FvH4_1g25771

protein dimerization activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000118
Physical Location & Seq
Forward (+)
17706579 .. 17709810
3232 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g25771.t1

Sequence Viewer

Length: 1413 bp
ATGCCAAAGAGGAATATCGATATTGATGTTCCTTATAGGTGGAATTTCACCGATGAGCTGCTACAATTGGCTGAAAAGTATAAGTATGTTTTGAATCGCTATGTTCAGAAACTTAACCAATCTAATCGCCATTCCACCTTAGCATTTCCCACTGAAGAAGATTGGTTAATATCTAGCATTGTGTGTCGTTTTTTAAAAGTTTTTGATTCTTCAACAACAAACTTGTGTGGTGTGTATTATCCAACCTCATGTCGTGTTATTCCATGCTTAGTAAGGATCAATGCAACTTTTAATAAATATGCTTGCTATCCTATAATTGCTGCTGCGTTGGTTGCCATGAAGTCAAAATTTTCTAAGTATTGGAAAAGTTTTCCTCTTGTATTTTGTCTTGCTGTTGCTTTGGATCCTAGGTACAAGTTTTTTGCAATTGGTCCATGGATGAAAAGTATGGGTCTGGATGAACGGGAAGTTGAATCTGGTATATCTACTCTAAAGAATCAGTTGTTTAAATTACACGATATGTACAAGGACAATGTAGTGCCTATGGTTCCAACCTCTAGTGTTACCTCAAATTTACCTACATCTTCTGATTCTGTTGTTTTACCTAACGATGAAGATAAGAACTTTGCTGAGGTTGTCTTAAAAAAGGCTAAGACAACAACTTCTACTTCTAGTGCTTCAACTCGTGACCTGTTATCTGTTCCAGCTTCAACAGTGACTTCGAAAGCCGCTTTTAGTGTCGGTGGGAGAGTTGTATCAGAGAAGAGAGCAAGTCTTAGTCCAAGTACAATTCAAGCTCTTATTTGCTTGAAAGATTGGAAGCTGGCAGATGCAAGGCTACAAGATAAGGACCCAGCCCTTTTGGCCCTTGCAGAATGGGTTTTTAAGGCGAGTAAGGGTTTACATATTGCAGCCTCAGCCCGGCCCTACCCGGCCCTAAGCTCTGTTGACTTAGGAGAGGATCTAAAGAGGACGTTTGCACAGCCCTTAAAGTGCGGACGTCCTTTCGTTCTCCTCCGTACAGCTCCGACAACGGCGTGCCTCCACCCCAGCAGCCTCCAACAGCGTCCCCGATCACTTTCCCTCCCCGGTCAGTCCTCCGAATTCCAGTTTTTCGGCAAGATCACCCAAAACTTCATACAAAATCGATCTCGCCAGAAAACTGAAATTCGACTGACTCACCGGGGAGGAAAAGTAATCGGGGACGCTGCTGGACGCCGCTGGGGTGGTGGCGTCGCGTCGTCGGAGTCGTACAGTGGAGAACGGAGACACGTCCGCGCTTTAAGGCTCCGTTCGCCACCGTCGGCGCGCCTCCCCCCCAAAAGACTCCAGCAGCATCCTCGACCACTTTCCCTCCCCGGCGAGTCCGTTCTTTTTCAGTTTTCCGGCGAGATCACCCAAAACTTCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4413 Dimer_Tnp_hAT

Protein Analysis

471

Amino Acids

52.52

Weight (kDa)

9.84

Isoelectric Point (pI)

53.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
hAT-like_RNase-H PF14372 78 - 174 8.2e-11 hAT-like transposase, RNase-H fold
Dimer_Tnp_hAT PF05699 216 - 273 2e-12 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000118)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01361 FvH4_1g07161 FvH4_1g07431 FvH4_1g07821 FvH4_1g08223 FvH4_1g10041 FvH4_1g12132 FvH4_1g15053 FvH4_1g18161 FvH4_1g18400 FvH4_1g18931 FvH4_1g19242 FvH4_1g19461 FvH4_1g20550 FvH4_1g21381 FvH4_1g21542 FvH4_1g22102 FvH4_1g23991 FvH4_1g24542 FvH4_1g24951 FvH4_1g24960 FvH4_1g25272 FvH4_1g25552 FvH4_1g25771 FvH4_1g28771 FvH4_1g29201 FvH4_1g29611 FvH4_2g01181 FvH4_2g02491 FvH4_2g04621 FvH4_2g04631 FvH4_2g07460 FvH4_2g08540 FvH4_2g08550 FvH4_2g09292 FvH4_2g10501 FvH4_2g12101 FvH4_2g12220 FvH4_2g12551 FvH4_2g14071 FvH4_2g14241 FvH4_2g15041 FvH4_2g15311 FvH4_2g18971 FvH4_2g19220 FvH4_2g19260 FvH4_2g19611 FvH4_2g19652 FvH4_2g20211 FvH4_2g20231 FvH4_2g21541 FvH4_2g22380 FvH4_2g27712 FvH4_2g28171 FvH4_2g29879 FvH4_2g32391 FvH4_3g02171 FvH4_3g05531 FvH4_3g09750 FvH4_3g10310 FvH4_3g10460 FvH4_3g13172 FvH4_3g15232 FvH4_3g18481 FvH4_3g18621 FvH4_3g20504 FvH4_3g20812 FvH4_3g22320 FvH4_3g22930 FvH4_3g22940 FvH4_3g23752 FvH4_3g24791 FvH4_3g26411 FvH4_3g26432 FvH4_3g27201 FvH4_3g27862 FvH4_3g28871 FvH4_3g28954 FvH4_3g29131 FvH4_3g29832 FvH4_3g29922 FvH4_3g30190 FvH4_3g32231 FvH4_3g32250 FvH4_3g33460 FvH4_3g34670 FvH4_3g36982 FvH4_3g37001 FvH4_3g38252 FvH4_3g38772 FvH4_3g40141 FvH4_3g40181 FvH4_3g42521 FvH4_4g00090 FvH4_4g00290 FvH4_4g00301 FvH4_4g00530 FvH4_4g00823 FvH4_4g02300 FvH4_4g02450 FvH4_4g03360 FvH4_4g04481 FvH4_4g04761 FvH4_4g06301 FvH4_4g06630 FvH4_4g08312 FvH4_4g08552 FvH4_4g10053 FvH4_4g11971 FvH4_4g13211 FvH4_4g13511 FvH4_4g15351 FvH4_4g16360 FvH4_4g16601 FvH4_4g18462 FvH4_4g22911 FvH4_4g23221 FvH4_4g24301 FvH4_4g24721 FvH4_4g27905 FvH4_4g28971 FvH4_4g29540 FvH4_4g30720 FvH4_4g31521 FvH4_4g33371 FvH4_4g34111 FvH4_4g35740 FvH4_5g00131 FvH4_5g02530 FvH4_5g02550 FvH4_5g02560 FvH4_5g02580 FvH4_5g03783 FvH4_5g05681 FvH4_5g05681 FvH4_5g09371 FvH4_5g09381 FvH4_5g14611 FvH4_5g15341 FvH4_5g19801 FvH4_5g20110 FvH4_5g20911 FvH4_5g22230 FvH4_5g25751 FvH4_5g26070 FvH4_5g26471 FvH4_5g27072 FvH4_5g27471 FvH4_5g27471 FvH4_5g27998 FvH4_5g28291 FvH4_5g30951 FvH4_5g31082 FvH4_5g31890 FvH4_5g32251 FvH4_5g34112 FvH4_5g37184 FvH4_5g37993 FvH4_5g38271 FvH4_6g00153 FvH4_6g00640 FvH4_6g05921 FvH4_6g08591 FvH4_6g09511 FvH4_6g10331 FvH4_6g10401 FvH4_6g14161 FvH4_6g14171 FvH4_6g18481 FvH4_6g19721 FvH4_6g19980 FvH4_6g20104 FvH4_6g20112 FvH4_6g21261 FvH4_6g21651 FvH4_6g22051 FvH4_6g23141 FvH4_6g24822 FvH4_6g25082 FvH4_6g25391 FvH4_6g25560 FvH4_6g26350 FvH4_6g27031 FvH4_6g27810 FvH4_6g27971 FvH4_6g28331 FvH4_6g29391 FvH4_6g30781 FvH4_6g32221 FvH4_6g34680 FvH4_6g36181 FvH4_6g36551 FvH4_6g37491 FvH4_6g37663 FvH4_6g39590 FvH4_6g40582 FvH4_6g43843 FvH4_6g50551 FvH4_7g00240 FvH4_7g00731 FvH4_7g01031 FvH4_7g03301 FvH4_7g08180 FvH4_7g08180 FvH4_7g10631 FvH4_7g19710 FvH4_7g23892 FvH4_7g25280 FvH4_7g25551 FvH4_7g30121 FvH4_7g31931 FvH4_7g32672 FvH4_c21g00040 FvH4_c2g00053
prunus_persica Prupe.1G448800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322451 RchiOBHm_Chr5g0015171
rosa_laevigata RLG00000003077 RLG00000018186 RLG00000030343
rosa_multiflora Rmu_co8096726.1_g000001
rosa_roxburghii Rroxscaffold_157G00438380 Rroxscaffold_1G00001730 Rroxscaffold_3G00236310
rosa_rugosa Rorug02G0236500
rosa_samantha Rh4BG247300 Rh6BG286200 Rh6CG287300 Rh7DG257500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1003
AccII CGCG 3 cut(s) 1238, 1278, 1309
AciI CCGC 4 cut(s) 729, 996, 1219, 1276
AclWI GGATC 4 cut(s) 284, 398, 411, 969
AcsI RAATTY 5 cut(s) 43, 347, 571, 1103, 1167
AcuI CTGAAG 1 cut(s) 174
AcyI GRCGYC 3 cut(s) 1000, 1216, 1233
AfaI GTAC 5 cut(s) 413, 524, 787, 1021, 1253
AfiI CCNNNNNNNGG 1 cut(s) 921
AflIII ACRYGT 1 cut(s) 1270
AgsI TTSAA 8 cut(s) 94, 213, 473, 681, 711, 794, 811, 1408
AjiI CACGTC 1 cut(s) 1273
AluBI AGCT 6 cut(s) 58, 707, 797, 823, 942, 1025
AluI AGCT 6 cut(s) 58, 707, 797, 823, 942, 1025
Alw26I GTCTC 1 cut(s) 1261
AlwI GGATC 4 cut(s) 284, 398, 411, 969
AoxI GGCC 3 cut(s) 864, 923, 933
ApeKI GCWGC 7 cut(s) 58, 320, 323, 911, 1053, 1208, 1333
ApoI RAATTY 5 cut(s) 43, 347, 571, 1103, 1167
AscI GGCGCGCC 1 cut(s) 1307
AspA2I CCTAGG 1 cut(s) 407
AspLEI GCGC 3 cut(s) 1280, 1309, 1311
AspS9I GGNCC 5 cut(s) 431, 850, 865, 924, 934
AsuC2I CCSGG 5 cut(s) 922, 932, 1089, 1184, 1359
AsuHPI GGTGA 4 cut(s) 40, 1117, 1172, 1387
AsuII TTCGAA 1 cut(s) 722
AvaII GGWCC 2 cut(s) 431, 850
AvrII CCTAGG 1 cut(s) 407
BamHI GGATCC 1 cut(s) 403
BauI CACGAG 1 cut(s) 684
BbvCI CCTCAGC 2 cut(s) 630, 916
BbvI GCAGC 7 cut(s) 45, 307, 310, 923, 1065, 1195, 1345
BceAI ACGGC 1 cut(s) 1050
BcgI CGANNNNNNTGC 2 cut(s) 1322, 1356
BcnI CCSGG 5 cut(s) 922, 932, 1089, 1184, 1359
BcoDI GTCTC 1 cut(s) 1261
BfaI CTAG 4 cut(s) 174, 408, 558, 672
BglI GCCNNNNNGGC 1 cut(s) 863
BisI GCNGC 9 cut(s) 59, 321, 324, 729, 912, 1054, 1209, 1219, 1334
BlnI CCTAGG 1 cut(s) 407
BlsI GCNGC 9 cut(s) 60, 322, 325, 730, 913, 1055, 1210, 1220, 1335
Bme1390I CCNGG 5 cut(s) 922, 932, 1089, 1184, 1359
Bme18I GGWCC 2 cut(s) 431, 850
BmgBI CACGTC 1 cut(s) 1273
BmgT120I GGNCC 5 cut(s) 431, 850, 865, 924, 934
BmiI GGNNCC 4 cut(s) 405, 549, 852, 1289
BmrFI CCNGG 5 cut(s) 922, 932, 1089, 1184, 1359
BmsI GCATC 2 cut(s) 820, 1345
BpmI CTGGAG 1 cut(s) 1313
Bpu10I CCTNAGC 4 cut(s) 139, 630, 916, 938
Bpu14I TTCGAA 1 cut(s) 722
BpuMI CCSGG 5 cut(s) 922, 932, 1089, 1184, 1359
Bsa29I ATCGAT 2 cut(s) 18, 1147
BsaHI GRCGYC 3 cut(s) 1000, 1216, 1233
BsaJI CCNNGG 5 cut(s) 407, 434, 1087, 1183, 1357
BsaXI ACNNNNNCTCC 6 cut(s) 1068, 1098, 1179, 1209, 1338, 1368
Bsc4I CCNNNNNNNGG 1 cut(s) 921
Bse1I ACTGG 1 cut(s) 1108
BseCI ATCGAT 2 cut(s) 18, 1147
BseDI CCNNGG 5 cut(s) 407, 434, 1087, 1183, 1357
BseGI GGATG 3 cut(s) 444, 463, 1336
BseLI CCNNNNNNNGG 1 cut(s) 921
BseMII CTCAG 2 cut(s) 621, 930
BseNI ACTGG 1 cut(s) 1108
BsePI GCGCGC 1 cut(s) 1307
BseRI GAGGAG 1 cut(s) 1004
BseXI GCAGC 7 cut(s) 45, 307, 310, 923, 1065, 1195, 1345
BseYI CCCAGC 3 cut(s) 853, 1049, 1221
Bsh1236I CGCG 3 cut(s) 1238, 1278, 1309
BshFI GGCC 3 cut(s) 866, 925, 935
BshVI ATCGAT 2 cut(s) 18, 1147
BsiSI CCGG 6 cut(s) 922, 932, 1089, 1183, 1359, 1386
BslFI GGGAC 2 cut(s) 1053, 1217
BslI CCNNNNNNNGG 1 cut(s) 921
BsmAI GTCTC 1 cut(s) 1261
BsmFI GGGAC 2 cut(s) 1053, 1217
BsnI GGCC 3 cut(s) 866, 925, 935
Bsp119I TTCGAA 1 cut(s) 722
Bsp1407I TGTACA 1 cut(s) 522
Bsp143I GATC 7 cut(s) 276, 403, 961, 1073, 1122, 1148, 1392
Bsp19I CCATGG 1 cut(s) 434
BspACI CCGC 4 cut(s) 729, 996, 1219, 1276
BspANI GGCC 3 cut(s) 866, 925, 935
BspCNI CTCAG 2 cut(s) 622, 929
BspDI ATCGAT 2 cut(s) 18, 1147
BspFNI CGCG 3 cut(s) 1238, 1278, 1309
BspLI GGNNCC 4 cut(s) 405, 549, 852, 1289
BspPI GGATC 4 cut(s) 284, 398, 411, 969
BspT104I TTCGAA 1 cut(s) 722
BsrGI TGTACA 1 cut(s) 522
BsrI ACTGG 1 cut(s) 1108
BssECI CCNNGG 5 cut(s) 407, 434, 1087, 1183, 1357
BssHII GCGCGC 1 cut(s) 1307
BssMI GATC 7 cut(s) 276, 403, 961, 1073, 1122, 1148, 1392
BssNI GRCGYC 3 cut(s) 1000, 1216, 1233
BssSI CACGAG 1 cut(s) 684
BssT1I CCWWGG 2 cut(s) 407, 434
Bst2BI CACGAG 1 cut(s) 684
Bst4CI ACNGT 3 cut(s) 715, 1256, 1302
Bst6I CTCTTC 1 cut(s) 758
BstACI GRCGYC 3 cut(s) 1000, 1216, 1233
BstAUI TGTACA 1 cut(s) 522
BstBI TTCGAA 1 cut(s) 722
BstC8I GCNNGC 4 cut(s) 304, 825, 1039, 1309
BstDEI CTNAG 9 cut(s) 139, 268, 354, 630, 651, 776, 916, 938, 952
BstDSI CCRYGG 1 cut(s) 434
BstF5I GGATG 3 cut(s) 444, 463, 1336
BstFNI CGCG 3 cut(s) 1238, 1278, 1309
BstHHI GCGC 3 cut(s) 1280, 1309, 1311
BstKTI GATC 7 cut(s) 279, 406, 964, 1076, 1125, 1151, 1395
BstMAI GTCTC 1 cut(s) 1261
BstMBI GATC 7 cut(s) 276, 403, 961, 1073, 1122, 1148, 1392
BstMWI GCNNNNNNNGC 4 cut(s) 332, 863, 917, 1294
BstSCI CCNGG 5 cut(s) 920, 930, 1087, 1182, 1357
BstUI CGCG 3 cut(s) 1238, 1278, 1309
BstV1I GCAGC 7 cut(s) 45, 307, 310, 923, 1065, 1195, 1345
BstX2I RGATCY 2 cut(s) 403, 961
BstYI RGATCY 2 cut(s) 403, 961
Bsu15I ATCGAT 2 cut(s) 18, 1147
BsuRI GGCC 3 cut(s) 866, 925, 935
BsuTUI ATCGAT 2 cut(s) 18, 1147
BtgI CCRYGG 1 cut(s) 434
BtrI CACGTC 1 cut(s) 1273
BtsCI GGATG 3 cut(s) 444, 463, 1336
BtsIMutI CAGTG 3 cut(s) 150, 720, 1261
Cac8I GCNNGC 4 cut(s) 304, 825, 1039, 1309
CfoI GCGC 3 cut(s) 1280, 1309, 1311
Cfr13I GGNCC 5 cut(s) 431, 850, 865, 924, 934
ClaI ATCGAT 2 cut(s) 18, 1147
CseI GACGC 5 cut(s) 1055, 1214, 1222, 1224, 1227
Csp6I GTAC 5 cut(s) 412, 523, 786, 1020, 1252
CviAII CATG 4 cut(s) 249, 264, 337, 435
CviQI GTAC 5 cut(s) 412, 523, 786, 1020, 1252
DdeI CTNAG 9 cut(s) 139, 268, 354, 630, 651, 776, 916, 938, 952
DpnI GATC 7 cut(s) 278, 405, 963, 1075, 1124, 1150, 1394
DpnII GATC 7 cut(s) 276, 403, 961, 1073, 1122, 1148, 1392
DraI TTTAAA 2 cut(s) 195, 508
Eam1104I CTCTTC 1 cut(s) 758
EarI CTCTTC 1 cut(s) 758
Eco130I CCWWGG 2 cut(s) 407, 434
Eco47I GGWCC 2 cut(s) 431, 850
Eco57I CTGAAG 1 cut(s) 174
EcoO109I RGGNCCY 1 cut(s) 850
EcoRI GAATTC 1 cut(s) 1103
EcoT14I CCWWGG 2 cut(s) 407, 434
ErhI CCWWGG 2 cut(s) 407, 434
FaeI CATG 4 cut(s) 252, 267, 340, 438
FaqI GGGAC 2 cut(s) 1053, 1217
FatI CATG 4 cut(s) 248, 263, 336, 434
Fnu4HI GCNGC 9 cut(s) 59, 321, 324, 729, 912, 1054, 1209, 1219, 1334
FokI GGATG 3 cut(s) 451, 470, 1323
Fsp4HI GCNGC 9 cut(s) 59, 321, 324, 729, 912, 1054, 1209, 1219, 1334
FspBI CTAG 4 cut(s) 174, 408, 558, 672
GlaI GCGC 3 cut(s) 1279, 1308, 1310
GluI GCNGC 9 cut(s) 59, 321, 324, 729, 912, 1054, 1209, 1219, 1334
GsaI CCCAGC 3 cut(s) 857, 1053, 1225
GsuI CTGGAG 1 cut(s) 1313
HaeIII GGCC 3 cut(s) 866, 925, 935
HapII CCGG 6 cut(s) 922, 932, 1089, 1183, 1359, 1386
HgaI GACGC 5 cut(s) 1055, 1214, 1222, 1224, 1227
HhaI GCGC 3 cut(s) 1280, 1309, 1311
Hin1I GRCGYC 3 cut(s) 1000, 1216, 1233
Hin1II CATG 4 cut(s) 252, 267, 340, 438
Hin6I GCGC 3 cut(s) 1278, 1307, 1309
HinP1I GCGC 3 cut(s) 1278, 1307, 1309
HincII GTYRAC 1 cut(s) 949
HindII GTYRAC 1 cut(s) 949
HinfI GANTC 9 cut(s) 94, 206, 473, 496, 590, 1177, 1247, 1326, 1364
HpaII CCGG 6 cut(s) 922, 932, 1089, 1183, 1359, 1386
HphI GGTGA 4 cut(s) 40, 1117, 1172, 1387
Hpy166II GTNNAC 2 cut(s) 902, 949
Hpy188I TCNGA 6 cut(s) 108, 589, 760, 1029, 1102, 1246
Hpy188III TCNNGA 2 cut(s) 455, 686
Hpy8I GTNNAC 2 cut(s) 902, 949
Hpy99I CGWCG 4 cut(s) 1238, 1243, 1246, 1306
HpyCH4III ACNGT 3 cut(s) 715, 1256, 1302
HpyCH4IV ACGT 3 cut(s) 974, 1000, 1272
HpyCH4V TGCA 6 cut(s) 284, 425, 833, 872, 911, 980
HpyF10VI GCNNNNNNNGC 4 cut(s) 332, 863, 917, 1294
HpyF3I CTNAG 9 cut(s) 139, 268, 354, 630, 651, 776, 916, 938, 952
HpySE526I ACGT 3 cut(s) 974, 1000, 1272
Hsp92I GRCGYC 3 cut(s) 1000, 1216, 1233
Hsp92II CATG 4 cut(s) 252, 267, 340, 438
HspAI GCGC 3 cut(s) 1278, 1307, 1309
Kzo9I GATC 7 cut(s) 276, 403, 961, 1073, 1122, 1148, 1392
LmnI GCTCC 2 cut(s) 1030, 1293
Lsp1109I GCAGC 7 cut(s) 45, 307, 310, 923, 1065, 1195, 1345
LweI GCATC 2 cut(s) 820, 1345
MaeI CTAG 4 cut(s) 174, 408, 558, 672
MaeII ACGT 3 cut(s) 974, 1000, 1272
MaeIII GTNAC 3 cut(s) 562, 686, 715
MalI GATC 7 cut(s) 278, 405, 963, 1075, 1124, 1150, 1394
MboI GATC 7 cut(s) 276, 403, 961, 1073, 1122, 1148, 1392
MboII GAAGA 6 cut(s) 167, 170, 201, 576, 626, 775
MfeI CAATTG 2 cut(s) 65, 426
MflI RGATCY 2 cut(s) 403, 961
MlyI GAGTC 4 cut(s) 1171, 1256, 1320, 1373
MmeI TCCRAC 5 cut(s) 266, 575, 1052, 1084, 1224
MseI TTAA 9 cut(s) 114, 167, 194, 291, 507, 641, 885, 989, 1283
MspA1I CMGCKG 1 cut(s) 1221
MspI CCGG 6 cut(s) 922, 932, 1089, 1183, 1359, 1386
MspR9I CCNGG 5 cut(s) 922, 932, 1089, 1184, 1359
MunI CAATTG 2 cut(s) 65, 426
MvnI CGCG 3 cut(s) 1238, 1278, 1309
MwoI GCNNNNNNNGC 4 cut(s) 332, 863, 917, 1294
NciI CCSGG 5 cut(s) 922, 932, 1089, 1184, 1359
NcoI CCATGG 1 cut(s) 434
NdeII GATC 7 cut(s) 276, 403, 961, 1073, 1122, 1148, 1392
NlaIII CATG 4 cut(s) 252, 267, 340, 438
NlaIV GGNNCC 4 cut(s) 405, 549, 852, 1289
NmuCI GTSAC 2 cut(s) 686, 715
NspV TTCGAA 1 cut(s) 722
PalAI GGCGCGCC 1 cut(s) 1307
PauI GCGCGC 1 cut(s) 1307
PcsI WCGNNNNNNNCGW 1 cut(s) 1247
PfeI GAWTC 5 cut(s) 94, 206, 473, 496, 590
PkrI GCNGC 9 cut(s) 60, 322, 325, 730, 913, 1055, 1210, 1220, 1335
PleI GAGTC 4 cut(s) 1171, 1255, 1320, 1372
PpsI GAGTC 4 cut(s) 1171, 1255, 1320, 1372
PpuMI RGGWCCY 1 cut(s) 850
Psp5II RGGWCCY 1 cut(s) 850
PspFI CCCAGC 3 cut(s) 853, 1049, 1221
PspN4I GGNNCC 4 cut(s) 405, 549, 852, 1289
PspPI GGNCC 5 cut(s) 431, 850, 865, 924, 934
PspPPI RGGWCCY 1 cut(s) 850
PsuI RGATCY 2 cut(s) 403, 961
PteI GCGCGC 1 cut(s) 1307
RsaI GTAC 5 cut(s) 413, 524, 787, 1021, 1253
RsaNI GTAC 5 cut(s) 412, 523, 786, 1020, 1252
SaqAI TTAA 9 cut(s) 114, 167, 194, 291, 507, 641, 885, 989, 1283
SatI GCNGC 9 cut(s) 59, 321, 324, 729, 912, 1054, 1209, 1219, 1334
Sau3AI GATC 7 cut(s) 276, 403, 961, 1073, 1122, 1148, 1392
Sau96I GGNCC 5 cut(s) 431, 850, 865, 924, 934
SchI GAGTC 4 cut(s) 1171, 1256, 1320, 1373
ScrFI CCNGG 5 cut(s) 922, 932, 1089, 1184, 1359
SfaNI GCATC 2 cut(s) 820, 1345
SfuI TTCGAA 1 cut(s) 722
SgsI GGCGCGCC 1 cut(s) 1307
SinI GGWCC 2 cut(s) 431, 850
SsiI CCGC 4 cut(s) 729, 996, 1219, 1276
SspMI CTAG 4 cut(s) 174, 408, 558, 672
StyD4I CCNGG 5 cut(s) 920, 930, 1087, 1182, 1357
StyI CCWWGG 2 cut(s) 407, 434
TaaI ACNGT 3 cut(s) 715, 1256, 1302
TaiI ACGT 3 cut(s) 977, 1003, 1275
TaqI TCGA 5 cut(s) 18, 722, 1147, 1171, 1342
TatI WGTACW 2 cut(s) 522, 785
TauI GCSGC 2 cut(s) 731, 1221
TfiI GAWTC 5 cut(s) 94, 206, 473, 496, 590
Tru1I TTAA 9 cut(s) 114, 167, 194, 291, 507, 641, 885, 989, 1283
Tru9I TTAA 9 cut(s) 114, 167, 194, 291, 507, 641, 885, 989, 1283
TscAI CASTG 3 cut(s) 157, 720, 1261
TseFI GTSAC 2 cut(s) 686, 715
TseI GCWGC 7 cut(s) 58, 320, 323, 911, 1053, 1208, 1333
Tsp45I GTSAC 2 cut(s) 686, 715
TspDTI ATGAA 5 cut(s) 353, 455, 474, 627, 1126
TspGWI ACGGA 4 cut(s) 1007, 1279, 1280, 1357
TspRI CASTG 3 cut(s) 157, 720, 1261
VpaK11BI GGWCC 2 cut(s) 431, 850
XapI RAATTY 5 cut(s) 43, 347, 571, 1103, 1167
XmaJI CCTAGG 1 cut(s) 407
XspI CTAG 4 cut(s) 174, 408, 558, 672
ZraI GACGTC 1 cut(s) 1001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.