FvH4_1g29201

Sucrose transport protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
21919130 .. 21926849
7720 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g29201.t1

Sequence Viewer

Length: 282 bp
ATGAACAAAGAAGATAGAGAGGAAGTGACACAGCGCGCCTCCACCCCAGAAGACTCCAGCAGCGTCCCCGATCACTTTCCCTCCCCGGTGAGTCCGTTCTTTTCCAGTTTTCCGACGAGATCACCCAAAACTTCAAACAAAGTCGATCTCGCCGGAAAACTAGAAATAAATGGACTCGCCGGGGAGGGAAAGTGGTCGGGGACGCTGCTGAAGTCTTCTGGGGTGGAGGCGTGCCTTCGCCAGCGCCGGAGGGTGGAGAACGAACGGACGTCCGCACTTTAA

Protein Analysis

94

Amino Acids

10.22

Weight (kDa)

7.91

Isoelectric Point (pI)

77.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000118)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01361 FvH4_1g07161 FvH4_1g07431 FvH4_1g07821 FvH4_1g08223 FvH4_1g10041 FvH4_1g12132 FvH4_1g15053 FvH4_1g18161 FvH4_1g18400 FvH4_1g18931 FvH4_1g19242 FvH4_1g19461 FvH4_1g20550 FvH4_1g21381 FvH4_1g21542 FvH4_1g22102 FvH4_1g23991 FvH4_1g24542 FvH4_1g24951 FvH4_1g24960 FvH4_1g25272 FvH4_1g25552 FvH4_1g25771 FvH4_1g28771 FvH4_1g29201 FvH4_1g29611 FvH4_2g01181 FvH4_2g02491 FvH4_2g04621 FvH4_2g04631 FvH4_2g07460 FvH4_2g08540 FvH4_2g08550 FvH4_2g09292 FvH4_2g10501 FvH4_2g12101 FvH4_2g12220 FvH4_2g12551 FvH4_2g14071 FvH4_2g14241 FvH4_2g15041 FvH4_2g15311 FvH4_2g18971 FvH4_2g19220 FvH4_2g19260 FvH4_2g19611 FvH4_2g19652 FvH4_2g20211 FvH4_2g20231 FvH4_2g21541 FvH4_2g22380 FvH4_2g27712 FvH4_2g28171 FvH4_2g29879 FvH4_2g32391 FvH4_3g02171 FvH4_3g05531 FvH4_3g09750 FvH4_3g10310 FvH4_3g10460 FvH4_3g13172 FvH4_3g15232 FvH4_3g18481 FvH4_3g18621 FvH4_3g20504 FvH4_3g20812 FvH4_3g22320 FvH4_3g22930 FvH4_3g22940 FvH4_3g23752 FvH4_3g24791 FvH4_3g26411 FvH4_3g26432 FvH4_3g27201 FvH4_3g27862 FvH4_3g28871 FvH4_3g28954 FvH4_3g29131 FvH4_3g29832 FvH4_3g29922 FvH4_3g30190 FvH4_3g32231 FvH4_3g32250 FvH4_3g33460 FvH4_3g34670 FvH4_3g36982 FvH4_3g37001 FvH4_3g38252 FvH4_3g38772 FvH4_3g40141 FvH4_3g40181 FvH4_3g42521 FvH4_4g00090 FvH4_4g00290 FvH4_4g00301 FvH4_4g00530 FvH4_4g00823 FvH4_4g02300 FvH4_4g02450 FvH4_4g03360 FvH4_4g04481 FvH4_4g04761 FvH4_4g06301 FvH4_4g06630 FvH4_4g08312 FvH4_4g08552 FvH4_4g10053 FvH4_4g11971 FvH4_4g13211 FvH4_4g13511 FvH4_4g15351 FvH4_4g16360 FvH4_4g16601 FvH4_4g18462 FvH4_4g22911 FvH4_4g23221 FvH4_4g24301 FvH4_4g24721 FvH4_4g27905 FvH4_4g28971 FvH4_4g29540 FvH4_4g30720 FvH4_4g31521 FvH4_4g33371 FvH4_4g34111 FvH4_4g35740 FvH4_5g00131 FvH4_5g02530 FvH4_5g02550 FvH4_5g02560 FvH4_5g02580 FvH4_5g03783 FvH4_5g05681 FvH4_5g05681 FvH4_5g09371 FvH4_5g09381 FvH4_5g14611 FvH4_5g15341 FvH4_5g19801 FvH4_5g20110 FvH4_5g20911 FvH4_5g22230 FvH4_5g25751 FvH4_5g26070 FvH4_5g26471 FvH4_5g27072 FvH4_5g27471 FvH4_5g27471 FvH4_5g27998 FvH4_5g28291 FvH4_5g30951 FvH4_5g31082 FvH4_5g31890 FvH4_5g32251 FvH4_5g34112 FvH4_5g37184 FvH4_5g37993 FvH4_5g38271 FvH4_6g00153 FvH4_6g00640 FvH4_6g05921 FvH4_6g08591 FvH4_6g09511 FvH4_6g10331 FvH4_6g10401 FvH4_6g14161 FvH4_6g14171 FvH4_6g18481 FvH4_6g19721 FvH4_6g19980 FvH4_6g20104 FvH4_6g20112 FvH4_6g21261 FvH4_6g21651 FvH4_6g22051 FvH4_6g23141 FvH4_6g24822 FvH4_6g25082 FvH4_6g25391 FvH4_6g25560 FvH4_6g26350 FvH4_6g27031 FvH4_6g27810 FvH4_6g27971 FvH4_6g28331 FvH4_6g29391 FvH4_6g30781 FvH4_6g32221 FvH4_6g34680 FvH4_6g36181 FvH4_6g36551 FvH4_6g37491 FvH4_6g37663 FvH4_6g39590 FvH4_6g40582 FvH4_6g43843 FvH4_6g50551 FvH4_7g00240 FvH4_7g00731 FvH4_7g01031 FvH4_7g03301 FvH4_7g08180 FvH4_7g08180 FvH4_7g10631 FvH4_7g19710 FvH4_7g23892 FvH4_7g25280 FvH4_7g25551 FvH4_7g30121 FvH4_7g31931 FvH4_7g32672 FvH4_c21g00040 FvH4_c2g00053
prunus_persica Prupe.1G448800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322451 RchiOBHm_Chr5g0015171
rosa_laevigata RLG00000003077 RLG00000018186 RLG00000030343
rosa_multiflora Rmu_co8096726.1_g000001
rosa_roxburghii Rroxscaffold_157G00438380 Rroxscaffold_1G00001730 Rroxscaffold_3G00236310
rosa_rugosa Rorug02G0236500
rosa_samantha Rh4BG247300 Rh6BG286200 Rh6CG287300 Rh7DG257500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 272
AccII CGCG 1 cut(s) 36
AciI CCGC 1 cut(s) 273
AcuI CTGAAG 1 cut(s) 230
AcyI GRCGYC 1 cut(s) 269
AfiI CCNNNNNNNGG 1 cut(s) 253
AgsI TTSAA 1 cut(s) 135
ApeKI GCWGC 2 cut(s) 60, 205
AspLEI GCGC 3 cut(s) 36, 38, 246
AsuC2I CCSGG 2 cut(s) 86, 181
AsuHPI GGTGA 2 cut(s) 100, 114
BbsI GAAGAC 2 cut(s) 57, 207
BbvI GCAGC 2 cut(s) 72, 192
BcnI CCSGG 2 cut(s) 86, 181
BfaI CTAG 1 cut(s) 161
BfoI RGCGCY 1 cut(s) 247
BisI GCNGC 2 cut(s) 61, 206
BlsI GCNGC 2 cut(s) 62, 207
Bme1390I CCNGG 2 cut(s) 86, 181
BmrFI CCNGG 2 cut(s) 86, 181
BpiI GAAGAC 2 cut(s) 57, 207
BpmI CTGGAG 1 cut(s) 40
BpuMI CCSGG 2 cut(s) 86, 181
BsaHI GRCGYC 1 cut(s) 269
BsaJI CCNNGG 2 cut(s) 84, 180
BsaXI ACNNNNNCTCC 4 cut(s) 65, 95, 176, 206
Bsc4I CCNNNNNNNGG 1 cut(s) 253
Bse1I ACTGG 1 cut(s) 105
BseDI CCNNGG 2 cut(s) 84, 180
BseLI CCNNNNNNNGG 1 cut(s) 253
BseNI ACTGG 1 cut(s) 105
BsePI GCGCGC 1 cut(s) 34
BseXI GCAGC 2 cut(s) 72, 192
Bsh1236I CGCG 1 cut(s) 36
BsiSI CCGG 4 cut(s) 86, 153, 180, 247
BslFI GGGAC 2 cut(s) 50, 214
BslI CCNNNNNNNGG 1 cut(s) 253
BsmFI GGGAC 2 cut(s) 50, 214
Bsp143I GATC 3 cut(s) 70, 119, 145
BspACI CCGC 1 cut(s) 273
BspFNI CGCG 1 cut(s) 36
BsrI ACTGG 1 cut(s) 105
BssECI CCNNGG 2 cut(s) 84, 180
BssHII GCGCGC 1 cut(s) 34
BssMI GATC 3 cut(s) 70, 119, 145
BssNI GRCGYC 1 cut(s) 269
BstACI GRCGYC 1 cut(s) 269
BstC8I GCNNGC 3 cut(s) 36, 232, 242
BstFNI CGCG 1 cut(s) 36
BstH2I RGCGCY 1 cut(s) 247
BstHHI GCGC 3 cut(s) 36, 38, 246
BstKTI GATC 3 cut(s) 73, 122, 148
BstMBI GATC 3 cut(s) 70, 119, 145
BstSCI CCNGG 2 cut(s) 84, 179
BstUI CGCG 1 cut(s) 36
BstV1I GCAGC 2 cut(s) 72, 192
BstV2I GAAGAC 2 cut(s) 57, 207
Cac8I GCNNGC 3 cut(s) 36, 232, 242
CfoI GCGC 3 cut(s) 36, 38, 246
CseI GACGC 2 cut(s) 52, 211
DpnI GATC 3 cut(s) 72, 121, 147
DpnII GATC 3 cut(s) 70, 119, 145
Eco57I CTGAAG 1 cut(s) 230
FaqI GGGAC 2 cut(s) 50, 214
Fnu4HI GCNGC 2 cut(s) 61, 206
Fsp4HI GCNGC 2 cut(s) 61, 206
FspBI CTAG 1 cut(s) 161
GlaI GCGC 3 cut(s) 35, 37, 245
GluI GCNGC 2 cut(s) 61, 206
GsuI CTGGAG 1 cut(s) 40
HaeII RGCGCY 1 cut(s) 247
HapII CCGG 4 cut(s) 86, 153, 180, 247
HgaI GACGC 2 cut(s) 52, 211
HhaI GCGC 3 cut(s) 36, 38, 246
Hin1I GRCGYC 1 cut(s) 269
Hin6I GCGC 3 cut(s) 34, 36, 244
HinP1I GCGC 3 cut(s) 34, 36, 244
HinfI GANTC 3 cut(s) 53, 91, 174
HpaII CCGG 4 cut(s) 86, 153, 180, 247
HphI GGTGA 2 cut(s) 100, 114
Hpy188I TCNGA 1 cut(s) 114
Hpy99I CGWCG 1 cut(s) 118
HpyAV CCTTC 1 cut(s) 245
HpyCH4IV ACGT 1 cut(s) 269
HpySE526I ACGT 1 cut(s) 269
Hsp92I GRCGYC 1 cut(s) 269
HspAI GCGC 3 cut(s) 34, 36, 244
Kzo9I GATC 3 cut(s) 70, 119, 145
LpnPI CCDG 9 cut(s) 60, 70, 99, 118, 166, 193, 204, 254, 260
Lsp1109I GCAGC 2 cut(s) 72, 192
MaeI CTAG 1 cut(s) 161
MaeII ACGT 1 cut(s) 269
MaeIII GTNAC 1 cut(s) 25
MalI GATC 3 cut(s) 72, 121, 147
MboI GATC 3 cut(s) 70, 119, 145
MboII GAAGA 3 cut(s) 23, 62, 207
MlyI GAGTC 3 cut(s) 47, 100, 168
MmeI TCCRAC 1 cut(s) 137
MnlI CCTC 6 cut(s) 13, 49, 91, 178, 220, 243
MseI TTAA 1 cut(s) 280
MspI CCGG 4 cut(s) 86, 153, 180, 247
MspR9I CCNGG 2 cut(s) 86, 181
MvnI CGCG 1 cut(s) 36
NciI CCSGG 2 cut(s) 86, 181
NdeII GATC 3 cut(s) 70, 119, 145
NmuCI GTSAC 1 cut(s) 25
PauI GCGCGC 1 cut(s) 34
PkrI GCNGC 2 cut(s) 62, 207
PleI GAGTC 3 cut(s) 47, 99, 168
PpsI GAGTC 3 cut(s) 47, 99, 168
PteI GCGCGC 1 cut(s) 34
SaqAI TTAA 1 cut(s) 280
SatI GCNGC 2 cut(s) 61, 206
Sau3AI GATC 3 cut(s) 70, 119, 145
SchI GAGTC 3 cut(s) 47, 100, 168
ScrFI CCNGG 2 cut(s) 86, 181
SetI ASST 1 cut(s) 272
SsiI CCGC 1 cut(s) 273
SspMI CTAG 1 cut(s) 161
StyD4I CCNGG 2 cut(s) 84, 179
TaiI ACGT 1 cut(s) 272
TaqI TCGA 1 cut(s) 144
Tru1I TTAA 1 cut(s) 280
Tru9I TTAA 1 cut(s) 280
TseFI GTSAC 1 cut(s) 25
TseI GCWGC 2 cut(s) 60, 205
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 84, 280
XspI CTAG 1 cut(s) 161
ZraI GACGTC 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.