Prupe.8G009300_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000110
Physical Location & Seq
Forward (+)
688670 .. 691488
2819 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G009300.1

Sequence Viewer

Length: 2340 bp
ATGTTAAGTGAGGGAACATTTGCAACCGATCTCTTGATTGGCAAAGTTGTAGGCATTCTTGAGAGCGAAGCATCCTCAATAGTAGGTGTTCGTGATCAAGTTGACGAGATTAAGCAAGAGCTTATAAGCATGAAATCCTTCCTAAAGGATGCTGAGGGGAAGAAACCGCGGACGGAAGGAGAGGAGACATGGGTAGATAGCTTGAGAGATTTGGCCTATGATGTTGAAGATATCATTGATAAGTTCATGTACCACATGCATGAGGGTCGATTTGCACGCTGCCTTCACAAAGCCATTCACATTGCAAAGAAACTTTGGTATAGGCGTCAAATTGGCAAAAAGTTACAGAAAATCACAAAAACCATCAAGGACATTACAGAGAGGAATCAAAGATACGATATTGATCCCCTAGAAGGAACAAAGTCTTCCCTTTTTATTAAGGAAGACGAACTTGTGGGGATTGAACACAAGAAGCAAGTATTGATGGGATGGCTGATGAACGGAGAACAACAACAAGCGGTTATCTCTGTGGTCGGGATGGGAGGATCAGGGAAGACAACTCTAGTTGCAAAAGCCTTCAGCAGTGAAAGTGTGAAGAGGCATTTCAGCTGTTATGCGTGGATTACGGTTTCCCAAAGTTATGTGATTGAAGATTTGTTTAGAAGATTGATCAAGGAAGTCCACCAAGCAACGAAGGAAGAGGTCCCTGCAGCTGCAGACTTAAATTCCATGAGCTATAGGGAATTGCTACATATACTTGTAACCTACTTGGAGTCTAGAAGGTACCTAGTTGTATTGGATGATGCGTGGGATATAAAACTTTTGAAAGAAATGAGGATAGCACTTCCAAATAGACAGCTTGGAAGTCGAATCATGCTCACTACTCGAAAAGAAGACATAGCCTTCTATTCTTTTGTAGTAGAAGGCCATGTTCATCGTATTCAACCGCCTACCCTAGCAGTTGTAGCTTTAGGTGGTCTTATGTCTTCCAAGGAGTCATCTACGGAGTGGAGAAAAGTCTGCAACAGTATAAATTGGCATCTAATAAATGATCATTTCCTAGAACCTGTGAAGACAATCTTGTTTCTCAGTTTCAACGATTTGCCATATCGACTGAAACATTGCTTCCTATATTGTTCAATTTTCCCAGAAGATTATTTGATTCGAGCAGAAAGGCTTATTAGATTGTGGATAGCTGAATGCTTCGTTGAACATGTTAAAGGGGTCACACTGGAAGAAGTTTCTGAGAGCTATCTTATGGAACTCAATTTTCGTATGATGTTGCCGGTGGTAAGGTGTCCAACTATAAGACAAGCATGTAAGATGCACAATCTTATGCGGGAGCTTGCTTTGTCCACATTAGAGCTCGTCGTTTGTCAATTCAGTCATCTGAAGGAGAAATTAAATACATTGCTTTCTCAATTCAAATTGTTGAGGATTCTAGATTTGGAGGATGTACCAATTGAAGAACTGCCTGATGGTCTTATATACTTATTCAACTTAAGATATTTAAGTTTGAGTAGAACTTCAATTAAAAAACTTCCAGAATCCATAGGACAGCTTTGCAATCTTCAAACCTTAGACATCAGCGACACAGAGATTGAAACACTTCCGAAAGAAATTGCCAAGTTGGTAAGCCTACGCCATCTAATTATGTATCGATACAGTGGTGCATCTTGGGAATTTAGATATGCTAAAGGGATTAGAGCACCATCAAATATTTGTATGTTGAAAAAATTGCAAGTTTTGTCATTTGTTGAATCAGACTCGGAAGGAAACTTTTTTAAACTTGTTGGGAACATAACCCAACTTACTCACATTGGCATTACAAATGTAAAAGGAAGTAATGAGATGAACCTTTGTGCTTCCATTCAAAAGATGAAGCTCCTTCGCTACCTGCTTCTTTTGAGCAGCAAACTAGCAACTGTACCAAATTGGTTTGCTTCACTCAGGAGCCTCACAGATTTCAGTCTACGTTGGTCTAGACTTAAAAGGCTTATCCTTGTTAATGCCTATGTTGGGAATGAGTTGTGCATCAATATAGGCTTTGCAAGGCTCACACATTTGGAGTTGCTTAATTTCCCCTTCTTGAAAAATATAACAATAGAAGGTGTGATGCCGAAACTCCAGTTGTTAATACTTCATTGCTGCATGAAATTAAAGGCGTTACCACACAGTCCTGAATTCCTTAGGAATCTAGAAACATTGAGATTGGGGTCTGTTCTGATGAAAATTACAGAAAATATACGAGAAGGAGGCGTGGATCATCCAAAGGTACAGCACATCCGCGAAATTGACCAAATTTACGAAACATCATCTCTGACTTCTTCTGCAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

780

Amino Acids

89.69

Weight (kDa)

8.72

Isoelectric Point (pI)

48.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 125
Acc36I ACCTGC 1 cut(s) 1905
Acc65I GGTACC 1 cut(s) 783
AccB1I GGYRCC 1 cut(s) 783
AccI GTMKAC 1 cut(s) 1972
AccII CGCG 2 cut(s) 169, 2289
AciI CCGC 6 cut(s) 167, 169, 518, 947, 1339, 2287
AclWI GGATC 3 cut(s) 398, 553, 2271
AcsI RAATTY 4 cut(s) 724, 1682, 2183, 2301
AcuI CTGAAG 2 cut(s) 562, 1412
AcyI GRCGYC 1 cut(s) 325
AfaI GTAC 5 cut(s) 251, 785, 1458, 1929, 2277
AfiI CCNNNNNNNGG 2 cut(s) 413, 2019
AflII CTTAAG 1 cut(s) 1501
AflIII ACRYGT 1 cut(s) 1213
Alw21I GWGCWC 2 cut(s) 1368, 1711
Alw26I GTCTC 1 cut(s) 179
AlwI GGATC 3 cut(s) 398, 553, 2271
AoxI GGCC 2 cut(s) 213, 925
ApeKI GCWGC 5 cut(s) 279, 710, 713, 1911, 2148
ApoI RAATTY 4 cut(s) 724, 1682, 2183, 2301
Asp700I GAANNNNTTC 2 cut(s) 137, 1608
Asp718I GGTACC 1 cut(s) 783
AspS9I GGNCC 1 cut(s) 703
AvaII GGWCC 1 cut(s) 703
AxyI CCTNAGG 1 cut(s) 2189
BaeI ACNNNNGTAYC 2 cut(s) 1654, 1687
BanI GGYRCC 1 cut(s) 783
BanII GRGCYC 1 cut(s) 1368
BbsI GAAGAC 6 cut(s) 417, 450, 560, 900, 978, 1079
Bbv12I GWGCWC 2 cut(s) 1368, 1711
BbvCI CCTCAGC 1 cut(s) 153
BbvI GCAGC 5 cut(s) 266, 700, 722, 1923, 2135
BccI CCATC 7 cut(s) 371, 478, 483, 532, 1472, 1653, 1720
BcgI CGANNNNNNTGC 2 cut(s) 248, 282
BclI TGATCA 3 cut(s) 94, 669, 1051
BcoDI GTCTC 1 cut(s) 179
BfmI CTRYAG 3 cut(s) 708, 714, 736
BfrI CTTAAG 1 cut(s) 1501
BfuAI ACCTGC 1 cut(s) 1905
BisI GCNGC 5 cut(s) 280, 711, 714, 1912, 2149
BlsI GCNGC 5 cut(s) 281, 712, 715, 1913, 2150
Bme18I GGWCC 1 cut(s) 703
BmgT120I GGNCC 1 cut(s) 703
BmiI GGNNCC 3 cut(s) 705, 785, 1955
BmsI GCATC 8 cut(s) 80, 139, 793, 1048, 1314, 1682, 2043, 2106
BpiI GAAGAC 6 cut(s) 417, 450, 560, 900, 978, 1079
BpmI CTGGAG 1 cut(s) 2111
Bpu10I CCTNAGC 1 cut(s) 153
BpuEI CTTGAG 2 cut(s) 80, 223
Bsa29I ATCGAT 1 cut(s) 1660
BsaBI GATNNNNATC 1 cut(s) 402
BsaHI GRCGYC 1 cut(s) 325
BsaJI CCNNGG 2 cut(s) 167, 990
Bsc4I CCNNNNNNNGG 2 cut(s) 413, 2019
Bse118I RCCGGY 1 cut(s) 1285
Bse1I ACTGG 2 cut(s) 1236, 2128
Bse21I CCTNAGG 1 cut(s) 2189
Bse3DI GCAATG 4 cut(s) 300, 1120, 1409, 2143
Bse8I GATNNNNATC 1 cut(s) 402
BseCI ATCGAT 1 cut(s) 1660
BseDI CCNNGG 2 cut(s) 167, 990
BseGI GGATG 8 cut(s) 71, 154, 494, 543, 805, 1459, 2266, 2283
BseJI GATNNNNATC 1 cut(s) 402
BseLI CCNNNNNNNGG 2 cut(s) 413, 2019
BseMI GCAATG 4 cut(s) 300, 1120, 1409, 2143
BseMII CTCAG 4 cut(s) 144, 1102, 1236, 1963
BseNI ACTGG 2 cut(s) 1236, 2128
BseRI GAGGAG 1 cut(s) 197
BseXI GCAGC 5 cut(s) 266, 700, 722, 1923, 2135
Bsh1236I CGCG 2 cut(s) 169, 2289
BshFI GGCC 2 cut(s) 215, 927
BshNI GGYRCC 1 cut(s) 783
BshVI ATCGAT 1 cut(s) 1660
BsiHKAI GWGCWC 2 cut(s) 1368, 1711
BsiSI CCGG 1 cut(s) 1286
BslFI GGGAC 1 cut(s) 689
BslI CCNNNNNNNGG 2 cut(s) 413, 2019
BsmAI GTCTC 1 cut(s) 179
BsmFI GGGAC 1 cut(s) 689
BsmI GAATGC 2 cut(s) 54, 1205
BsnI GGCC 2 cut(s) 215, 927
Bsp1286I GDGCHC 2 cut(s) 1368, 1711
Bsp143I GATC 7 cut(s) 28, 94, 403, 545, 669, 1051, 2263
BspACI CCGC 6 cut(s) 167, 169, 518, 947, 1339, 2287
BspANI GGCC 2 cut(s) 215, 927
BspCNI CTCAG 4 cut(s) 145, 1101, 1237, 1962
BspDI ATCGAT 1 cut(s) 1660
BspFNI CGCG 2 cut(s) 169, 2289
BspLI GGNNCC 3 cut(s) 705, 785, 1955
BspMAI CTGCAG 2 cut(s) 712, 718
BspMI ACCTGC 1 cut(s) 1905
BspPI GGATC 3 cut(s) 398, 553, 2271
BspT107I GGYRCC 1 cut(s) 783
BspTI CTTAAG 1 cut(s) 1501
BsrDI GCAATG 4 cut(s) 300, 1120, 1409, 2143
BsrFI RCCGGY 1 cut(s) 1285
BsrI ACTGG 2 cut(s) 1236, 2128
BssAI RCCGGY 1 cut(s) 1285
BssECI CCNNGG 2 cut(s) 167, 990
BssMI GATC 7 cut(s) 28, 94, 403, 545, 669, 1051, 2263
BssNI GRCGYC 1 cut(s) 325
BssT1I CCWWGG 1 cut(s) 990
Bst4CI ACNGT 5 cut(s) 628, 1028, 1667, 1927, 2177
Bst6I CTCTTC 2 cut(s) 590, 693
BstACI GRCGYC 1 cut(s) 325
BstAFI CTTAAG 1 cut(s) 1501
BstC8I GCNNGC 2 cut(s) 277, 1347
BstDEI CTNAG 6 cut(s) 153, 1088, 1245, 1579, 1949, 2189
BstDSI CCRYGG 1 cut(s) 167
BstF5I GGATG 8 cut(s) 71, 154, 494, 543, 805, 1459, 2266, 2283
BstFNI CGCG 2 cut(s) 169, 2289
BstKTI GATC 7 cut(s) 31, 97, 406, 548, 672, 1054, 2266
BstMAI GTCTC 1 cut(s) 179
BstMBI GATC 7 cut(s) 28, 94, 403, 545, 669, 1051, 2263
BstMWI GCNNNNNNNGC 1 cut(s) 965
BstNSI RCATGY 3 cut(s) 259, 1217, 1320
BstSFI CTRYAG 3 cut(s) 708, 714, 736
BstUI CGCG 2 cut(s) 169, 2289
BstV1I GCAGC 5 cut(s) 266, 700, 722, 1923, 2135
BstV2I GAAGAC 6 cut(s) 417, 450, 560, 900, 978, 1079
Bsu15I ATCGAT 1 cut(s) 1660
Bsu36I CCTNAGG 1 cut(s) 2189
BsuRI GGCC 2 cut(s) 215, 927
BsuTUI ATCGAT 1 cut(s) 1660
BtgI CCRYGG 1 cut(s) 167
BtsCI GGATG 8 cut(s) 71, 154, 494, 543, 805, 1459, 2266, 2283
BtsI GCAGTG 1 cut(s) 589
BtsIMutI CAGTG 3 cut(s) 589, 1229, 1672
BveI ACCTGC 1 cut(s) 1905
Cac8I GCNNGC 2 cut(s) 277, 1347
Cfr10I RCCGGY 1 cut(s) 1285
Cfr13I GGNCC 1 cut(s) 703
Cfr42I CCGCGG 1 cut(s) 170
ClaI ATCGAT 1 cut(s) 1660
CseI GACGC 1 cut(s) 314
Csp6I GTAC 5 cut(s) 250, 784, 1457, 1928, 2276
CviQI GTAC 5 cut(s) 250, 784, 1457, 1928, 2276
DdeI CTNAG 6 cut(s) 153, 1088, 1245, 1579, 1949, 2189
DpnI GATC 7 cut(s) 30, 96, 405, 547, 671, 1053, 2265
DpnII GATC 7 cut(s) 28, 94, 403, 545, 669, 1051, 2263
DraI TTTAAA 1 cut(s) 1786
Eam1104I CTCTTC 2 cut(s) 590, 693
EarI CTCTTC 2 cut(s) 590, 693
Ecl136II GAGCTC 1 cut(s) 1366
Eco130I CCWWGG 1 cut(s) 990
Eco24I GRGCYC 1 cut(s) 1368
Eco32I GATATC 1 cut(s) 232
Eco47I GGWCC 1 cut(s) 703
Eco53kI GAGCTC 1 cut(s) 1366
Eco57I CTGAAG 2 cut(s) 562, 1412
Eco81I CCTNAGG 1 cut(s) 2189
EcoICRI GAGCTC 1 cut(s) 1366
EcoO109I RGGNCCY 1 cut(s) 703
EcoRI GAATTC 1 cut(s) 2183
EcoRV GATATC 1 cut(s) 232
EcoT14I CCWWGG 1 cut(s) 990
EcoT22I ATGCAT 1 cut(s) 261
EcoT38I GRGCYC 1 cut(s) 1368
ErhI CCWWGG 1 cut(s) 990
FalI AAGNNNNNCTT 4 cut(s) 435, 467, 1064, 1096
FaqI GGGAC 1 cut(s) 689
FauI CCCGC 1 cut(s) 1332
FbaI TGATCA 3 cut(s) 94, 669, 1051
FblI GTMKAC 1 cut(s) 1972
Fnu4HI GCNGC 5 cut(s) 280, 711, 714, 1912, 2149
FokI GGATG 8 cut(s) 58, 161, 501, 550, 812, 1466, 2253, 2270
FriOI GRGCYC 1 cut(s) 1368
Fsp4HI GCNGC 5 cut(s) 280, 711, 714, 1912, 2149
GluI GCNGC 5 cut(s) 280, 711, 714, 1912, 2149
GsuI CTGGAG 1 cut(s) 2111
HaeIII GGCC 2 cut(s) 215, 927
HapII CCGG 1 cut(s) 1286
HgaI GACGC 1 cut(s) 314
Hin1I GRCGYC 1 cut(s) 325
HincII GTYRAC 1 cut(s) 103
HindII GTYRAC 1 cut(s) 103
HpaII CCGG 1 cut(s) 1286
Hpy166II GTNNAC 4 cut(s) 103, 682, 1356, 1973
Hpy188I TCNGA 7 cut(s) 1246, 1392, 1614, 1765, 1771, 2226, 2322
Hpy8I GTNNAC 4 cut(s) 103, 682, 1356, 1973
Hpy99I CGWCG 1 cut(s) 1373
HpyCH4III ACNGT 5 cut(s) 628, 1028, 1667, 1927, 2177
HpyCH4IV ACGT 1 cut(s) 1975
HpyF10VI GCNNNNNNNGC 1 cut(s) 965
HpyF3I CTNAG 6 cut(s) 153, 1088, 1245, 1579, 1949, 2189
HpySE526I ACGT 1 cut(s) 1975
Hsp92I GRCGYC 1 cut(s) 325
KpnI GGTACC 1 cut(s) 787
Ksp22I TGATCA 3 cut(s) 94, 669, 1051
KspI CCGCGG 1 cut(s) 170
Kzo9I GATC 7 cut(s) 28, 94, 403, 545, 669, 1051, 2263
LmnI GCTCC 3 cut(s) 1342, 1890, 1953
Lsp1109I GCAGC 5 cut(s) 266, 700, 722, 1923, 2135
LweI GCATC 8 cut(s) 80, 139, 793, 1048, 1314, 1682, 2043, 2106
MaeII ACGT 1 cut(s) 1975
MaeIII GTNAC 4 cut(s) 342, 760, 1225, 2166
MalI GATC 7 cut(s) 30, 96, 405, 547, 671, 1053, 2265
MboI GATC 7 cut(s) 28, 94, 403, 545, 669, 1051, 2263
MfeI CAATTG 1 cut(s) 1461
MhlI GDGCHC 2 cut(s) 1368, 1711
MlyI GAGTC 3 cut(s) 782, 1004, 1760
MmeI TCCRAC 1 cut(s) 1325
Mph1103I ATGCAT 1 cut(s) 261
MroXI GAANNNNTTC 2 cut(s) 137, 1608
MslI CAYNNNNRTG 1 cut(s) 258
MspA1I CMGCKG 3 cut(s) 169, 609, 713
MspCI CTTAAG 1 cut(s) 1501
MspI CCGG 1 cut(s) 1286
MunI CAATTG 1 cut(s) 1461
Mva1269I GAATGC 2 cut(s) 54, 1205
MvnI CGCG 2 cut(s) 169, 2289
MwoI GCNNNNNNNGC 1 cut(s) 965
NdeII GATC 7 cut(s) 28, 94, 403, 545, 669, 1051, 2263
NlaIV GGNNCC 3 cut(s) 705, 785, 1955
NmuCI GTSAC 1 cut(s) 1225
NsiI ATGCAT 1 cut(s) 261
NspI RCATGY 3 cut(s) 259, 1217, 1320
PciI ACATGT 1 cut(s) 1213
PctI GAATGC 2 cut(s) 54, 1205
PdmI GAANNNNTTC 2 cut(s) 137, 1608
PfeI GAWTC 7 cut(s) 385, 870, 1162, 1438, 1547, 1760, 2194
PkrI GCNGC 5 cut(s) 281, 712, 715, 1913, 2150
PleI GAGTC 3 cut(s) 781, 1003, 1760
PpsI GAGTC 3 cut(s) 781, 1003, 1760
PpuMI RGGWCCY 1 cut(s) 703
PscI ACATGT 1 cut(s) 1213
PsiI TTATAA 1 cut(s) 125
Psp124BI GAGCTC 1 cut(s) 1368
Psp5II RGGWCCY 1 cut(s) 703
PspN4I GGNNCC 3 cut(s) 705, 785, 1955
PspPI GGNCC 1 cut(s) 703
PspPPI RGGWCCY 1 cut(s) 703
PstI CTGCAG 2 cut(s) 712, 718
PvuII CAGCTG 2 cut(s) 609, 713
RsaI GTAC 5 cut(s) 251, 785, 1458, 1929, 2277
RsaNI GTAC 5 cut(s) 250, 784, 1457, 1928, 2276
RseI CAYNNNNRTG 1 cut(s) 258
SacI GAGCTC 1 cut(s) 1368
SacII CCGCGG 1 cut(s) 170
SatI GCNGC 5 cut(s) 280, 711, 714, 1912, 2149
Sau3AI GATC 7 cut(s) 28, 94, 403, 545, 669, 1051, 2263
Sau96I GGNCC 1 cut(s) 703
SchI GAGTC 3 cut(s) 782, 1004, 1760
SduI GDGCHC 2 cut(s) 1368, 1711
SfaNI GCATC 8 cut(s) 80, 139, 793, 1048, 1314, 1682, 2043, 2106
SfcI CTRYAG 3 cut(s) 708, 714, 736
Sfr303I CCGCGG 1 cut(s) 170
SgrBI CCGCGG 1 cut(s) 170
SinI GGWCC 1 cut(s) 703
SmiMI CAYNNNNRTG 1 cut(s) 258
SmlI CTYRAG 3 cut(s) 59, 202, 1501
SmoI CTYRAG 3 cut(s) 59, 202, 1501
SsiI CCGC 6 cut(s) 167, 169, 518, 947, 1339, 2287
SspI AATATT 1 cut(s) 1720
SstI GAGCTC 1 cut(s) 1368
StyI CCWWGG 1 cut(s) 990
TaaI ACNGT 5 cut(s) 628, 1028, 1667, 1927, 2177
TaiI ACGT 1 cut(s) 1978
TaqI TCGA 6 cut(s) 268, 868, 886, 1111, 1165, 1660
TfiI GAWTC 7 cut(s) 385, 870, 1162, 1438, 1547, 1760, 2194
TscAI CASTG 3 cut(s) 589, 1236, 1672
TseFI GTSAC 1 cut(s) 1225
TseI GCWGC 5 cut(s) 279, 710, 713, 1911, 2148
Tsp45I GTSAC 1 cut(s) 1225
TspDTI ATGAA 9 cut(s) 146, 235, 512, 923, 1868, 1895, 2132, 2168, 2243
TspGWI ACGGA 3 cut(s) 188, 516, 1019
TspRI CASTG 3 cut(s) 589, 1236, 1672
Vha464I CTTAAG 1 cut(s) 1501
VpaK11BI GGWCC 1 cut(s) 703
XapI RAATTY 4 cut(s) 724, 1682, 2183, 2301
XbaI TCTAGA 4 cut(s) 776, 1441, 1982, 2197
XceI RCATGY 3 cut(s) 259, 1217, 1320
XmiI GTMKAC 1 cut(s) 1972
XmnI GAANNNNTTC 2 cut(s) 137, 1608
Zsp2I ATGCAT 1 cut(s) 261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.