FvH4_1g08223

Domain of unknown function (DUF4539)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000118
Physical Location & Seq
Reverse (-)
4355955 .. 4360166
4212 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g08223.t1

Sequence Viewer

Length: 1584 bp
ATGGAGTTGAGACCGACAGTGTTCAAGGCGCCGGAGGCGAATGACGTGTTCAGGGCAGTCAAATCGGCTGGGGTGAAGATCGTTCTAGAAGACGTCACAACCGCCCTCACGATCATTGAGAAGTTCCAACAATACAAGCAATGTTTTTGGTCACTAATGACCCTAGAGATCAGCTCTGCGATCAAAAGAGAGCTTCGAAAATCTAGGAATGTGATCGACGTCGACTTGATTGGACAATTTGTCGACTATCTTGAGTCGACGGTGGAGGAAGGTCAGGAGAAGGAGGAGGAGGAGGAGAATAAGGAAGAGAAGGCGGAGGATTCAGACAAGGAGGAGGGTGGTTCGGACGAGGAGGAGTATACGTCGGAGGAAGATGTGGAAGATTCGGATGGCTCGGAGTCGGAAGAGATAGTAGATTCGGATGAGGAATGGGAGGAGGATTCCGATGATGATGTGGCGGCCGTGACGGAGGGGAAAAAGGAGGTGGTGATAAGTAGTGAGGAGATAGAGAAGGAGATGGGATTGATGGTGAAACCAGGGCAGGAGGGGGAGATTCTGGATAAGATGTATCCCTACATTCGTGGAGGACGCCCGTATCGCCGGTCAATCAGATTTTTCATGAAAAGGGTGAGAGAGCATATGGATAGGTCTTCCACCCTCGACGATTTGAAGACGGTGGAGGCCGCCCTCAAGAGTAGCATTTTTGATGATGTATATGGTGACTATAAAATTGTGAACAACCCTAGTACCATTATGGAGGAAGATATGGCTGATGCCAAGGACCCTGTTAATCAACAGTCTGTTTTAGATACGGACGTCCGCACCATCTTAAGGTGTGGATTTCCCTCCGTTCGCCACTGTACGGCGCCGGCAAGGGCGCGCCTCCACCCCAGCGGACTCCAGCAGCTTCCCCGACCACTTTTCCTCCCCGGTGAGTCCGCCGAATTCCAGTTTTCCGGTCAGATTACCCAAAACTTCAAACAAAGTCAATCTGGCAGGAAAACTGGAATTCGGCCGACTCGCCGGGGATGGAAAGTGGTCGGGGAAGTTGCTGGAGTCTGCTGGGGTAGAGGCGCCCCCTCGCCGACACCATACGGACGTCCGCATCGCCTTAAAGTGTGGACGTCCCTCCGTTCGCCACCGTATGGCGTTGGCGAGGGCGCGCCTCCACCCCAGCAGCGTCCCCGACCACTTTCCCTTCCCGGCGAGTCCGCCGAATTCCAGTTTTCCGGCCAGATCACCCAAAACTTCAAACAAAATCAATCTGGCCGGAAAACTGGAATTCAGCAGACTCGCTGGGAATGGAAAATGGTCGAGGAAGCTGCTGGAGTCCGCTGGGGTGGAGACGCGCCCTCGCCGGTGCCGTACGGTGGCGAAAGGAGGGACGTCCGCACTTTAAGAGCCGTGCGGACGTCCGCACCTGATACTGAGCTCAGACTGGCTGAAGAGGACAATTCATCGAGCATCAGCCAGGTCATTAGTGGTTCAGCTAAGATTCCTGATAACCATGGAAGAATAACAGGAGCAAAAAGAGCAAGGCAGCCACTGTTAAGAATTGTGAAAGTCTGGACTGTTAGAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4539

Protein Analysis

528

Amino Acids

59.32

Weight (kDa)

5.09

Isoelectric Point (pI)

60.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000118)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01361 FvH4_1g07161 FvH4_1g07431 FvH4_1g07821 FvH4_1g08223 FvH4_1g10041 FvH4_1g12132 FvH4_1g15053 FvH4_1g18161 FvH4_1g18400 FvH4_1g18931 FvH4_1g19242 FvH4_1g19461 FvH4_1g20550 FvH4_1g21381 FvH4_1g21542 FvH4_1g22102 FvH4_1g23991 FvH4_1g24542 FvH4_1g24951 FvH4_1g24960 FvH4_1g25272 FvH4_1g25552 FvH4_1g25771 FvH4_1g28771 FvH4_1g29201 FvH4_1g29611 FvH4_2g01181 FvH4_2g02491 FvH4_2g04621 FvH4_2g04631 FvH4_2g07460 FvH4_2g08540 FvH4_2g08550 FvH4_2g09292 FvH4_2g10501 FvH4_2g12101 FvH4_2g12220 FvH4_2g12551 FvH4_2g14071 FvH4_2g14241 FvH4_2g15041 FvH4_2g15311 FvH4_2g18971 FvH4_2g19220 FvH4_2g19260 FvH4_2g19611 FvH4_2g19652 FvH4_2g20211 FvH4_2g20231 FvH4_2g21541 FvH4_2g22380 FvH4_2g27712 FvH4_2g28171 FvH4_2g29879 FvH4_2g32391 FvH4_3g02171 FvH4_3g05531 FvH4_3g09750 FvH4_3g10310 FvH4_3g10460 FvH4_3g13172 FvH4_3g15232 FvH4_3g18481 FvH4_3g18621 FvH4_3g20504 FvH4_3g20812 FvH4_3g22320 FvH4_3g22930 FvH4_3g22940 FvH4_3g23752 FvH4_3g24791 FvH4_3g26411 FvH4_3g26432 FvH4_3g27201 FvH4_3g27862 FvH4_3g28871 FvH4_3g28954 FvH4_3g29131 FvH4_3g29832 FvH4_3g29922 FvH4_3g30190 FvH4_3g32231 FvH4_3g32250 FvH4_3g33460 FvH4_3g34670 FvH4_3g36982 FvH4_3g37001 FvH4_3g38252 FvH4_3g38772 FvH4_3g40141 FvH4_3g40181 FvH4_3g42521 FvH4_4g00090 FvH4_4g00290 FvH4_4g00301 FvH4_4g00530 FvH4_4g00823 FvH4_4g02300 FvH4_4g02450 FvH4_4g03360 FvH4_4g04481 FvH4_4g04761 FvH4_4g06301 FvH4_4g06630 FvH4_4g08312 FvH4_4g08552 FvH4_4g10053 FvH4_4g11971 FvH4_4g13211 FvH4_4g13511 FvH4_4g15351 FvH4_4g16360 FvH4_4g16601 FvH4_4g18462 FvH4_4g22911 FvH4_4g23221 FvH4_4g24301 FvH4_4g24721 FvH4_4g27905 FvH4_4g28971 FvH4_4g29540 FvH4_4g30720 FvH4_4g31521 FvH4_4g33371 FvH4_4g34111 FvH4_4g35740 FvH4_5g00131 FvH4_5g02530 FvH4_5g02550 FvH4_5g02560 FvH4_5g02580 FvH4_5g03783 FvH4_5g05681 FvH4_5g05681 FvH4_5g09371 FvH4_5g09381 FvH4_5g14611 FvH4_5g15341 FvH4_5g19801 FvH4_5g20110 FvH4_5g20911 FvH4_5g22230 FvH4_5g25751 FvH4_5g26070 FvH4_5g26471 FvH4_5g27072 FvH4_5g27471 FvH4_5g27471 FvH4_5g27998 FvH4_5g28291 FvH4_5g30951 FvH4_5g31082 FvH4_5g31890 FvH4_5g32251 FvH4_5g34112 FvH4_5g37184 FvH4_5g37993 FvH4_5g38271 FvH4_6g00153 FvH4_6g00640 FvH4_6g05921 FvH4_6g08591 FvH4_6g09511 FvH4_6g10331 FvH4_6g10401 FvH4_6g14161 FvH4_6g14171 FvH4_6g18481 FvH4_6g19721 FvH4_6g19980 FvH4_6g20104 FvH4_6g20112 FvH4_6g21261 FvH4_6g21651 FvH4_6g22051 FvH4_6g23141 FvH4_6g24822 FvH4_6g25082 FvH4_6g25391 FvH4_6g25560 FvH4_6g26350 FvH4_6g27031 FvH4_6g27810 FvH4_6g27971 FvH4_6g28331 FvH4_6g29391 FvH4_6g30781 FvH4_6g32221 FvH4_6g34680 FvH4_6g36181 FvH4_6g36551 FvH4_6g37491 FvH4_6g37663 FvH4_6g39590 FvH4_6g40582 FvH4_6g43843 FvH4_6g50551 FvH4_7g00240 FvH4_7g00731 FvH4_7g01031 FvH4_7g03301 FvH4_7g08180 FvH4_7g08180 FvH4_7g10631 FvH4_7g19710 FvH4_7g23892 FvH4_7g25280 FvH4_7g25551 FvH4_7g30121 FvH4_7g31931 FvH4_7g32672 FvH4_c21g00040 FvH4_c2g00053
prunus_persica Prupe.1G448800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322451 RchiOBHm_Chr5g0015171
rosa_laevigata RLG00000003077 RLG00000018186 RLG00000030343
rosa_multiflora Rmu_co8096726.1_g000001
rosa_roxburghii Rroxscaffold_157G00438380 Rroxscaffold_1G00001730 Rroxscaffold_3G00236310
rosa_rugosa Rorug02G0236500
rosa_samantha Rh4BG247300 Rh6BG286200 Rh6CG287300 Rh7DG257500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 7 cut(s) 96, 222, 819, 1102, 1127, 1389, 1415
AccB1I GGYRCC 4 cut(s) 28, 865, 1073, 1360
AccB7I CCANNNNNTGG 1 cut(s) 1145
AccI GTMKAC 4 cut(s) 222, 243, 257, 359
AccII CGCG 3 cut(s) 880, 1163, 1349
AcoI YGGCCR 4 cut(s) 459, 1013, 1231, 1267
AcsI RAATTY 5 cut(s) 944, 1008, 1217, 1281, 1578
AcuI CTGAAG 1 cut(s) 1464
AfaI GTAC 3 cut(s) 748, 862, 1367
AfiI CCNNNNNNNGG 4 cut(s) 831, 862, 1145, 1370
AflII CTTAAG 1 cut(s) 829
AflIII ACRYGT 1 cut(s) 45
AgsI TTSAA 4 cut(s) 25, 670, 979, 1252
AhdI GACNNNNNGTC 1 cut(s) 239
AjiI CACGTC 1 cut(s) 46
AjnI CCWGG 2 cut(s) 535, 1470
AluBI AGCT 6 cut(s) 174, 193, 907, 1322, 1432, 1490
AluI AGCT 6 cut(s) 174, 193, 907, 1322, 1432, 1490
Alw21I GWGCWC 1 cut(s) 1434
Alw26I GTCTC 2 cut(s) 4, 1338
AlwNI CAGNNNCTG 1 cut(s) 1546
AoxI GGCC 5 cut(s) 459, 681, 1013, 1231, 1267
ApeKI GCWGC 4 cut(s) 904, 1177, 1322, 1540
ApoI RAATTY 5 cut(s) 944, 1008, 1217, 1281, 1578
AscI GGCGCGCC 2 cut(s) 878, 1161
AspLEI GCGC 8 cut(s) 31, 868, 880, 882, 1076, 1163, 1165, 1351
AspS9I GGNCC 1 cut(s) 781
AsuC2I CCSGG 3 cut(s) 930, 1025, 1203
AsuHPI GGTGA 7 cut(s) 85, 499, 541, 640, 731, 944, 1231
AsuII TTCGAA 1 cut(s) 196
AvaII GGWCC 1 cut(s) 781
BaeI ACNNNNGTAYC 6 cut(s) 578, 611, 730, 763, 801, 834
BanI GGYRCC 4 cut(s) 28, 865, 1073, 1360
BanII GRGCYC 1 cut(s) 1434
BbsI GAAGAC 3 cut(s) 96, 642, 677
Bbv12I GWGCWC 1 cut(s) 1434
BbvI GCAGC 4 cut(s) 916, 1189, 1309, 1552
BccI CCATC 5 cut(s) 383, 511, 520, 833, 1023
BceAI ACGGC 4 cut(s) 446, 879, 1348, 1388
BcgI CGANNNNNNTGC 4 cut(s) 45, 79, 1304, 1338
BciT130I CCWGG 2 cut(s) 537, 1472
BciVI GTATCC 1 cut(s) 579
BcnI CCSGG 3 cut(s) 930, 1025, 1203
BcoDI GTCTC 2 cut(s) 4, 1338
BfaI CTAG 4 cut(s) 86, 164, 204, 744
BfoI RGCGCY 3 cut(s) 32, 869, 1077
BfrI CTTAAG 1 cut(s) 829
BfuI GTATCC 1 cut(s) 579
BisI GCNGC 6 cut(s) 459, 684, 905, 1178, 1323, 1541
BlsI GCNGC 6 cut(s) 460, 685, 906, 1179, 1324, 1542
Bme1390I CCNGG 5 cut(s) 537, 930, 1025, 1203, 1472
Bme18I GGWCC 1 cut(s) 781
BmeRI GACNNNNNGTC 1 cut(s) 239
BmgBI CACGTC 1 cut(s) 46
BmgT120I GGNCC 1 cut(s) 781
BmiI GGNNCC 5 cut(s) 30, 783, 867, 1075, 1362
BmrFI CCNGG 5 cut(s) 537, 930, 1025, 1203, 1472
BmsI GCATC 3 cut(s) 763, 1114, 1473
BpiI GAAGAC 3 cut(s) 96, 642, 677
BplI GAGNNNNNCTC 2 cut(s) 158, 190
BpmI CTGGAG 3 cut(s) 884, 1074, 1347
Bpu14I TTCGAA 1 cut(s) 196
BpuEI CTTGAG 2 cut(s) 272, 674
BpuMI CCSGG 3 cut(s) 930, 1025, 1203
BsaI GGTCTC 1 cut(s) 4
BsaJI CCNNGG 5 cut(s) 536, 777, 928, 1024, 1507
BsaWI WCCGGW 1 cut(s) 956
BsaXI ACNNNNNCTCC 4 cut(s) 347, 377, 909, 939
Bsc4I CCNNNNNNNGG 4 cut(s) 831, 862, 1145, 1370
Bse118I RCCGGY 3 cut(s) 600, 868, 1357
Bse1I ACTGG 5 cut(s) 949, 1009, 1222, 1282, 1443
Bse3DI GCAATG 1 cut(s) 146
BseBI CCWGG 2 cut(s) 537, 1472
BseDI CCNNGG 5 cut(s) 536, 777, 928, 1024, 1507
BseGI GGATG 3 cut(s) 394, 427, 1034
BseLI CCNNNNNNNGG 4 cut(s) 831, 862, 1145, 1370
BseMI GCAATG 1 cut(s) 146
BseMII CTCAG 2 cut(s) 1419, 1447
BseNI ACTGG 5 cut(s) 949, 1009, 1222, 1282, 1443
BsePI GCGCGC 2 cut(s) 878, 1161
BseRI GAGGAG 9 cut(s) 299, 302, 305, 308, 347, 365, 368, 449, 515
BseX3I CGGCCG 2 cut(s) 459, 1013
BseXI GCAGC 4 cut(s) 916, 1189, 1309, 1552
BseYI CCCAGC 6 cut(s) 68, 890, 1062, 1173, 1296, 1335
Bsh1236I CGCG 3 cut(s) 880, 1163, 1349
Bsh1285I CGRYCG 2 cut(s) 462, 1016
BshFI GGCC 5 cut(s) 461, 683, 1015, 1233, 1269
BshNI GGYRCC 4 cut(s) 28, 865, 1073, 1360
BsiEI CGRYCG 2 cut(s) 462, 1016
BsiHKAI GWGCWC 1 cut(s) 1434
BsiWI CGTACG 1 cut(s) 1365
BslFI GGGAC 3 cut(s) 1111, 1167, 1397
BslI CCNNNNNNNGG 4 cut(s) 831, 862, 1145, 1370
BsmAI GTCTC 2 cut(s) 4, 1338
BsmBI CGTCTC 1 cut(s) 1338
BsmFI GGGAC 3 cut(s) 1111, 1167, 1397
BsnI GGCC 5 cut(s) 461, 683, 1015, 1233, 1269
Bso31I GGTCTC 1 cut(s) 4
Bsp119I TTCGAA 1 cut(s) 196
Bsp1286I GDGCHC 1 cut(s) 1434
Bsp143I GATC 6 cut(s) 78, 111, 168, 180, 213, 1236
Bsp19I CCATGG 1 cut(s) 1507
BspANI GGCC 5 cut(s) 461, 683, 1015, 1233, 1269
BspCNI CTCAG 2 cut(s) 1420, 1446
BspFNI CGCG 3 cut(s) 880, 1163, 1349
BspHI TCATGA 1 cut(s) 618
BspLI GGNNCC 5 cut(s) 30, 783, 867, 1075, 1362
BspT104I TTCGAA 1 cut(s) 196
BspT107I GGYRCC 4 cut(s) 28, 865, 1073, 1360
BspTI CTTAAG 1 cut(s) 829
BspTNI GGTCTC 1 cut(s) 4
BsrDI GCAATG 1 cut(s) 146
BsrFI RCCGGY 3 cut(s) 600, 868, 1357
BsrI ACTGG 5 cut(s) 949, 1009, 1222, 1282, 1443
BssAI RCCGGY 3 cut(s) 600, 868, 1357
BssECI CCNNGG 5 cut(s) 536, 777, 928, 1024, 1507
BssHII GCGCGC 2 cut(s) 878, 1161
BssMI GATC 6 cut(s) 78, 111, 168, 180, 213, 1236
BssNAI GTATAC 1 cut(s) 360
BssT1I CCWWGG 2 cut(s) 777, 1507
Bst1107I GTATAC 1 cut(s) 360
Bst2UI CCWGG 2 cut(s) 537, 1472
Bst4CI ACNGT 9 cut(s) 19, 262, 676, 798, 860, 1143, 1370, 1548, 1573
Bst6I CTCTTC 3 cut(s) 300, 399, 1440
BstAFI CTTAAG 1 cut(s) 829
BstBI TTCGAA 1 cut(s) 196
BstC8I GCNNGC 3 cut(s) 870, 880, 1163
BstDEI CTNAG 3 cut(s) 1428, 1433, 1491
BstDSI CCRYGG 1 cut(s) 1507
BstF5I GGATG 3 cut(s) 394, 427, 1034
BstFNI CGCG 3 cut(s) 880, 1163, 1349
BstH2I RGCGCY 3 cut(s) 32, 869, 1077
BstHHI GCGC 8 cut(s) 31, 868, 880, 882, 1076, 1163, 1165, 1351
BstKTI GATC 6 cut(s) 81, 114, 171, 183, 216, 1239
BstMAI GTCTC 2 cut(s) 4, 1338
BstMBI GATC 6 cut(s) 78, 111, 168, 180, 213, 1236
BstMCI CGRYCG 2 cut(s) 462, 1016
BstMWI GCNNNNNNNGC 3 cut(s) 35, 597, 1532
BstNI CCWGG 2 cut(s) 537, 1472
BstSCI CCNGG 5 cut(s) 535, 928, 1023, 1201, 1470
BstUI CGCG 3 cut(s) 880, 1163, 1349
BstV1I GCAGC 4 cut(s) 916, 1189, 1309, 1552
BstV2I GAAGAC 3 cut(s) 96, 642, 677
BstZ17I GTATAC 1 cut(s) 360
BstZI CGGCCG 2 cut(s) 459, 1013
BsuI GTATCC 1 cut(s) 579
BsuRI GGCC 5 cut(s) 461, 683, 1015, 1233, 1269
BtgI CCRYGG 1 cut(s) 1507
BtgZI GCGATG 1 cut(s) 1091
BtrI CACGTC 1 cut(s) 46
BtsCI GGATG 3 cut(s) 394, 427, 1034
BtsIMutI CAGTG 3 cut(s) 24, 856, 1544
Cac8I GCNNGC 3 cut(s) 870, 880, 1163
CaiI CAGNNNCTG 1 cut(s) 1546
CciI TCATGA 1 cut(s) 618
CfoI GCGC 8 cut(s) 31, 868, 880, 882, 1076, 1163, 1165, 1351
Cfr10I RCCGGY 3 cut(s) 600, 868, 1357
Cfr13I GGNCC 1 cut(s) 781
CseI GACGC 3 cut(s) 597, 1169, 1355
Csp6I GTAC 3 cut(s) 747, 861, 1366
CviAII CATG 2 cut(s) 619, 1508
CviQI GTAC 3 cut(s) 747, 861, 1366
DdeI CTNAG 3 cut(s) 1428, 1433, 1491
DinI GGCGCC 3 cut(s) 30, 867, 1075
DpnI GATC 6 cut(s) 80, 113, 170, 182, 215, 1238
DpnII GATC 6 cut(s) 78, 111, 168, 180, 213, 1236
DriI GACNNNNNGTC 1 cut(s) 239
EaeI YGGCCR 4 cut(s) 459, 1013, 1231, 1267
EagI CGGCCG 2 cut(s) 459, 1013
Eam1104I CTCTTC 3 cut(s) 300, 399, 1440
Eam1105I GACNNNNNGTC 1 cut(s) 239
EarI CTCTTC 3 cut(s) 300, 399, 1440
EciI GGCGGA 3 cut(s) 329, 928, 1201
Ecl136II GAGCTC 1 cut(s) 1432
EclXI CGGCCG 2 cut(s) 459, 1013
Eco130I CCWWGG 2 cut(s) 777, 1507
Eco24I GRGCYC 1 cut(s) 1434
Eco31I GGTCTC 1 cut(s) 4
Eco47I GGWCC 1 cut(s) 781
Eco52I CGGCCG 2 cut(s) 459, 1013
Eco53kI GAGCTC 1 cut(s) 1432
Eco57I CTGAAG 1 cut(s) 1464
EcoICRI GAGCTC 1 cut(s) 1432
EcoO109I RGGNCCY 1 cut(s) 781
EcoRI GAATTC 4 cut(s) 944, 1008, 1217, 1281
EcoRII CCWGG 2 cut(s) 535, 1470
EcoT14I CCWWGG 2 cut(s) 777, 1507
EcoT38I GRGCYC 1 cut(s) 1434
EgeI GGCGCC 3 cut(s) 30, 867, 1075
EheI GGCGCC 3 cut(s) 30, 867, 1075
ErhI CCWWGG 2 cut(s) 777, 1507
Esp3I CGTCTC 1 cut(s) 1338
FaeI CATG 2 cut(s) 622, 1511
FaqI GGGAC 3 cut(s) 1111, 1167, 1397
FatI CATG 2 cut(s) 618, 1507
FauNDI CATATG 1 cut(s) 639
FblI GTMKAC 4 cut(s) 222, 243, 257, 359
Fnu4HI GCNGC 6 cut(s) 459, 684, 905, 1178, 1323, 1541
FokI GGATG 3 cut(s) 401, 434, 1041
FriOI GRGCYC 1 cut(s) 1434
Fsp4HI GCNGC 6 cut(s) 459, 684, 905, 1178, 1323, 1541
FspBI CTAG 4 cut(s) 86, 164, 204, 744
GlaI GCGC 8 cut(s) 30, 867, 879, 881, 1075, 1162, 1164, 1350
GluI GCNGC 6 cut(s) 459, 684, 905, 1178, 1323, 1541
GsaI CCCAGC 6 cut(s) 72, 894, 1066, 1177, 1300, 1339
GsuI CTGGAG 3 cut(s) 884, 1074, 1347
HaeII RGCGCY 3 cut(s) 32, 869, 1077
HaeIII GGCC 5 cut(s) 461, 683, 1015, 1233, 1269
HgaI GACGC 3 cut(s) 597, 1169, 1355
HhaI GCGC 8 cut(s) 31, 868, 880, 882, 1076, 1163, 1165, 1351
Hin1II CATG 2 cut(s) 622, 1511
Hin6I GCGC 8 cut(s) 29, 866, 878, 880, 1074, 1161, 1163, 1349
HinP1I GCGC 8 cut(s) 29, 866, 878, 880, 1074, 1161, 1163, 1349
HincII GTYRAC 3 cut(s) 223, 244, 258
HindII GTYRAC 3 cut(s) 223, 244, 258
HphI GGTGA 7 cut(s) 85, 499, 541, 640, 731, 944, 1231
Hpy166II GTNNAC 6 cut(s) 223, 244, 258, 360, 736, 1122
Hpy188III TCNNGA 9 cut(s) 86, 109, 251, 275, 557, 619, 691, 1499, 1567
Hpy8I GTNNAC 6 cut(s) 223, 244, 258, 360, 736, 1122
Hpy99I CGWCG 5 cut(s) 221, 224, 262, 367, 665
HpyAV CCTTC 5 cut(s) 263, 274, 304, 505, 1208
HpyCH4III ACNGT 9 cut(s) 19, 262, 676, 798, 860, 1143, 1370, 1548, 1573
HpyCH4IV ACGT 9 cut(s) 45, 93, 219, 362, 816, 1099, 1124, 1386, 1412
HpyF10VI GCNNNNNNNGC 3 cut(s) 35, 597, 1532
HpyF3I CTNAG 3 cut(s) 1428, 1433, 1491
HpySE526I ACGT 9 cut(s) 45, 93, 219, 362, 816, 1099, 1124, 1386, 1412
Hsp92II CATG 2 cut(s) 622, 1511
HspAI GCGC 8 cut(s) 29, 866, 878, 880, 1074, 1161, 1163, 1349
KasI GGCGCC 3 cut(s) 28, 865, 1073
KroI GCCGGC 1 cut(s) 868
KroNI GCCGGC 1 cut(s) 870
Kzo9I GATC 6 cut(s) 78, 111, 168, 180, 213, 1236
LmnI GCTCC 1 cut(s) 1523
Lsp1109I GCAGC 4 cut(s) 916, 1189, 1309, 1552
LweI GCATC 3 cut(s) 763, 1114, 1473
MaeI CTAG 4 cut(s) 86, 164, 204, 744
MaeII ACGT 9 cut(s) 45, 93, 219, 362, 816, 1099, 1124, 1386, 1412
MaeIII GTNAC 4 cut(s) 94, 150, 463, 719
MalI GATC 6 cut(s) 80, 113, 170, 182, 215, 1238
MboI GATC 6 cut(s) 78, 111, 168, 180, 213, 1236
MhlI GDGCHC 1 cut(s) 1434
MluCI AATT 9 cut(s) 236, 729, 944, 1008, 1217, 1281, 1453, 1554, 1578
Mly113I GGCGCC 3 cut(s) 29, 866, 1074
MlyI GAGTC 9 cut(s) 263, 407, 891, 944, 1012, 1065, 1217, 1285, 1338
MmeI TCCRAC 3 cut(s) 151, 345, 381
MroNI GCCGGC 1 cut(s) 868
MseI TTAA 5 cut(s) 789, 830, 1113, 1397, 1550
MspA1I CMGCKG 2 cut(s) 894, 1335
MspCI CTTAAG 1 cut(s) 829
MspR9I CCNGG 5 cut(s) 537, 930, 1025, 1203, 1472
MvaI CCWGG 2 cut(s) 537, 1472
MvnI CGCG 3 cut(s) 880, 1163, 1349
MwoI GCNNNNNNNGC 3 cut(s) 35, 597, 1532
NaeI GCCGGC 1 cut(s) 870
NarI GGCGCC 3 cut(s) 29, 866, 1074
NciI CCSGG 3 cut(s) 930, 1025, 1203
NcoI CCATGG 1 cut(s) 1507
NdeI CATATG 1 cut(s) 639
NdeII GATC 6 cut(s) 78, 111, 168, 180, 213, 1236
NgoMIV GCCGGC 1 cut(s) 868
NlaIII CATG 2 cut(s) 622, 1511
NlaIV GGNNCC 5 cut(s) 30, 783, 867, 1075, 1362
NmuCI GTSAC 4 cut(s) 94, 150, 463, 719
NspV TTCGAA 1 cut(s) 196
PagI TCATGA 1 cut(s) 618
PalAI GGCGCGCC 2 cut(s) 878, 1161
PauI GCGCGC 2 cut(s) 878, 1161
PcsI WCGNNNNNNNCGW 1 cut(s) 1361
PdiI GCCGGC 1 cut(s) 870
PfeI GAWTC 6 cut(s) 320, 383, 416, 440, 553, 1495
Pfl23II CGTACG 1 cut(s) 1365
PflMI CCANNNNNTGG 1 cut(s) 1145
PkrI GCNGC 6 cut(s) 460, 685, 906, 1179, 1324, 1542
PleI GAGTC 9 cut(s) 262, 406, 891, 943, 1012, 1064, 1216, 1285, 1337
PluTI GGCGCC 3 cut(s) 32, 869, 1077
PpsI GAGTC 9 cut(s) 262, 406, 891, 943, 1012, 1064, 1216, 1285, 1337
PpuMI RGGWCCY 1 cut(s) 781
Psp124BI GAGCTC 1 cut(s) 1434
Psp5II RGGWCCY 1 cut(s) 781
Psp6I CCWGG 2 cut(s) 535, 1470
PspFI CCCAGC 6 cut(s) 68, 890, 1062, 1173, 1296, 1335
PspGI CCWGG 2 cut(s) 535, 1470
PspLI CGTACG 1 cut(s) 1365
PspN4I GGNNCC 5 cut(s) 30, 783, 867, 1075, 1362
PspPI GGNCC 1 cut(s) 781
PspPPI RGGWCCY 1 cut(s) 781
PstNI CAGNNNCTG 1 cut(s) 1546
PteI GCGCGC 2 cut(s) 878, 1161
RsaI GTAC 3 cut(s) 748, 862, 1367
RsaNI GTAC 3 cut(s) 747, 861, 1366
SacI GAGCTC 1 cut(s) 1434
SalI GTCGAC 3 cut(s) 221, 242, 256
SaqAI TTAA 5 cut(s) 789, 830, 1113, 1397, 1550
SatI GCNGC 6 cut(s) 459, 684, 905, 1178, 1323, 1541
Sau3AI GATC 6 cut(s) 78, 111, 168, 180, 213, 1236
Sau96I GGNCC 1 cut(s) 781
SchI GAGTC 9 cut(s) 263, 407, 891, 944, 1012, 1065, 1217, 1285, 1338
ScrFI CCNGG 5 cut(s) 537, 930, 1025, 1203, 1472
SduI GDGCHC 1 cut(s) 1434
SfaNI GCATC 3 cut(s) 763, 1114, 1473
SfoI GGCGCC 3 cut(s) 30, 867, 1075
SfuI TTCGAA 1 cut(s) 196
SgrAI CRCCGGYG 1 cut(s) 1357
SgsI GGCGCGCC 2 cut(s) 878, 1161
SinI GGWCC 1 cut(s) 781
SmlI CTYRAG 3 cut(s) 251, 689, 829
SmoI CTYRAG 3 cut(s) 251, 689, 829
Sse9I AATT 9 cut(s) 236, 729, 944, 1008, 1217, 1281, 1453, 1554, 1578
SspDI GGCGCC 3 cut(s) 28, 865, 1073
SspMI CTAG 4 cut(s) 86, 164, 204, 744
SstI GAGCTC 1 cut(s) 1434
StyD4I CCNGG 5 cut(s) 535, 928, 1023, 1201, 1470
StyI CCWWGG 2 cut(s) 777, 1507
TaaI ACNGT 9 cut(s) 19, 262, 676, 798, 860, 1143, 1370, 1548, 1573
TaiI ACGT 9 cut(s) 48, 96, 222, 365, 819, 1102, 1127, 1389, 1415
TaqI TCGA 8 cut(s) 196, 216, 222, 243, 257, 660, 1314, 1460
TaqII GACCGA 1 cut(s) 28
TasI AATT 9 cut(s) 236, 729, 944, 1008, 1217, 1281, 1453, 1554, 1578
TauI GCSGC 2 cut(s) 461, 686
TfiI GAWTC 6 cut(s) 320, 383, 416, 440, 553, 1495
Tru1I TTAA 5 cut(s) 789, 830, 1113, 1397, 1550
Tru9I TTAA 5 cut(s) 789, 830, 1113, 1397, 1550
TscAI CASTG 3 cut(s) 24, 863, 1551
TseFI GTSAC 4 cut(s) 94, 150, 463, 719
TseI GCWGC 4 cut(s) 904, 1177, 1322, 1540
Tsp45I GTSAC 4 cut(s) 94, 150, 463, 719
TspDTI ATGAA 3 cut(s) 607, 635, 1446
TspGWI ACGGA 5 cut(s) 482, 827, 838, 1110, 1121
TspRI CASTG 3 cut(s) 24, 863, 1551
Van91I CCANNNNNTGG 1 cut(s) 1145
Vha464I CTTAAG 1 cut(s) 829
VpaK11BI GGWCC 1 cut(s) 781
XapI RAATTY 5 cut(s) 944, 1008, 1217, 1281, 1578
XbaI TCTAGA 1 cut(s) 85
XcmI CCANNNNNNNNNTGG 1 cut(s) 1478
XmiI GTMKAC 4 cut(s) 222, 243, 257, 359
XspI CTAG 4 cut(s) 86, 164, 204, 744
ZraI GACGTC 7 cut(s) 94, 220, 817, 1100, 1125, 1387, 1413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.