FvH4_5g22230

F-box domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000118
Physical Location & Seq
Forward (+)
13655389 .. 13668452
13064 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g22230.t1

Sequence Viewer

Length: 2457 bp
ATGTTCCCCGACGAGGAGGGCCAAAACGGTAAAATGGCCGAGTGTGGCGTCGACGAAAAGACAGGTGGTGGTGACCAGCTTTTCCGGTACGATATTTTCATGGTTTGGGACGAGGCAAACATTCCTATACACTTCAAAAGCCTAATCGGGAAAGGATTGAAGGTCCGTGCTGGACTAGAAAACCCTAACTGTGCTGATGACATGCTTAAGTTGAAGAATAAAAGATACGGACGTCGCACCGTCTTACGGTGCGGATTTCTCTCCGTTCGCCACCGTACGGCGCCAACAAGAGCACGCCTCCACCCCAGCAGCTTCCCCGACCTCTTTCCATCCCCGGCGAGTCAGCCGAATTCCAGTTTTCCGGCCAGATTGACTTTGTTTGAAGTTTTGGGTGATTTGGCCGGAAAACTGGAATTCGGCGGACTCGCCGGAGATGGAAAGAGGTCGGGGAAGCTGCTGGAGTCTGCGAGGGTGGAGGCGCGCCCTCGCCAGTGCTCGCCGATGCCGTACGGTTGCGAAAGGAGGAACATCCGCACGGGAATGATTTTGAAACAAGGGCACAGCAAGGCTAAAATTGTTAGAATAGACCACAACACATTTGATAGAATGTACGAAAACCAGGACACCTTCATGGCAGGAACAAATAGTCCCAGGAAACGCATAAAAATAGATGTCAGATATCCCACAAACTTTGATCCCAATGATCGGATATCGCATTTGCCAGATGACATTTTGCGTCACATTCTGTCCTTAATAACTCTCCATGAGGTAGGTCGAACTAGTATTTTGTCCAAAAGGTGGCAGAACGTGCGAAGCTCAAACCCCAATTTGGACTTTGATGAAAGGGTTTTCATTAAGAACCTGTCAGACAATCTTACTGATATTACAAGAAAGCAGAAACCTGATCTTATGGGCAAGAATGTAAGAATTTCAGAGCACATAATCCAAAATTTAATCCTAGGTTCCCCCTTGATTGAGAGCTTGACTCTTGTCTGCTGTTGGAATGTGAAAAATATTGAGCTTTCCAGTCTTGTTAATGACAAGAAGCTGGAGCTACAGGATTGCGGTGAAAATGGAGGCCGATTTGAGAGAATTGAGTTCGAAGAGTTGAAACTTCAAAGTTTAAGCTACTCCTCAGACAACATGGTATTTGACATAAATTCCAAATTTCTTAAGACCCTAAAAGTTTTAAGTATAAAAGGCAGATTCCTGACAGATCAATTATTGAGAAGAATCATCCGTATATGTGTACGCCTTAAAAGCTTGGTACTCAGCTGCTCTAAGCTGAAGAGATTTGAAATTTCAAGTCTTCGGCTCAAGAAGTTAAGTTTGTGTGATGTGTCTGAGAAATTAGATAATGGTGTACTCAATACTCCAAAGTTACGCTCATTCGGATATGATGGCAACAACTTGGTGCCCCTTCTATTTTCACTTGATATGTCAAGTGTGGAGGATGCTGCTGTCAAAATGTCAACTGAGCTCAATGCTTCTCAGTTCTTTAAATTGAGATCATATCATGGAAAGTTACGTACGTTCCTCCCGGAAGAACTGGGTGATAATAGTTCTATCCCTTCAATTTCGAATATCAAGCATTTAAAAATTGAATTGTATTATCCTCTTAATGAAAAAGATAACTATGGAGCTCTTTTGGATGGCTTACTGTGGAGTTGTCATCCTGAAACCCTTTCTATGGAATTGGGTTGGGGTTACAACGATGAGGTTGCAAAGGTTTTGTGCGAAAGGCTTGGCAAGATAGATCCAAGAGATGAATGCTGTAGTACTGCATGCACAAGTAGCATGCTGGTCCTTTTGGTAGCCATAGCTCTGTGTGGTACTTGCTTCGGTGCCGCTGCCGGTGCTGCTTATAAAAAAAAAGAAAGGCACAAGTACTCTAAGAAGACGGCGAGGCTAGGCGACACCAAGTCAGCTTGCTGGAAAACTCAGAGAACCAATAGAGTAGAGAAATCACTGCGGAGGGCAGGGCAGACCGTCGCGAGACAAGACGTGAACCAAGCTGATCCAGAGATTAAAAGACCATCATTGTCTCTTGCAACCACGCCGACACCTGCAAGAGGTGAGTCTTTCTTCCATGATCCATCAAGGTTGATCTTTATAGTACCCACAGGGTTGGCTTTCCAGGTAGAGGACTGGTTATTTCCTGAGGTTATTGAAGGTGAGGGTGGGATGGTGGCTGAGGGACGGGAGCATGGGGTGGATAGAATGAGTTACTATGGAAGGGTGATGGTGGGTGGGGGTGATAGCTACAGAGTGATGGTCTATGGAGTGATGATTGTTCAAGAAAAGATTTTGAAGTGGGAATTTGGATTAAGAGAATTCGGCACTAGCTGTGAAAGCTTTGGAGGCTGTTGCCACAGGGTCAACTCTCACACGCTAGTAAATGAAGCAACAACGGCTCTTCCAGATTTCCCAATAGAGGAAAGAGATCTGAGTAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box LRR_2

Protein Analysis

819

Amino Acids

92.24

Weight (kDa)

8.97

Isoelectric Point (pI)

47.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 237 - 274 1.5e-06 F-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000118)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01361 FvH4_1g07161 FvH4_1g07431 FvH4_1g07821 FvH4_1g08223 FvH4_1g10041 FvH4_1g12132 FvH4_1g15053 FvH4_1g18161 FvH4_1g18400 FvH4_1g18931 FvH4_1g19242 FvH4_1g19461 FvH4_1g20550 FvH4_1g21381 FvH4_1g21542 FvH4_1g22102 FvH4_1g23991 FvH4_1g24542 FvH4_1g24951 FvH4_1g24960 FvH4_1g25272 FvH4_1g25552 FvH4_1g25771 FvH4_1g28771 FvH4_1g29201 FvH4_1g29611 FvH4_2g01181 FvH4_2g02491 FvH4_2g04621 FvH4_2g04631 FvH4_2g07460 FvH4_2g08540 FvH4_2g08550 FvH4_2g09292 FvH4_2g10501 FvH4_2g12101 FvH4_2g12220 FvH4_2g12551 FvH4_2g14071 FvH4_2g14241 FvH4_2g15041 FvH4_2g15311 FvH4_2g18971 FvH4_2g19220 FvH4_2g19260 FvH4_2g19611 FvH4_2g19652 FvH4_2g20211 FvH4_2g20231 FvH4_2g21541 FvH4_2g22380 FvH4_2g27712 FvH4_2g28171 FvH4_2g29879 FvH4_2g32391 FvH4_3g02171 FvH4_3g05531 FvH4_3g09750 FvH4_3g10310 FvH4_3g10460 FvH4_3g13172 FvH4_3g15232 FvH4_3g18481 FvH4_3g18621 FvH4_3g20504 FvH4_3g20812 FvH4_3g22320 FvH4_3g22930 FvH4_3g22940 FvH4_3g23752 FvH4_3g24791 FvH4_3g26411 FvH4_3g26432 FvH4_3g27201 FvH4_3g27862 FvH4_3g28871 FvH4_3g28954 FvH4_3g29131 FvH4_3g29832 FvH4_3g29922 FvH4_3g30190 FvH4_3g32231 FvH4_3g32250 FvH4_3g33460 FvH4_3g34670 FvH4_3g36982 FvH4_3g37001 FvH4_3g38252 FvH4_3g38772 FvH4_3g40141 FvH4_3g40181 FvH4_3g42521 FvH4_4g00090 FvH4_4g00290 FvH4_4g00301 FvH4_4g00530 FvH4_4g00823 FvH4_4g02300 FvH4_4g02450 FvH4_4g03360 FvH4_4g04481 FvH4_4g04761 FvH4_4g06301 FvH4_4g06630 FvH4_4g08312 FvH4_4g08552 FvH4_4g10053 FvH4_4g11971 FvH4_4g13211 FvH4_4g13511 FvH4_4g15351 FvH4_4g16360 FvH4_4g16601 FvH4_4g18462 FvH4_4g22911 FvH4_4g23221 FvH4_4g24301 FvH4_4g24721 FvH4_4g27905 FvH4_4g28971 FvH4_4g29540 FvH4_4g30720 FvH4_4g31521 FvH4_4g33371 FvH4_4g34111 FvH4_4g35740 FvH4_5g00131 FvH4_5g02530 FvH4_5g02550 FvH4_5g02560 FvH4_5g02580 FvH4_5g03783 FvH4_5g05681 FvH4_5g05681 FvH4_5g09371 FvH4_5g09381 FvH4_5g14611 FvH4_5g15341 FvH4_5g19801 FvH4_5g20110 FvH4_5g20911 FvH4_5g22230 FvH4_5g25751 FvH4_5g26070 FvH4_5g26471 FvH4_5g27072 FvH4_5g27471 FvH4_5g27471 FvH4_5g27998 FvH4_5g28291 FvH4_5g30951 FvH4_5g31082 FvH4_5g31890 FvH4_5g32251 FvH4_5g34112 FvH4_5g37184 FvH4_5g37993 FvH4_5g38271 FvH4_6g00153 FvH4_6g00640 FvH4_6g05921 FvH4_6g08591 FvH4_6g09511 FvH4_6g10331 FvH4_6g10401 FvH4_6g14161 FvH4_6g14171 FvH4_6g18481 FvH4_6g19721 FvH4_6g19980 FvH4_6g20104 FvH4_6g20112 FvH4_6g21261 FvH4_6g21651 FvH4_6g22051 FvH4_6g23141 FvH4_6g24822 FvH4_6g25082 FvH4_6g25391 FvH4_6g25560 FvH4_6g26350 FvH4_6g27031 FvH4_6g27810 FvH4_6g27971 FvH4_6g28331 FvH4_6g29391 FvH4_6g30781 FvH4_6g32221 FvH4_6g34680 FvH4_6g36181 FvH4_6g36551 FvH4_6g37491 FvH4_6g37663 FvH4_6g39590 FvH4_6g40582 FvH4_6g43843 FvH4_6g50551 FvH4_7g00240 FvH4_7g00731 FvH4_7g01031 FvH4_7g03301 FvH4_7g08180 FvH4_7g08180 FvH4_7g10631 FvH4_7g19710 FvH4_7g23892 FvH4_7g25280 FvH4_7g25551 FvH4_7g30121 FvH4_7g31931 FvH4_7g32672 FvH4_c21g00040 FvH4_c2g00053
prunus_persica Prupe.1G448800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322451 RchiOBHm_Chr5g0015171
rosa_laevigata RLG00000003077 RLG00000018186 RLG00000030343
rosa_multiflora Rmu_co8096726.1_g000001
rosa_roxburghii Rroxscaffold_157G00438380 Rroxscaffold_1G00001730 Rroxscaffold_3G00236310
rosa_rugosa Rorug02G0236500
rosa_samantha Rh4BG247300 Rh6BG286200 Rh6CG287300 Rh7DG257500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1866
AarI CACCTGC 1 cut(s) 2074
AatII GACGTC 1 cut(s) 235
Acc36I ACCTGC 1 cut(s) 2074
AccB1I GGYRCC 3 cut(s) 280, 1414, 1844
AccB7I CCANNNNNTGG 1 cut(s) 798
AccI GTMKAC 1 cut(s) 51
AccII CGCG 2 cut(s) 481, 1994
AciI CCGC 6 cut(s) 252, 420, 532, 1065, 1848, 1972
AclWI GGATC 4 cut(s) 689, 1751, 2012, 2087
AcoI YGGCCR 3 cut(s) 36, 363, 399
AcsI RAATTY 9 cut(s) 349, 413, 927, 949, 1159, 1166, 1299, 2318, 2333
AcuI CTGAAG 1 cut(s) 1307
AcyI GRCGYC 3 cut(s) 48, 232, 281
AflII CTTAAG 2 cut(s) 206, 1172
AhdI GACNNNNNGTC 1 cut(s) 1921
AhlI ACTAGT 1 cut(s) 779
AjiI CACGTC 1 cut(s) 2005
AjnI CCWGG 3 cut(s) 618, 650, 2136
AloI GAACNNNNNNTCC 2 cut(s) 631, 663
Alw21I GWGCWC 5 cut(s) 295, 497, 939, 1482, 1645
Alw26I GTCTC 2 cut(s) 1990, 2049
AlwI GGATC 4 cut(s) 689, 1751, 2012, 2087
AoxI GGCC 5 cut(s) 19, 36, 363, 399, 1078
ApeKI GCWGC 6 cut(s) 309, 454, 1275, 1457, 1850, 1859
ApoI RAATTY 9 cut(s) 349, 413, 927, 949, 1159, 1166, 1299, 2318, 2333
AscI GGCGCGCC 1 cut(s) 479
AspA2I CCTAGG 1 cut(s) 958
AspLEI GCGC 3 cut(s) 283, 481, 483
AspS9I GGNCC 3 cut(s) 19, 163, 1804
AsuC2I CCSGG 2 cut(s) 335, 1541
AsuHPI GGTGA 8 cut(s) 83, 404, 1079, 1565, 2087, 2186, 2251, 2267
AsuII TTCGAA 2 cut(s) 1101, 1580
AvaII GGWCC 2 cut(s) 163, 1804
AvrII CCTAGG 1 cut(s) 958
AxyI CCTNAGG 1 cut(s) 2160
BaeGI GKGCMC 2 cut(s) 561, 1419
BaeI ACNNNNGTAYC 2 cut(s) 217, 250
BanI GGYRCC 3 cut(s) 280, 1414, 1844
BanII GRGCYC 2 cut(s) 1482, 1645
BbsI GAAGAC 2 cut(s) 1301, 1904
Bbv12I GWGCWC 5 cut(s) 295, 497, 939, 1482, 1645
BbvCI CCTCAGC 1 cut(s) 2193
BbvI GCAGC 6 cut(s) 321, 441, 1262, 1444, 1837, 1846
BccI CCATC 9 cut(s) 337, 428, 1394, 1646, 2044, 2104, 2179, 2236, 2266
BceAI ACGGC 4 cut(s) 294, 490, 1917, 2427
BcgI CGANNNNNNTGC 2 cut(s) 1703, 1737
BciT130I CCWGG 3 cut(s) 620, 652, 2138
BcnI CCSGG 2 cut(s) 335, 1541
BcoDI GTCTC 2 cut(s) 1990, 2049
BcuI ACTAGT 1 cut(s) 779
BfaI CTAG 6 cut(s) 176, 780, 959, 1910, 2343, 2393
BfmI CTRYAG 3 cut(s) 1055, 1774, 2263
BfoI RGCGCY 1 cut(s) 284
BfrI CTTAAG 2 cut(s) 206, 1172
BfuAI ACCTGC 1 cut(s) 2074
BglII AGATCT 1 cut(s) 2443
BisI GCNGC 7 cut(s) 310, 455, 1276, 1458, 1848, 1851, 1860
BlnI CCTAGG 1 cut(s) 958
BlsI GCNGC 7 cut(s) 311, 456, 1277, 1459, 1849, 1852, 1861
BmcAI AGTACT 2 cut(s) 1780, 1889
Bme1390I CCNGG 5 cut(s) 335, 620, 652, 1541, 2138
Bme18I GGWCC 2 cut(s) 163, 1804
BmeRI GACNNNNNGTC 1 cut(s) 1921
BmgBI CACGTC 1 cut(s) 2005
BmgT120I GGNCC 3 cut(s) 19, 163, 1804
BmiI GGNNCC 4 cut(s) 282, 964, 1416, 1846
BmrFI CCNGG 5 cut(s) 335, 620, 652, 1541, 2138
BmrI ACTGGG 1 cut(s) 1559
BmsI GCATC 2 cut(s) 492, 1444
BmuI ACTGGG 1 cut(s) 1559
BoxI GACNNNNGTC 1 cut(s) 989
BpiI GAAGAC 2 cut(s) 1301, 1904
BplI GAGNNNNNCTC 4 cut(s) 282, 314, 970, 1002
BpmI CTGGAG 2 cut(s) 479, 1070
Bpu10I CCTNAGC 1 cut(s) 2193
Bpu14I TTCGAA 2 cut(s) 1101, 1580
BpuEI CTTGAG 1 cut(s) 1301
BpuMI CCSGG 2 cut(s) 335, 1541
BsaAI YACGTR 1 cut(s) 1529
BsaHI GRCGYC 3 cut(s) 48, 232, 281
BsaJI CCNNGG 3 cut(s) 333, 650, 958
BsaWI WCCGGW 1 cut(s) 84
Bse118I RCCGGY 1 cut(s) 1853
Bse1I ACTGG 6 cut(s) 354, 414, 490, 1026, 1554, 2153
Bse21I CCTNAGG 1 cut(s) 2160
BseBI CCWGG 3 cut(s) 620, 652, 2138
BseDI CCNNGG 3 cut(s) 333, 650, 958
BseGI GGATG 7 cut(s) 329, 528, 1236, 1459, 1657, 1672, 2190
BseMII CTCAG 9 cut(s) 1149, 1285, 1335, 1467, 1505, 1955, 2151, 2184, 2438
BseNI ACTGG 6 cut(s) 354, 414, 490, 1026, 1554, 2153
BsePI GCGCGC 1 cut(s) 479
BseRI GAGGAG 2 cut(s) 29, 1123
BseSI GKGCMC 2 cut(s) 561, 1419
BseXI GCAGC 6 cut(s) 321, 441, 1262, 1444, 1837, 1846
BseYI CCCAGC 1 cut(s) 305
Bsh1236I CGCG 2 cut(s) 481, 1994
BshFI GGCC 5 cut(s) 21, 38, 365, 401, 1080
BshNI GGYRCC 3 cut(s) 280, 1414, 1844
BsiHKAI GWGCWC 5 cut(s) 295, 497, 939, 1482, 1645
BsiSI CCGG 7 cut(s) 85, 335, 362, 402, 429, 1541, 1854
BsiWI CGTACG 3 cut(s) 275, 507, 1529
BslFI GGGAC 3 cut(s) 122, 633, 2211
BsmAI GTCTC 2 cut(s) 1990, 2049
BsmFI GGGAC 3 cut(s) 122, 633, 2211
BsmI GAATGC 1 cut(s) 1775
BsnI GGCC 5 cut(s) 21, 38, 365, 401, 1080
Bsp119I TTCGAA 2 cut(s) 1101, 1580
Bsp1286I GDGCHC 7 cut(s) 295, 497, 561, 939, 1419, 1482, 1645
Bsp68I TCGCGA 1 cut(s) 1994
BspACI CCGC 6 cut(s) 252, 420, 532, 1065, 1848, 1972
BspANI GGCC 5 cut(s) 21, 38, 365, 401, 1080
BspCNI CTCAG 9 cut(s) 1148, 1284, 1336, 1468, 1504, 1954, 2152, 2185, 2439
BspFNI CGCG 2 cut(s) 481, 1994
BspLI GGNNCC 4 cut(s) 282, 964, 1416, 1846
BspMI ACCTGC 1 cut(s) 2074
BspPI GGATC 4 cut(s) 689, 1751, 2012, 2087
BspQI GCTCTTC 1 cut(s) 2421
BspT104I TTCGAA 2 cut(s) 1101, 1580
BspT107I GGYRCC 3 cut(s) 280, 1414, 1844
BspTI CTTAAG 2 cut(s) 206, 1172
BsrFI RCCGGY 1 cut(s) 1853
BsrI ACTGG 6 cut(s) 354, 414, 490, 1026, 1554, 2153
BssAI RCCGGY 1 cut(s) 1853
BssECI CCNNGG 3 cut(s) 333, 650, 958
BssHII GCGCGC 1 cut(s) 479
BssNI GRCGYC 3 cut(s) 48, 232, 281
BssT1I CCWWGG 1 cut(s) 958
Bst2UI CCWGG 3 cut(s) 620, 652, 2138
Bst4CI ACNGT 8 cut(s) 29, 191, 241, 249, 275, 512, 1662, 1990
Bst6I CTCTTC 3 cut(s) 1098, 1283, 2421
BstACI GRCGYC 3 cut(s) 48, 232, 281
BstAFI CTTAAG 2 cut(s) 206, 1172
BstAPI GCANNNNNTGC 1 cut(s) 808
BstBAI YACGTR 1 cut(s) 1529
BstBI TTCGAA 2 cut(s) 1101, 1580
BstC8I GCNNGC 6 cut(s) 295, 481, 497, 1786, 1799, 1930
BstEII GGTNACC 1 cut(s) 71
BstENI CCTNNNNNAGG 1 cut(s) 2070
BstF5I GGATG 7 cut(s) 329, 528, 1236, 1459, 1657, 1672, 2190
BstFNI CGCG 2 cut(s) 481, 1994
BstH2I RGCGCY 1 cut(s) 284
BstHHI GCGC 3 cut(s) 283, 481, 483
BstMAI GTCTC 2 cut(s) 1990, 2049
BstMWI GCNNNNNNNGC 8 cut(s) 808, 1260, 1794, 1856, 1859, 2352, 2361, 2411
BstNI CCWGG 3 cut(s) 620, 652, 2138
BstNSI RCATGY 3 cut(s) 205, 1788, 1801
BstPAI GACNNNNGTC 1 cut(s) 989
BstPI GGTNACC 1 cut(s) 71
BstSCI CCNGG 5 cut(s) 333, 618, 650, 1539, 2136
BstSFI CTRYAG 3 cut(s) 1055, 1774, 2263
BstSLI GKGCMC 2 cut(s) 561, 1419
BstSNI TACGTA 1 cut(s) 1529
BstUI CGCG 2 cut(s) 481, 1994
BstV1I GCAGC 6 cut(s) 321, 441, 1262, 1444, 1837, 1846
BstV2I GAAGAC 2 cut(s) 1301, 1904
BstX2I RGATCY 2 cut(s) 1756, 2443
BstXI CCANNNNNNTGG 1 cut(s) 2128
BstYI RGATCY 2 cut(s) 1756, 2443
Bsu36I CCTNAGG 1 cut(s) 2160
BsuRI GGCC 5 cut(s) 21, 38, 365, 401, 1080
BtrI CACGTC 1 cut(s) 2005
BtsCI GGATG 7 cut(s) 329, 528, 1236, 1459, 1657, 1672, 2190
BtsI GCAGTG 1 cut(s) 1967
BtsIMutI CAGTG 2 cut(s) 497, 1967
BtuMI TCGCGA 1 cut(s) 1994
BveI ACCTGC 1 cut(s) 2074
Cac8I GCNNGC 6 cut(s) 295, 481, 497, 1786, 1799, 1930
CfoI GCGC 3 cut(s) 283, 481, 483
Cfr10I RCCGGY 1 cut(s) 1853
Cfr13I GGNCC 3 cut(s) 19, 163, 1804
CseI GACGC 2 cut(s) 37, 725
CspCI CAANNNNNGTGG 2 cut(s) 673, 708
DinI GGCGCC 1 cut(s) 282
DraI TTTAAA 2 cut(s) 1501, 1596
DriI GACNNNNNGTC 1 cut(s) 1921
EaeI YGGCCR 3 cut(s) 36, 363, 399
Eam1104I CTCTTC 3 cut(s) 1098, 1283, 2421
Eam1105I GACNNNNNGTC 1 cut(s) 1921
EarI CTCTTC 3 cut(s) 1098, 1283, 2421
EciI GGCGGA 1 cut(s) 435
Ecl136II GAGCTC 2 cut(s) 1480, 1643
Eco105I TACGTA 1 cut(s) 1529
Eco130I CCWWGG 1 cut(s) 958
Eco24I GRGCYC 2 cut(s) 1482, 1645
Eco32I GATATC 2 cut(s) 680, 711
Eco47I GGWCC 2 cut(s) 163, 1804
Eco53kI GAGCTC 2 cut(s) 1480, 1643
Eco57I CTGAAG 1 cut(s) 1307
Eco81I CCTNAGG 1 cut(s) 2160
Eco91I GGTNACC 1 cut(s) 71
EcoICRI GAGCTC 2 cut(s) 1480, 1643
EcoNI CCTNNNNNAGG 1 cut(s) 2070
EcoO65I GGTNACC 1 cut(s) 71
EcoRI GAATTC 3 cut(s) 349, 413, 2333
EcoRII CCWGG 3 cut(s) 618, 650, 2136
EcoRV GATATC 2 cut(s) 680, 711
EcoT14I CCWWGG 1 cut(s) 958
EcoT38I GRGCYC 2 cut(s) 1482, 1645
EgeI GGCGCC 1 cut(s) 282
EheI GGCGCC 1 cut(s) 282
ErhI CCWWGG 1 cut(s) 958
FaqI GGGAC 3 cut(s) 122, 633, 2211
FblI GTMKAC 1 cut(s) 51
Fnu4HI GCNGC 7 cut(s) 310, 455, 1276, 1458, 1848, 1851, 1860
FokI GGATG 7 cut(s) 316, 515, 1223, 1466, 1659, 1664, 2197
FriOI GRGCYC 2 cut(s) 1482, 1645
Fsp4HI GCNGC 7 cut(s) 310, 455, 1276, 1458, 1848, 1851, 1860
FspBI CTAG 6 cut(s) 176, 780, 959, 1910, 2343, 2393
GlaI GCGC 3 cut(s) 282, 480, 482
GluI GCNGC 7 cut(s) 310, 455, 1276, 1458, 1848, 1851, 1860
GsaI CCCAGC 1 cut(s) 309
GsuI CTGGAG 2 cut(s) 479, 1070
HaeII RGCGCY 1 cut(s) 284
HaeIII GGCC 5 cut(s) 21, 38, 365, 401, 1080
HapII CCGG 7 cut(s) 85, 335, 362, 402, 429, 1541, 1854
HgaI GACGC 2 cut(s) 37, 725
HhaI GCGC 3 cut(s) 283, 481, 483
Hin1I GRCGYC 3 cut(s) 48, 232, 281
Hin6I GCGC 3 cut(s) 281, 479, 481
HinP1I GCGC 3 cut(s) 281, 479, 481
HincII GTYRAC 3 cut(s) 52, 1473, 2380
HindII GTYRAC 3 cut(s) 52, 1473, 2380
HindIII AAGCTT 2 cut(s) 1261, 2353
HinfI GANTC 7 cut(s) 340, 423, 461, 985, 1206, 1233, 2078
HpaII CCGG 7 cut(s) 85, 335, 362, 402, 429, 1541, 1854
HphI GGTGA 8 cut(s) 83, 404, 1079, 1565, 2087, 2186, 2251, 2267
Hpy166II GTNNAC 6 cut(s) 52, 1250, 1364, 1473, 2008, 2380
Hpy188I TCNGA 9 cut(s) 677, 708, 868, 934, 1138, 1345, 1394, 1944, 2448
Hpy188III TCNNGA 9 cut(s) 148, 1210, 1318, 1676, 1993, 2021, 2159, 2297, 2420
Hpy8I GTNNAC 6 cut(s) 52, 1250, 1364, 1473, 2008, 2380
Hpy99I CGWCG 5 cut(s) 14, 53, 56, 237, 1994
HpyAV CCTTC 6 cut(s) 154, 637, 1430, 1581, 2165, 2229
HpyCH4III ACNGT 8 cut(s) 29, 191, 241, 249, 275, 512, 1662, 1990
HpyCH4IV ACGT 5 cut(s) 232, 807, 1528, 1532, 2004
HpyCH4V TGCA 5 cut(s) 1724, 1784, 1788, 2051, 2069
HpyF10VI GCNNNNNNNGC 8 cut(s) 808, 1260, 1794, 1856, 1859, 2352, 2361, 2411
HpySE526I ACGT 5 cut(s) 232, 807, 1528, 1532, 2004
Hsp92I GRCGYC 3 cut(s) 48, 232, 281
HspAI GCGC 3 cut(s) 281, 479, 481
KasI GGCGCC 1 cut(s) 280
LguI GCTCTTC 1 cut(s) 2421
LmnI GCTCC 3 cut(s) 1051, 1640, 2203
Lsp1109I GCAGC 6 cut(s) 321, 441, 1262, 1444, 1837, 1846
LweI GCATC 2 cut(s) 492, 1444
MaeI CTAG 6 cut(s) 176, 780, 959, 1910, 2343, 2393
MaeII ACGT 5 cut(s) 232, 807, 1528, 1532, 2004
MaeIII GTNAC 6 cut(s) 71, 737, 1380, 1524, 1706, 2225
MboII GAAGA 9 cut(s) 226, 1115, 1242, 1300, 1301, 1556, 1909, 2077, 2408
MflI RGATCY 2 cut(s) 1756, 2443
MhlI GDGCHC 7 cut(s) 295, 497, 561, 939, 1419, 1482, 1645
Mly113I GGCGCC 1 cut(s) 281
MlyI GAGTC 5 cut(s) 349, 417, 470, 979, 2087
MmeI TCCRAC 1 cut(s) 980
MslI CAYNNNNRTG 2 cut(s) 539, 629
MspA1I CMGCKG 2 cut(s) 1275, 1850
MspCI CTTAAG 2 cut(s) 206, 1172
MspI CCGG 7 cut(s) 85, 335, 362, 402, 429, 1541, 1854
MspR9I CCNGG 5 cut(s) 335, 620, 652, 1541, 2138
Mva1269I GAATGC 1 cut(s) 1775
MvaI CCWGG 3 cut(s) 620, 652, 2138
MvnI CGCG 2 cut(s) 481, 1994
MwoI GCNNNNNNNGC 8 cut(s) 808, 1260, 1794, 1856, 1859, 2352, 2361, 2411
NarI GGCGCC 1 cut(s) 281
NciI CCSGG 2 cut(s) 335, 1541
NlaIV GGNNCC 4 cut(s) 282, 964, 1416, 1846
NmeAIII GCCGAG 1 cut(s) 64
NmuCI GTSAC 2 cut(s) 71, 737
NruI TCGCGA 1 cut(s) 1994
NspI RCATGY 3 cut(s) 205, 1788, 1801
NspV TTCGAA 2 cut(s) 1101, 1580
PaeI GCATGC 2 cut(s) 1788, 1801
PalAI GGCGCGCC 1 cut(s) 479
PaqCI CACCTGC 1 cut(s) 2074
PauI GCGCGC 1 cut(s) 479
PciSI GCTCTTC 1 cut(s) 2421
PcsI WCGNNNNNNNCGW 1 cut(s) 503
PctI GAATGC 1 cut(s) 1775
PfeI GAWTC 2 cut(s) 1206, 1233
Pfl23II CGTACG 3 cut(s) 275, 507, 1529
PflMI CCANNNNNTGG 1 cut(s) 798
PfoI TCCNGGA 1 cut(s) 1539
PkrI GCNGC 7 cut(s) 311, 456, 1277, 1459, 1849, 1852, 1861
PleI GAGTC 5 cut(s) 348, 417, 469, 979, 2086
PluTI GGCGCC 1 cut(s) 284
PpsI GAGTC 5 cut(s) 348, 417, 469, 979, 2086
Ppu21I YACGTR 1 cut(s) 1529
PshAI GACNNNNGTC 1 cut(s) 989
PsiI TTATAA 1 cut(s) 1866
Psp124BI GAGCTC 2 cut(s) 1482, 1645
Psp6I CCWGG 3 cut(s) 618, 650, 2136
PspEI GGTNACC 1 cut(s) 71
PspFI CCCAGC 1 cut(s) 305
PspGI CCWGG 3 cut(s) 618, 650, 2136
PspLI CGTACG 3 cut(s) 275, 507, 1529
PspN4I GGNNCC 4 cut(s) 282, 964, 1416, 1846
PspPI GGNCC 3 cut(s) 19, 163, 1804
PsuI RGATCY 2 cut(s) 1756, 2443
PteI GCGCGC 1 cut(s) 479
PvuII CAGCTG 1 cut(s) 1275
RruI TCGCGA 1 cut(s) 1994
RseI CAYNNNNRTG 2 cut(s) 539, 629
SacI GAGCTC 2 cut(s) 1482, 1645
SalI GTCGAC 1 cut(s) 50
SapI GCTCTTC 1 cut(s) 2421
SatI GCNGC 7 cut(s) 310, 455, 1276, 1458, 1848, 1851, 1860
Sau96I GGNCC 3 cut(s) 19, 163, 1804
ScaI AGTACT 2 cut(s) 1780, 1889
SchI GAGTC 5 cut(s) 349, 417, 470, 979, 2087
ScrFI CCNGG 5 cut(s) 335, 620, 652, 1541, 2138
SduI GDGCHC 7 cut(s) 295, 497, 561, 939, 1419, 1482, 1645
SfaNI GCATC 2 cut(s) 492, 1444
SfcI CTRYAG 3 cut(s) 1055, 1774, 2263
SfoI GGCGCC 1 cut(s) 282
SfuI TTCGAA 2 cut(s) 1101, 1580
SgrDI CGTCGACG 1 cut(s) 50
SgsI GGCGCGCC 1 cut(s) 479
SinI GGWCC 2 cut(s) 163, 1804
SmiMI CAYNNNNRTG 2 cut(s) 539, 629
SmlI CTYRAG 3 cut(s) 206, 1172, 1316
SmoI CTYRAG 3 cut(s) 206, 1172, 1316
SnaBI TACGTA 1 cut(s) 1529
SpeI ACTAGT 1 cut(s) 779
SphI GCATGC 2 cut(s) 1788, 1801
SsiI CCGC 6 cut(s) 252, 420, 532, 1065, 1848, 1972
SspDI GGCGCC 1 cut(s) 280
SspI AATATT 1 cut(s) 1015
SspMI CTAG 6 cut(s) 176, 780, 959, 1910, 2343, 2393
SstI GAGCTC 2 cut(s) 1482, 1645
StyD4I CCNGG 5 cut(s) 333, 618, 650, 1539, 2136
StyI CCWWGG 1 cut(s) 958
TaaI ACNGT 8 cut(s) 29, 191, 241, 249, 275, 512, 1662, 1990
TaiI ACGT 5 cut(s) 235, 810, 1531, 1535, 2007
TaqI TCGA 4 cut(s) 51, 775, 1101, 1580
TatI WGTACW 3 cut(s) 1363, 1778, 1887
TauI GCSGC 1 cut(s) 1850
TfiI GAWTC 2 cut(s) 1206, 1233
TscAI CASTG 2 cut(s) 497, 1974
TseFI GTSAC 2 cut(s) 71, 737
TseI GCWGC 6 cut(s) 309, 454, 1275, 1457, 1850, 1859
Tsp45I GTSAC 2 cut(s) 71, 737
TspDTI ATGAA 7 cut(s) 88, 619, 841, 855, 1638, 1782, 2415
TspGWI ACGGA 4 cut(s) 155, 243, 253, 1229
TspRI CASTG 2 cut(s) 497, 1974
Van91I CCANNNNNTGG 1 cut(s) 798
Vha464I CTTAAG 2 cut(s) 206, 1172
VpaK11BI GGWCC 2 cut(s) 163, 1804
XagI CCTNNNNNAGG 1 cut(s) 2070
XapI RAATTY 9 cut(s) 349, 413, 927, 949, 1159, 1166, 1299, 2318, 2333
XceI RCATGY 3 cut(s) 205, 1788, 1801
XmaJI CCTAGG 1 cut(s) 958
XmiI GTMKAC 1 cut(s) 51
XspI CTAG 6 cut(s) 176, 780, 959, 1910, 2343, 2393
ZraI GACGTC 1 cut(s) 233
ZrmI AGTACT 2 cut(s) 1780, 1889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.