Prupe.6G199700_v2.0.a1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000110
Physical Location & Seq
Forward (+)
20664098 .. 20667421
3324 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G199700.1

Sequence Viewer

Length: 2721 bp
ATGACGTCTGCTGCAACAGACCTCTTCATTGGAAAATTTGTAGCCATTCTAGAGAGTGAAGCAGCCTCCATAGCGGGTGTTCGTGATCAAGTTGATGAGATTAAGCAGGAGCTGGTATTCATGAAATCCTTCTTAGAGGATGCTGACGGTGGAGAGCAGGCACACACACAAGTAGAGAAAGCGTGGGTCGCAAGCGTTCGAGACTTGGCCAATGATGTTGAAAACACCATTGATGAGTTCATGTATCGCGTGTATGAGCAACGAAATGGTGGTCGATTTTCCAGGTGGTTCCACAAAACCATTCACTTTCCAAAGCATCTTTGGTATAAGCGTCGAATAGCCAACAAGTTACAGAAAATCGCGGTGGCGATTAGAGCTATTCCAGAGAGAAATCAGAGATATCATGGTGCTGCAGCTGTAGAAGTAAAAAGTACTTCTGAGGATACTCGAAGATGGGTACGGAACCAAGCGGAGTCTTCTCTTTATCAGAAGGAGGATGAACTTGTCGGGATTGAAGGCGATAAGAACATGTTACTGGGATGGCTGATGGATGAAGCGAAGCACCAAATTGTTGTGTCCGTGGTCGGGATGGGAGGATCAGGGAAGACAACTCTAGTTGCAAGAATCTTCAAAGATGACATTGTAAAGAGAGATTTCGAATGCTATGCATGGATTACTGTTTCCCAGTCTTATGTGATTGAAGACTTACTTAGAAGATTGATAAAAGAATTCCACAAAGGAAAGAGGGAAGAGGTCCCTGCAGACATAAATGCCATGAGTTATAACGAATTGCTGGAGATTTTGGTGAACTACTTGGAGACTAAAAGGTACCTAATTGTATTGGATGACGTGTGGGATGTCCACCTTTGGGACAAAATAAGGTTTTCATTTCCAGATAAACAACTTGGAAGTCGAGTCATGCTTACAACTCGAAGAGAAGACATAGCATCCTCTTCTTTTGGAGTTGAAAGCCATGTTCACAAGATTCAACCGTTGGAAAGGGGTGATGCGTGGGAGCTTTTCAGCATGAAAGCATTCTCGAGTTATCAGAACAAATCTTGTTCACCTGAACTTTTGCCTTTAGCTCGGGAACTTGTGGAAAAGTGTGAAGGTCTACCACTCGCGATCGTAGCCTTAAGTGGTCTCATGTCTTCTAAGAAGTCACTTAAAGAGTGGAGCACAGTCTACAACAGCTTAAATTGGCATCTAACAAACAATTCTTTGTTAGAACCTATGAAGATGCGCATCTTGTTGTTTAGTTTTAATGATTTGCCATACCGATTGAAGCAATGCTTTCTCTCTTGTTCACTTTTCCCTGAAGATCATGTGATCGTAAATAATAGGCTCATCACATTGTGGATCGCTGAAGGATTTGTTGAACATGTCGAAGGGCTCACGCCAGAAGAAGTTGCAAATAGCTATCTTATGGAACTCATTTTTCGTAACATGCTACAGCAAAGGTTTCTAGGATCCCTCCCAGCATGTAAGATGCATGATCTTTTGAGGGAGATTGCTCTGTCTATAGCAAAAGAAGAAAAGTTTTGCGTTGTACATGATGGGGGTGAAATAGTAGAAGAAACTGGGGCACTCCGTTTGTCAATTCAAACAACTAATGGAGAAATTAGATCATGCACAGGTATATCACGGTTTCGTTCGTTTCTTGTCTTTGCCACTAGCGTATCCTCATTCTCTTTCCCAAATAAATTACCTTTTGACCTTAAATTGTTGAAGGTTCTGGATTTGGAGGATGTCCCAATTGATAATCTACCAGACAATCTAACGTCCTTATTCAATTTAAAATATTTAAATTTGAGTGGAACTCCAATTACTGAGCTTCCAGAATCCATTGGACAGCTCCGCAACCTTCAGACCTTGAACATCAATCTGACAAAAATAGAGGCACTTCCAAGAGGGATTTCCAAGTTGCTAAACTTACGCCATTTACTTGTGAGCAGGTCCATTTATGGAAAGGCAATTGGGGTAAGAATACCATCAAGTATTAGTAAGATGAAGAAATTGCAAACTTTGGCATATATTGAATCAGAAGGAAATATTATTAGACTTATTGGAAGTATGACCCAACTTACGTTCCTTGGCATTACAAATGTGAAAGAAAGAGACGAGGAGGACCTTTGTGCCTCAATTCAAGAGATGAAGGTCCTTTCCCGCTTGTTTTTATCTGTAGCTGATGGAGAGGAATTTCTTCGAGTTGACGCATTGTCTTCACGGACTCCCTACCTTGATAGACTTGAATTGGTCGGCAAACTGGAAAAGGTACCACATTGGTTTTGTTCACTCCACTCTCTCGCATCTTTGAATCTGTCTGGGTCCAGACTTGAAGAAGATTTACTACCTCATATTGAAGCATTGCCCTCTCTACGTTCTCTTTGGCTTCGTAATGCCTCTGTTAGGAAGGAGTTATGTTTCAACAGAGGCTTTGTGAAGCTTCGGCATTTGTGGGTTTCGGATCTCGCATTATTAAATAAGATAACTATAGAAAAAGGGGCGATGCCAAATCTCGAGTTCATAAGAATTCATGATTGCTTGACATTAGAAACATTGCCACAAGGTATTGAGGACCTTACTAATCTACAAGTATTCAGATTTGATAATGTTTCAGAGAAGTTTAGAGAGTCCATAAAAGAAGGAGGTGTGGATCATCCAAGGATGCTACTCGTCGATGAGAGATGTAAGAAATATGCAAACAAGTCCTGGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

907

Amino Acids

103.66

Weight (kDa)

6.39

Isoelectric Point (pI)

48.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
AatII GACGTC 1 cut(s) 8
Acc16I TGCGCA 1 cut(s) 1244
Acc36I ACCTGC 1 cut(s) 1944
Acc65I GGTACC 2 cut(s) 828, 2275
AccB1I GGYRCC 2 cut(s) 828, 2275
AccI GTMKAC 2 cut(s) 1114, 1185
AccII CGCG 3 cut(s) 249, 362, 1124
AciI CCGC 5 cut(s) 74, 362, 470, 1858, 2167
AclWI GGATC 6 cut(s) 604, 1367, 1464, 1477, 2475, 2664
AcoI YGGCCR 1 cut(s) 207
AcsI RAATTY 5 cut(s) 35, 728, 1807, 2198, 2532
AcuI CTGAAG 3 cut(s) 1338, 1386, 1850
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 1356
AfaI GTAC 5 cut(s) 433, 459, 830, 1551, 2277
AfiI CCNNNNNNNGG 3 cut(s) 585, 868, 2409
AflII CTTAAG 1 cut(s) 1135
AflIII ACRYGT 3 cut(s) 528, 849, 1381
AhdI GACNNNNNGTC 1 cut(s) 2218
AjiI CACGTC 1 cut(s) 850
AjnI CCWGG 2 cut(s) 281, 2711
AjuI GAANNNNNNNTTGG 2 cut(s) 1900, 1932
Alw21I GWGCWC 1 cut(s) 1181
Alw26I GTCTC 4 cut(s) 195, 812, 1148, 2112
AlwI GGATC 6 cut(s) 604, 1367, 1464, 1477, 2475, 2664
AlwNI CAGNNNCTG 1 cut(s) 112
Ama87I CYCGRG 3 cut(s) 1039, 1086, 2519
AoxI GGCC 1 cut(s) 207
ApeKI GCWGC 4 cut(s) 11, 62, 410, 413
ApoI RAATTY 5 cut(s) 35, 728, 1807, 2198, 2532
ArsI GACNNNNNNTTYG 2 cut(s) 256, 288
Asp700I GAANNNNTTC 3 cut(s) 128, 1034, 2202
Asp718I GGTACC 2 cut(s) 828, 2275
AspLEI GCGC 1 cut(s) 1245
AspS9I GGNCC 6 cut(s) 754, 1956, 2128, 2158, 2328, 2578
AsuHPI GGTGA 4 cut(s) 817, 1016, 1056, 1574
AsuII TTCGAA 1 cut(s) 657
AvaI CYCGRG 3 cut(s) 1039, 1086, 2519
AvaII GGWCC 6 cut(s) 754, 1956, 2128, 2158, 2328, 2578
BaeGI GKGCMC 1 cut(s) 1588
BaeI ACNNNNGTAYC 2 cut(s) 1662, 1695
BalI TGGCCA 1 cut(s) 209
BamHI GGATCC 1 cut(s) 1469
BanI GGYRCC 2 cut(s) 828, 2275
BanII GRGCYC 1 cut(s) 1395
BarI GAAGNNNNNNTAC 4 cut(s) 2331, 2334, 2363, 2366
BbsI GAAGAC 6 cut(s) 468, 611, 708, 945, 1143, 2214
Bbv12I GWGCWC 1 cut(s) 1181
BbvI GCAGC 3 cut(s) 74, 397, 425
BccI CCATC 7 cut(s) 447, 534, 541, 583, 1550, 1999, 2183
BcgI CGANNNNNNTGC 2 cut(s) 647, 681
BciT130I CCWGG 2 cut(s) 283, 2713
BciVI GTATCC 2 cut(s) 436, 1690
BclI TGATCA 1 cut(s) 85
BcoDI GTCTC 4 cut(s) 195, 812, 1148, 2112
BfaI CTAG 4 cut(s) 50, 614, 1466, 1674
BfmI CTRYAG 7 cut(s) 411, 417, 759, 1451, 1521, 2181, 2493
BfrI CTTAAG 1 cut(s) 1135
BfuAI ACCTGC 1 cut(s) 1944
BfuI GTATCC 2 cut(s) 436, 1690
BisI GCNGC 4 cut(s) 12, 63, 411, 414
BlsI GCNGC 4 cut(s) 13, 64, 412, 415
BmcAI AGTACT 1 cut(s) 433
Bme1390I CCNGG 2 cut(s) 283, 2713
Bme18I GGWCC 6 cut(s) 754, 1956, 2128, 2158, 2328, 2578
BmeRI GACNNNNNGTC 1 cut(s) 2218
BmeT110I CYCGRG 3 cut(s) 1039, 1086, 2519
BmgBI CACGTC 1 cut(s) 850
BmgT120I GGNCC 6 cut(s) 754, 1956, 2128, 2158, 2328, 2578
BmiI GGNNCC 7 cut(s) 290, 464, 756, 830, 1471, 2277, 2329
BmrFI CCNGG 2 cut(s) 283, 2713
BmrI ACTGGG 3 cut(s) 545, 679, 1590
BmuI ACTGGG 3 cut(s) 545, 679, 1590
BpiI GAAGAC 6 cut(s) 468, 611, 708, 945, 1143, 2214
BplI GAGNNNNNCTC 2 cut(s) 1804, 1836
BpmI CTGGAG 1 cut(s) 815
Bpu14I TTCGAA 1 cut(s) 657
BsaBI GATNNNNATC 1 cut(s) 1244
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 1148
BsaJI CCNNGG 4 cut(s) 579, 2092, 2663, 2712
Bsc4I CCNNNNNNNGG 3 cut(s) 585, 868, 2409
Bse1I ACTGG 4 cut(s) 540, 685, 1585, 2271
Bse3DI GCAATG 3 cut(s) 1295, 2366, 2558
Bse8I GATNNNNATC 1 cut(s) 1244
BseBI CCWGG 2 cut(s) 283, 2713
BseDI CCNNGG 4 cut(s) 579, 2092, 2663, 2712
BseJI GATNNNNATC 1 cut(s) 1244
BseLI CCNNNNNNNGG 3 cut(s) 585, 868, 2409
BseMI GCAATG 3 cut(s) 1295, 2366, 2558
BseMII CTCAG 2 cut(s) 429, 1821
BseNI ACTGG 4 cut(s) 540, 685, 1585, 2271
BseRI GAGGAG 1 cut(s) 2138
BseSI GKGCMC 1 cut(s) 1588
BseXI GCAGC 3 cut(s) 74, 397, 425
BseYI CCCAGC 1 cut(s) 1477
Bsh1236I CGCG 3 cut(s) 249, 362, 1124
Bsh1285I CGRYCG 1 cut(s) 1128
BshFI GGCC 1 cut(s) 209
BshNI GGYRCC 2 cut(s) 828, 2275
BsiEI CGRYCG 1 cut(s) 1128
BsiHKAI GWGCWC 1 cut(s) 1181
BsiHKCI CYCGRG 3 cut(s) 1039, 1086, 2519
BslFI GGGAC 3 cut(s) 740, 884, 1736
BslI CCNNNNNNNGG 3 cut(s) 585, 868, 2409
BsmAI GTCTC 4 cut(s) 195, 812, 1148, 2112
BsmBI CGTCTC 1 cut(s) 2112
BsmFI GGGAC 3 cut(s) 740, 884, 1736
BsmI GAATGC 2 cut(s) 665, 1034
BsnI GGCC 1 cut(s) 209
Bso31I GGTCTC 1 cut(s) 1148
BsoBI CYCGRG 3 cut(s) 1039, 1086, 2519
Bsp119I TTCGAA 1 cut(s) 657
Bsp1286I GDGCHC 3 cut(s) 1181, 1395, 1588
Bsp1407I TGTACA 1 cut(s) 1549
Bsp68I TCGCGA 1 cut(s) 1124
BspACI CCGC 5 cut(s) 74, 362, 470, 1858, 2167
BspANI GGCC 1 cut(s) 209
BspCNI CTCAG 2 cut(s) 430, 1822
BspFNI CGCG 3 cut(s) 249, 362, 1124
BspHI TCATGA 2 cut(s) 120, 2536
BspLI GGNNCC 7 cut(s) 290, 464, 756, 830, 1471, 2277, 2329
BspMAI CTGCAG 2 cut(s) 415, 763
BspMI ACCTGC 1 cut(s) 1944
BspPI GGATC 6 cut(s) 604, 1367, 1464, 1477, 2475, 2664
BspT104I TTCGAA 1 cut(s) 657
BspT107I GGYRCC 2 cut(s) 828, 2275
BspTI CTTAAG 1 cut(s) 1135
BspTNI GGTCTC 1 cut(s) 1148
BsrDI GCAATG 3 cut(s) 1295, 2366, 2558
BsrGI TGTACA 1 cut(s) 1549
BsrI ACTGG 4 cut(s) 540, 685, 1585, 2271
BssECI CCNNGG 4 cut(s) 579, 2092, 2663, 2712
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 2092, 2663
Bst2UI CCWGG 2 cut(s) 283, 2713
Bst4CI ACNGT 5 cut(s) 149, 679, 993, 1183, 1647
Bst6I CTCTTC 4 cut(s) 29, 744, 928, 958
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 1135
BstAUI TGTACA 1 cut(s) 1549
BstBI TTCGAA 1 cut(s) 657
BstC8I GCNNGC 2 cut(s) 159, 193
BstDEI CTNAG 5 cut(s) 133, 438, 710, 1155, 1830
BstDSI CCRYGG 1 cut(s) 579
BstENI CCTNNNNNAGG 1 cut(s) 2407
BstFNI CGCG 3 cut(s) 249, 362, 1124
BstHHI GCGC 1 cut(s) 1245
BstMAI GTCTC 4 cut(s) 195, 812, 1148, 2112
BstMCI CGRYCG 1 cut(s) 1128
BstMWI GCNNNNNNNGC 4 cut(s) 71, 188, 374, 1130
BstNI CCWGG 2 cut(s) 283, 2713
BstNSI RCATGY 4 cut(s) 532, 1385, 1450, 1485
BstSCI CCNGG 2 cut(s) 281, 2711
BstSFI CTRYAG 7 cut(s) 411, 417, 759, 1451, 1521, 2181, 2493
BstSLI GKGCMC 1 cut(s) 1588
BstUI CGCG 3 cut(s) 249, 362, 1124
BstV1I GCAGC 3 cut(s) 74, 397, 425
BstV2I GAAGAC 6 cut(s) 468, 611, 708, 945, 1143, 2214
BstX2I RGATCY 2 cut(s) 1469, 2467
BstYI RGATCY 2 cut(s) 1469, 2467
BsuI GTATCC 2 cut(s) 436, 1690
BsuRI GGCC 1 cut(s) 209
BtgI CCRYGG 1 cut(s) 579
BtgZI GCGATG 1 cut(s) 2522
BtrI CACGTC 1 cut(s) 850
BtuMI TCGCGA 1 cut(s) 1124
BveI ACCTGC 1 cut(s) 1944
Cac8I GCNNGC 2 cut(s) 159, 193
CaiI CAGNNNCTG 1 cut(s) 112
CciI TCATGA 2 cut(s) 120, 2536
CfoI GCGC 1 cut(s) 1245
Cfr13I GGNCC 6 cut(s) 754, 1956, 2128, 2158, 2328, 2578
CseI GACGC 2 cut(s) 320, 2222
Csp6I GTAC 5 cut(s) 432, 458, 829, 1550, 2276
CviQI GTAC 5 cut(s) 432, 458, 829, 1550, 2276
DdeI CTNAG 5 cut(s) 133, 438, 710, 1155, 1830
DraI TTTAAA 2 cut(s) 1797, 1806
DraIII CACNNNGTG 1 cut(s) 1356
DriI GACNNNNNGTC 1 cut(s) 2218
EaeI YGGCCR 1 cut(s) 207
Eam1104I CTCTTC 4 cut(s) 29, 744, 928, 958
Eam1105I GACNNNNNGTC 1 cut(s) 2218
EarI CTCTTC 4 cut(s) 29, 744, 928, 958
Eco130I CCWWGG 2 cut(s) 2092, 2663
Eco24I GRGCYC 1 cut(s) 1395
Eco31I GGTCTC 1 cut(s) 1148
Eco32I GATATC 1 cut(s) 401
Eco47I GGWCC 6 cut(s) 754, 1956, 2128, 2158, 2328, 2578
Eco57I CTGAAG 3 cut(s) 1338, 1386, 1850
Eco88I CYCGRG 3 cut(s) 1039, 1086, 2519
EcoNI CCTNNNNNAGG 1 cut(s) 2407
EcoO109I RGGNCCY 4 cut(s) 754, 2128, 2158, 2578
EcoRI GAATTC 2 cut(s) 728, 2532
EcoRII CCWGG 2 cut(s) 281, 2711
EcoRV GATATC 1 cut(s) 401
EcoT14I CCWWGG 2 cut(s) 2092, 2663
EcoT22I ATGCAT 2 cut(s) 670, 1494
EcoT38I GRGCYC 1 cut(s) 1395
ErhI CCWWGG 2 cut(s) 2092, 2663
Esp3I CGTCTC 1 cut(s) 2112
FalI AAGNNNNNCTT 4 cut(s) 693, 725, 1277, 1309
FaqI GGGAC 3 cut(s) 740, 884, 1736
FauI CCCGC 2 cut(s) 67, 2174
FbaI TGATCA 1 cut(s) 85
FblI GTMKAC 2 cut(s) 1114, 1185
Fnu4HI GCNGC 4 cut(s) 12, 63, 411, 414
FriOI GRGCYC 1 cut(s) 1395
Fsp4HI GCNGC 4 cut(s) 12, 63, 411, 414
FspAI RTGCGCAY 1 cut(s) 1244
FspBI CTAG 4 cut(s) 50, 614, 1466, 1674
FspI TGCGCA 1 cut(s) 1244
GlaI GCGC 1 cut(s) 1244
GluI GCNGC 4 cut(s) 12, 63, 411, 414
GsaI CCCAGC 1 cut(s) 1481
GsuI CTGGAG 1 cut(s) 815
HaeIII GGCC 1 cut(s) 209
HgaI GACGC 2 cut(s) 320, 2222
HhaI GCGC 1 cut(s) 1245
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 1 cut(s) 1243
HinP1I GCGC 1 cut(s) 1243
HincII GTYRAC 1 cut(s) 2212
HindII GTYRAC 1 cut(s) 2212
HindIII AAGCTT 1 cut(s) 2444
HinfI GANTC 9 cut(s) 473, 624, 915, 985, 1841, 2039, 2230, 2317, 2633
HphI GGTGA 4 cut(s) 817, 1016, 1056, 1574
Hpy166II GTNNAC 9 cut(s) 808, 862, 979, 1064, 1115, 1186, 1307, 2212, 2294
Hpy8I GTNNAC 9 cut(s) 808, 862, 979, 1064, 1115, 1186, 1307, 2212, 2294
Hpy99I CGWCG 2 cut(s) 336, 2681
HpyCH4III ACNGT 5 cut(s) 149, 679, 993, 1183, 1647
HpyCH4IV ACGT 5 cut(s) 5, 849, 1781, 2087, 2380
HpyF10VI GCNNNNNNNGC 4 cut(s) 71, 188, 374, 1130
HpyF3I CTNAG 5 cut(s) 133, 438, 710, 1155, 1830
HpySE526I ACGT 5 cut(s) 5, 849, 1781, 2087, 2380
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 1 cut(s) 1243
KpnI GGTACC 2 cut(s) 832, 2279
Ksp22I TGATCA 1 cut(s) 85
LmnI GCTCC 4 cut(s) 109, 1015, 1176, 1860
Lsp1109I GCAGC 3 cut(s) 74, 397, 425
MaeI CTAG 4 cut(s) 50, 614, 1466, 1674
MaeII ACGT 5 cut(s) 5, 849, 1781, 2087, 2380
MaeIII GTNAC 4 cut(s) 348, 531, 1161, 1442
MfeI CAATTG 2 cut(s) 1755, 1974
MflI RGATCY 2 cut(s) 1469, 2467
MhlI GDGCHC 3 cut(s) 1181, 1395, 1588
MlsI TGGCCA 1 cut(s) 209
MluNI TGGCCA 1 cut(s) 209
MlyI GAGTC 4 cut(s) 482, 924, 2224, 2642
MmeI TCCRAC 1 cut(s) 975
Mox20I TGGCCA 1 cut(s) 209
Mph1103I ATGCAT 2 cut(s) 670, 1494
MroXI GAANNNNTTC 3 cut(s) 128, 1034, 2202
MscI TGGCCA 1 cut(s) 209
MseI TTAA 9 cut(s) 102, 1136, 1167, 1196, 1263, 1719, 1796, 1805, 2480
Msp20I TGGCCA 1 cut(s) 209
MspA1I CMGCKG 1 cut(s) 416
MspCI CTTAAG 1 cut(s) 1135
MspR9I CCNGG 2 cut(s) 283, 2713
MunI CAATTG 2 cut(s) 1755, 1974
Mva1269I GAATGC 2 cut(s) 665, 1034
MvaI CCWGG 2 cut(s) 283, 2713
MvnI CGCG 3 cut(s) 249, 362, 1124
MwoI GCNNNNNNNGC 4 cut(s) 71, 188, 374, 1130
NlaIV GGNNCC 7 cut(s) 290, 464, 756, 830, 1471, 2277, 2329
NmuCI GTSAC 1 cut(s) 1161
NruI TCGCGA 1 cut(s) 1124
NsbI TGCGCA 1 cut(s) 1244
NsiI ATGCAT 2 cut(s) 670, 1494
NspI RCATGY 4 cut(s) 532, 1385, 1450, 1485
NspV TTCGAA 1 cut(s) 657
PaeR7I CTCGAG 2 cut(s) 1039, 2519
PagI TCATGA 2 cut(s) 120, 2536
PciI ACATGT 2 cut(s) 528, 1381
PctI GAATGC 2 cut(s) 665, 1034
PdmI GAANNNNTTC 3 cut(s) 128, 1034, 2202
PfeI GAWTC 5 cut(s) 624, 985, 1841, 2039, 2317
PkrI GCNGC 4 cut(s) 13, 64, 412, 415
Ple19I CGATCG 1 cut(s) 1128
PleI GAGTC 4 cut(s) 481, 923, 2224, 2641
PpsI GAGTC 4 cut(s) 481, 923, 2224, 2641
PpuMI RGGWCCY 4 cut(s) 754, 2128, 2158, 2578
PscI ACATGT 2 cut(s) 528, 1381
PsiI TTATAA 1 cut(s) 783
Psp5II RGGWCCY 4 cut(s) 754, 2128, 2158, 2578
Psp6I CCWGG 2 cut(s) 281, 2711
PspFI CCCAGC 1 cut(s) 1477
PspGI CCWGG 2 cut(s) 281, 2711
PspN4I GGNNCC 7 cut(s) 290, 464, 756, 830, 1471, 2277, 2329
PspPI GGNCC 6 cut(s) 754, 1956, 2128, 2158, 2328, 2578
PspPPI RGGWCCY 4 cut(s) 754, 2128, 2158, 2578
PsrI GAACNNNNNNTAC 2 cut(s) 1810, 1842
PstI CTGCAG 2 cut(s) 415, 763
PstNI CAGNNNCTG 1 cut(s) 112
PsuI RGATCY 2 cut(s) 1469, 2467
PvuI CGATCG 1 cut(s) 1128
PvuII CAGCTG 1 cut(s) 416
RruI TCGCGA 1 cut(s) 1124
RsaI GTAC 5 cut(s) 433, 459, 830, 1551, 2277
RsaNI GTAC 5 cut(s) 432, 458, 829, 1550, 2276
SaqAI TTAA 9 cut(s) 102, 1136, 1167, 1196, 1263, 1719, 1796, 1805, 2480
SatI GCNGC 4 cut(s) 12, 63, 411, 414
Sau96I GGNCC 6 cut(s) 754, 1956, 2128, 2158, 2328, 2578
ScaI AGTACT 1 cut(s) 433
SchI GAGTC 4 cut(s) 482, 924, 2224, 2642
ScrFI CCNGG 2 cut(s) 283, 2713
SduI GDGCHC 3 cut(s) 1181, 1395, 1588
SfcI CTRYAG 7 cut(s) 411, 417, 759, 1451, 1521, 2181, 2493
Sfr274I CTCGAG 2 cut(s) 1039, 2519
SfuI TTCGAA 1 cut(s) 657
SinI GGWCC 6 cut(s) 754, 1956, 2128, 2158, 2328, 2578
SlaI CTCGAG 2 cut(s) 1039, 2519
SmiI ATTTAAAT 1 cut(s) 1806
SmlI CTYRAG 3 cut(s) 1039, 1135, 2519
SmoI CTYRAG 3 cut(s) 1039, 1135, 2519
SsiI CCGC 5 cut(s) 74, 362, 470, 1858, 2167
SspI AATATT 2 cut(s) 1802, 2053
SspMI CTAG 4 cut(s) 50, 614, 1466, 1674
StyD4I CCNGG 2 cut(s) 281, 2711
StyI CCWWGG 2 cut(s) 2092, 2663
SwaI ATTTAAAT 1 cut(s) 1806
TaaI ACNGT 5 cut(s) 149, 679, 993, 1183, 1647
TaiI ACGT 5 cut(s) 8, 852, 1784, 2090, 2383
TatI WGTACW 2 cut(s) 431, 1549
TfiI GAWTC 5 cut(s) 624, 985, 1841, 2039, 2317
Tru1I TTAA 9 cut(s) 102, 1136, 1167, 1196, 1263, 1719, 1796, 1805, 2480
Tru9I TTAA 9 cut(s) 102, 1136, 1167, 1196, 1263, 1719, 1796, 1805, 2480
TseFI GTSAC 1 cut(s) 1161
TseI GCWGC 4 cut(s) 11, 62, 410, 413
Tsp45I GTSAC 1 cut(s) 1161
TspGWI ACGGA 4 cut(s) 475, 568, 1580, 2242
Vha464I CTTAAG 1 cut(s) 1135
VpaK11BI GGWCC 6 cut(s) 754, 1956, 2128, 2158, 2328, 2578
XagI CCTNNNNNAGG 1 cut(s) 2407
XapI RAATTY 5 cut(s) 35, 728, 1807, 2198, 2532
XbaI TCTAGA 1 cut(s) 49
XceI RCATGY 4 cut(s) 532, 1385, 1450, 1485
XcmI CCANNNNNNNNNTGG 1 cut(s) 318
XhoI CTCGAG 2 cut(s) 1039, 2519
XmiI GTMKAC 2 cut(s) 1114, 1185
XmnI GAANNNNTTC 3 cut(s) 128, 1034, 2202
XspI CTAG 4 cut(s) 50, 614, 1466, 1674
ZraI GACGTC 1 cut(s) 6
ZrmI AGTACT 1 cut(s) 433
Zsp2I ATGCAT 2 cut(s) 670, 1494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.