Rmu_sc0010265.1_g000015

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010265.1
OG0000110
Physical Location & Seq
Reverse (-)
64262 .. 66277
2016 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010265.1_g000015.1.cds

Sequence Viewer

Length: 2016 bp
atgagccgcatagaattgctagagttactagttaactacttggagtccaaaacatacctagttgttctagatgacgtgtgggagttaagagattggagagaaataaaggtatcacttcaagatagacaacttggaagtcgagtcgtacttacaactcgaaatgaagaagcagcatccaactcttttggagttgaaagctatgtttaccgtattcagcccctgcaaaagaatgaggcttgggagctcttcagcaggaaagcattctcaattaagcaacacaaaacttgtccaactgagctgaagtcattagcttgccagcttgtggagaagtgtgaaggccttcctctcggtattgtggctttaggtggtcttatgagttctaagaagtcgctggatcaatggcaacaagtctgcaacaacttgaattggtatctacataacaattcattgctagaccctgtgagaaacattttgttgctgagtttcaatgatttgccatctcaactgaagcattgcttcctctattgttccctttttccagaagattatctatttaaaagaaaaaggctgattagattgtggatagcagaaggatttgttgaaaatgtgaaaggggtcacacccgaagaagttgcagatgcctatctttgggaactctactcccgtagcatgttacaagttgcaaatgggtttgtttccggagcacctttgggaaggccgaaaaaatttaagatgcatgatctgatgcgagagcttgctttgtcgacagccgaaaaagaaaagtttggttatgtatacgacgggagagaagtaacggaagagatctcaacccgtcgcttgtcaattcacagaatgaaaggagaaattaaatcatggagggatatgtcaaagattcgttctcttcttgtatttgacactgacatgttctcattgtctttcttaaatacactggtttctcgattcaaattgttgaggactctagacttggaggacgtccaaattgataaactgcccgttgcagttttctactcgttcaacttgagatatttaaacttgaggggcactttaatcgaggaacttccagagtccataaggcatctccgcaaccttcaatttctgaacatcaggaatactaagatagagtcacttccacaaggaattacgaggttgctgaatctgcgcaatctaaatacgtttcgctacattgggaacctgtacttcaaagttgggtccttcaaagttgggagtgggacaaaagtgccatcaaatatttgtaagttgcagaaattgcaaagtatatcattgattgaatcagaaggggacactagtagactcctcgcgatcggtaacatgactcaacttaggagcatcagcatatcgaatctgaaagaaagagatgagattgacctttgggtctcaattcaaaagttgactctgcttcaatctatgggtttaatggctagtaatgaagaggaaattcttccggtgaaagcagaatgtccacctcttccgcaccttcgaaagcttgctttggctgggagactgcaaaatgtaataccttggttttcttcactgcatagcctcacaactctgattctgcattggtcaagacttgaagaggatttactacctcaaattgaagcactgctcaatctaacaaggcttaatctttgtaatgcatatgttggggaagagttgtgtttccgcaggggctttgtaaagctgatgagcttggagttgttgaattttgcctcggtgaaaaagataactatagaaaaaggggtgatgccaaatctccagtacttatgggttaacggcttcatggagttgaaaacagtgccattgggccttgaatacctttctactctacaatatttgggcctaaaagatgttcccatggaagttataaagcctattcggaaaggaggtgtggatcgctataaggtacaacacattcctgagatcatacatgtttacgaacagtcatctaagtgggtccacgaaaacttggcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

671

Amino Acids

77.55

Weight (kDa)

8.95

Isoelectric Point (pI)

51.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1907
AasI GACNNNNNNGTC 1 cut(s) 1412
AatII GACGTC 1 cut(s) 996
Acc16I TGCGCA 1 cut(s) 1181
AccB7I CCANNNNNTGG 1 cut(s) 322
AccI GTMKAC 3 cut(s) 764, 795, 1330
AccII CGCG 1 cut(s) 1340
AccIII TCCGGA 1 cut(s) 698
AciI CCGC 4 cut(s) 7, 1102, 1511, 1705
AclWI GGATC 2 cut(s) 402, 1941
AcsI RAATTY 3 cut(s) 725, 1476, 1744
AcuI CTGAAG 3 cut(s) 232, 320, 527
AcyI GRCGYC 1 cut(s) 993
AfaI GTAC 4 cut(s) 147, 1217, 1802, 1947
AfiI CCNNNNNNNGG 2 cut(s) 322, 648
AflIII ACRYGT 3 cut(s) 75, 921, 1969
AhlI ACTAGT 2 cut(s) 28, 1325
AjiI CACGTC 1 cut(s) 76
AluBI AGCT 9 cut(s) 198, 244, 298, 311, 319, 754, 1525, 1723, 1731
AluI AGCT 9 cut(s) 198, 244, 298, 311, 319, 754, 1525, 1723, 1731
Alw21I GWGCWC 2 cut(s) 246, 706
Alw26I GTCTC 2 cut(s) 1420, 1534
AlwI GGATC 2 cut(s) 402, 1941
AlwNI CAGNNNCTG 1 cut(s) 220
Aor13HI TCCGGA 1 cut(s) 698
AoxI GGCC 5 cut(s) 337, 716, 1846, 1879, 2010
ApeKI GCWGC 1 cut(s) 170
ApoI RAATTY 3 cut(s) 725, 1476, 1744
Asp700I GAANNNNTTC 3 cut(s) 260, 339, 1479
AspLEI GCGC 1 cut(s) 1182
AspS9I GGNCC 4 cut(s) 1230, 1846, 1879, 1996
AsuHPI GGTGA 3 cut(s) 1498, 1768, 1795
AsuII TTCGAA 1 cut(s) 1519
AvaII GGWCC 2 cut(s) 1230, 1996
BaeGI GKGCMC 1 cut(s) 1064
BanII GRGCYC 1 cut(s) 246
BarI GAAGNNNNNNTAC 2 cut(s) 1608, 1640
Bbv12I GWGCWC 2 cut(s) 246, 706
BbvI GCAGC 1 cut(s) 182
BccI CCATC 2 cut(s) 505, 1270
BceAI ACGGC 1 cut(s) 1831
BcgI CGANNNNNNTGC 4 cut(s) 614, 648, 1051, 1085
BcoDI GTCTC 2 cut(s) 1420, 1534
BcuI ACTAGT 2 cut(s) 28, 1325
BfaI CTAG 9 cut(s) 20, 29, 59, 68, 452, 980, 1326, 1461, 2014
BfmI CTRYAG 1 cut(s) 1770
BglII AGATCT 1 cut(s) 822
BisI GCNGC 2 cut(s) 7, 171
BlsI GCNGC 2 cut(s) 8, 172
BmcAI AGTACT 1 cut(s) 1802
Bme18I GGWCC 2 cut(s) 1230, 1996
BmgBI CACGTC 1 cut(s) 76
BmgT120I GGNCC 4 cut(s) 1230, 1846, 1879, 1996
BmiI GGNNCC 3 cut(s) 1211, 1231, 1997
BmsI GCATC 7 cut(s) 182, 628, 723, 735, 1105, 1377, 1776
BpmI CTGGAG 1 cut(s) 1781
Bpu14I TTCGAA 1 cut(s) 1519
BpuEI CTTGAG 2 cut(s) 1060, 1075
BsaBI GATNNNNATC 1 cut(s) 642
BsaHI GRCGYC 1 cut(s) 993
BsaI GGTCTC 1 cut(s) 1420
BsaJI CCNNGG 3 cut(s) 1559, 1752, 1896
BsaWI WCCGGW 2 cut(s) 698, 1483
Bsc4I CCNNNNNNNGG 2 cut(s) 322, 648
Bse1I ACTGG 2 cut(s) 954, 1798
Bse3DI GCAATG 2 cut(s) 446, 511
Bse8I GATNNNNATC 1 cut(s) 642
BseAI TCCGGA 1 cut(s) 698
BseDI CCNNGG 3 cut(s) 1559, 1752, 1896
BseGI GGATG 1 cut(s) 173
BseJI GATNNNNATC 1 cut(s) 642
BseLI CCNNNNNNNGG 2 cut(s) 322, 648
BseMI GCAATG 2 cut(s) 446, 511
BseMII CTCAG 3 cut(s) 285, 470, 1950
BseNI ACTGG 2 cut(s) 954, 1798
BseRI GAGGAG 1 cut(s) 1325
BseSI GKGCMC 1 cut(s) 1064
BseXI GCAGC 1 cut(s) 182
BseYI CCCAGC 1 cut(s) 1535
Bsh1236I CGCG 1 cut(s) 1340
Bsh1285I CGRYCG 1 cut(s) 1344
BshFI GGCC 5 cut(s) 339, 718, 1848, 1881, 2012
BsiEI CGRYCG 1 cut(s) 1344
BsiHKAI GWGCWC 2 cut(s) 246, 706
BsiSI CCGG 2 cut(s) 699, 1484
BslFI GGGAC 2 cut(s) 1264, 1334
BslI CCNNNNNNNGG 2 cut(s) 322, 648
BsmAI GTCTC 2 cut(s) 1420, 1534
BsmFI GGGAC 2 cut(s) 1264, 1334
BsmI GAATGC 1 cut(s) 260
BsnI GGCC 5 cut(s) 339, 718, 1848, 1881, 2012
Bso31I GGTCTC 1 cut(s) 1420
Bsp119I TTCGAA 1 cut(s) 1519
Bsp1286I GDGCHC 3 cut(s) 246, 706, 1064
Bsp13I TCCGGA 1 cut(s) 698
Bsp143I GATC 6 cut(s) 394, 739, 822, 1341, 1933, 1962
Bsp19I CCATGG 1 cut(s) 1896
Bsp68I TCGCGA 1 cut(s) 1340
BspACI CCGC 4 cut(s) 7, 1102, 1511, 1705
BspANI GGCC 5 cut(s) 339, 718, 1848, 1881, 2012
BspCNI CTCAG 3 cut(s) 286, 471, 1951
BspEI TCCGGA 1 cut(s) 698
BspFNI CGCG 1 cut(s) 1340
BspLI GGNNCC 3 cut(s) 1211, 1231, 1997
BspPI GGATC 2 cut(s) 402, 1941
BspQI GCTCTTC 1 cut(s) 251
BspT104I TTCGAA 1 cut(s) 1519
BspTNI GGTCTC 1 cut(s) 1420
BsrDI GCAATG 2 cut(s) 446, 511
BsrI ACTGG 2 cut(s) 954, 1798
BssECI CCNNGG 3 cut(s) 1559, 1752, 1896
BssMI GATC 6 cut(s) 394, 739, 822, 1341, 1933, 1962
BssNAI GTATAC 1 cut(s) 796
BssNI GRCGYC 1 cut(s) 993
BssT1I CCWWGG 2 cut(s) 1559, 1896
Bst1107I GTATAC 1 cut(s) 796
Bst4CI ACNGT 3 cut(s) 209, 1837, 1983
Bst6I CTCTTC 7 cut(s) 251, 813, 906, 1464, 1512, 1611, 1686
BstACI GRCGYC 1 cut(s) 993
BstAPI GCANNNNNTGC 1 cut(s) 1288
BstBI TTCGAA 1 cut(s) 1519
BstC8I GCNNGC 4 cut(s) 313, 317, 756, 1527
BstDEI CTNAG 7 cut(s) 294, 381, 479, 1134, 1361, 1959, 1989
BstDSI CCRYGG 1 cut(s) 1896
BstF5I GGATG 1 cut(s) 173
BstFNI CGCG 1 cut(s) 1340
BstHHI GCGC 1 cut(s) 1182
BstKTI GATC 6 cut(s) 397, 742, 825, 1344, 1936, 1965
BstMAI GTCTC 2 cut(s) 1420, 1534
BstMBI GATC 6 cut(s) 394, 739, 822, 1341, 1933, 1962
BstMCI CGRYCG 1 cut(s) 1344
BstMWI GCNNNNNNNGC 2 cut(s) 1177, 1288
BstNSI RCATGY 3 cut(s) 673, 925, 1973
BstSFI CTRYAG 1 cut(s) 1770
BstSLI GKGCMC 1 cut(s) 1064
BstUI CGCG 1 cut(s) 1340
BstV1I GCAGC 1 cut(s) 182
BstX2I RGATCY 1 cut(s) 822
BstYI RGATCY 1 cut(s) 822
BstZ17I GTATAC 1 cut(s) 796
BsuRI GGCC 5 cut(s) 339, 718, 1848, 1881, 2012
BtgI CCRYGG 1 cut(s) 1896
BtrI CACGTC 1 cut(s) 76
BtsCI GGATG 1 cut(s) 173
BtsI GCAGTG 2 cut(s) 1571, 1643
BtsIMutI CAGTG 5 cut(s) 915, 947, 1571, 1643, 1842
BtuMI TCGCGA 1 cut(s) 1340
Cac8I GCNNGC 4 cut(s) 313, 317, 756, 1527
CaiI CAGNNNCTG 1 cut(s) 220
CfoI GCGC 1 cut(s) 1182
Cfr13I GGNCC 4 cut(s) 1230, 1846, 1879, 1996
Csp6I GTAC 4 cut(s) 146, 1216, 1801, 1946
CviAII CATG 8 cut(s) 670, 737, 873, 922, 1351, 1822, 1897, 1970
CviQI GTAC 4 cut(s) 146, 1216, 1801, 1946
DdeI CTNAG 7 cut(s) 294, 381, 479, 1134, 1361, 1959, 1989
DpnI GATC 6 cut(s) 396, 741, 824, 1343, 1935, 1964
DpnII GATC 6 cut(s) 394, 739, 822, 1341, 1933, 1962
DraI TTTAAA 2 cut(s) 556, 1050
DrdI GACNNNNNNGTC 1 cut(s) 1412
DseDI GACNNNNNNGTC 1 cut(s) 1412
Eam1104I CTCTTC 7 cut(s) 251, 813, 906, 1464, 1512, 1611, 1686
EarI CTCTTC 7 cut(s) 251, 813, 906, 1464, 1512, 1611, 1686
Ecl136II GAGCTC 1 cut(s) 244
Eco130I CCWWGG 2 cut(s) 1559, 1896
Eco147I AGGCCT 1 cut(s) 339
Eco24I GRGCYC 1 cut(s) 246
Eco31I GGTCTC 1 cut(s) 1420
Eco47I GGWCC 2 cut(s) 1230, 1996
Eco53kI GAGCTC 1 cut(s) 244
Eco57I CTGAAG 3 cut(s) 232, 320, 527
EcoICRI GAGCTC 1 cut(s) 244
EcoO109I RGGNCCY 1 cut(s) 1230
EcoT14I CCWWGG 2 cut(s) 1559, 1896
EcoT22I ATGCAT 2 cut(s) 738, 1681
EcoT38I GRGCYC 1 cut(s) 246
ErhI CCWWGG 2 cut(s) 1559, 1896
FaeI CATG 8 cut(s) 673, 740, 876, 925, 1354, 1825, 1900, 1973
FalI AAGNNNNNCTT 2 cut(s) 500, 532
FaqI GGGAC 2 cut(s) 1264, 1334
FatI CATG 8 cut(s) 669, 736, 872, 921, 1350, 1821, 1896, 1969
FauNDI CATATG 1 cut(s) 1681
FblI GTMKAC 3 cut(s) 764, 795, 1330
Fnu4HI GCNGC 2 cut(s) 7, 171
FokI GGATG 1 cut(s) 160
FriOI GRGCYC 1 cut(s) 246
Fsp4HI GCNGC 2 cut(s) 7, 171
FspBI CTAG 9 cut(s) 20, 29, 59, 68, 452, 980, 1326, 1461, 2014
FspI TGCGCA 1 cut(s) 1181
GlaI GCGC 1 cut(s) 1181
GluI GCNGC 2 cut(s) 7, 171
GsaI CCCAGC 1 cut(s) 1539
GsuI CTGGAG 1 cut(s) 1781
HaeIII GGCC 5 cut(s) 339, 718, 1848, 1881, 2012
HapII CCGG 2 cut(s) 699, 1484
HhaI GCGC 1 cut(s) 1182
Hin1I GRCGYC 1 cut(s) 993
Hin1II CATG 8 cut(s) 673, 740, 876, 925, 1354, 1825, 1900, 1973
Hin6I GCGC 1 cut(s) 1180
HinP1I GCGC 1 cut(s) 1180
HincII GTYRAC 4 cut(s) 34, 765, 1431, 1813
HindII GTYRAC 4 cut(s) 34, 765, 1431, 1813
HindIII AAGCTT 1 cut(s) 1523
HpaI GTTAAC 2 cut(s) 34, 1813
HpaII CCGG 2 cut(s) 699, 1484
HphI GGTGA 3 cut(s) 1498, 1768, 1795
Hpy188I TCNGA 6 cut(s) 744, 1119, 1315, 1386, 1593, 1920
Hpy99I CGWCG 2 cut(s) 803, 837
HpyAV CCTTC 8 cut(s) 329, 350, 584, 708, 1118, 1243, 1310, 1526
HpyCH4III ACNGT 3 cut(s) 209, 1837, 1983
HpyCH4IV ACGT 3 cut(s) 75, 993, 1193
HpyF10VI GCNNNNNNNGC 2 cut(s) 1177, 1288
HpyF3I CTNAG 7 cut(s) 294, 381, 479, 1134, 1361, 1959, 1989
HpySE526I ACGT 3 cut(s) 75, 993, 1193
Hsp92I GRCGYC 1 cut(s) 993
Hsp92II CATG 8 cut(s) 673, 740, 876, 925, 1354, 1825, 1900, 1973
HspAI GCGC 1 cut(s) 1180
Kpn2I TCCGGA 1 cut(s) 698
KspAI GTTAAC 2 cut(s) 34, 1813
Kzo9I GATC 6 cut(s) 394, 739, 822, 1341, 1933, 1962
LguI GCTCTTC 1 cut(s) 251
LmnI GCTCC 3 cut(s) 241, 701, 1365
Lsp1109I GCAGC 1 cut(s) 182
LweI GCATC 7 cut(s) 182, 628, 723, 735, 1105, 1377, 1776
MaeI CTAG 9 cut(s) 20, 29, 59, 68, 452, 980, 1326, 1461, 2014
MaeII ACGT 3 cut(s) 75, 993, 1193
MaeIII GTNAC 6 cut(s) 24, 616, 672, 811, 1143, 1346
MalI GATC 6 cut(s) 396, 741, 824, 1343, 1935, 1964
MboI GATC 6 cut(s) 394, 739, 822, 1341, 1933, 1962
MflI RGATCY 1 cut(s) 822
MhlI GDGCHC 3 cut(s) 246, 706, 1064
MlyI GAGTC 8 cut(s) 53, 150, 970, 1094, 1151, 1326, 1348, 1426
MmeI TCCRAC 2 cut(s) 201, 314
Mph1103I ATGCAT 2 cut(s) 738, 1681
MroI TCCGGA 1 cut(s) 698
MroXI GAANNNNTTC 3 cut(s) 260, 339, 1479
MslI CAYNNNNRTG 2 cut(s) 920, 1990
MspI CCGG 2 cut(s) 699, 1484
Mva1269I GAATGC 1 cut(s) 260
MvnI CGCG 1 cut(s) 1340
MwoI GCNNNNNNNGC 2 cut(s) 1177, 1288
NcoI CCATGG 1 cut(s) 1896
NdeI CATATG 1 cut(s) 1681
NdeII GATC 6 cut(s) 394, 739, 822, 1341, 1933, 1962
NlaIII CATG 8 cut(s) 673, 740, 876, 925, 1354, 1825, 1900, 1973
NlaIV GGNNCC 3 cut(s) 1211, 1231, 1997
NmuCI GTSAC 2 cut(s) 616, 1143
NruI TCGCGA 1 cut(s) 1340
NsbI TGCGCA 1 cut(s) 1181
NsiI ATGCAT 2 cut(s) 738, 1681
NspI RCATGY 3 cut(s) 673, 925, 1973
NspV TTCGAA 1 cut(s) 1519
PceI AGGCCT 1 cut(s) 339
PciI ACATGT 2 cut(s) 921, 1969
PciSI GCTCTTC 1 cut(s) 251
PctI GAATGC 1 cut(s) 260
PdmI GAANNNNTTC 3 cut(s) 260, 339, 1479
PfeI GAWTC 6 cut(s) 892, 960, 1174, 1310, 1381, 1594
PflMI CCANNNNNTGG 1 cut(s) 322
PkrI GCNGC 2 cut(s) 8, 172
Ple19I CGATCG 1 cut(s) 1344
PleI GAGTC 8 cut(s) 52, 149, 970, 1093, 1150, 1326, 1348, 1426
PpsI GAGTC 8 cut(s) 52, 149, 970, 1093, 1150, 1326, 1348, 1426
PpuMI RGGWCCY 1 cut(s) 1230
PscI ACATGT 2 cut(s) 921, 1969
PsiI TTATAA 1 cut(s) 1907
Psp124BI GAGCTC 1 cut(s) 246
Psp5II RGGWCCY 1 cut(s) 1230
PspFI CCCAGC 1 cut(s) 1535
PspN4I GGNNCC 3 cut(s) 1211, 1231, 1997
PspPI GGNCC 4 cut(s) 1230, 1846, 1879, 1996
PspPPI RGGWCCY 1 cut(s) 1230
PstNI CAGNNNCTG 1 cut(s) 220
PsuI RGATCY 1 cut(s) 822
PvuI CGATCG 1 cut(s) 1344
RruI TCGCGA 1 cut(s) 1340
RsaI GTAC 4 cut(s) 147, 1217, 1802, 1947
RsaNI GTAC 4 cut(s) 146, 1216, 1801, 1946
RseI CAYNNNNRTG 2 cut(s) 920, 1990
SacI GAGCTC 1 cut(s) 246
SalI GTCGAC 1 cut(s) 763
SapI GCTCTTC 1 cut(s) 251
SatI GCNGC 2 cut(s) 7, 171
Sau3AI GATC 6 cut(s) 394, 739, 822, 1341, 1933, 1962
Sau96I GGNCC 4 cut(s) 1230, 1846, 1879, 1996
ScaI AGTACT 1 cut(s) 1802
SchI GAGTC 8 cut(s) 53, 150, 970, 1094, 1151, 1326, 1348, 1426
SduI GDGCHC 3 cut(s) 246, 706, 1064
SfaNI GCATC 7 cut(s) 182, 628, 723, 735, 1105, 1377, 1776
SfcI CTRYAG 1 cut(s) 1770
SfuI TTCGAA 1 cut(s) 1519
SinI GGWCC 2 cut(s) 1230, 1996
SmiMI CAYNNNNRTG 2 cut(s) 920, 1990
SmlI CTYRAG 2 cut(s) 1039, 1054
SmoI CTYRAG 2 cut(s) 1039, 1054
SpeI ACTAGT 2 cut(s) 28, 1325
SseBI AGGCCT 1 cut(s) 339
SsiI CCGC 4 cut(s) 7, 1102, 1511, 1705
SspI AATATT 2 cut(s) 1270, 1874
SspMI CTAG 9 cut(s) 20, 29, 59, 68, 452, 980, 1326, 1461, 2014
SstI GAGCTC 1 cut(s) 246
StuI AGGCCT 1 cut(s) 339
StyI CCWWGG 2 cut(s) 1559, 1896
TaaI ACNGT 3 cut(s) 209, 1837, 1983
TaiI ACGT 3 cut(s) 78, 996, 1196
TaqI TCGA 7 cut(s) 139, 157, 764, 958, 1071, 1379, 1519
TatI WGTACW 2 cut(s) 1215, 1800
TauI GCSGC 1 cut(s) 9
TfiI GAWTC 6 cut(s) 892, 960, 1174, 1310, 1381, 1594
TscAI CASTG 5 cut(s) 922, 954, 1578, 1650, 1842
TseFI GTSAC 2 cut(s) 616, 1143
TseI GCWGC 1 cut(s) 170
Tsp45I GTSAC 2 cut(s) 616, 1143
TspDTI ATGAA 5 cut(s) 177, 435, 869, 1482, 1810
TspGWI ACGGA 1 cut(s) 830
TspRI CASTG 5 cut(s) 922, 954, 1578, 1650, 1842
Van91I CCANNNNNTGG 1 cut(s) 322
VpaK11BI GGWCC 2 cut(s) 1230, 1996
XapI RAATTY 3 cut(s) 725, 1476, 1744
XbaI TCTAGA 2 cut(s) 67, 979
XceI RCATGY 3 cut(s) 673, 925, 1973
XmiI GTMKAC 3 cut(s) 764, 795, 1330
XmnI GAANNNNTTC 3 cut(s) 260, 339, 1479
XspI CTAG 9 cut(s) 20, 29, 59, 68, 452, 980, 1326, 1461, 2014
ZraI GACGTC 1 cut(s) 994
ZrmI AGTACT 1 cut(s) 1802
Zsp2I ATGCAT 2 cut(s) 738, 1681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.