Rorug02G0097500

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000110
Physical Location & Seq
Reverse (-)
8061244 .. 8064482
3239 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0097500.1

Sequence Viewer

Length: 1131 bp
ATGGCTATGAGATCGACACCCGCTCTTGTGGTCGTTGCGGCATTTCTGGCTCTCCATTTCGTGCCTTTGCTCGTGTCGGGCCACCCCAACCTCATTCCGGAAAACGAGTCTGATCTCGATGGCTGGATCGTCCAAAACATGAGGGAGTACAACGAGCGGAAGGCCGAACTGAGGACCAGGAGCGACGTCCCCGGCACGCACTTCGACACAGGGCTCGCCGCCGCCGAGGACGCAAAGAGAGTCATCCGGGTGAAGCAGGACGGCACCGGAGACTTTAGGACGGTGACGGACGCCGTGAGGAGCATTCCATCTGCAAACAAGCAGAGCGTGGTGGTGTGGATTGGCGGGGGAGAGTACAGGGAGAAGGTTCTGGTGGACGTGACGAAGCCGTACGTGACGTTTTTTGGGGACAAGAACAACATCCCGTCGATCACCTACGACGGCACGGCTGCCGTGTACGGGACGTGGAACAGTGCCACGGTGGCGGTGGAAGCCGACTATTTCATGGCCGTGAATATAGCGTTCGTGAATTCAGCTCCTATGCCAGACGGCATAAGGAAAGGTGCACAGGCGGTGGCAATGAGAATATCAGGGGATAAGGCAGCCTTCCACAACTGCAGGTTCATCGGATTTCAGGACACCTTATGTGACGATAGGGGAAGGCATGTCTTCAAGGATTGCTTCATCCAAGGCACTGTTGATTTCATCTTTGGCAATGGAAAATCCCTCTACTTGAAAAGTACCTTAAACTCAGTTGCGAATGGAAATGGAGTGATCACGGCACATGGTAGAACAGATGTGCAGGATGATAGCGGATTTTCGTTTGTGTATTGCAACATAACGGGGACAGGTGAGACCTTGCTTGGGCGTGCTTGGAGGGGAAGAGCAAGAGTGGTGTTTTCTTACACGTCCATGGGGAACCTTGTCGACAGAGAAGGGTGGTCCGACTACAACGACAGTGCGCGTGACAACACTGTGTATTATGGAGAATACAAATGTTCTGGACCGGGTTCAAGCTCCATCCATCGAGTCAAGTATGCAAGGATGCTGACTGATATAGAAGCAAAACCCTTCATCAGCCTGACTTTCATCCAAGGAACGAAATGGGTTCTTCCCCCTCCCAACCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

376

Amino Acids

41.35

Weight (kDa)

7.05

Isoelectric Point (pI)

23.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pectinesterase PF01095 83 - 366 1.4e-67 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 189
Acc36I ACCTGC 1 cut(s) 609
AccB1I GGYRCC 1 cut(s) 263
AccBSI CCGCTC 2 cut(s) 23, 157
AccI GTMKAC 1 cut(s) 927
AccII CGCG 1 cut(s) 964
AccIII TCCGGA 1 cut(s) 97
AciI CCGC 9 cut(s) 21, 38, 157, 219, 222, 345, 485, 572, 813
AclWI GGATC 1 cut(s) 134
AcoI YGGCCR 1 cut(s) 507
AcsI RAATTY 1 cut(s) 529
AcyI GRCGYC 2 cut(s) 186, 291
AfaI GTAC 5 cut(s) 149, 356, 392, 458, 742
AfiI CCNNNNNNNGG 4 cut(s) 97, 171, 459, 864
AflIII ACRYGT 1 cut(s) 906
AgsI TTSAA 3 cut(s) 673, 736, 1014
AjiI CACGTC 3 cut(s) 379, 465, 909
AjnI CCWGG 1 cut(s) 176
AluBI AGCT 2 cut(s) 536, 1017
AluI AGCT 2 cut(s) 536, 1017
Alw21I GWGCWC 1 cut(s) 568
Alw26I GTCTC 2 cut(s) 264, 848
Alw44I GTGCAC 1 cut(s) 564
AlwI GGATC 1 cut(s) 134
Aor13HI TCCGGA 1 cut(s) 97
AoxI GGCC 3 cut(s) 79, 162, 507
ApaLI GTGCAC 1 cut(s) 564
ApeKI GCWGC 2 cut(s) 449, 602
ApoI RAATTY 1 cut(s) 529
AspLEI GCGC 1 cut(s) 964
AspS9I GGNCC 4 cut(s) 79, 174, 942, 1004
AsuC2I CCSGG 3 cut(s) 192, 248, 1008
AsuHPI GGTGA 4 cut(s) 262, 295, 424, 863
AvaII GGWCC 3 cut(s) 174, 942, 1004
BaeGI GKGCMC 1 cut(s) 568
BanI GGYRCC 1 cut(s) 263
BanII GRGCYC 1 cut(s) 216
BauI CACGAG 1 cut(s) 71
BbsI GAAGAC 1 cut(s) 661
Bbv12I GWGCWC 1 cut(s) 568
BbvI GCAGC 2 cut(s) 436, 614
BccI CCATC 4 cut(s) 113, 316, 1028, 1032
BceAI ACGGC 9 cut(s) 277, 278, 373, 437, 457, 462, 494, 565, 795
BcgI CGANNNNNNTGC 4 cut(s) 184, 218, 607, 641
BciT130I CCWGG 1 cut(s) 178
BclI TGATCA 1 cut(s) 774
BcnI CCSGG 3 cut(s) 192, 248, 1008
BcoDI GTCTC 2 cut(s) 264, 848
BfaI CTAG 1 cut(s) 1129
BfmI CTRYAG 1 cut(s) 616
BfuAI ACCTGC 1 cut(s) 609
BglI GCCNNNNNGGC 1 cut(s) 482
BisI GCNGC 5 cut(s) 39, 219, 222, 450, 603
BlsI GCNGC 5 cut(s) 40, 220, 223, 451, 604
Bme1390I CCNGG 4 cut(s) 178, 192, 248, 1008
Bme18I GGWCC 3 cut(s) 174, 942, 1004
BmgBI CACGTC 3 cut(s) 379, 465, 909
BmgT120I GGNCC 4 cut(s) 79, 174, 942, 1004
BmiI GGNNCC 2 cut(s) 265, 920
BmrFI CCNGG 4 cut(s) 178, 192, 248, 1008
BmsI GCATC 1 cut(s) 1035
BpiI GAAGAC 1 cut(s) 661
BpuMI CCSGG 3 cut(s) 192, 248, 1008
BsaAI YACGTR 1 cut(s) 394
BsaHI GRCGYC 2 cut(s) 186, 291
BsaI GGTCTC 1 cut(s) 848
BsaJI CCNNGG 6 cut(s) 190, 225, 477, 688, 912, 1093
BsaWI WCCGGW 2 cut(s) 97, 266
Bsc4I CCNNNNNNNGG 4 cut(s) 97, 171, 459, 864
Bse3DI GCAATG 2 cut(s) 585, 721
BseAI TCCGGA 1 cut(s) 97
BseBI CCWGG 1 cut(s) 178
BseDI CCNNGG 6 cut(s) 190, 225, 477, 688, 912, 1093
BseGI GGATG 7 cut(s) 243, 420, 684, 811, 1020, 1050, 1089
BseLI CCNNNNNNNGG 4 cut(s) 97, 171, 459, 864
BseMI GCAATG 2 cut(s) 585, 721
BseMII CTCAG 2 cut(s) 161, 765
BseRI GAGGAG 1 cut(s) 313
BseSI GKGCMC 1 cut(s) 568
BseXI GCAGC 2 cut(s) 436, 614
BsgI GTGCAG 1 cut(s) 821
Bsh1236I CGCG 1 cut(s) 964
BshFI GGCC 3 cut(s) 81, 164, 509
BshNI GGYRCC 1 cut(s) 263
BsiHKAI GWGCWC 1 cut(s) 568
BsiSI CCGG 5 cut(s) 98, 192, 247, 267, 1007
BsiWI CGTACG 1 cut(s) 390
BslFI GGGAC 4 cut(s) 173, 422, 475, 859
BslI CCNNNNNNNGG 4 cut(s) 97, 171, 459, 864
BsmAI GTCTC 2 cut(s) 264, 848
BsmFI GGGAC 4 cut(s) 173, 422, 475, 859
BsmI GAATGC 1 cut(s) 303
BsnI GGCC 3 cut(s) 81, 164, 509
Bso31I GGTCTC 1 cut(s) 848
Bsp1286I GDGCHC 2 cut(s) 216, 568
Bsp13I TCCGGA 1 cut(s) 97
Bsp143I GATC 5 cut(s) 11, 112, 126, 429, 774
Bsp19I CCATGG 1 cut(s) 912
BspACI CCGC 9 cut(s) 21, 38, 157, 219, 222, 345, 485, 572, 813
BspANI GGCC 3 cut(s) 81, 164, 509
BspCNI CTCAG 2 cut(s) 162, 764
BspEI TCCGGA 1 cut(s) 97
BspFNI CGCG 1 cut(s) 964
BspLI GGNNCC 2 cut(s) 265, 920
BspMAI CTGCAG 1 cut(s) 620
BspMI ACCTGC 1 cut(s) 609
BspPI GGATC 1 cut(s) 134
BspQI GCTCTTC 1 cut(s) 877
BspT107I GGYRCC 1 cut(s) 263
BspTNI GGTCTC 1 cut(s) 848
BsrBI CCGCTC 2 cut(s) 23, 157
BsrDI GCAATG 2 cut(s) 585, 721
BssECI CCNNGG 6 cut(s) 190, 225, 477, 688, 912, 1093
BssMI GATC 5 cut(s) 11, 112, 126, 429, 774
BssNI GRCGYC 2 cut(s) 186, 291
BssSI CACGAG 1 cut(s) 71
BssT1I CCWWGG 3 cut(s) 688, 912, 1093
Bst2BI CACGAG 1 cut(s) 71
Bst2UI CCWGG 1 cut(s) 178
Bst4CI ACNGT 6 cut(s) 283, 473, 481, 697, 959, 976
Bst6I CTCTTC 1 cut(s) 877
BstACI GRCGYC 2 cut(s) 186, 291
BstBAI YACGTR 1 cut(s) 394
BstC8I GCNNGC 3 cut(s) 197, 216, 870
BstDEI CTNAG 2 cut(s) 170, 751
BstDSI CCRYGG 2 cut(s) 477, 912
BstF5I GGATG 7 cut(s) 243, 420, 684, 811, 1020, 1050, 1089
BstFNI CGCG 1 cut(s) 964
BstHHI GCGC 1 cut(s) 964
BstKTI GATC 5 cut(s) 14, 115, 129, 432, 777
BstMAI GTCTC 2 cut(s) 264, 848
BstMBI GATC 5 cut(s) 11, 112, 126, 429, 774
BstMWI GCNNNNNNNGC 4 cut(s) 47, 230, 482, 491
BstNI CCWGG 1 cut(s) 178
BstNSI RCATGY 1 cut(s) 668
BstSCI CCNGG 4 cut(s) 176, 190, 246, 1006
BstSFI CTRYAG 1 cut(s) 616
BstSLI GKGCMC 1 cut(s) 568
BstUI CGCG 1 cut(s) 964
BstV1I GCAGC 2 cut(s) 436, 614
BstV2I GAAGAC 1 cut(s) 661
BsuRI GGCC 3 cut(s) 81, 164, 509
BtgI CCRYGG 2 cut(s) 477, 912
BtrI CACGTC 3 cut(s) 379, 465, 909
BtsCI GGATG 7 cut(s) 243, 420, 684, 811, 1020, 1050, 1089
BtsIMutI CAGTG 4 cut(s) 478, 693, 964, 972
BveI ACCTGC 1 cut(s) 609
Cac8I GCNNGC 3 cut(s) 197, 216, 870
CfoI GCGC 1 cut(s) 964
Cfr13I GGNCC 4 cut(s) 79, 174, 942, 1004
CseI GACGC 2 cut(s) 239, 299
Csp6I GTAC 5 cut(s) 148, 355, 391, 457, 741
CviAII CATG 5 cut(s) 139, 505, 665, 785, 913
CviQI GTAC 5 cut(s) 148, 355, 391, 457, 741
DdeI CTNAG 2 cut(s) 170, 751
DpnI GATC 5 cut(s) 13, 114, 128, 431, 776
DpnII GATC 5 cut(s) 11, 112, 126, 429, 774
EaeI YGGCCR 1 cut(s) 507
Eam1104I CTCTTC 1 cut(s) 877
EarI CTCTTC 1 cut(s) 877
Eco130I CCWWGG 3 cut(s) 688, 912, 1093
Eco24I GRGCYC 1 cut(s) 216
Eco31I GGTCTC 1 cut(s) 848
Eco47I GGWCC 3 cut(s) 174, 942, 1004
EcoRI GAATTC 1 cut(s) 529
EcoRII CCWGG 1 cut(s) 176
EcoT14I CCWWGG 3 cut(s) 688, 912, 1093
EcoT38I GRGCYC 1 cut(s) 216
ErhI CCWWGG 3 cut(s) 688, 912, 1093
FaeI CATG 5 cut(s) 142, 508, 668, 788, 916
FalI AAGNNNNNCTT 4 cut(s) 590, 622, 665, 697
FaqI GGGAC 4 cut(s) 173, 422, 475, 859
FatI CATG 5 cut(s) 138, 504, 664, 784, 912
FauI CCCGC 2 cut(s) 28, 338
FbaI TGATCA 1 cut(s) 774
FblI GTMKAC 1 cut(s) 927
Fnu4HI GCNGC 5 cut(s) 39, 219, 222, 450, 603
FokI GGATG 7 cut(s) 230, 407, 671, 818, 1007, 1057, 1076
FriOI GRGCYC 1 cut(s) 216
Fsp4HI GCNGC 5 cut(s) 39, 219, 222, 450, 603
FspBI CTAG 1 cut(s) 1129
GlaI GCGC 1 cut(s) 963
GluI GCNGC 5 cut(s) 39, 219, 222, 450, 603
HaeIII GGCC 3 cut(s) 81, 164, 509
HapII CCGG 5 cut(s) 98, 192, 247, 267, 1007
HgaI GACGC 2 cut(s) 239, 299
HhaI GCGC 1 cut(s) 964
Hin1I GRCGYC 2 cut(s) 186, 291
Hin1II CATG 5 cut(s) 142, 508, 668, 788, 916
Hin6I GCGC 1 cut(s) 962
HinP1I GCGC 1 cut(s) 962
HincII GTYRAC 1 cut(s) 928
HindII GTYRAC 1 cut(s) 928
HinfI GANTC 3 cut(s) 107, 240, 1029
HpaII CCGG 5 cut(s) 98, 192, 247, 267, 1007
HphI GGTGA 4 cut(s) 262, 295, 424, 863
Hpy166II GTNNAC 4 cut(s) 376, 457, 566, 928
Hpy188I TCNGA 3 cut(s) 112, 629, 946
Hpy188III TCNNGA 5 cut(s) 98, 116, 526, 635, 1002
Hpy8I GTNNAC 4 cut(s) 376, 457, 566, 928
Hpy99I CGWCG 3 cut(s) 188, 430, 443
HpyAV CCTTC 6 cut(s) 154, 358, 616, 654, 929, 1081
HpyCH4III ACNGT 6 cut(s) 283, 473, 481, 697, 959, 976
HpyCH4IV ACGT 6 cut(s) 186, 378, 393, 398, 464, 908
HpyCH4V TGCA 6 cut(s) 314, 566, 618, 802, 834, 1040
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 230, 482, 491
HpyF3I CTNAG 2 cut(s) 170, 751
HpySE526I ACGT 6 cut(s) 186, 378, 393, 398, 464, 908
Hsp92I GRCGYC 2 cut(s) 186, 291
Hsp92II CATG 5 cut(s) 142, 508, 668, 788, 916
HspAI GCGC 1 cut(s) 962
Kpn2I TCCGGA 1 cut(s) 97
Ksp22I TGATCA 1 cut(s) 774
Kzo9I GATC 5 cut(s) 11, 112, 126, 429, 774
LguI GCTCTTC 1 cut(s) 877
LmnI GCTCC 4 cut(s) 180, 300, 541, 1022
Lsp1109I GCAGC 2 cut(s) 436, 614
LweI GCATC 1 cut(s) 1035
MaeI CTAG 1 cut(s) 1129
MaeII ACGT 6 cut(s) 186, 378, 393, 398, 464, 908
MaeIII GTNAC 5 cut(s) 283, 379, 394, 647, 965
MalI GATC 5 cut(s) 13, 114, 128, 431, 776
MbiI CCGCTC 2 cut(s) 23, 157
MboI GATC 5 cut(s) 11, 112, 126, 429, 774
MboII GAAGA 3 cut(s) 661, 894, 1103
MhlI GDGCHC 2 cut(s) 216, 568
MluCI AATT 1 cut(s) 529
MlyI GAGTC 3 cut(s) 116, 249, 1038
MmeI TCCRAC 1 cut(s) 969
MnlI CCTC 8 cut(s) 101, 135, 165, 220, 291, 737, 870, 1128
MroI TCCGGA 1 cut(s) 97
MseI TTAA 1 cut(s) 746
MslI CAYNNNNRTG 3 cut(s) 248, 509, 911
MspI CCGG 5 cut(s) 98, 192, 247, 267, 1007
MspR9I CCNGG 4 cut(s) 178, 192, 248, 1008
Mva1269I GAATGC 1 cut(s) 303
MvaI CCWGG 1 cut(s) 178
MvnI CGCG 1 cut(s) 964
MwoI GCNNNNNNNGC 4 cut(s) 47, 230, 482, 491
NciI CCSGG 3 cut(s) 192, 248, 1008
NcoI CCATGG 1 cut(s) 912
NdeII GATC 5 cut(s) 11, 112, 126, 429, 774
NlaIII CATG 5 cut(s) 142, 508, 668, 788, 916
NlaIV GGNNCC 2 cut(s) 265, 920
NmeAIII GCCGAG 1 cut(s) 250
NmuCI GTSAC 5 cut(s) 283, 379, 394, 647, 965
NspI RCATGY 1 cut(s) 668
PciSI GCTCTTC 1 cut(s) 877
PcsI WCGNNNNNNNCGW 1 cut(s) 222
PctI GAATGC 1 cut(s) 303
Pfl23II CGTACG 1 cut(s) 390
PkrI GCNGC 5 cut(s) 40, 220, 223, 451, 604
PleI GAGTC 3 cut(s) 115, 248, 1037
PpsI GAGTC 3 cut(s) 115, 248, 1037
Ppu21I YACGTR 1 cut(s) 394
Psp6I CCWGG 1 cut(s) 176
PspGI CCWGG 1 cut(s) 176
PspLI CGTACG 1 cut(s) 390
PspN4I GGNNCC 2 cut(s) 265, 920
PspPI GGNCC 4 cut(s) 79, 174, 942, 1004
PstI CTGCAG 1 cut(s) 620
RsaI GTAC 5 cut(s) 149, 356, 392, 458, 742
RsaNI GTAC 5 cut(s) 148, 355, 391, 457, 741
RseI CAYNNNNRTG 3 cut(s) 248, 509, 911
SalI GTCGAC 1 cut(s) 926
SapI GCTCTTC 1 cut(s) 877
SaqAI TTAA 1 cut(s) 746
SatI GCNGC 5 cut(s) 39, 219, 222, 450, 603
Sau3AI GATC 5 cut(s) 11, 112, 126, 429, 774
Sau96I GGNCC 4 cut(s) 79, 174, 942, 1004
SchI GAGTC 3 cut(s) 116, 249, 1038
ScrFI CCNGG 4 cut(s) 178, 192, 248, 1008
SduI GDGCHC 2 cut(s) 216, 568
SfaNI GCATC 1 cut(s) 1035
SfcI CTRYAG 1 cut(s) 616
SinI GGWCC 3 cut(s) 174, 942, 1004
SmiMI CAYNNNNRTG 3 cut(s) 248, 509, 911
Sse9I AATT 1 cut(s) 529
SsiI CCGC 9 cut(s) 21, 38, 157, 219, 222, 345, 485, 572, 813
SspMI CTAG 1 cut(s) 1129
StyD4I CCNGG 4 cut(s) 176, 190, 246, 1006
StyI CCWWGG 3 cut(s) 688, 912, 1093
TaaI ACNGT 6 cut(s) 283, 473, 481, 697, 959, 976
TaiI ACGT 6 cut(s) 189, 381, 396, 401, 467, 911
TaqI TCGA 6 cut(s) 14, 117, 204, 428, 927, 1027
TasI AATT 1 cut(s) 529
TatI WGTACW 2 cut(s) 147, 354
TauI GCSGC 3 cut(s) 41, 221, 224
Tru1I TTAA 1 cut(s) 746
Tru9I TTAA 1 cut(s) 746
TscAI CASTG 4 cut(s) 478, 700, 964, 979
TseFI GTSAC 5 cut(s) 283, 379, 394, 647, 965
TseI GCWGC 2 cut(s) 449, 602
Tsp45I GTSAC 5 cut(s) 283, 379, 394, 647, 965
TspDTI ATGAA 6 cut(s) 493, 613, 673, 694, 1063, 1078
TspGWI ACGGA 1 cut(s) 302
TspRI CASTG 4 cut(s) 478, 700, 964, 979
VneI GTGCAC 1 cut(s) 564
VpaK11BI GGWCC 3 cut(s) 174, 942, 1004
XapI RAATTY 1 cut(s) 529
XceI RCATGY 1 cut(s) 668
XcmI CCANNNNNNNNNTGG 1 cut(s) 484
XmiI GTMKAC 1 cut(s) 927
XspI CTAG 1 cut(s) 1129
ZraI GACGTC 1 cut(s) 187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.