Rroxscaffold_7G00194240

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
35996924 .. 36002165
5242 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00194240.1

Sequence Viewer

Length: 2022 bp
ATGATCAATGAATTATTGGCAGTGGCACAAATGGATGTTCCTCAGAACTTGAGCAACATGAGTTACAGACATTTGGTGGAAATGCTAGTCCACTACTTGCAGCCACGGAGGTATATGATTGTCTTAGATGATGTGTGGGACACTAATCTTTGGAGATCCATAGATGTTGCACTTCCCAATGGAACTCATGGTAGCCGAATCATGCTTACAACTCGGAACAAAGACATAGCTTCTTTGGCATTTGGAGTCGAAAGTCATGTTCATCAGGTTGAACCTCTTAATACAAATGAGGCTTGGGATCTTTTCTCCAGAAGAGCATTCTCTGGTGGGAGTGACAAGTCTTGTCCACCAGAGCTTCAAATCATAGCTTGGGAGCTTGTAGGAAAATGTGAAGGCTTACCTCTAGGACTTGTGGCTTTGGGTTCTCTCATGTCAACCAAAAGATTTGTGTCCGAGTGGAAGAAAGTTTACAATAGCATGAGTTGGGAGCTCAGCAATAATCCGACACTTGAAGTAGTGAAGAGCATTTTGTTGCTAAGCTTCAACGATCTACCTTACCGACTCAAACACTGCTTCTTATATTTCTGCATTTTTCCTGAAGATTACGCAATTAAGTGCAAAAGGCTAGTTCGGTTGTGGATAGCAGAGGGGTTTGTTGAACAAGTTAGAGGGGGTCAGCCAGAAGAGATAGCTGAGAGCTACCTAGCAGAGCTAACTTGCCGCTGTATGCTTCAAGTGGTTGAGAGGGAACCATCTGGAAAGGCAAAAAAATTTAAAATGCATGACCTTCTGCGAGAACTTGCCATTTCAATTTCAGAAGCAGAGAAGTTTTGTACTGTGTATAATGAGAAAGAAACAAATGAAGAGAGACGAGCTCCACGCCGCCTTTCAATACAAGGAAGCTCTGGAAAAGTACGAGCACCCAAAGACATGACAAAGGTACGCTCATTCTTTGTATTTGCTCCTAAGATGATGGCCTCTTCTTCTTCTTTGGAAAAAGTATTACCATCTGGTTTCAAACTGTTGAGGGTCTTGGATCTTAAATATGTTCCGATCCAGGAATTGCCAGATGAAATAATGAAGTGCTTTAACTTGACGAGTTTGAACTTGAAAGGGACAGAAGTAAGAAAGCTACCAAAACGCATAGGGAATCTTCAGAACTTGGAAACAATGGATATTAGGGACTCCAATATAAGGGAACTTCCAGTTGGAATTGTGAAGTTACAGAAGTTGCGACATCTTTTCATGTACCATTTCAATTATGGAGCTTACAAGTCTTTTAATAGCTTTCAAGGCACAAAAGCACCAGCAGGCATATGTAAGCTACAGAGTCTGCAAATTTTGGATTCAATCGAGGCAGGAAGTGAGTTGATCAAAAAGCTTCAGCACATGACCCAACTCACTGCATTAGGCTTAGCGAATGTGAAGGAAGCCGATGAGATAGACTTATGCAAGTCAATCGAAAGCATGCAACTGATGGAATGCTTAACCGTCAAGACAAGTAGTGAGGATGAGGTGTTACGCATGGATGCATTGTTGTCGGCTCCTCCTCTGCTGAAAACACTTGTTTTAACTGGAAAGTTAAACAAGGTTCCGCTCTGGTTTGCTTCTCTTGAGAGCCTTACCGTCTTATATTTGCATTGGTCCAGATCAACAGAAGACTTTCTTCCTCACATTCATGCACTACCTAATTTGACCAAACTTTGGCTATGCAATGCATATGTAGGAAACCAGTTGCTCTTTCAAACTGGATTCCAAAAGCTTTCTGGTTTGTACATAACCAATTTTCCTCAGTTGAATCTGATCACCATAGAGAAGGGGGTGATGCCAGCTCTGAAGACTCTGGACATTTCTGAATGCATGGAGTTAAAGCGATTGCCTCGCGGAATCAAACTTCTGACATGTCTCCAGAAGTTGCATCTGCACAGGGTTCCCAATGAACTCGTGGAGCGCATGCGCCGAGAACGAGGTGTGGATCATTCAGAGGTTAAACACATCTCTGATATTCGTCTTTTCCACTAA

Protein Analysis

673

Amino Acids

76.97

Weight (kDa)

8.82

Isoelectric Point (pI)

51.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 14 - 108 7.7e-24 NB-ARC domain
WHD_DRP PF23559 197 - 268 2.4e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 313 - 641 3.9e-41 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1704
AccBSI CCGCTC 1 cut(s) 1597
AccII CGCG 1 cut(s) 1884
AciI CCGC 4 cut(s) 721, 883, 1595, 1884
AclWI GGATC 5 cut(s) 150, 306, 1044, 1048, 1983
AcsI RAATTY 2 cut(s) 770, 1338
AcuI CTGAAG 4 cut(s) 618, 1139, 1367, 1856
AfaI GTAC 5 cut(s) 835, 915, 942, 1250, 1775
AfiI CCNNNNNNNGG 2 cut(s) 1194, 1704
AflIII ACRYGT 1 cut(s) 1901
AjnI CCWGG 1 cut(s) 1056
AjuI GAANNNNNNNTTGG 2 cut(s) 1191, 1223
Alw21I GWGCWC 3 cut(s) 492, 877, 922
Alw26I GTCTC 2 cut(s) 862, 1910
AlwI GGATC 5 cut(s) 150, 306, 1044, 1048, 1983
AlwNI CAGNNNCTG 1 cut(s) 1333
AoxI GGCC 1 cut(s) 975
ApeKI GCWGC 1 cut(s) 100
ApoI RAATTY 2 cut(s) 770, 1338
Asp700I GAANNNNTTC 1 cut(s) 1662
AspLEI GCGC 2 cut(s) 1953, 1959
AspS9I GGNCC 1 cut(s) 1644
AsuHPI GGTGA 2 cut(s) 1798, 1834
AvaII GGWCC 1 cut(s) 1644
BanII GRGCYC 2 cut(s) 492, 877
BarI GAAGNNNNNNTAC 2 cut(s) 452, 484
BauI CACGAG 1 cut(s) 1943
BbsI GAAGAC 2 cut(s) 1665, 1844
Bbv12I GWGCWC 3 cut(s) 492, 877, 922
BbvI GCAGC 1 cut(s) 112
BccI CCATC 4 cut(s) 760, 967, 1015, 1471
BcgI CGANNNNNNTGC 4 cut(s) 1441, 1475, 1521, 1555
BciT130I CCWGG 1 cut(s) 1058
BclI TGATCA 3 cut(s) 3, 1371, 1803
BcoDI GTCTC 2 cut(s) 862, 1910
BfaI CTAG 4 cut(s) 86, 404, 626, 704
BfmI CTRYAG 1 cut(s) 1325
BisI GCNGC 3 cut(s) 101, 721, 883
BlpI GCTNAGC 3 cut(s) 491, 536, 1414
BlsI GCNGC 3 cut(s) 102, 722, 884
Bme1390I CCNGG 1 cut(s) 1058
Bme18I GGWCC 1 cut(s) 1644
BmgT120I GGNCC 1 cut(s) 1644
BmiI GGNNCC 4 cut(s) 750, 1545, 1593, 1932
BmrFI CCNGG 1 cut(s) 1058
BmsI GCATC 3 cut(s) 1519, 1815, 1927
BpiI GAAGAC 2 cut(s) 1665, 1844
BplI GAGNNNNNCTC 2 cut(s) 859, 891
BpmI CTGGAG 2 cut(s) 292, 1892
Bpu1102I GCTNAGC 3 cut(s) 491, 536, 1414
BpuEI CTTGAG 2 cut(s) 70, 1634
BsaJI CCNNGG 1 cut(s) 104
Bsc4I CCNNNNNNNGG 2 cut(s) 1194, 1704
Bse1I ACTGG 4 cut(s) 1205, 1579, 1732, 1753
Bse3DI GCAATG 1 cut(s) 1720
BseBI CCWGG 1 cut(s) 1058
BseDI CCNNGG 1 cut(s) 104
BseGI GGATG 3 cut(s) 40, 1516, 1534
BseLI CCNNNNNNNGG 2 cut(s) 1194, 1704
BseMI GCAATG 1 cut(s) 1720
BseMII CTCAG 4 cut(s) 56, 505, 684, 1805
BseNI ACTGG 4 cut(s) 1205, 1579, 1732, 1753
BseRI GAGGAG 2 cut(s) 1536, 1539
BseXI GCAGC 1 cut(s) 112
BsgI GTGCAG 1 cut(s) 1907
Bsh1236I CGCG 1 cut(s) 1884
BshFI GGCC 1 cut(s) 977
BsiHKAI GWGCWC 3 cut(s) 492, 877, 922
BslFI GGGAC 3 cut(s) 152, 1129, 1196
BslI CCNNNNNNNGG 2 cut(s) 1194, 1704
BsmAI GTCTC 2 cut(s) 862, 1910
BsmBI CGTCTC 1 cut(s) 862
BsmFI GGGAC 3 cut(s) 152, 1129, 1196
BsmI GAATGC 3 cut(s) 317, 1487, 1862
BsnI GGCC 1 cut(s) 977
Bsp1286I GDGCHC 3 cut(s) 492, 877, 922
Bsp1407I TGTACA 1 cut(s) 1773
Bsp1720I GCTNAGC 3 cut(s) 491, 536, 1414
BspACI CCGC 4 cut(s) 721, 883, 1595, 1884
BspANI GGCC 1 cut(s) 977
BspCNI CTCAG 4 cut(s) 55, 504, 685, 1804
BspFNI CGCG 1 cut(s) 1884
BspLI GGNNCC 4 cut(s) 750, 1545, 1593, 1932
BspPI GGATC 5 cut(s) 150, 306, 1044, 1048, 1983
BspQI GCTCTTC 2 cut(s) 307, 515
BsrBI CCGCTC 1 cut(s) 1597
BsrDI GCAATG 1 cut(s) 1720
BsrGI TGTACA 1 cut(s) 1773
BsrI ACTGG 4 cut(s) 1205, 1579, 1732, 1753
BssECI CCNNGG 1 cut(s) 104
BssSI CACGAG 1 cut(s) 1943
Bst2BI CACGAG 1 cut(s) 1943
Bst2UI CCWGG 1 cut(s) 1058
Bst4CI ACNGT 4 cut(s) 838, 1023, 1492, 1627
Bst6I CTCTTC 5 cut(s) 307, 515, 678, 858, 985
BstAUI TGTACA 1 cut(s) 1773
BstC8I GCNNGC 4 cut(s) 1312, 1469, 1830, 1955
BstDEI CTNAG 8 cut(s) 42, 124, 491, 536, 693, 966, 1414, 1791
BstDSI CCRYGG 1 cut(s) 104
BstF5I GGATG 3 cut(s) 40, 1516, 1534
BstFNI CGCG 1 cut(s) 1884
BstHHI GCGC 2 cut(s) 1953, 1959
BstMAI GTCTC 2 cut(s) 862, 1910
BstMWI GCNNNNNNNGC 2 cut(s) 236, 1293
BstNI CCWGG 1 cut(s) 1058
BstNSI RCATGY 3 cut(s) 1471, 1905, 1957
BstSCI CCNGG 1 cut(s) 1056
BstSFI CTRYAG 1 cut(s) 1325
BstUI CGCG 1 cut(s) 1884
BstV1I GCAGC 1 cut(s) 112
BstV2I GAAGAC 2 cut(s) 1665, 1844
BstX2I RGATCY 3 cut(s) 155, 298, 1036
BstYI RGATCY 3 cut(s) 155, 298, 1036
BsuRI GGCC 1 cut(s) 977
BtgI CCRYGG 1 cut(s) 104
BtsCI GGATG 3 cut(s) 40, 1516, 1534
BtsI GCAGTG 3 cut(s) 27, 568, 1401
BtsIMutI CAGTG 3 cut(s) 27, 568, 1401
Cac8I GCNNGC 4 cut(s) 1312, 1469, 1830, 1955
CaiI CAGNNNCTG 1 cut(s) 1333
CfoI GCGC 2 cut(s) 1953, 1959
Cfr13I GGNCC 1 cut(s) 1644
Csp6I GTAC 5 cut(s) 834, 914, 941, 1249, 1774
CviQI GTAC 5 cut(s) 834, 914, 941, 1249, 1774
DdeI CTNAG 8 cut(s) 42, 124, 491, 536, 693, 966, 1414, 1791
DraI TTTAAA 1 cut(s) 775
Eam1104I CTCTTC 5 cut(s) 307, 515, 678, 858, 985
EarI CTCTTC 5 cut(s) 307, 515, 678, 858, 985
Ecl136II GAGCTC 2 cut(s) 490, 875
Eco24I GRGCYC 2 cut(s) 492, 877
Eco47I GGWCC 1 cut(s) 1644
Eco53kI GAGCTC 2 cut(s) 490, 875
Eco57I CTGAAG 4 cut(s) 618, 1139, 1367, 1856
EcoICRI GAGCTC 2 cut(s) 490, 875
EcoRII CCWGG 1 cut(s) 1056
EcoT22I ATGCAT 4 cut(s) 783, 1534, 1720, 1862
EcoT38I GRGCYC 2 cut(s) 492, 877
Esp3I CGTCTC 1 cut(s) 862
FalI AAGNNNNNCTT 2 cut(s) 1650, 1682
FaqI GGGAC 3 cut(s) 152, 1129, 1196
FauNDI CATATG 2 cut(s) 1316, 1720
FbaI TGATCA 3 cut(s) 3, 1371, 1803
Fnu4HI GCNGC 3 cut(s) 101, 721, 883
FokI GGATG 3 cut(s) 47, 1523, 1541
FriOI GRGCYC 2 cut(s) 492, 877
Fsp4HI GCNGC 3 cut(s) 101, 721, 883
FspBI CTAG 4 cut(s) 86, 404, 626, 704
GlaI GCGC 2 cut(s) 1952, 1958
GluI GCNGC 3 cut(s) 101, 721, 883
GsuI CTGGAG 2 cut(s) 292, 1892
HaeIII GGCC 1 cut(s) 977
HhaI GCGC 2 cut(s) 1953, 1959
Hin6I GCGC 2 cut(s) 1951, 1957
HinP1I GCGC 2 cut(s) 1951, 1957
HincII GTYRAC 1 cut(s) 435
HindII GTYRAC 1 cut(s) 435
HindIII AAGCTT 3 cut(s) 538, 1379, 1760
HphI GGTGA 2 cut(s) 1798, 1834
Hpy166II GTNNAC 4 cut(s) 91, 347, 435, 469
Hpy188III TCNNGA 9 cut(s) 309, 596, 756, 906, 1495, 1613, 1647, 1844, 1909
Hpy8I GTNNAC 4 cut(s) 91, 347, 435, 469
HpyAV CCTTC 4 cut(s) 386, 797, 1420, 1810
HpyCH4III ACNGT 4 cut(s) 838, 1023, 1492, 1627
HpyF10VI GCNNNNNNNGC 2 cut(s) 236, 1293
HpyF3I CTNAG 8 cut(s) 42, 124, 491, 536, 693, 966, 1414, 1791
HspAI GCGC 2 cut(s) 1951, 1957
Ksp22I TGATCA 3 cut(s) 3, 1371, 1803
LguI GCTCTTC 2 cut(s) 307, 515
LmnI GCTCC 7 cut(s) 373, 487, 880, 967, 1265, 1549, 1948
Lsp1109I GCAGC 1 cut(s) 112
LweI GCATC 3 cut(s) 1519, 1815, 1927
MaeI CTAG 4 cut(s) 86, 404, 626, 704
MaeIII GTNAC 4 cut(s) 62, 332, 1221, 1518
MbiI CCGCTC 1 cut(s) 1597
MflI RGATCY 3 cut(s) 155, 298, 1036
MhlI GDGCHC 3 cut(s) 492, 877, 922
MlyI GAGTC 5 cut(s) 255, 555, 1178, 1339, 1834
MmeI TCCRAC 2 cut(s) 527, 1189
Mph1103I ATGCAT 4 cut(s) 783, 1534, 1720, 1862
MroXI GAANNNNTTC 1 cut(s) 1662
MslI CAYNNNNRTG 1 cut(s) 1677
MspA1I CMGCKG 1 cut(s) 723
MspR9I CCNGG 1 cut(s) 1058
Mva1269I GAATGC 3 cut(s) 317, 1487, 1862
MvaI CCWGG 1 cut(s) 1058
MvnI CGCG 1 cut(s) 1884
MwoI GCNNNNNNNGC 2 cut(s) 236, 1293
NdeI CATATG 2 cut(s) 1316, 1720
NlaIV GGNNCC 4 cut(s) 750, 1545, 1593, 1932
NmeAIII GCCGAG 1 cut(s) 1985
NmuCI GTSAC 1 cut(s) 332
NsiI ATGCAT 4 cut(s) 783, 1534, 1720, 1862
NspI RCATGY 3 cut(s) 1471, 1905, 1957
PaeI GCATGC 2 cut(s) 1471, 1957
PciI ACATGT 1 cut(s) 1901
PciSI GCTCTTC 2 cut(s) 307, 515
PctI GAATGC 3 cut(s) 317, 1487, 1862
PdmI GAANNNNTTC 1 cut(s) 1662
PfeI GAWTC 6 cut(s) 198, 1150, 1346, 1752, 1798, 1887
PflMI CCANNNNNTGG 1 cut(s) 1704
PfoI TCCNGGA 1 cut(s) 1056
PkrI GCNGC 3 cut(s) 102, 722, 884
PleI GAGTC 5 cut(s) 254, 555, 1178, 1338, 1834
PpsI GAGTC 5 cut(s) 254, 555, 1178, 1338, 1834
PscI ACATGT 1 cut(s) 1901
Psp124BI GAGCTC 2 cut(s) 492, 877
Psp6I CCWGG 1 cut(s) 1056
PspGI CCWGG 1 cut(s) 1056
PspN4I GGNNCC 4 cut(s) 750, 1545, 1593, 1932
PspPI GGNCC 1 cut(s) 1644
PstNI CAGNNNCTG 1 cut(s) 1333
PsuI RGATCY 3 cut(s) 155, 298, 1036
RsaI GTAC 5 cut(s) 835, 915, 942, 1250, 1775
RsaNI GTAC 5 cut(s) 834, 914, 941, 1249, 1774
RseI CAYNNNNRTG 1 cut(s) 1677
SacI GAGCTC 2 cut(s) 492, 877
SapI GCTCTTC 2 cut(s) 307, 515
SatI GCNGC 3 cut(s) 101, 721, 883
Sau96I GGNCC 1 cut(s) 1644
SchI GAGTC 5 cut(s) 255, 555, 1178, 1339, 1834
ScrFI CCNGG 1 cut(s) 1058
SduI GDGCHC 3 cut(s) 492, 877, 922
SfaNI GCATC 3 cut(s) 1519, 1815, 1927
SfcI CTRYAG 1 cut(s) 1325
SinI GGWCC 1 cut(s) 1644
SmiMI CAYNNNNRTG 1 cut(s) 1677
SmlI CTYRAG 2 cut(s) 49, 1613
SmoI CTYRAG 2 cut(s) 49, 1613
SphI GCATGC 2 cut(s) 1471, 1957
SsiI CCGC 4 cut(s) 721, 883, 1595, 1884
SspMI CTAG 4 cut(s) 86, 404, 626, 704
SstI GAGCTC 2 cut(s) 492, 877
StyD4I CCNGG 1 cut(s) 1056
TaaI ACNGT 4 cut(s) 838, 1023, 1492, 1627
TaqI TCGA 3 cut(s) 249, 1353, 1461
TatI WGTACW 2 cut(s) 833, 1773
TauI GCSGC 2 cut(s) 723, 885
TfiI GAWTC 6 cut(s) 198, 1150, 1346, 1752, 1798, 1887
TscAI CASTG 3 cut(s) 27, 575, 1408
TseFI GTSAC 1 cut(s) 332
TseI GCWGC 1 cut(s) 100
Tsp45I GTSAC 1 cut(s) 332
TspDTI ATGAA 8 cut(s) 24, 251, 876, 1086, 1094, 1234, 1667, 1953
TspGWI ACGGA 1 cut(s) 121
TspRI CASTG 3 cut(s) 27, 575, 1408
Van91I CCANNNNNTGG 1 cut(s) 1704
VpaK11BI GGWCC 1 cut(s) 1644
XapI RAATTY 2 cut(s) 770, 1338
XceI RCATGY 3 cut(s) 1471, 1905, 1957
XcmI CCANNNNNNNNNTGG 3 cut(s) 1259, 1763, 1942
XmnI GAANNNNTTC 1 cut(s) 1662
XspI CTAG 4 cut(s) 86, 404, 626, 704
Zsp2I ATGCAT 4 cut(s) 783, 1534, 1720, 1862
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.