Prupe.6G201100_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000110
Physical Location & Seq
Forward (+)
20909225 .. 20912486
3262 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G201100.1

Sequence Viewer

Length: 2724 bp
ATGGCGAAAGCTTCAGTAGACATCTTCATTGGTAAATTTGTAGCCATCCTCGAAAGTGAAGCAGCCTCTATAGCGGGTGTTCATGATCAAGTTGATGAGATTAAGCAGGAGCTGGTATTCATGAAATCCTTCTTAGCGGATGCTGACGAGGGCAACAAAGTAGACACACAAGTAGACGAAGCGTGGATTGGAAGCATTCGAGACTTGGCCAATGACGTTGAAAACATCATTGATGAATTCATGTATCACATATACGTTCAACATAGAGGCCGTCGATTTGCAAGGTGGCTCCGCAAAACCATTCACTTCCCCAAGAACCTTTGGTATAAGCGTCAAATAGCCAATAAGTTACAAAAAATTGCTGTAAGGATTAGAGCTATTCATGAGAGAAATCTGAGATATGGTGGCCGTGCAGCTGTAGAAGGAAAAAGTACTTCTGAGGATATTCGCAGATGGGTACAGACCCAAGCGGAGTCTTCTCTTTACCAAAAGGAGGATGAACTCGTCGGGATTGAAGGCGATAAGAACATGTTAATGGGATGGCTGATGAACAAAGAGGAACACCAAATTGTTGTGTCCGTGGTTGGGATGGGAGGATCAGGGAAGACAACTCTAGTTGCAAGGACTTTCACCAATCATGTTGTGAAGAGCCATTTCGAGTGTTATGCGTGGATTACTGTTTCCCAATCTTATGTGCTTGAAGACTTGCTTATAAGATTGATGACAGAATTCCACAAAGCGAGGAAGGAAGAGGTCCCTACAAACATGAATTCCATGAGCCGTCACGAATTGCTAGAGATTTTAGTGAACTACTTGGAGACTAAAAGGTACCTAGTTGTATTGGATGACGTGTGGGATATCCATCTCTGGGAGAAAATAAGGTTTTCATTTCCAGATACACAACTTGGAAGTCGAATCATGATTACAACTAGAAGAGAAGACATAGCATCCTCTTCTTTTCAAGTTGAAAGCCATGTTCACAAGATTCGACCGCTGGAAAGGAGTGATGCTTGGGTGCTCTTCAGCAAGAAAGCATTCTCAAGTTACCCTAACAAATCTTGTTCACCTGAACTTCTGCCATTAGCTCAGGAACTTGTGGAAAGGTGCGGAGGCCTACCTCTTGCAATCGTAGCCTTGAGTGGTCTTATGTCTTCTAAGAAGTCACTTACAGAGTGGAGTACAGTCTACAACACCTTAAATTGGCATTTAACAAACAATCCTTTGCTAGAACCTATGAAGAGCGTCTTGTTGTTTAGTTATAATGATTTGCCATACCGACTGAAACAATGCTTTCTATATTGTTCCCTTTTCCCCGAAGATACAGTGATCTTAAATATGAGGATCACTAGACTGTGGATCGCTGAAGGATTTGTTGAACATGTCAAAGGGCTAACACCAGAAGAAGTTGCAAACAGCTATGTTATGGAACTCATTTTTCGTAATATGCTACAGGAAAGGTATCAAGAACACAACCATGCATGTAAGATGCATGATGTTATGCTGGAGATTGCTTTGTCAATAGCAGAAAAAGAAAAGTTTTGTTCCGTACATGAAGGGAGTGAAACAATGGAAGAAACTGGGGCCCTGCGTTTGTCAATTCAAACTACTAATGGAGAAATTGGATATTCATGCACAGGATTGTCACGGCTTCGTTCTTTTCTTGTGTTTGCAACTGGCGCATCCTCGTTCTCTTTCTCAAAGACATTGCTTTTTGACCTTACATTGTTGAGGGTTCTAGATTTGGAGGATGTCCCAATAGATAATCTGCCAGACGAAGTAACGTACTTATTCAATTTAAAATATTTAAATTTGAGAGGTACTCCAATTAAGGAGCTTCCAGAATCCATAGGACAGCTCCGCAACCTTCAGACCTTGAACATCATGGACACAAACATAGAGGCACTTCCAAGAGGGATTTCCAAGTTGCTGAACTTGCGACATCTAGTTATGAGCCATTACCAAAATCTTTCCCAGGTAATTGGAGTAAAAATACCATCAAGTATTAGTAAGATGAAGAAATTGCAGTATTTGGGATGTATTAAATCCGAAGGAAATATCATTAGACTTATTGGAAATATGACCCAGCTTAAGGCCCTTGGCATTACAAATGTGAAAGAAAGAGACGAGGAGGACCTATGTGCCTCAATTCAAGAGATGAAGGTCCTTTCCAAGTTGGGTTTATGGGTAGCAGATGGAGAGGACTTCCTTCGAGTTGACGCATTGTCTTCACCTCCTCCCTTCCTTGATACACTTACCTTGAGCGGCAAATTGGAAAAGGTACCACATTGGGTTTGTTCACTCCACTCTCTCATATATTTGCGTATGGGTGGGTCTAGACTTGAAGAAGAGGTACTACCTCATATCGAAGCATTGCCTTCTCTACGTTTGCTTTGCCTTGATAATTCCTACGTTGGGAAAGAGTTATGTTTCAGCAGTGGCTTTGTGAAGCTTACGTATATGGCGTTGGTTAATTTCTCATTATTAAATAAGATAACCATTGAGGAAGGGGTGATGCCAAATCTTGACTTCTTAATTATCAATACGTGCTTGAGCTTAGAGAGACTGCCACTGGGTATTGAGCACCTTACTAAACTAGAAGGATACACATTCGAGAGTGTTTCAGAGCAATTTACAGAGTCCATACGAGAAGGAGGTGTGGATCATGCAAGGATGCTACTCGTTGACGAGAGATGTAAGAAATATGCAAAGAAGTCCTACTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

908

Amino Acids

103.7

Weight (kDa)

6.16

Isoelectric Point (pI)

46.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 713, 1260
Acc65I GGTACC 2 cut(s) 828, 2278
AccB1I GGYRCC 2 cut(s) 828, 2278
AccBSI CCGCTC 1 cut(s) 2262
AccI GTMKAC 4 cut(s) 18, 162, 174, 1185
AciI CCGC 8 cut(s) 74, 137, 292, 470, 992, 1107, 1858, 2262
AclWI GGATC 4 cut(s) 604, 1349, 1364, 2667
AcoI YGGCCR 2 cut(s) 207, 406
AcsI RAATTY 5 cut(s) 35, 236, 728, 769, 1807
AcuI CTGAAG 3 cut(s) 1006, 1383, 1850
AfaI GTAC 9 cut(s) 433, 459, 830, 1180, 1548, 1784, 1819, 2280, 2352
AfiI CCNNNNNNNGG 6 cut(s) 493, 585, 868, 1200, 2089, 2412
AflII CTTAAG 1 cut(s) 2087
AflIII ACRYGT 3 cut(s) 528, 849, 1378
AhdI GACNNNNNGTC 1 cut(s) 2221
AjiI CACGTC 1 cut(s) 850
AjnI CCWGG 1 cut(s) 1971
AjuI GAANNNNNNNTTGG 4 cut(s) 171, 203, 1900, 1932
Alw21I GWGCWC 2 cut(s) 1020, 2583
Alw26I GTCTC 4 cut(s) 195, 812, 2115, 2554
AlwI GGATC 4 cut(s) 604, 1349, 1364, 2667
AlwNI CAGNNNCTG 1 cut(s) 112
AoxI GGCC 6 cut(s) 207, 268, 406, 1111, 1581, 2091
ApaI GGGCCC 1 cut(s) 1585
ApeKI GCWGC 2 cut(s) 62, 413
ApoI RAATTY 5 cut(s) 35, 236, 728, 769, 1807
Asp700I GAANNNNTTC 2 cut(s) 128, 1034
Asp718I GGTACC 2 cut(s) 828, 2278
AspLEI GCGC 1 cut(s) 1679
AspS9I GGNCC 6 cut(s) 754, 1581, 1582, 2092, 2131, 2161
AsuHPI GGTGA 4 cut(s) 622, 1056, 2220, 2521
AvaII GGWCC 3 cut(s) 754, 2131, 2161
BaeGI GKGCMC 1 cut(s) 1585
BalI TGGCCA 1 cut(s) 209
BanI GGYRCC 2 cut(s) 828, 2278
BanII GRGCYC 1 cut(s) 1585
BarI GAAGNNNNNNTAC 4 cut(s) 2334, 2337, 2366, 2369
BbsI GAAGAC 6 cut(s) 468, 611, 708, 945, 1143, 2217
Bbv12I GWGCWC 2 cut(s) 1020, 2583
BbvI GCAGC 2 cut(s) 74, 425
BccI CCATC 7 cut(s) 53, 447, 534, 583, 870, 2002, 2186
BceAI ACGGC 4 cut(s) 255, 393, 765, 1661
BcgI CGANNNNNNTGC 2 cut(s) 647, 681
BciT130I CCWGG 1 cut(s) 1973
BciVI GTATCC 1 cut(s) 2594
BclI TGATCA 1 cut(s) 85
BcoDI GTCTC 4 cut(s) 195, 812, 2115, 2554
BfmI CTRYAG 3 cut(s) 69, 417, 1448
BfrI CTTAAG 1 cut(s) 2087
BfuI GTATCC 1 cut(s) 2594
BisI GCNGC 3 cut(s) 63, 414, 2263
BlsI GCNGC 3 cut(s) 64, 415, 2264
BmcAI AGTACT 1 cut(s) 433
Bme1390I CCNGG 1 cut(s) 1973
Bme18I GGWCC 3 cut(s) 754, 2131, 2161
BmeRI GACNNNNNGTC 1 cut(s) 2221
BmgBI CACGTC 1 cut(s) 850
BmgT120I GGNCC 6 cut(s) 754, 1581, 1582, 2092, 2131, 2161
BmiI GGNNCC 6 cut(s) 290, 756, 830, 1582, 1583, 2280
BmrFI CCNGG 1 cut(s) 1973
BmrI ACTGGG 2 cut(s) 1587, 2579
BmsI GCATC 7 cut(s) 130, 956, 997, 1476, 1688, 2502, 2661
BmuI ACTGGG 2 cut(s) 1587, 2579
BpiI GAAGAC 6 cut(s) 468, 611, 708, 945, 1143, 2217
BplI GAGNNNNNCTC 2 cut(s) 1804, 1836
BpmI CTGGAG 1 cut(s) 1523
Bpu10I CCTNAGC 1 cut(s) 1086
BpuEI CTTGAG 4 cut(s) 1024, 1156, 2278, 2569
BsaAI YACGTR 2 cut(s) 2454, 2544
BsaBI GATNNNNATC 1 cut(s) 861
BsaJI CCNNGG 3 cut(s) 579, 1971, 2095
Bsc4I CCNNNNNNNGG 6 cut(s) 493, 585, 868, 1200, 2089, 2412
Bse1I ACTGG 3 cut(s) 1582, 1678, 2574
Bse3DI GCAATG 2 cut(s) 1703, 2369
Bse8I GATNNNNATC 1 cut(s) 861
BseBI CCWGG 1 cut(s) 1973
BseDI CCNNGG 3 cut(s) 579, 1971, 2095
BseJI GATNNNNATC 1 cut(s) 861
BseLI CCNNNNNNNGG 6 cut(s) 493, 585, 868, 1200, 2089, 2412
BseMI GCAATG 2 cut(s) 1703, 2369
BseMII CTCAG 3 cut(s) 386, 429, 1100
BseNI ACTGG 3 cut(s) 1582, 1678, 2574
BseRI GAGGAG 2 cut(s) 2141, 2223
BseSI GKGCMC 1 cut(s) 1585
BseXI GCAGC 2 cut(s) 74, 425
BseYI CCCAGC 1 cut(s) 2082
BsgI GTGCAG 1 cut(s) 432
Bsh1285I CGRYCG 1 cut(s) 992
BshFI GGCC 6 cut(s) 209, 270, 408, 1113, 1583, 2093
BshNI GGYRCC 2 cut(s) 828, 2278
BsiEI CGRYCG 1 cut(s) 992
BsiHKAI GWGCWC 2 cut(s) 1020, 2583
BslFI GGGAC 2 cut(s) 740, 1736
BslI CCNNNNNNNGG 6 cut(s) 493, 585, 868, 1200, 2089, 2412
BsmAI GTCTC 4 cut(s) 195, 812, 2115, 2554
BsmBI CGTCTC 1 cut(s) 2115
BsmFI GGGAC 2 cut(s) 740, 1736
BsmI GAATGC 2 cut(s) 195, 1034
BsnI GGCC 6 cut(s) 209, 270, 408, 1113, 1583, 2093
Bsp120I GGGCCC 1 cut(s) 1581
Bsp1286I GDGCHC 3 cut(s) 1020, 1585, 2583
Bsp143I GATC 6 cut(s) 85, 596, 1326, 1341, 1356, 2659
BspACI CCGC 8 cut(s) 74, 137, 292, 470, 992, 1107, 1858, 2262
BspANI GGCC 6 cut(s) 209, 270, 408, 1113, 1583, 2093
BspCNI CTCAG 3 cut(s) 387, 430, 1099
BspHI TCATGA 4 cut(s) 82, 120, 382, 918
BspLI GGNNCC 6 cut(s) 290, 756, 830, 1582, 1583, 2280
BspPI GGATC 4 cut(s) 604, 1349, 1364, 2667
BspQI GCTCTTC 3 cut(s) 641, 1025, 1232
BspT107I GGYRCC 2 cut(s) 828, 2278
BspTI CTTAAG 1 cut(s) 2087
BsrBI CCGCTC 1 cut(s) 2262
BsrDI GCAATG 2 cut(s) 1703, 2369
BsrI ACTGG 3 cut(s) 1582, 1678, 2574
BssECI CCNNGG 3 cut(s) 579, 1971, 2095
BssMI GATC 6 cut(s) 85, 596, 1326, 1341, 1356, 2659
BssT1I CCWWGG 1 cut(s) 2095
Bst2UI CCWGG 1 cut(s) 1973
Bst4CI ACNGT 4 cut(s) 679, 1183, 1324, 1353
Bst6I CTCTTC 7 cut(s) 641, 744, 928, 958, 1025, 1232, 2340
BstAFI CTTAAG 1 cut(s) 2087
BstBAI YACGTR 2 cut(s) 2454, 2544
BstDEI CTNAG 6 cut(s) 133, 395, 438, 1086, 1155, 2554
BstDSI CCRYGG 1 cut(s) 579
BstHHI GCGC 1 cut(s) 1679
BstKTI GATC 6 cut(s) 88, 599, 1329, 1344, 1359, 2662
BstMAI GTCTC 4 cut(s) 195, 812, 2115, 2554
BstMBI GATC 6 cut(s) 85, 596, 1326, 1341, 1356, 2659
BstMCI CGRYCG 1 cut(s) 992
BstMWI GCNNNNNNNGC 4 cut(s) 71, 1130, 1676, 1933
BstNI CCWGG 1 cut(s) 1973
BstNSI RCATGY 3 cut(s) 532, 1382, 1482
BstSCI CCNGG 1 cut(s) 1971
BstSFI CTRYAG 3 cut(s) 69, 417, 1448
BstSLI GKGCMC 1 cut(s) 1585
BstSNI TACGTA 1 cut(s) 2454
BstV1I GCAGC 2 cut(s) 74, 425
BstV2I GAAGAC 6 cut(s) 468, 611, 708, 945, 1143, 2217
BstXI CCANNNNNNTGG 1 cut(s) 1979
BsuI GTATCC 1 cut(s) 2594
BsuRI GGCC 6 cut(s) 209, 270, 408, 1113, 1583, 2093
BtgI CCRYGG 1 cut(s) 579
BtrI CACGTC 1 cut(s) 850
BtsI GCAGTG 1 cut(s) 2440
BtsIMutI CAGTG 3 cut(s) 1329, 2440, 2567
CaiI CAGNNNCTG 1 cut(s) 112
CciI TCATGA 4 cut(s) 82, 120, 382, 918
CfoI GCGC 1 cut(s) 1679
Cfr13I GGNCC 6 cut(s) 754, 1581, 1582, 2092, 2131, 2161
CseI GACGC 3 cut(s) 320, 1231, 2225
Csp6I GTAC 9 cut(s) 432, 458, 829, 1179, 1547, 1783, 1818, 2279, 2351
CviQI GTAC 9 cut(s) 432, 458, 829, 1179, 1547, 1783, 1818, 2279, 2351
DdeI CTNAG 6 cut(s) 133, 395, 438, 1086, 1155, 2554
DpnI GATC 6 cut(s) 87, 598, 1328, 1343, 1358, 2661
DpnII GATC 6 cut(s) 85, 596, 1326, 1341, 1356, 2659
DraI TTTAAA 2 cut(s) 1797, 1806
DriI GACNNNNNGTC 1 cut(s) 2221
EaeI YGGCCR 2 cut(s) 207, 406
Eam1104I CTCTTC 7 cut(s) 641, 744, 928, 958, 1025, 1232, 2340
Eam1105I GACNNNNNGTC 1 cut(s) 2221
EarI CTCTTC 7 cut(s) 641, 744, 928, 958, 1025, 1232, 2340
Eco105I TACGTA 1 cut(s) 2454
Eco130I CCWWGG 1 cut(s) 2095
Eco147I AGGCCT 1 cut(s) 1113
Eco24I GRGCYC 1 cut(s) 1585
Eco32I GATATC 1 cut(s) 859
Eco47I GGWCC 3 cut(s) 754, 2131, 2161
Eco57I CTGAAG 3 cut(s) 1006, 1383, 1850
EcoO109I RGGNCCY 6 cut(s) 754, 1581, 1582, 2092, 2131, 2161
EcoRI GAATTC 3 cut(s) 236, 728, 769
EcoRII CCWGG 1 cut(s) 1971
EcoRV GATATC 1 cut(s) 859
EcoT14I CCWWGG 1 cut(s) 2095
EcoT22I ATGCAT 2 cut(s) 1480, 1491
EcoT38I GRGCYC 1 cut(s) 1585
ErhI CCWWGG 1 cut(s) 2095
Esp3I CGTCTC 1 cut(s) 2115
FalI AAGNNNNNCTT 4 cut(s) 693, 725, 1229, 1261
FaqI GGGAC 2 cut(s) 740, 1736
FauI CCCGC 1 cut(s) 67
FbaI TGATCA 1 cut(s) 85
FblI GTMKAC 4 cut(s) 18, 162, 174, 1185
Fnu4HI GCNGC 3 cut(s) 63, 414, 2263
FriOI GRGCYC 1 cut(s) 1585
Fsp4HI GCNGC 3 cut(s) 63, 414, 2263
GlaI GCGC 1 cut(s) 1678
GluI GCNGC 3 cut(s) 63, 414, 2263
GsaI CCCAGC 1 cut(s) 2086
GsuI CTGGAG 1 cut(s) 1523
HaeIII GGCC 6 cut(s) 209, 270, 408, 1113, 1583, 2093
HgaI GACGC 3 cut(s) 320, 1231, 2225
HhaI GCGC 1 cut(s) 1679
Hin6I GCGC 1 cut(s) 1677
HinP1I GCGC 1 cut(s) 1677
HincII GTYRAC 2 cut(s) 2215, 2683
HindII GTYRAC 2 cut(s) 2215, 2683
HindIII AAGCTT 2 cut(s) 9, 2447
HinfI GANTC 5 cut(s) 473, 915, 985, 1841, 2636
HphI GGTGA 4 cut(s) 622, 1056, 2220, 2521
Hpy188I TCNGA 5 cut(s) 396, 439, 1869, 2047, 2623
Hpy99I CGWCG 2 cut(s) 276, 509
HpyCH4III ACNGT 4 cut(s) 679, 1183, 1324, 1353
HpyCH4IV ACGT 8 cut(s) 216, 255, 849, 1781, 2383, 2409, 2453, 2543
HpyF10VI GCNNNNNNNGC 4 cut(s) 71, 1130, 1676, 1933
HpyF3I CTNAG 6 cut(s) 133, 395, 438, 1086, 1155, 2554
HpySE526I ACGT 8 cut(s) 216, 255, 849, 1781, 2383, 2409, 2453, 2543
HspAI GCGC 1 cut(s) 1677
KpnI GGTACC 2 cut(s) 832, 2282
Ksp22I TGATCA 1 cut(s) 85
Kzo9I GATC 6 cut(s) 85, 596, 1326, 1341, 1356, 2659
LguI GCTCTTC 3 cut(s) 641, 1025, 1232
LmnI GCTCC 4 cut(s) 109, 294, 1831, 1860
Lsp1109I GCAGC 2 cut(s) 74, 425
LweI GCATC 7 cut(s) 130, 956, 997, 1476, 1688, 2502, 2661
MaeII ACGT 8 cut(s) 216, 255, 849, 1781, 2383, 2409, 2453, 2543
MaeIII GTNAC 6 cut(s) 348, 782, 1043, 1161, 1641, 1777
MalI GATC 6 cut(s) 87, 598, 1328, 1343, 1358, 2661
MbiI CCGCTC 1 cut(s) 2262
MboI GATC 6 cut(s) 85, 596, 1326, 1341, 1356, 2659
MhlI GDGCHC 3 cut(s) 1020, 1585, 2583
MlsI TGGCCA 1 cut(s) 209
MluNI TGGCCA 1 cut(s) 209
MlyI GAGTC 2 cut(s) 482, 2645
Mox20I TGGCCA 1 cut(s) 209
Mph1103I ATGCAT 2 cut(s) 1480, 1491
MroXI GAANNNNTTC 2 cut(s) 128, 1034
MscI TGGCCA 1 cut(s) 209
MslI CAYNNNNRTG 2 cut(s) 533, 1473
Msp20I TGGCCA 1 cut(s) 209
MspA1I CMGCKG 2 cut(s) 416, 994
MspCI CTTAAG 1 cut(s) 2087
MspR9I CCNGG 1 cut(s) 1973
Mva1269I GAATGC 2 cut(s) 195, 1034
MvaI CCWGG 1 cut(s) 1973
MwoI GCNNNNNNNGC 4 cut(s) 71, 1130, 1676, 1933
NdeII GATC 6 cut(s) 85, 596, 1326, 1341, 1356, 2659
NlaIV GGNNCC 6 cut(s) 290, 756, 830, 1582, 1583, 2280
NmuCI GTSAC 3 cut(s) 782, 1161, 1641
NsiI ATGCAT 2 cut(s) 1480, 1491
NspI RCATGY 3 cut(s) 532, 1382, 1482
PagI TCATGA 4 cut(s) 82, 120, 382, 918
PceI AGGCCT 1 cut(s) 1113
PciI ACATGT 2 cut(s) 528, 1378
PciSI GCTCTTC 3 cut(s) 641, 1025, 1232
PcsI WCGNNNNNNNCGW 1 cut(s) 2459
PctI GAATGC 2 cut(s) 195, 1034
PdmI GAANNNNTTC 2 cut(s) 128, 1034
PfeI GAWTC 3 cut(s) 915, 985, 1841
PkrI GCNGC 3 cut(s) 64, 415, 2264
PleI GAGTC 2 cut(s) 481, 2644
PpsI GAGTC 2 cut(s) 481, 2644
Ppu21I YACGTR 2 cut(s) 2454, 2544
PpuMI RGGWCCY 3 cut(s) 754, 2131, 2161
PscI ACATGT 2 cut(s) 528, 1378
PsiI TTATAA 2 cut(s) 713, 1260
Psp5II RGGWCCY 3 cut(s) 754, 2131, 2161
Psp6I CCWGG 1 cut(s) 1971
PspFI CCCAGC 1 cut(s) 2082
PspGI CCWGG 1 cut(s) 1971
PspN4I GGNNCC 6 cut(s) 290, 756, 830, 1582, 1583, 2280
PspOMI GGGCCC 1 cut(s) 1581
PspPI GGNCC 6 cut(s) 754, 1581, 1582, 2092, 2131, 2161
PspPPI RGGWCCY 3 cut(s) 754, 2131, 2161
PstNI CAGNNNCTG 1 cut(s) 112
PvuII CAGCTG 1 cut(s) 416
RsaI GTAC 9 cut(s) 433, 459, 830, 1180, 1548, 1784, 1819, 2280, 2352
RsaNI GTAC 9 cut(s) 432, 458, 829, 1179, 1547, 1783, 1818, 2279, 2351
RseI CAYNNNNRTG 2 cut(s) 533, 1473
SapI GCTCTTC 3 cut(s) 641, 1025, 1232
SatI GCNGC 3 cut(s) 63, 414, 2263
Sau3AI GATC 6 cut(s) 85, 596, 1326, 1341, 1356, 2659
Sau96I GGNCC 6 cut(s) 754, 1581, 1582, 2092, 2131, 2161
ScaI AGTACT 1 cut(s) 433
SchI GAGTC 2 cut(s) 482, 2645
ScrFI CCNGG 1 cut(s) 1973
SduI GDGCHC 3 cut(s) 1020, 1585, 2583
SfaNI GCATC 7 cut(s) 130, 956, 997, 1476, 1688, 2502, 2661
SfcI CTRYAG 3 cut(s) 69, 417, 1448
SinI GGWCC 3 cut(s) 754, 2131, 2161
SmiI ATTTAAAT 1 cut(s) 1806
SmiMI CAYNNNNRTG 2 cut(s) 533, 1473
SmlI CTYRAG 5 cut(s) 1039, 1135, 2087, 2257, 2548
SmoI CTYRAG 5 cut(s) 1039, 1135, 2087, 2257, 2548
SnaBI TACGTA 1 cut(s) 2454
SseBI AGGCCT 1 cut(s) 1113
SsiI CCGC 8 cut(s) 74, 137, 292, 470, 992, 1107, 1858, 2262
SspI AATATT 1 cut(s) 1802
StuI AGGCCT 1 cut(s) 1113
StyD4I CCNGG 1 cut(s) 1971
StyI CCWWGG 1 cut(s) 2095
SwaI ATTTAAAT 1 cut(s) 1806
TaaI ACNGT 4 cut(s) 679, 1183, 1324, 1353
TaiI ACGT 8 cut(s) 219, 258, 852, 1784, 2386, 2412, 2456, 2546
TaqI TCGA 9 cut(s) 51, 199, 274, 657, 913, 988, 2209, 2364, 2610
TatI WGTACW 2 cut(s) 431, 1178
TauI GCSGC 1 cut(s) 2265
TfiI GAWTC 3 cut(s) 915, 985, 1841
TscAI CASTG 3 cut(s) 1329, 2440, 2574
TseFI GTSAC 3 cut(s) 782, 1161, 1641
TseI GCWGC 2 cut(s) 62, 413
Tsp45I GTSAC 3 cut(s) 782, 1161, 1641
TspGWI ACGGA 2 cut(s) 568, 1534
TspRI CASTG 3 cut(s) 1329, 2440, 2574
Vha464I CTTAAG 1 cut(s) 2087
VpaK11BI GGWCC 3 cut(s) 754, 2131, 2161
XapI RAATTY 5 cut(s) 35, 236, 728, 769, 1807
XbaI TCTAGA 2 cut(s) 1735, 2333
XceI RCATGY 3 cut(s) 532, 1382, 1482
XmiI GTMKAC 4 cut(s) 18, 162, 174, 1185
XmnI GAANNNNTTC 2 cut(s) 128, 1034
ZrmI AGTACT 1 cut(s) 433
Zsp2I ATGCAT 2 cut(s) 1480, 1491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.