Prupe.6G200900_v2.0.a1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000110
Physical Location & Seq
Forward (+)
20874694 .. 20877405
2712 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G200900.1

Sequence Viewer

Length: 2709 bp
ATGGCGTCTGCTGCAACAGACCTCTTCATTGGAAAATTTGTAGCCATTCTAGAGAGTGAAGCAGCCTCCATAGCGGGTGTTCGTGATCAAGTTGATGAGATTAAGCAGGAGCTGGTATTCATGAAATCCTTCTTAGATGATGCTGACGGCGGAGAGCAGGCACACACACAAGTACAGAAAGCGTGGGTCGCAAGCGTTCGAGACTTGGCCAATGATGTTGAAAACACCATTGATGAGTTCATGTATCACGTGTACGAGCAGCGAAATGGCGGTCGATTTGCCAGGTGGATCCACAAAACCATTCACTTTCCAAAGCACCTTTGGTATAAGCGTAAAATAGCCAACAAGTTACAGAAAATCGCGACTGCAATTAGAGCTATTACAGAGAGAAATCAGAGATATGGTGGTGGTGCAGCTGTAGAAGGAAAAAGTACTTCTTCTGAGGATATTCGCAGATGGGTGCAGAATCAAGGGGAGTCTTCTATTTATCATAAGGAGGATGAACTCGTCGGGATTGAAGGTGATAAGAACTTGTTAATGGGATGGCTGATGAACGAAGAGCAACGCCAAACTGTTGTGTCTGTGGTCGGGATGGGAGGATCGGGGAAGACAACTCTAGTTGCAAGGACTTTCAAAGATGAAATTGTACAGAGACATTTCGAATGCTATGCGTGGATTACTGTTTCCCAATCTTATGTGATTGAAGACTTACTTAGAAGATTGATCAAAGAATTCCACAAAGCAAAGAAGGAAGAGGTCCCTGCAGACATGAATGCCATGAGTTATAACGAATTGCTGGAGATTTTGATGAACTGCTTGGGAACTAAAAGGTACCTAGTTGTATTGGATGACGTGTGGGATGTCCACCTTTGGGAGAAAATAAGGTTTTCATTTCCAGATAAACAACTTGAAAGTCGAGTCATGCTTACAACTCGAAGAGAAGACATAGCATCCTCTTCTTTTGGAGTTGAAAGCCATGTTCACAAGATTCAACCGCTGGAAAGGAGTGATGCTTGGGAGCTCTTCAGCATGAAAGCATTCTCAAGTTATCAGAACAAATCTTGTTCACCTGAACTTCTGCCTTTAGCTCGGGAACTTGTGGAAAAGTGTGAAGGCTTACCACTCGCGATCGTAGCCTTGAGTGGTCTCATGTCTTCTAAGAAGTCACTTGCAGAGTGGAGCACAGTCTACAACAGCTTAAATTGGCATCTAACAAACAATTCTTTGTTAGAACCTATGAAGATGCGCATCTTGTTGTTTAGTTTTAATGATTTGCCATACCGACTGAAGCAATGCTTTCTATATTGTTCCCTTTTCCCTGAAGATCATGTGATCATAAATATTAAGCTCATCAAATTGTGGATTGCTGAAGGATTTGTTGAACATGTCGAAGGCGTCACACCAGAAGAAGTTGCAAAGAGCTATCTTATGGAACTCATTTTTCGTAACATGCTACAGGAAAGGTTTGTAGCATCCAGGCCAGCATGTAAGATGCATGATGTTATGCGGGAGATTGCTTTGTCAAAAGCAAAAAAAGAAAAGTTTTGCACTGTACATGATGGGAGTGAAACAGTAGAAGAAACTGGAGCACTCCGTTTGTCAATTCAAACAACTAATGGAGAAATTGGATCATGCACAGGTATATCACGGCTCCGTTCGTTTCTCGTCTTTGCCACTGGCGTATCCTCATTCTCTTTCTCAAATGAATTACCTTTTGACCTTAAATTGTTGAAGGCTCTAGATTTGGAGGATGTCCCAATAGATAATTTGCCAGACAGAGTAACGTGCTTATTCAATTTAAAATATTTAAATTTGGATGGAACTCTAATTAAGGAGCTTCCAGAATCCATTGGACAGCTCCGCAACCTTCAGGCCTTGAACGTCATGGACACAAATATAGAGGCACTTCCAAGAGGGATTTCCAAGTTGCTAAACTTACGCCATTTAGTTGCGGGCAGATTCATTTCCAGAAAGATAATTGGGGTAAGAATACCATCAAGTATTGGTAAGATGAAGAAATTGCAATCTTTGGCGTATATTGAATCAGAAGGAAACATTATTAGACTTATTGGAAGTATGACCCAGCTTACGTTCCTTGGCATTACAAATGTGAAAGAAAGAGACGAGGAGGACCTATGTGCCTCAATTCAAGAGATGAAGGTCCTTTCCCGCTTGCTTTTATTTGGAGCCGATGGAGAGGAATTTCTTCGAGTCGACGCATTGTCTTCACCGCCTCCCTACCTTGATAGACTTGACTTGATCGGCAAACTGGGAAAGGTACCACATTGGTTTTGTTCACTCCACTCTCTCACAATTATGAATCTGACTCAGTCTGCACTTGAAGAAGATTTACTACCTCATATTGAAGCATTGCCCTCTCTACGTTCTCTTTCGCTTGATAATGCCTCTGTTAGGAAAGAGTTATGTTTCAACAGAGGCTTTGTGAAGCTTCGGCAATTGTGGTTTTGGAATCTCGCATTATTAAATAAGATAACTATAGAAAAAGGGGCGATGCCAAATCTCGAGCTCTTAAGCATTGATGGTTGCTTGACATTAGAAACATTGCCACAGGGTATTGAGCACCTTGCTAAACTACAAGGATACAGATTTTATAATGTTTCAGAGAAGTTTAGAGAGTCCATAAACGAAGGAGGTGTGGATCATCCAAGGATGCTACTTGTCGTCGAGAGATGTAAGAAATATACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

903

Amino Acids

102.68

Weight (kDa)

6.39

Isoelectric Point (pI)

49.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 786, 2613
Acc16I TGCGCA 1 cut(s) 1247
Acc65I GGTACC 2 cut(s) 831, 2278
AccB1I GGYRCC 2 cut(s) 831, 2278
AccI GTMKAC 2 cut(s) 1188, 2214
AccII CGCG 2 cut(s) 362, 1127
AciI CCGC 9 cut(s) 74, 150, 270, 995, 1507, 1861, 1952, 2170, 2231
AclWI GGATC 5 cut(s) 283, 296, 607, 1636, 2667
AcoI YGGCCR 1 cut(s) 207
AcsI RAATTY 4 cut(s) 35, 731, 1810, 2201
AcuI CTGAAG 5 cut(s) 1009, 1307, 1341, 1389, 1853
AcvI CACGTG 1 cut(s) 250
AcyI GRCGYC 2 cut(s) 5, 1395
AfaI GTAC 7 cut(s) 174, 254, 433, 648, 833, 1554, 2280
AfiI CCNNNNNNNGG 2 cut(s) 871, 2412
AflII CTTAAG 1 cut(s) 2530
AflIII ACRYGT 3 cut(s) 249, 852, 1384
AhdI GACNNNNNGTC 1 cut(s) 2221
AjiI CACGTC 1 cut(s) 853
AjnI CCWGG 2 cut(s) 281, 1475
AjuI GAANNNNNNNTTGG 2 cut(s) 1903, 1935
Alw21I GWGCWC 5 cut(s) 1023, 1184, 1591, 2529, 2583
Alw26I GTCTC 4 cut(s) 195, 646, 1151, 2115
AlwI GGATC 5 cut(s) 283, 296, 607, 1636, 2667
AlwNI CAGNNNCTG 1 cut(s) 112
Ama87I CYCGRG 2 cut(s) 1089, 2522
AoxI GGCC 3 cut(s) 207, 1478, 1872
ApeKI GCWGC 4 cut(s) 11, 62, 259, 413
ApoI RAATTY 4 cut(s) 35, 731, 1810, 2201
ArsI GACNNNNNNTTYG 2 cut(s) 256, 288
Asp700I GAANNNNTTC 3 cut(s) 128, 1037, 2205
Asp718I GGTACC 2 cut(s) 831, 2278
AspLEI GCGC 1 cut(s) 1248
AspS9I GGNCC 3 cut(s) 757, 2131, 2161
AsuHPI GGTGA 3 cut(s) 533, 1059, 2220
AsuII TTCGAA 1 cut(s) 660
AvaI CYCGRG 2 cut(s) 1089, 2522
AvaII GGWCC 3 cut(s) 757, 2131, 2161
BaeI ACNNNNGTAYC 2 cut(s) 1665, 1698
BalI TGGCCA 1 cut(s) 209
BamHI GGATCC 1 cut(s) 288
BanI GGYRCC 2 cut(s) 831, 2278
BanII GRGCYC 2 cut(s) 1023, 2529
BarI GAAGNNNNNNTAC 4 cut(s) 2334, 2337, 2366, 2369
BbrPI CACGTG 1 cut(s) 250
BbsI GAAGAC 6 cut(s) 471, 614, 711, 948, 1146, 2217
Bbv12I GWGCWC 5 cut(s) 1023, 1184, 1591, 2529, 2583
BbvI GCAGC 3 cut(s) 74, 271, 425
BccI CCATC 8 cut(s) 450, 537, 586, 1553, 1811, 2002, 2186, 2534
BceAI ACGGC 2 cut(s) 163, 1664
BcgI CGANNNNNNTGC 2 cut(s) 650, 684
BciT130I CCWGG 2 cut(s) 283, 1477
BciVI GTATCC 2 cut(s) 1693, 2594
BclI TGATCA 3 cut(s) 85, 723, 1332
BcoDI GTCTC 4 cut(s) 195, 646, 1151, 2115
BfaI CTAG 4 cut(s) 50, 617, 836, 1739
BfmI CTRYAG 4 cut(s) 417, 762, 1454, 2496
BfrI CTTAAG 1 cut(s) 2530
BfuI GTATCC 2 cut(s) 1693, 2594
BisI GCNGC 4 cut(s) 12, 63, 260, 414
BlsI GCNGC 4 cut(s) 13, 64, 261, 415
BmcAI AGTACT 1 cut(s) 433
Bme1390I CCNGG 2 cut(s) 283, 1477
Bme18I GGWCC 3 cut(s) 757, 2131, 2161
BmeRI GACNNNNNGTC 1 cut(s) 2221
BmeT110I CYCGRG 2 cut(s) 1089, 2522
BmgBI CACGTC 1 cut(s) 853
BmgT120I GGNCC 3 cut(s) 757, 2131, 2161
BmiI GGNNCC 6 cut(s) 290, 759, 833, 1652, 2188, 2280
BmrFI CCNGG 2 cut(s) 283, 1477
BmrI ACTGGG 1 cut(s) 2279
BmuI ACTGGG 1 cut(s) 2279
BpiI GAAGAC 6 cut(s) 471, 614, 711, 948, 1146, 2217
BpmI CTGGAG 2 cut(s) 818, 1605
Bpu14I TTCGAA 1 cut(s) 660
BpuEI CTTGAG 2 cut(s) 1027, 1159
BsaAI YACGTR 2 cut(s) 250, 2706
BsaBI GATNNNNATC 1 cut(s) 1247
BsaHI GRCGYC 2 cut(s) 5, 1395
BsaI GGTCTC 1 cut(s) 1151
BsaJI CCNNGG 2 cut(s) 2095, 2666
Bsc4I CCNNNNNNNGG 2 cut(s) 871, 2412
Bse1I ACTGG 3 cut(s) 1588, 1681, 2274
Bse3DI GCAATG 3 cut(s) 1298, 2369, 2561
Bse8I GATNNNNATC 1 cut(s) 1247
BseBI CCWGG 2 cut(s) 283, 1477
BseDI CCNNGG 2 cut(s) 2095, 2666
BseJI GATNNNNATC 1 cut(s) 1247
BseLI CCNNNNNNNGG 2 cut(s) 871, 2412
BseMI GCAATG 3 cut(s) 1298, 2369, 2561
BseMII CTCAG 2 cut(s) 432, 2342
BseNI ACTGG 3 cut(s) 1588, 1681, 2274
BseRI GAGGAG 1 cut(s) 2141
BseXI GCAGC 3 cut(s) 74, 271, 425
BseYI CCCAGC 1 cut(s) 2082
BsgI GTGCAG 3 cut(s) 432, 482, 2319
Bsh1236I CGCG 2 cut(s) 362, 1127
Bsh1285I CGRYCG 2 cut(s) 274, 1131
BshFI GGCC 3 cut(s) 209, 1480, 1874
BshNI GGYRCC 2 cut(s) 831, 2278
BsiEI CGRYCG 2 cut(s) 274, 1131
BsiHKAI GWGCWC 5 cut(s) 1023, 1184, 1591, 2529, 2583
BsiHKCI CYCGRG 2 cut(s) 1089, 2522
BslFI GGGAC 2 cut(s) 743, 1739
BslI CCNNNNNNNGG 2 cut(s) 871, 2412
BsmAI GTCTC 4 cut(s) 195, 646, 1151, 2115
BsmBI CGTCTC 1 cut(s) 2115
BsmFI GGGAC 2 cut(s) 743, 1739
BsmI GAATGC 3 cut(s) 668, 778, 1037
BsnI GGCC 3 cut(s) 209, 1480, 1874
Bso31I GGTCTC 1 cut(s) 1151
BsoBI CYCGRG 2 cut(s) 1089, 2522
Bsp119I TTCGAA 1 cut(s) 660
Bsp1286I GDGCHC 5 cut(s) 1023, 1184, 1591, 2529, 2583
Bsp1407I TGTACA 2 cut(s) 646, 1552
Bsp68I TCGCGA 2 cut(s) 362, 1127
BspACI CCGC 9 cut(s) 74, 150, 270, 995, 1507, 1861, 1952, 2170, 2231
BspANI GGCC 3 cut(s) 209, 1480, 1874
BspCNI CTCAG 2 cut(s) 433, 2341
BspFNI CGCG 2 cut(s) 362, 1127
BspHI TCATGA 1 cut(s) 120
BspLI GGNNCC 6 cut(s) 290, 759, 833, 1652, 2188, 2280
BspMAI CTGCAG 1 cut(s) 766
BspPI GGATC 5 cut(s) 283, 296, 607, 1636, 2667
BspQI GCTCTTC 2 cut(s) 552, 1028
BspT104I TTCGAA 1 cut(s) 660
BspT107I GGYRCC 2 cut(s) 831, 2278
BspTI CTTAAG 1 cut(s) 2530
BspTNI GGTCTC 1 cut(s) 1151
BsrDI GCAATG 3 cut(s) 1298, 2369, 2561
BsrGI TGTACA 2 cut(s) 646, 1552
BsrI ACTGG 3 cut(s) 1588, 1681, 2274
BssECI CCNNGG 2 cut(s) 2095, 2666
BssNI GRCGYC 2 cut(s) 5, 1395
BssT1I CCWWGG 2 cut(s) 2095, 2666
Bst2UI CCWGG 2 cut(s) 283, 1477
Bst4CI ACNGT 5 cut(s) 574, 682, 1186, 1552, 1573
Bst6I CTCTTC 6 cut(s) 29, 552, 747, 931, 961, 1028
BstACI GRCGYC 2 cut(s) 5, 1395
BstAFI CTTAAG 1 cut(s) 2530
BstAUI TGTACA 2 cut(s) 646, 1552
BstBAI YACGTR 2 cut(s) 250, 2706
BstBI TTCGAA 1 cut(s) 660
BstC8I GCNNGC 5 cut(s) 159, 193, 1482, 1954, 2174
BstDEI CTNAG 5 cut(s) 133, 441, 713, 1158, 2328
BstENI CCTNNNNNAGG 1 cut(s) 2410
BstFNI CGCG 2 cut(s) 362, 1127
BstHHI GCGC 1 cut(s) 1248
BstMAI GTCTC 4 cut(s) 195, 646, 1151, 2115
BstMCI CGRYCG 2 cut(s) 274, 1131
BstMWI GCNNNNNNNGC 5 cut(s) 11, 71, 188, 374, 1133
BstNI CCWGG 2 cut(s) 283, 1477
BstNSI RCATGY 3 cut(s) 1388, 1453, 1488
BstSCI CCNGG 2 cut(s) 281, 1475
BstSFI CTRYAG 4 cut(s) 417, 762, 1454, 2496
BstSNI TACGTA 1 cut(s) 2706
BstUI CGCG 2 cut(s) 362, 1127
BstV1I GCAGC 3 cut(s) 74, 271, 425
BstV2I GAAGAC 6 cut(s) 471, 614, 711, 948, 1146, 2217
BstX2I RGATCY 1 cut(s) 288
BstYI RGATCY 1 cut(s) 288
BsuI GTATCC 2 cut(s) 1693, 2594
BsuRI GGCC 3 cut(s) 209, 1480, 1874
BtgZI GCGATG 1 cut(s) 2525
BtrI CACGTC 1 cut(s) 853
BtsIMutI CAGTG 2 cut(s) 1548, 1674
BtuMI TCGCGA 2 cut(s) 362, 1127
Cac8I GCNNGC 5 cut(s) 159, 193, 1482, 1954, 2174
CaiI CAGNNNCTG 1 cut(s) 112
CciI TCATGA 1 cut(s) 120
CfoI GCGC 1 cut(s) 1248
Cfr13I GGNCC 3 cut(s) 757, 2131, 2161
CseI GACGC 2 cut(s) 1384, 2225
Csp6I GTAC 7 cut(s) 173, 253, 432, 647, 832, 1553, 2279
CviQI GTAC 7 cut(s) 173, 253, 432, 647, 832, 1553, 2279
DdeI CTNAG 5 cut(s) 133, 441, 713, 1158, 2328
DraI TTTAAA 2 cut(s) 1800, 1809
DriI GACNNNNNGTC 1 cut(s) 2221
EaeI YGGCCR 1 cut(s) 207
Eam1104I CTCTTC 6 cut(s) 29, 552, 747, 931, 961, 1028
Eam1105I GACNNNNNGTC 1 cut(s) 2221
EarI CTCTTC 6 cut(s) 29, 552, 747, 931, 961, 1028
EciI GGCGGA 1 cut(s) 165
Ecl136II GAGCTC 2 cut(s) 1021, 2527
Eco105I TACGTA 1 cut(s) 2706
Eco130I CCWWGG 2 cut(s) 2095, 2666
Eco147I AGGCCT 1 cut(s) 1874
Eco24I GRGCYC 2 cut(s) 1023, 2529
Eco31I GGTCTC 1 cut(s) 1151
Eco47I GGWCC 3 cut(s) 757, 2131, 2161
Eco53kI GAGCTC 2 cut(s) 1021, 2527
Eco57I CTGAAG 5 cut(s) 1009, 1307, 1341, 1389, 1853
Eco72I CACGTG 1 cut(s) 250
Eco88I CYCGRG 2 cut(s) 1089, 2522
EcoICRI GAGCTC 2 cut(s) 1021, 2527
EcoNI CCTNNNNNAGG 1 cut(s) 2410
EcoO109I RGGNCCY 3 cut(s) 757, 2131, 2161
EcoRI GAATTC 1 cut(s) 731
EcoRII CCWGG 2 cut(s) 281, 1475
EcoT14I CCWWGG 2 cut(s) 2095, 2666
EcoT22I ATGCAT 1 cut(s) 1497
EcoT38I GRGCYC 2 cut(s) 1023, 2529
ErhI CCWWGG 2 cut(s) 2095, 2666
Esp3I CGTCTC 1 cut(s) 2115
FalI AAGNNNNNCTT 6 cut(s) 421, 453, 696, 728, 1280, 1312
FaqI GGGAC 2 cut(s) 743, 1739
FauI CCCGC 4 cut(s) 67, 1500, 1945, 2177
FbaI TGATCA 3 cut(s) 85, 723, 1332
FblI GTMKAC 2 cut(s) 1188, 2214
Fnu4HI GCNGC 4 cut(s) 12, 63, 260, 414
FriOI GRGCYC 2 cut(s) 1023, 2529
Fsp4HI GCNGC 4 cut(s) 12, 63, 260, 414
FspAI RTGCGCAY 1 cut(s) 1247
FspBI CTAG 4 cut(s) 50, 617, 836, 1739
FspI TGCGCA 1 cut(s) 1247
GlaI GCGC 1 cut(s) 1247
GluI GCNGC 4 cut(s) 12, 63, 260, 414
GsaI CCCAGC 1 cut(s) 2086
GsuI CTGGAG 2 cut(s) 818, 1605
HaeIII GGCC 3 cut(s) 209, 1480, 1874
HgaI GACGC 2 cut(s) 1384, 2225
HhaI GCGC 1 cut(s) 1248
Hin1I GRCGYC 2 cut(s) 5, 1395
Hin6I GCGC 1 cut(s) 1246
HinP1I GCGC 1 cut(s) 1246
HincII GTYRAC 1 cut(s) 2215
HindII GTYRAC 1 cut(s) 2215
HindIII AAGCTT 1 cut(s) 2447
HphI GGTGA 3 cut(s) 533, 1059, 2220
Hpy166II GTNNAC 7 cut(s) 253, 865, 982, 1067, 1189, 2215, 2297
Hpy188I TCNGA 6 cut(s) 396, 442, 1053, 2047, 2325, 2623
Hpy8I GTNNAC 7 cut(s) 253, 865, 982, 1067, 1189, 2215, 2297
Hpy99I CGWCG 3 cut(s) 512, 2219, 2687
HpyCH4III ACNGT 5 cut(s) 574, 682, 1186, 1552, 1573
HpyCH4IV ACGT 7 cut(s) 249, 852, 1784, 1881, 2090, 2383, 2705
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 71, 188, 374, 1133
HpyF3I CTNAG 5 cut(s) 133, 441, 713, 1158, 2328
HpySE526I ACGT 7 cut(s) 249, 852, 1784, 1881, 2090, 2383, 2705
Hsp92I GRCGYC 2 cut(s) 5, 1395
HspAI GCGC 1 cut(s) 1246
KpnI GGTACC 2 cut(s) 835, 2282
Ksp22I TGATCA 3 cut(s) 85, 723, 1332
LguI GCTCTTC 2 cut(s) 552, 1028
LmnI GCTCC 8 cut(s) 109, 1018, 1179, 1586, 1656, 1834, 1863, 2186
Lsp1109I GCAGC 3 cut(s) 74, 271, 425
MaeI CTAG 4 cut(s) 50, 617, 836, 1739
MaeII ACGT 7 cut(s) 249, 852, 1784, 1881, 2090, 2383, 2705
MaeIII GTNAC 5 cut(s) 348, 1164, 1396, 1445, 1780
MfeI CAATTG 1 cut(s) 2456
MflI RGATCY 1 cut(s) 288
MhlI GDGCHC 5 cut(s) 1023, 1184, 1591, 2529, 2583
MlsI TGGCCA 1 cut(s) 209
MluNI TGGCCA 1 cut(s) 209
MlyI GAGTC 5 cut(s) 485, 927, 2220, 2320, 2645
Mox20I TGGCCA 1 cut(s) 209
Mph1103I ATGCAT 1 cut(s) 1497
MroXI GAANNNNTTC 3 cut(s) 128, 1037, 2205
MscI TGGCCA 1 cut(s) 209
MslI CAYNNNNRTG 1 cut(s) 2315
Msp20I TGGCCA 1 cut(s) 209
MspA1I CMGCKG 2 cut(s) 416, 997
MspCI CTTAAG 1 cut(s) 2530
MspR9I CCNGG 2 cut(s) 283, 1477
MunI CAATTG 1 cut(s) 2456
Mva1269I GAATGC 3 cut(s) 668, 778, 1037
MvaI CCWGG 2 cut(s) 283, 1477
MvnI CGCG 2 cut(s) 362, 1127
MwoI GCNNNNNNNGC 5 cut(s) 11, 71, 188, 374, 1133
NlaIV GGNNCC 6 cut(s) 290, 759, 833, 1652, 2188, 2280
NmuCI GTSAC 2 cut(s) 1164, 1396
NruI TCGCGA 2 cut(s) 362, 1127
NsbI TGCGCA 1 cut(s) 1247
NsiI ATGCAT 1 cut(s) 1497
NspI RCATGY 3 cut(s) 1388, 1453, 1488
NspV TTCGAA 1 cut(s) 660
PaeR7I CTCGAG 1 cut(s) 2522
PagI TCATGA 1 cut(s) 120
PceI AGGCCT 1 cut(s) 1874
PciI ACATGT 1 cut(s) 1384
PciSI GCTCTTC 2 cut(s) 552, 1028
PctI GAATGC 3 cut(s) 668, 778, 1037
PdmI GAANNNNTTC 3 cut(s) 128, 1037, 2205
PfeI GAWTC 7 cut(s) 466, 988, 1844, 1959, 2042, 2320, 2470
PflFI GACNNNGTC 1 cut(s) 2329
PkrI GCNGC 4 cut(s) 13, 64, 261, 415
Ple19I CGATCG 1 cut(s) 1131
PleI GAGTC 5 cut(s) 484, 926, 2219, 2320, 2644
PmaCI CACGTG 1 cut(s) 250
PmlI CACGTG 1 cut(s) 250
PpsI GAGTC 5 cut(s) 484, 926, 2219, 2320, 2644
Ppu21I YACGTR 2 cut(s) 250, 2706
PpuMI RGGWCCY 3 cut(s) 757, 2131, 2161
PscI ACATGT 1 cut(s) 1384
PsiI TTATAA 2 cut(s) 786, 2613
Psp124BI GAGCTC 2 cut(s) 1023, 2529
Psp5II RGGWCCY 3 cut(s) 757, 2131, 2161
Psp6I CCWGG 2 cut(s) 281, 1475
PspCI CACGTG 1 cut(s) 250
PspFI CCCAGC 1 cut(s) 2082
PspGI CCWGG 2 cut(s) 281, 1475
PspN4I GGNNCC 6 cut(s) 290, 759, 833, 1652, 2188, 2280
PspPI GGNCC 3 cut(s) 757, 2131, 2161
PspPPI RGGWCCY 3 cut(s) 757, 2131, 2161
PstI CTGCAG 1 cut(s) 766
PstNI CAGNNNCTG 1 cut(s) 112
PsuI RGATCY 1 cut(s) 288
PsyI GACNNNGTC 1 cut(s) 2329
PvuI CGATCG 1 cut(s) 1131
PvuII CAGCTG 1 cut(s) 416
RruI TCGCGA 2 cut(s) 362, 1127
RsaI GTAC 7 cut(s) 174, 254, 433, 648, 833, 1554, 2280
RsaNI GTAC 7 cut(s) 173, 253, 432, 647, 832, 1553, 2279
RseI CAYNNNNRTG 1 cut(s) 2315
SacI GAGCTC 2 cut(s) 1023, 2529
SalI GTCGAC 1 cut(s) 2213
SapI GCTCTTC 2 cut(s) 552, 1028
SatI GCNGC 4 cut(s) 12, 63, 260, 414
Sau96I GGNCC 3 cut(s) 757, 2131, 2161
ScaI AGTACT 1 cut(s) 433
SchI GAGTC 5 cut(s) 485, 927, 2220, 2320, 2645
ScrFI CCNGG 2 cut(s) 283, 1477
SduI GDGCHC 5 cut(s) 1023, 1184, 1591, 2529, 2583
SfcI CTRYAG 4 cut(s) 417, 762, 1454, 2496
Sfr274I CTCGAG 1 cut(s) 2522
SfuI TTCGAA 1 cut(s) 660
SinI GGWCC 3 cut(s) 757, 2131, 2161
SlaI CTCGAG 1 cut(s) 2522
SmiI ATTTAAAT 1 cut(s) 1809
SmiMI CAYNNNNRTG 1 cut(s) 2315
SmlI CTYRAG 4 cut(s) 1042, 1138, 2522, 2530
SmoI CTYRAG 4 cut(s) 1042, 1138, 2522, 2530
SnaBI TACGTA 1 cut(s) 2706
SseBI AGGCCT 1 cut(s) 1874
SsiI CCGC 9 cut(s) 74, 150, 270, 995, 1507, 1861, 1952, 2170, 2231
SspI AATATT 2 cut(s) 1342, 1805
SspMI CTAG 4 cut(s) 50, 617, 836, 1739
SstI GAGCTC 2 cut(s) 1023, 2529
StuI AGGCCT 1 cut(s) 1874
StyD4I CCNGG 2 cut(s) 281, 1475
StyI CCWWGG 2 cut(s) 2095, 2666
SwaI ATTTAAAT 1 cut(s) 1809
TaaI ACNGT 5 cut(s) 574, 682, 1186, 1552, 1573
TaiI ACGT 7 cut(s) 252, 855, 1787, 1884, 2093, 2386, 2708
TatI WGTACW 4 cut(s) 172, 431, 646, 1552
TfiI GAWTC 7 cut(s) 466, 988, 1844, 1959, 2042, 2320, 2470
TscAI CASTG 2 cut(s) 1555, 1681
TseFI GTSAC 2 cut(s) 1164, 1396
TseI GCWGC 4 cut(s) 11, 62, 259, 413
Tsp45I GTSAC 2 cut(s) 1164, 1396
TspGWI ACGGA 2 cut(s) 1583, 1643
TspRI CASTG 2 cut(s) 1555, 1681
Tth111I GACNNNGTC 1 cut(s) 2329
Vha464I CTTAAG 1 cut(s) 2530
VpaK11BI GGWCC 3 cut(s) 757, 2131, 2161
XagI CCTNNNNNAGG 1 cut(s) 2410
XapI RAATTY 4 cut(s) 35, 731, 1810, 2201
XbaI TCTAGA 2 cut(s) 49, 1738
XceI RCATGY 3 cut(s) 1388, 1453, 1488
XcmI CCANNNNNNNNNTGG 1 cut(s) 318
XhoI CTCGAG 1 cut(s) 2522
XmiI GTMKAC 2 cut(s) 1188, 2214
XmnI GAANNNNTTC 3 cut(s) 128, 1037, 2205
XspI CTAG 4 cut(s) 50, 617, 836, 1739
ZrmI AGTACT 1 cut(s) 433
Zsp2I ATGCAT 1 cut(s) 1497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.