FvH4_6g19721
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000118
Physical Location & Seq
Forward (+)
13212056 .. 13213194
1139 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g19721.t1

Sequence Viewer

Length: 447 bp
ATGAGGCCCAGGATAGCAGAAGTCTGGGATGGACCTACCGGGCAAGACTTTGAGGAAGTTGGTAGAGATGCTCATACTTTTAAAGGTTTCATGGAGCGCCCAAAATCTCTGCCACGTGGCGACGCAGGTCTCGCCCATGACCCAGGCCTTCCCAACGAAGACCCAGAGGGTGGACTTGCTCTTACTGTACATGGCCGGATGTGGAGCGCACGTCCGCACTGGCTTAAAGTGTGCACGTCCCTCCGTTCGCCACAGTTCATCGCCGACGACGGCGCGCCTCCCCCCAAGAAGACTCAAGCAGCATCCCCGACCACTTTCCCTCCCCGACGAGTCCGTTCTTTTCCAGTTTTCTGGCGAGATCACCCAAAACTTCAAATAAAGTCTATCTCACCGAAAACTGGAATTCGGTGCCGGATGGTGGCGAACGGAGCTCCGTGCGCACTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0016020 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

149

Amino Acids

16.37

Weight (kDa)

9.84

Isoelectric Point (pI)

45.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000118)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01361 FvH4_1g07161 FvH4_1g07431 FvH4_1g07821 FvH4_1g08223 FvH4_1g10041 FvH4_1g12132 FvH4_1g15053 FvH4_1g18161 FvH4_1g18400 FvH4_1g18931 FvH4_1g19242 FvH4_1g19461 FvH4_1g20550 FvH4_1g21381 FvH4_1g21542 FvH4_1g22102 FvH4_1g23991 FvH4_1g24542 FvH4_1g24951 FvH4_1g24960 FvH4_1g25272 FvH4_1g25552 FvH4_1g25771 FvH4_1g28771 FvH4_1g29201 FvH4_1g29611 FvH4_2g01181 FvH4_2g02491 FvH4_2g04621 FvH4_2g04631 FvH4_2g07460 FvH4_2g08540 FvH4_2g08550 FvH4_2g09292 FvH4_2g10501 FvH4_2g12101 FvH4_2g12220 FvH4_2g12551 FvH4_2g14071 FvH4_2g14241 FvH4_2g15041 FvH4_2g15311 FvH4_2g18971 FvH4_2g19220 FvH4_2g19260 FvH4_2g19611 FvH4_2g19652 FvH4_2g20211 FvH4_2g20231 FvH4_2g21541 FvH4_2g22380 FvH4_2g27712 FvH4_2g28171 FvH4_2g29879 FvH4_2g32391 FvH4_3g02171 FvH4_3g05531 FvH4_3g09750 FvH4_3g10310 FvH4_3g10460 FvH4_3g13172 FvH4_3g15232 FvH4_3g18481 FvH4_3g18621 FvH4_3g20504 FvH4_3g20812 FvH4_3g22320 FvH4_3g22930 FvH4_3g22940 FvH4_3g23752 FvH4_3g24791 FvH4_3g26411 FvH4_3g26432 FvH4_3g27201 FvH4_3g27862 FvH4_3g28871 FvH4_3g28954 FvH4_3g29131 FvH4_3g29832 FvH4_3g29922 FvH4_3g30190 FvH4_3g32231 FvH4_3g32250 FvH4_3g33460 FvH4_3g34670 FvH4_3g36982 FvH4_3g37001 FvH4_3g38252 FvH4_3g38772 FvH4_3g40141 FvH4_3g40181 FvH4_3g42521 FvH4_4g00090 FvH4_4g00290 FvH4_4g00301 FvH4_4g00530 FvH4_4g00823 FvH4_4g02300 FvH4_4g02450 FvH4_4g03360 FvH4_4g04481 FvH4_4g04761 FvH4_4g06301 FvH4_4g06630 FvH4_4g08312 FvH4_4g08552 FvH4_4g10053 FvH4_4g11971 FvH4_4g13211 FvH4_4g13511 FvH4_4g15351 FvH4_4g16360 FvH4_4g16601 FvH4_4g18462 FvH4_4g22911 FvH4_4g23221 FvH4_4g24301 FvH4_4g24721 FvH4_4g27905 FvH4_4g28971 FvH4_4g29540 FvH4_4g30720 FvH4_4g31521 FvH4_4g33371 FvH4_4g34111 FvH4_4g35740 FvH4_5g00131 FvH4_5g02530 FvH4_5g02550 FvH4_5g02560 FvH4_5g02580 FvH4_5g03783 FvH4_5g05681 FvH4_5g05681 FvH4_5g09371 FvH4_5g09381 FvH4_5g14611 FvH4_5g15341 FvH4_5g19801 FvH4_5g20110 FvH4_5g20911 FvH4_5g22230 FvH4_5g25751 FvH4_5g26070 FvH4_5g26471 FvH4_5g27072 FvH4_5g27471 FvH4_5g27471 FvH4_5g27998 FvH4_5g28291 FvH4_5g30951 FvH4_5g31082 FvH4_5g31890 FvH4_5g32251 FvH4_5g34112 FvH4_5g37184 FvH4_5g37993 FvH4_5g38271 FvH4_6g00153 FvH4_6g00640 FvH4_6g05921 FvH4_6g08591 FvH4_6g09511 FvH4_6g10331 FvH4_6g10401 FvH4_6g14161 FvH4_6g14171 FvH4_6g18481 FvH4_6g19721 FvH4_6g19980 FvH4_6g20104 FvH4_6g20112 FvH4_6g21261 FvH4_6g21651 FvH4_6g22051 FvH4_6g23141 FvH4_6g24822 FvH4_6g25082 FvH4_6g25391 FvH4_6g25560 FvH4_6g26350 FvH4_6g27031 FvH4_6g27810 FvH4_6g27971 FvH4_6g28331 FvH4_6g29391 FvH4_6g30781 FvH4_6g32221 FvH4_6g34680 FvH4_6g36181 FvH4_6g36551 FvH4_6g37491 FvH4_6g37663 FvH4_6g39590 FvH4_6g40582 FvH4_6g43843 FvH4_6g50551 FvH4_7g00240 FvH4_7g00731 FvH4_7g01031 FvH4_7g03301 FvH4_7g08180 FvH4_7g08180 FvH4_7g10631 FvH4_7g19710 FvH4_7g23892 FvH4_7g25280 FvH4_7g25551 FvH4_7g30121 FvH4_7g31931 FvH4_7g32672 FvH4_c21g00040 FvH4_c2g00053
prunus_persica Prupe.1G448800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322451 RchiOBHm_Chr5g0015171
rosa_laevigata RLG00000003077 RLG00000018186 RLG00000030343
rosa_multiflora Rmu_co8096726.1_g000001
rosa_roxburghii Rroxscaffold_157G00438380 Rroxscaffold_1G00001730 Rroxscaffold_3G00236310
rosa_rugosa Rorug02G0236500
rosa_samantha Rh4BG247300 Rh6BG286200 Rh6CG287300 Rh7DG257500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 439
Acc36I ACCTGC 1 cut(s) 116
AccB1I GGYRCC 1 cut(s) 408
AccB7I CCANNNNNTGG 1 cut(s) 170
AccII CGCG 1 cut(s) 275
AciI CCGC 1 cut(s) 215
AcoI YGGCCR 1 cut(s) 193
AcsI RAATTY 1 cut(s) 402
AcvI CACGTG 1 cut(s) 116
AfaI GTAC 1 cut(s) 189
AfiI CCNNNNNNNGG 3 cut(s) 170, 398, 418
AgsI TTSAA 1 cut(s) 374
AjiI CACGTC 2 cut(s) 212, 237
AjnI CCWGG 2 cut(s) 8, 142
AluBI AGCT 1 cut(s) 431
AluI AGCT 1 cut(s) 431
Alw21I GWGCWC 2 cut(s) 236, 433
Alw26I GTCTC 1 cut(s) 134
Alw44I GTGCAC 1 cut(s) 232
AoxI GGCC 3 cut(s) 5, 145, 193
ApaLI GTGCAC 1 cut(s) 232
ApeKI GCWGC 1 cut(s) 299
ApoI RAATTY 1 cut(s) 402
AscI GGCGCGCC 1 cut(s) 273
AspLEI GCGC 5 cut(s) 99, 209, 275, 277, 440
AspS9I GGNCC 2 cut(s) 6, 32
AsuC2I CCSGG 1 cut(s) 40
AsuHPI GGTGA 2 cut(s) 353, 381
AvaII GGWCC 1 cut(s) 32
BaeGI GKGCMC 1 cut(s) 236
BanI GGYRCC 1 cut(s) 408
BanII GRGCYC 1 cut(s) 433
BbrPI CACGTG 1 cut(s) 116
BbsI GAAGAC 2 cut(s) 165, 296
Bbv12I GWGCWC 2 cut(s) 236, 433
BbvI GCAGC 1 cut(s) 311
BccI CCATC 2 cut(s) 23, 409
BceAI ACGGC 1 cut(s) 286
BciT130I CCWGG 2 cut(s) 10, 144
BcnI CCSGG 1 cut(s) 40
BcoDI GTCTC 1 cut(s) 134
BfoI RGCGCY 1 cut(s) 100
BfuAI ACCTGC 1 cut(s) 116
BisI GCNGC 1 cut(s) 300
BlsI GCNGC 1 cut(s) 301
Bme1390I CCNGG 3 cut(s) 10, 40, 144
Bme18I GGWCC 1 cut(s) 32
BmgBI CACGTC 2 cut(s) 212, 237
BmgT120I GGNCC 2 cut(s) 6, 32
BmiI GGNNCC 1 cut(s) 410
BmrFI CCNGG 3 cut(s) 10, 40, 144
BmsI GCATC 2 cut(s) 58, 311
BoxI GACNNNNGTC 1 cut(s) 126
BpiI GAAGAC 2 cut(s) 165, 296
BpuEI CTTGAG 1 cut(s) 279
BpuMI CCSGG 1 cut(s) 40
BsaAI YACGTR 1 cut(s) 116
BsaI GGTCTC 1 cut(s) 134
BsaJI CCNNGG 2 cut(s) 8, 142
BsaXI ACNNNNNCTCC 4 cut(s) 196, 226, 304, 334
Bsc4I CCNNNNNNNGG 3 cut(s) 170, 398, 418
Bse1I ACTGG 3 cut(s) 224, 344, 403
BseBI CCWGG 2 cut(s) 10, 144
BseDI CCNNGG 2 cut(s) 8, 142
BseGI GGATG 4 cut(s) 34, 204, 302, 420
BseLI CCNNNNNNNGG 3 cut(s) 170, 398, 418
BseNI ACTGG 3 cut(s) 224, 344, 403
BsePI GCGCGC 1 cut(s) 273
BseSI GKGCMC 1 cut(s) 236
BseXI GCAGC 1 cut(s) 311
Bsh1236I CGCG 1 cut(s) 275
BshFI GGCC 3 cut(s) 7, 147, 195
BshNI GGYRCC 1 cut(s) 408
BsiHKAI GWGCWC 2 cut(s) 236, 433
BsiSI CCGG 3 cut(s) 39, 196, 412
BslFI GGGAC 1 cut(s) 223
BslI CCNNNNNNNGG 3 cut(s) 170, 398, 418
BsmAI GTCTC 1 cut(s) 134
BsmFI GGGAC 1 cut(s) 223
BsnI GGCC 3 cut(s) 7, 147, 195
Bso31I GGTCTC 1 cut(s) 134
Bsp1286I GDGCHC 2 cut(s) 236, 433
Bsp1407I TGTACA 1 cut(s) 187
Bsp143I GATC 1 cut(s) 358
BspACI CCGC 1 cut(s) 215
BspANI GGCC 3 cut(s) 7, 147, 195
BspFNI CGCG 1 cut(s) 275
BspLI GGNNCC 1 cut(s) 410
BspMI ACCTGC 1 cut(s) 116
BspT107I GGYRCC 1 cut(s) 408
BspTNI GGTCTC 1 cut(s) 134
BsrGI TGTACA 1 cut(s) 187
BsrI ACTGG 3 cut(s) 224, 344, 403
BssECI CCNNGG 2 cut(s) 8, 142
BssHII GCGCGC 1 cut(s) 273
BssMI GATC 1 cut(s) 358
Bst2UI CCWGG 2 cut(s) 10, 144
Bst4CI ACNGT 2 cut(s) 187, 255
BstAUI TGTACA 1 cut(s) 187
BstBAI YACGTR 1 cut(s) 116
BstC8I GCNNGC 1 cut(s) 275
BstF5I GGATG 4 cut(s) 34, 204, 302, 420
BstFNI CGCG 1 cut(s) 275
BstH2I RGCGCY 1 cut(s) 100
BstHHI GCGC 5 cut(s) 99, 209, 275, 277, 440
BstKTI GATC 1 cut(s) 361
BstMAI GTCTC 1 cut(s) 134
BstMBI GATC 1 cut(s) 358
BstMWI GCNNNNNNNGC 3 cut(s) 131, 428, 437
BstNI CCWGG 2 cut(s) 10, 144
BstPAI GACNNNNGTC 1 cut(s) 126
BstSCI CCNGG 3 cut(s) 8, 38, 142
BstSLI GKGCMC 1 cut(s) 236
BstUI CGCG 1 cut(s) 275
BstV1I GCAGC 1 cut(s) 311
BstV2I GAAGAC 2 cut(s) 165, 296
BstXI CCANNNNNNTGG 1 cut(s) 351
BsuRI GGCC 3 cut(s) 7, 147, 195
BtgZI GCGATG 1 cut(s) 244
BtrI CACGTC 2 cut(s) 212, 237
BtsCI GGATG 4 cut(s) 34, 204, 302, 420
BtsIMutI CAGTG 1 cut(s) 217
BveI ACCTGC 1 cut(s) 116
Cac8I GCNNGC 1 cut(s) 275
CfoI GCGC 5 cut(s) 99, 209, 275, 277, 440
Cfr13I GGNCC 2 cut(s) 6, 32
CseI GACGC 1 cut(s) 131
Csp6I GTAC 1 cut(s) 188
CviAII CATG 3 cut(s) 91, 137, 191
CviJI RGCY 5 cut(s) 7, 147, 195, 223, 431
CviKI_1 RGCY 5 cut(s) 7, 147, 195, 223, 431
CviQI GTAC 1 cut(s) 188
DpnI GATC 1 cut(s) 360
DpnII GATC 1 cut(s) 358
DraI TTTAAA 1 cut(s) 82
EaeI YGGCCR 1 cut(s) 193
Ecl136II GAGCTC 1 cut(s) 431
Eco147I AGGCCT 1 cut(s) 147
Eco24I GRGCYC 1 cut(s) 433
Eco31I GGTCTC 1 cut(s) 134
Eco47I GGWCC 1 cut(s) 32
Eco53kI GAGCTC 1 cut(s) 431
Eco72I CACGTG 1 cut(s) 116
EcoICRI GAGCTC 1 cut(s) 431
EcoRI GAATTC 1 cut(s) 402
EcoRII CCWGG 2 cut(s) 8, 142
EcoT38I GRGCYC 1 cut(s) 433
FaeI CATG 3 cut(s) 94, 140, 194
FaiI YATR 4 cut(s) 75, 92, 138, 192
FaqI GGGAC 1 cut(s) 223
FatI CATG 3 cut(s) 90, 136, 190
Fnu4HI GCNGC 1 cut(s) 300
FokI GGATG 4 cut(s) 41, 211, 289, 427
FriOI GRGCYC 1 cut(s) 433
Fsp4HI GCNGC 1 cut(s) 300
FspAI RTGCGCAY 1 cut(s) 439
FspI TGCGCA 1 cut(s) 439
GlaI GCGC 5 cut(s) 98, 208, 274, 276, 439
GluI GCNGC 1 cut(s) 300
HaeII RGCGCY 1 cut(s) 100
HaeIII GGCC 3 cut(s) 7, 147, 195
HapII CCGG 3 cut(s) 39, 196, 412
HgaI GACGC 1 cut(s) 131
HhaI GCGC 5 cut(s) 99, 209, 275, 277, 440
Hin1II CATG 3 cut(s) 94, 140, 194
Hin6I GCGC 5 cut(s) 97, 207, 273, 275, 438
HinP1I GCGC 5 cut(s) 97, 207, 273, 275, 438
HinfI GANTC 2 cut(s) 292, 330
HpaII CCGG 3 cut(s) 39, 196, 412
HphI GGTGA 2 cut(s) 353, 381
Hpy166II GTNNAC 2 cut(s) 173, 234
Hpy8I GTNNAC 2 cut(s) 173, 234
Hpy99I CGWCG 4 cut(s) 125, 269, 272, 330
HpyAV CCTTC 1 cut(s) 158
HpyCH4III ACNGT 2 cut(s) 187, 255
HpyCH4IV ACGT 3 cut(s) 115, 211, 236
HpyCH4V TGCA 1 cut(s) 234
HpyF10VI GCNNNNNNNGC 3 cut(s) 131, 428, 437
HpySE526I ACGT 3 cut(s) 115, 211, 236
Hsp92II CATG 3 cut(s) 94, 140, 194
HspAI GCGC 5 cut(s) 97, 207, 273, 275, 438
Kzo9I GATC 1 cut(s) 358
LmnI GCTCC 4 cut(s) 94, 204, 428, 436
Lsp1109I GCAGC 1 cut(s) 311
LweI GCATC 2 cut(s) 58, 311
MaeII ACGT 3 cut(s) 115, 211, 236
MalI GATC 1 cut(s) 360
MboI GATC 1 cut(s) 358
MboII GAAGA 2 cut(s) 170, 301
MhlI GDGCHC 2 cut(s) 236, 433
MluCI AATT 1 cut(s) 402
MlyI GAGTC 2 cut(s) 286, 339
MnlI CCTC 5 cut(s) 46, 160, 251, 288, 330
MseI TTAA 3 cut(s) 81, 225, 445
MspI CCGG 3 cut(s) 39, 196, 412
MspR9I CCNGG 3 cut(s) 10, 40, 144
MvaI CCWGG 2 cut(s) 10, 144
MvnI CGCG 1 cut(s) 275
MwoI GCNNNNNNNGC 3 cut(s) 131, 428, 437
NciI CCSGG 1 cut(s) 40
NdeII GATC 1 cut(s) 358
NlaIII CATG 3 cut(s) 94, 140, 194
NlaIV GGNNCC 1 cut(s) 410
NsbI TGCGCA 1 cut(s) 439
PalAI GGCGCGCC 1 cut(s) 273
PauI GCGCGC 1 cut(s) 273
PceI AGGCCT 1 cut(s) 147
PflMI CCANNNNNTGG 1 cut(s) 170
PkrI GCNGC 1 cut(s) 301
PleI GAGTC 2 cut(s) 286, 338
PmaCI CACGTG 1 cut(s) 116
PmlI CACGTG 1 cut(s) 116
PpsI GAGTC 2 cut(s) 286, 338
Ppu21I YACGTR 1 cut(s) 116
PshAI GACNNNNGTC 1 cut(s) 126
Psp124BI GAGCTC 1 cut(s) 433
Psp6I CCWGG 2 cut(s) 8, 142
PspCI CACGTG 1 cut(s) 116
PspGI CCWGG 2 cut(s) 8, 142
PspN4I GGNNCC 1 cut(s) 410
PspPI GGNCC 2 cut(s) 6, 32
PteI GCGCGC 1 cut(s) 273
RsaI GTAC 1 cut(s) 189
RsaNI GTAC 1 cut(s) 188
SacI GAGCTC 1 cut(s) 433
SaqAI TTAA 3 cut(s) 81, 225, 445
SatI GCNGC 1 cut(s) 300
Sau3AI GATC 1 cut(s) 358
Sau96I GGNCC 2 cut(s) 6, 32
SchI GAGTC 2 cut(s) 286, 339
ScrFI CCNGG 3 cut(s) 10, 40, 144
SduI GDGCHC 2 cut(s) 236, 433
SetI ASST 7 cut(s) 37, 88, 118, 130, 214, 239, 433
SfaNI GCATC 2 cut(s) 58, 311
SgsI GGCGCGCC 1 cut(s) 273
SinI GGWCC 1 cut(s) 32
SmlI CTYRAG 1 cut(s) 294
SmoI CTYRAG 1 cut(s) 294
Sse9I AATT 1 cut(s) 402
SseBI AGGCCT 1 cut(s) 147
SsiI CCGC 1 cut(s) 215
SstI GAGCTC 1 cut(s) 433
StuI AGGCCT 1 cut(s) 147
StyD4I CCNGG 3 cut(s) 8, 38, 142
TaaI ACNGT 2 cut(s) 187, 255
TaiI ACGT 3 cut(s) 118, 214, 239
TasI AATT 1 cut(s) 402
TatI WGTACW 1 cut(s) 187
Tru1I TTAA 3 cut(s) 81, 225, 445
Tru9I TTAA 3 cut(s) 81, 225, 445
TscAI CASTG 1 cut(s) 224
TseI GCWGC 1 cut(s) 299
TspDTI ATGAA 2 cut(s) 79, 247
TspGWI ACGGA 4 cut(s) 233, 323, 423, 441
TspRI CASTG 1 cut(s) 224
Van91I CCANNNNNTGG 1 cut(s) 170
VneI GTGCAC 1 cut(s) 232
VpaK11BI GGWCC 1 cut(s) 32
XapI RAATTY 1 cut(s) 402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.