCTNNNNNAGG 1 cut(s) 1154
BstF5I GGATG 8 cut(s) 304, 698, 709, 1165, 1915, 1939, 2853, 2885
BstFNI CGCG 1 cut(s) 462
BstH2I RGCGCY 1 cut(s) 2168
BstHHI GCGC 3 cut(s) 464, 2100, 2167
BstMAI GTCTC 5 cut(s) 4, 351, 796, 934, 2021
BstMWI GCNNNNNNNGC 7 cut(s) 137, 314, 1286, 1596, 2095, 2194, 2366
BstNI CCWGG 1 cut(s) 989
BstNSI RCATGY 4 cut(s) 409, 1538, 1603, 1843
BstSCI CCNGG 3 cut(s) 987, 1795, 2697
BstUI CGCG 1 cut(s) 462
BstV1I GCAGC 2 cut(s) 1115, 1345
BstV2I GAAGAC 4 cut(s) 621, 654, 1299, 2738
BstX2I RGATCY 3 cut(s) 90, 1740, 2862
BstYI RGATCY 3 cut(s) 90, 1740, 2862
BstZ17I GTATAC 2 cut(s) 118, 1714
Bsu36I CCTNAGG 1 cut(s) 2042
BsuRI GGCC 7 cut(s) 140, 567, 1269, 1636, 1795, 2748, 2813
BtrI CACGTC 1 cut(s) 1006
BtsCI GGATG 8 cut(s) 304, 698, 709, 1165, 1915, 1939, 2853, 2885
BtsI GCAGTG 2 cut(s) 2471, 2543
BtsIMutI CAGTG 5 cut(s) 18, 1865, 2471, 2543, 2723
BveI ACCTGC 1 cut(s) 2103
Cac8I GCNNGC 1 cut(s) 1674
CfoI GCGC 3 cut(s) 464, 2100, 2167
Cfr13I GGNCC 1 cut(s) 1384
CseI GACGC 1 cut(s) 2003
CsiI ACCWGGT 1 cut(s) 987
Csp6I GTAC 3 cut(s) 995, 2049, 2846
CviQI GTAC 3 cut(s) 995, 2049, 2846
EaeI YGGCCR 1 cut(s) 1793
Eam1104I CTCTTC 8 cut(s) 702, 794, 1181, 1731, 1824, 2412, 2511, 2586
EarI CTCTTC 8 cut(s) 702, 794, 1181, 1731, 1824, 2412, 2511, 2586
Ecl136II GAGCTC 2 cut(s) 70, 1174
Eco130I CCWWGG 2 cut(s) 2122, 2459
Eco147I AGGCCT 2 cut(s) 1269, 2748
Eco24I GRGCYC 2 cut(s) 72, 1176
Eco32I GATATC 1 cut(s) 382
Eco47I GGWCC 1 cut(s) 1384
Eco53kI GAGCTC 2 cut(s) 70, 1174
Eco57I CTGAAG 3 cut(s) 146, 345, 612
Eco81I CCTNAGG 1 cut(s) 2042
Eco88I CYCGRG 1 cut(s) 2858
EcoICRI GAGCTC 2 cut(s) 70, 1174
EcoNI CCTNNNNNAGG 1 cut(s) 1154
EcoRI GAATTC 3 cut(s) 392, 884, 1315
EcoRII CCWGG 1 cut(s) 987
EcoRV GATATC 1 cut(s) 382
EcoT14I CCWWGG 2 cut(s) 2122, 2459
EcoT22I ATGCAT 3 cut(s) 1656, 2115, 2581
EcoT38I GRGCYC 2 cut(s) 72, 1176
ErhI CCWWGG 2 cut(s) 2122, 2459
Esp3I CGTCTC 1 cut(s) 2021
FaqI GGGAC 6 cut(s) 870, 896, 2170, 2240, 2714, 2777
FauI CCCGC 1 cut(s) 2886
FauNDI CATATG 1 cut(s) 2581
FbaI TGATCA 3 cut(s) 15, 525, 876
FblI GTMKAC 4 cut(s) 117, 430, 1713, 2898
Fnu4HI GCNGC 2 cut(s) 1104, 1334
FokI GGATG 8 cut(s) 311, 705, 716, 1172, 1922, 1946, 2840, 2872
FriOI GRGCYC 2 cut(s) 72, 1176
Fsp4HI GCNGC 2 cut(s) 1104, 1334
FspBI CTAG 8 cut(s) 293, 767, 959, 998, 1898, 2090, 2744, 2783
GlaI GCGC 3 cut(s) 463, 2099, 2166
GluI GCNGC 2 cut(s) 1104, 1334
GsuI CTGGAG 1 cut(s) 2645
HaeII RGCGCY 1 cut(s) 2168
HaeIII GGCC 7 cut(s) 140, 567, 1269, 1636, 1795, 2748, 2813
HapII CCGG 4 cut(s) 1796, 1931, 2384, 2698
HgaI GACGC 1 cut(s) 2003
HhaI GCGC 3 cut(s) 464, 2100, 2167
Hin1I GRCGYC 1 cut(s) 2014
Hin6I GCGC 3 cut(s) 462, 2098, 2165
HinP1I GCGC 3 cut(s) 462, 2098, 2165
HincII GTYRAC 4 cut(s) 431, 964, 1683, 1945
HindII GTYRAC 4 cut(s) 431, 964, 1683, 1945
HindIII AAGCTT 2 cut(s) 285, 871
HpaI GTTAAC 1 cut(s) 964
HpaII CCGG 4 cut(s) 1796, 1931, 2384, 2698
HphI GGTGA 5 cut(s) 808, 1127, 2398, 2668, 2695
Hpy188I TCNGA 9 cut(s) 276, 356, 592, 1064, 1662, 2037, 2221, 2556, 2820
Hpy99I CGWCG 1 cut(s) 1755
HpyCH4III ACNGT 6 cut(s) 560, 724, 832, 1139, 2718, 2883
HpyCH4IV ACGT 2 cut(s) 1005, 2451
HpyF10VI GCNNNNNNNGC 7 cut(s) 137, 314, 1286, 1596, 2095, 2194, 2366
HpySE526I ACGT 2 cut(s) 1005, 2451
Hsp92I GRCGYC 1 cut(s) 2014
HspAI GCGC 3 cut(s) 462, 2098, 2165
Ksp22I TGATCA 3 cut(s) 15, 525, 876
KspAI GTTAAC 1 cut(s) 964
LguI GCTCTTC 2 cut(s) 702, 1181
LmnI GCTCC 5 cut(s) 469, 578, 1171, 2127, 2265
Lsp1109I GCAGC 2 cut(s) 1115, 1345
LweI GCATC 7 cut(s) 289, 1369, 1641, 1653, 1924, 2277, 2676
MabI ACCWGGT 1 cut(s) 987
MaeI CTAG 8 cut(s) 293, 767, 959, 998, 1898, 2090, 2744, 2783
MaeII ACGT 2 cut(s) 1005, 2451
MaeIII GTNAC 7 cut(s) 148, 172, 199, 954, 1602, 1624, 2061
MfeI CAATTG 2 cut(s) 944, 1433
MflI RGATCY 3 cut(s) 90, 1740, 2862
MhlI GDGCHC 3 cut(s) 72, 1176, 1209
MlyI GAGTC 8 cut(s) 635, 983, 1888, 2012, 2069, 2248, 2326, 2636
Mph1103I ATGCAT 3 cut(s) 1656, 2115, 2581
MroXI GAANNNNTTC 3 cut(s) 287, 597, 2379
MslI CAYNNNNRTG 2 cut(s) 408, 816
MspI CCGG 4 cut(s) 1796, 1931, 2384, 2698
MspR9I CCNGG 3 cut(s) 989, 1797, 2699
MunI CAATTG 2 cut(s) 944, 1433
Mva1269I GAATGC 1 cut(s) 1190
MvaI CCWGG 1 cut(s) 989
MvnI CGCG 1 cut(s) 462
MwoI GCNNNNNNNGC 7 cut(s) 137, 314, 1286, 1596, 2095, 2194, 2366
NciI CCSGG 2 cut(s) 1797, 2699
NdeI CATATG 1 cut(s) 2581
NlaIV GGNNCC 1 cut(s) 1386
NmeAIII GCCGAG 2 cut(s) 1662, 1714
NmuCI GTSAC 2 cut(s) 199, 2061
NsiI ATGCAT 3 cut(s) 1656, 2115, 2581
NspI RCATGY 4 cut(s) 409, 1538, 1603, 1843
NspV TTCGAA 1 cut(s) 868
PceI AGGCCT 2 cut(s) 1269, 2748
PciI ACATGT 3 cut(s) 405, 1534, 1839
PciSI GCTCTTC 2 cut(s) 702, 1181
PctI GAATGC 1 cut(s) 1190
PdmI GAANNNNTTC 3 cut(s) 287, 597, 2379
PfeI GAWTC 6 cut(s) 205, 351, 1071, 1810, 1878, 2216
PfoI TCCNGGA 1 cut(s) 2697
PkrI GCNGC 2 cut(s) 1105, 1335
PleI GAGTC 8 cut(s) 634, 982, 1888, 2011, 2068, 2248, 2326, 2635
PpsI GAGTC 8 cut(s) 634, 982, 1888, 2011, 2068, 2248, 2326, 2635
PscI ACATGT 3 cut(s) 405, 1534, 1839
Psp124BI GAGCTC 2 cut(s) 72, 1176
Psp6I CCWGG 1 cut(s) 987
PspGI CCWGG 1 cut(s) 987
PspN4I GGNNCC 1 cut(s) 1386
PspPI GGNCC 1 cut(s) 1384
PsuI RGATCY 3 cut(s) 90, 1740, 2862
RsaI GTAC 3 cut(s) 996, 2050, 2847
RsaNI GTAC 3 cut(s) 995, 2049, 2846
RseI CAYNNNNRTG 2 cut(s) 408, 816
SacI GAGCTC 2 cut(s) 72, 1176
SalI GTCGAC 1 cut(s) 429
SapI GCTCTTC 2 cut(s) 702, 1181
SatI GCNGC 2 cut(s) 1104, 1334
Sau96I GGNCC 1 cut(s) 1384
SchI GAGTC 8 cut(s) 635, 983, 1888, 2012, 2069, 2248, 2326, 2636
ScrFI CCNGG 3 cut(s) 989, 1797, 2699
SduI GDGCHC 3 cut(s) 72, 1176, 1209
SexAI ACCWGGT 1 cut(s) 987
SfaNI GCATC 7 cut(s) 289, 1369, 1641, 1653, 1924, 2277, 2676
SfuI TTCGAA 1 cut(s) 868
SinI GGWCC 1 cut(s) 1384
SmiMI CAYNNNNRTG 2 cut(s) 408, 816
SmlI CTYRAG 3 cut(s) 103, 209, 1957
SmoI CTYRAG 3 cut(s) 103, 209, 1957
SpeI ACTAGT 1 cut(s) 958
SseBI AGGCCT 2 cut(s) 1269, 2748
SsiI CCGC 5 cut(s) 2020, 2411, 2605, 2831, 2893
SspI AATATT 1 cut(s) 2176
SspMI CTAG 8 cut(s) 293, 767, 959, 998, 1898, 2090, 2744, 2783
SstI GAGCTC 2 cut(s) 72, 1176
StuI AGGCCT 2 cut(s) 1269, 2748
StyD4I CCNGG 3 cut(s) 987, 1795, 2697
StyI CCWWGG 2 cut(s) 2122, 2459
TaaI ACNGT 6 cut(s) 560, 724, 832, 1139, 2718, 2883
TaiI ACGT 2 cut(s) 1008, 2454
TaqI TCGA 8 cut(s) 112, 430, 868, 1069, 1087, 1876, 1989, 2279
TaqII GACCGA 1 cut(s) 2826
TatI WGTACW 2 cut(s) 994, 2048
TfiI GAWTC 6 cut(s) 205, 351, 1071, 1810, 1878, 2216
TscAI CASTG 5 cut(s) 25, 1872, 2478, 2550, 2723
TseFI GTSAC 2 cut(s) 199, 2061
TseI GCWGC 2 cut(s) 1103, 1333
Tsp45I GTSAC 2 cut(s) 199, 2061
TspDTI ATGAA 9 cut(s) 261, 296, 385, 405, 628, 720, 800, 804, 1365
TspGWI ACGGA 2 cut(s) 135, 1583
TspRI CASTG 5 cut(s) 25, 1872, 2478, 2550, 2723
VpaK11BI GGWCC 1 cut(s) 1384
XagI CCTNNNNNAGG 1 cut(s) 1154
XapI RAATTY 8 cut(s) 392, 884, 919, 1315, 1482, 1969, 2144, 2635
XbaI TCTAGA 1 cut(s) 1897
XceI RCATGY 4 cut(s) 409, 1538, 1603, 1843
XcmI CCANNNNNNNNNTGG 3 cut(s) 474, 985, 1318
XmiI GTMKAC 4 cut(s) 117, 430, 1713, 2898
XmnI GAANNNNTTC 3 cut(s) 287, 597, 2379
XspI CTAG 8 cut(s) 293, 767, 959, 998, 1898, 2090, 2744, 2783
Zsp2I ATGCAT 3 cut(s) 1656, 2115, 2581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.