Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000118

Physical Location & Seq

Genomic Coordinates Reverse (-)

28701640 .. 28703822

Gene Structure 2183 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g27905.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1029 bp

ATGAAGTTCTCTTGCCGGCGAGATCGATTTAAAGGTCTGGGTAGCAACCTCCACCCAAAACTTCAGACAAGATCGATCTCGGCTGCAAACTGGTATTCAGCGAGTCCGCCGGCAAGGGAAAGTGATCGGCGATGCCTCTGTTGTCTGCTCGGGTGGAGGCGCACCGTCGTTGGCGCCGGTCGGTGGAGAATGGAGGGACGTCCGCATTTTAAGCTCAGTGTGGACATAATAAGTGTATGTGTACGAGCAGCTATGAGTGTGTTGATTTACAAGAAGTCTATTTCGATCAAGTATTCTGGTCCAAGCAATGGGAGAATGATTAATTTGATCAATGTGGATGTAGAAAGAATTGGAGATTTCTGTTGGTACCAATGTTTTAAAAGGCTAAGGCGTAGCCAAGGCTATGGAGCGAGAGCCTCACCAAGGCAAGACAGCGACGAGGCGATGGTCGACTGGTCGTATGGTCGGAATCCTGGTGGTGGTCAGATGGTCGGTGGTGGTCGATGGTCGGATGGTCTATGGTGGTCGCGATTCACGAACTGGTGGAATCCTGGTGGTGGTCAATTGTGTCTCTGTGTTCGAGAGGGAGAGGGAGCAGAGAAGGAGGGCGAAAAGATAGAGGGAGGCGCACGACCCCCAGCCTTATGTGAAACACTTACCCAAAACGACCCCGTTTTCCTGGTTTTGGCCTTGGTTATTCTTTACAAAAATCTCGGCGCTGCCCCCTCTGCTGCTGCTCTCATTGCCACAGTTTTGGTCATGGTATGCAACACACCTCTGGCCAATATGCAAGAAAAGCTTCATTCCAAGATGATGGAAGCAAAAGATTCACGAATCAAAGTAACATCAGAGACTCTCAAAAGCATGCGAGTTTTAAAGCTGCATTCTTTGGAATCAACATTCTTGAAGAAGCTGCTTATGCTGAGGGAAACTGAGAGGAGTTGGCTGAAGAGATACCTCTATACATGCTCAGTAGTGGCTTTTCTCTTTTGGGTGTCACCTATGACAGCTTTGATACTAGAAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0010290 GO:0015399 GO:0015405 GO:0015431 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071997 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04071 ko04976 ko04977 ko05206 map01523 map01524 map02010 map04071 map04976 map04977 map05206

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

343

Amino Acids

38.57

Weight (kDa)

9.71

Isoelectric Point (pI)

42.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	224 - 338	2.3e-08	ABC transporter transmembrane region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000118)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g01361 FvH4_1g07161 FvH4_1g07431 FvH4_1g07821 FvH4_1g08223 FvH4_1g10041 FvH4_1g12132 FvH4_1g15053 FvH4_1g18161 FvH4_1g18400 FvH4_1g18931 FvH4_1g19242 FvH4_1g19461 FvH4_1g20550 FvH4_1g21381 FvH4_1g21542 FvH4_1g22102 FvH4_1g23991 FvH4_1g24542 FvH4_1g24951 FvH4_1g24960 FvH4_1g25272 FvH4_1g25552 FvH4_1g25771 FvH4_1g28771 FvH4_1g29201 FvH4_1g29611 FvH4_2g01181 FvH4_2g02491 FvH4_2g04621 FvH4_2g04631 FvH4_2g07460 FvH4_2g08540 FvH4_2g08550 FvH4_2g09292 FvH4_2g10501 FvH4_2g12101 FvH4_2g12220 FvH4_2g12551 FvH4_2g14071 FvH4_2g14241 FvH4_2g15041 FvH4_2g15311 FvH4_2g18971 FvH4_2g19220 FvH4_2g19260 FvH4_2g19611 FvH4_2g19652 FvH4_2g20211 FvH4_2g20231 FvH4_2g21541 FvH4_2g22380 FvH4_2g27712 FvH4_2g28171 FvH4_2g29879 FvH4_2g32391 FvH4_3g02171 FvH4_3g05531 FvH4_3g09750 FvH4_3g10310 FvH4_3g10460 FvH4_3g13172 FvH4_3g15232 FvH4_3g18481 FvH4_3g18621 FvH4_3g20504 FvH4_3g20812 FvH4_3g22320 FvH4_3g22930 FvH4_3g22940 FvH4_3g23752 FvH4_3g24791 FvH4_3g26411 FvH4_3g26432 FvH4_3g27201 FvH4_3g27862 FvH4_3g28871 FvH4_3g28954 FvH4_3g29131 FvH4_3g29832 FvH4_3g29922 FvH4_3g30190 FvH4_3g32231 FvH4_3g32250 FvH4_3g33460 FvH4_3g34670 FvH4_3g36982 FvH4_3g37001 FvH4_3g38252 FvH4_3g38772 FvH4_3g40141 FvH4_3g40181 FvH4_3g42521 FvH4_4g00090 FvH4_4g00290 FvH4_4g00301 FvH4_4g00530 FvH4_4g00823 FvH4_4g02300 FvH4_4g02450 FvH4_4g03360 FvH4_4g04481 FvH4_4g04761 FvH4_4g06301 FvH4_4g06630 FvH4_4g08312 FvH4_4g08552 FvH4_4g10053 FvH4_4g11971 FvH4_4g13211 FvH4_4g13511 FvH4_4g15351 FvH4_4g16360 FvH4_4g16601 FvH4_4g18462 FvH4_4g22911 FvH4_4g23221 FvH4_4g24301 FvH4_4g24721 FvH4_4g27905 FvH4_4g28971 FvH4_4g29540 FvH4_4g30720 FvH4_4g31521 FvH4_4g33371 FvH4_4g34111 FvH4_4g35740 FvH4_5g00131 FvH4_5g02530 FvH4_5g02550 FvH4_5g02560 FvH4_5g02580 FvH4_5g03783 FvH4_5g05681 FvH4_5g05681 FvH4_5g09371 FvH4_5g09381 FvH4_5g14611 FvH4_5g15341 FvH4_5g19801 FvH4_5g20110 FvH4_5g20911 FvH4_5g22230 FvH4_5g25751 FvH4_5g26070 FvH4_5g26471 FvH4_5g27072 FvH4_5g27471 FvH4_5g27471 FvH4_5g27998 FvH4_5g28291 FvH4_5g30951 FvH4_5g31082 FvH4_5g31890 FvH4_5g32251 FvH4_5g34112 FvH4_5g37184 FvH4_5g37993 FvH4_5g38271 FvH4_6g00153 FvH4_6g00640 FvH4_6g05921 FvH4_6g08591 FvH4_6g09511 FvH4_6g10331 FvH4_6g10401 FvH4_6g14161 FvH4_6g14171 FvH4_6g18481 FvH4_6g19721 FvH4_6g19980 FvH4_6g20104 FvH4_6g20112 FvH4_6g21261 FvH4_6g21651 FvH4_6g22051 FvH4_6g23141 FvH4_6g24822 FvH4_6g25082 FvH4_6g25391 FvH4_6g25560 FvH4_6g26350 FvH4_6g27031 FvH4_6g27810 FvH4_6g27971 FvH4_6g28331 FvH4_6g29391 FvH4_6g30781 FvH4_6g32221 FvH4_6g34680 FvH4_6g36181 FvH4_6g36551 FvH4_6g37491 FvH4_6g37663 FvH4_6g39590 FvH4_6g40582 FvH4_6g43843 FvH4_6g50551 FvH4_7g00240 FvH4_7g00731 FvH4_7g01031 FvH4_7g03301 FvH4_7g08180 FvH4_7g08180 FvH4_7g10631 FvH4_7g19710 FvH4_7g23892 FvH4_7g25280 FvH4_7g25551 FvH4_7g30121 FvH4_7g31931 FvH4_7g32672 FvH4_c21g00040 FvH4_c2g00053
prunus_persica	Prupe.1G448800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0322451 RchiOBHm_Chr5g0015171
rosa_laevigata	RLG00000003077 RLG00000018186 RLG00000030343
rosa_multiflora	Rmu_co8096726.1_g000001
rosa_roxburghii	Rroxscaffold_157G00438380 Rroxscaffold_1G00001730 Rroxscaffold_3G00236310
rosa_rugosa	Rorug02G0236500
rosa_samantha	Rh4BG247300 Rh6BG286200 Rh6CG287300 Rh7DG257500

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	202
Acc65I	GGTACC	1 cut(s)	366
AccB1I	GGYRCC	2 cut(s)	173, 366
AccB7I	CCANNNNNTGG	1 cut(s)	308
AccI	GTMKAC	1 cut(s)	450
AccII	CGCG	1 cut(s)	529
AciI	CCGC	2 cut(s)	107, 203
AcoI	YGGCCR	1 cut(s)	780
AcsI	RAATTY	1 cut(s)	1023
AcuI	CTGAAG	2 cut(s)	47, 968
AcyI	GRCGYC	2 cut(s)	174, 199
AfaI	GTAC	2 cut(s)	243, 368
AfiI	CCNNNNNNNGG	6 cut(s)	183, 308, 423, 479, 557, 685
AgsI	TTSAA	1 cut(s)	907
AjnI	CCWGG	3 cut(s)	472, 550, 678
AluBI	AGCT	6 cut(s)	214, 251, 799, 880, 913, 1010
AluI	AGCT	6 cut(s)	214, 251, 799, 880, 913, 1010
Alw26I	GTCTC	2 cut(s)	575, 845
Ama87I	CYCGRG	1 cut(s)	149
AoxI	GGCC	2 cut(s)	687, 780
ApeKI	GCWGC	7 cut(s)	83, 248, 719, 731, 734, 880, 913
ApoI	RAATTY	1 cut(s)	1023
AseI	ATTAAT	1 cut(s)	321
Asp700I	GAANNNNTTC	1 cut(s)	798
Asp718I	GGTACC	1 cut(s)	366
AspLEI	GCGC	4 cut(s)	162, 176, 629, 719
AspS9I	GGNCC	1 cut(s)	299
AsuHPI	GGTGA	2 cut(s)	411, 990
AvaI	CYCGRG	1 cut(s)	149
AvaII	GGWCC	1 cut(s)	299
BaeI	ACNNNNGTAYC	2 cut(s)	358, 391
BalI	TGGCCA	1 cut(s)	782
BanI	GGYRCC	2 cut(s)	173, 366
BbvCI	CCTCAGC	1 cut(s)	923
BbvI	GCAGC	7 cut(s)	70, 260, 706, 718, 721, 867, 900
BccI	CCATC	5 cut(s)	439, 481, 498, 506, 808
BciT130I	CCWGG	3 cut(s)	474, 552, 680
BclI	TGATCA	1 cut(s)	327
BcoDI	GTCTC	2 cut(s)	575, 845
BfaI	CTAG	1 cut(s)	1019
BfoI	RGCGCY	2 cut(s)	177, 720
BisI	GCNGC	7 cut(s)	84, 249, 720, 732, 735, 881, 914
BlsI	GCNGC	7 cut(s)	85, 250, 721, 733, 736, 882, 915
Bme1390I	CCNGG	3 cut(s)	474, 552, 680
Bme18I	GGWCC	1 cut(s)	299
BmeT110I	CYCGRG	1 cut(s)	149
BmgT120I	GGNCC	1 cut(s)	299
BmiI	GGNNCC	2 cut(s)	175, 368
BmrFI	CCNGG	3 cut(s)	474, 552, 680
BmsI	GCATC	1 cut(s)	122
Bpu10I	CCTNAGC	2 cut(s)	386, 923
Bsa29I	ATCGAT	2 cut(s)	25, 74
BsaHI	GRCGYC	2 cut(s)	174, 199
BsaJI	CCNNGG	3 cut(s)	397, 422, 690
Bsc4I	CCNNNNNNNGG	6 cut(s)	183, 308, 423, 479, 557, 685
Bse118I	RCCGGY	3 cut(s)	15, 109, 176
Bse1I	ACTGG	3 cut(s)	95, 458, 545
Bse3DI	GCAATG	2 cut(s)	313, 741
BseBI	CCWGG	3 cut(s)	474, 552, 680
BseCI	ATCGAT	2 cut(s)	25, 74
BseDI	CCNNGG	3 cut(s)	397, 422, 690
BseGI	GGATG	2 cut(s)	343, 517
BseLI	CCNNNNNNNGG	6 cut(s)	183, 308, 423, 479, 557, 685
BseMI	GCAATG	2 cut(s)	313, 741
BseMII	CTCAG	4 cut(s)	229, 914, 924, 984
BseNI	ACTGG	3 cut(s)	95, 458, 545
BseRI	GAGGAG	1 cut(s)	952
BseXI	GCAGC	7 cut(s)	70, 260, 706, 718, 721, 867, 900
BseYI	CCCAGC	1 cut(s)	637
Bsh1236I	CGCG	1 cut(s)	529
Bsh1285I	CGRYCG	1 cut(s)	181
BshFI	GGCC	2 cut(s)	689, 782
BshNI	GGYRCC	2 cut(s)	173, 366
BshVI	ATCGAT	2 cut(s)	25, 74
BsiEI	CGRYCG	1 cut(s)	181
BsiHKCI	CYCGRG	1 cut(s)	149
BsiSI	CCGG	3 cut(s)	16, 110, 177
BslFI	GGGAC	1 cut(s)	210
BslI	CCNNNNNNNGG	6 cut(s)	183, 308, 423, 479, 557, 685
BsmAI	GTCTC	2 cut(s)	575, 845
BsmFI	GGGAC	1 cut(s)	210
BsmI	GAATGC	1 cut(s)	883
BsnI	GGCC	2 cut(s)	689, 782
BsoBI	CYCGRG	1 cut(s)	149
Bsp143I	GATC	6 cut(s)	22, 71, 75, 124, 285, 327
Bsp68I	TCGCGA	1 cut(s)	529
BspACI	CCGC	2 cut(s)	107, 203
BspANI	GGCC	2 cut(s)	689, 782
BspCNI	CTCAG	4 cut(s)	228, 915, 925, 983
BspDI	ATCGAT	2 cut(s)	25, 74
BspFNI	CGCG	1 cut(s)	529
BspLI	GGNNCC	2 cut(s)	175, 368
BspT107I	GGYRCC	2 cut(s)	173, 366
BsrDI	GCAATG	2 cut(s)	313, 741
BsrFI	RCCGGY	3 cut(s)	15, 109, 176
BsrI	ACTGG	3 cut(s)	95, 458, 545
BssAI	RCCGGY	3 cut(s)	15, 109, 176
BssECI	CCNNGG	3 cut(s)	397, 422, 690
BssMI	GATC	6 cut(s)	22, 71, 75, 124, 285, 327
BssNI	GRCGYC	2 cut(s)	174, 199
BssT1I	CCWWGG	3 cut(s)	397, 422, 690
Bst2UI	CCWGG	3 cut(s)	474, 552, 680
Bst4CI	ACNGT	2 cut(s)	166, 751
Bst6I	CTCTTC	1 cut(s)	944
BstACI	GRCGYC	2 cut(s)	174, 199
BstC8I	GCNNGC	3 cut(s)	17, 111, 866
BstDEI	CTNAG	5 cut(s)	215, 386, 923, 933, 970
BstENI	CCTNNNNNAGG	1 cut(s)	421
BstF5I	GGATG	2 cut(s)	343, 517
BstFNI	CGCG	1 cut(s)	529
BstH2I	RGCGCY	2 cut(s)	177, 720
BstHHI	GCGC	4 cut(s)	162, 176, 629, 719
BstKTI	GATC	6 cut(s)	25, 74, 78, 127, 288, 330
BstMAI	GTCTC	2 cut(s)	575, 845
BstMBI	GATC	6 cut(s)	22, 71, 75, 124, 285, 327
BstMCI	CGRYCG	1 cut(s)	181
BstMWI	GCNNNNNNNGC	5 cut(s)	211, 728, 743, 796, 919
BstNI	CCWGG	3 cut(s)	474, 552, 680
BstNSI	RCATGY	2 cut(s)	868, 969
BstSCI	CCNGG	3 cut(s)	472, 550, 678
BstUI	CGCG	1 cut(s)	529
BstV1I	GCAGC	7 cut(s)	70, 260, 706, 718, 721, 867, 900
BstXI	CCANNNNNNTGG	3 cut(s)	404, 754, 814
Bsu15I	ATCGAT	2 cut(s)	25, 74
BsuRI	GGCC	2 cut(s)	689, 782
BsuTUI	ATCGAT	2 cut(s)	25, 74
BtgZI	GCGATG	2 cut(s)	145, 458
BtsCI	GGATG	2 cut(s)	343, 517
BtsIMutI	CAGTG	1 cut(s)	223
BtuMI	TCGCGA	1 cut(s)	529
Cac8I	GCNNGC	3 cut(s)	17, 111, 866
CfoI	GCGC	4 cut(s)	162, 176, 629, 719
Cfr10I	RCCGGY	3 cut(s)	15, 109, 176
Cfr13I	GGNCC	1 cut(s)	299
ClaI	ATCGAT	2 cut(s)	25, 74
Csp6I	GTAC	2 cut(s)	242, 367
CviAII	CATG	3 cut(s)	760, 865, 966
CviQI	GTAC	2 cut(s)	242, 367
DdeI	CTNAG	5 cut(s)	215, 386, 923, 933, 970
DinI	GGCGCC	1 cut(s)	175
DpnI	GATC	6 cut(s)	24, 73, 77, 126, 287, 329
DpnII	GATC	6 cut(s)	22, 71, 75, 124, 285, 327
DraI	TTTAAA	3 cut(s)	31, 379, 876
EaeI	YGGCCR	1 cut(s)	780
Eam1104I	CTCTTC	1 cut(s)	944
EarI	CTCTTC	1 cut(s)	944
EciI	GGCGGA	1 cut(s)	96
Eco130I	CCWWGG	3 cut(s)	397, 422, 690
Eco47I	GGWCC	1 cut(s)	299
Eco57I	CTGAAG	2 cut(s)	47, 968
Eco88I	CYCGRG	1 cut(s)	149
EcoNI	CCTNNNNNAGG	1 cut(s)	421
EcoRII	CCWGG	3 cut(s)	472, 550, 678
EcoT14I	CCWWGG	3 cut(s)	397, 422, 690
EgeI	GGCGCC	1 cut(s)	175
EheI	GGCGCC	1 cut(s)	175
ErhI	CCWWGG	3 cut(s)	397, 422, 690
FaeI	CATG	3 cut(s)	763, 868, 969
FalI	AAGNNNNNCTT	2 cut(s)	783, 815
FaqI	GGGAC	1 cut(s)	210
FatI	CATG	3 cut(s)	759, 864, 965
FbaI	TGATCA	1 cut(s)	327
FblI	GTMKAC	1 cut(s)	450
Fnu4HI	GCNGC	7 cut(s)	84, 249, 720, 732, 735, 881, 914
FokI	GGATG	2 cut(s)	350, 524
Fsp4HI	GCNGC	7 cut(s)	84, 249, 720, 732, 735, 881, 914
FspBI	CTAG	1 cut(s)	1019
GlaI	GCGC	4 cut(s)	161, 175, 628, 718
GluI	GCNGC	7 cut(s)	84, 249, 720, 732, 735, 881, 914
GsaI	CCCAGC	1 cut(s)	641
HaeII	RGCGCY	2 cut(s)	177, 720
HaeIII	GGCC	2 cut(s)	689, 782
HapII	CCGG	3 cut(s)	16, 110, 177
HhaI	GCGC	4 cut(s)	162, 176, 629, 719
Hin1I	GRCGYC	2 cut(s)	174, 199
Hin1II	CATG	3 cut(s)	763, 868, 969
Hin6I	GCGC	4 cut(s)	160, 174, 627, 717
HinP1I	GCGC	4 cut(s)	160, 174, 627, 717
HincII	GTYRAC	1 cut(s)	451
HindII	GTYRAC	1 cut(s)	451
HindIII	AAGCTT	1 cut(s)	797
HinfI	GANTC	8 cut(s)	103, 469, 531, 547, 827, 834, 853, 893
HpaII	CCGG	3 cut(s)	16, 110, 177
HphI	GGTGA	2 cut(s)	411, 990
Hpy166II	GTNNAC	3 cut(s)	223, 242, 451
Hpy188I	TCNGA	5 cut(s)	66, 468, 486, 511, 850
Hpy188III	TCNNGA	5 cut(s)	528, 535, 581, 831, 904
Hpy8I	GTNNAC	3 cut(s)	223, 242, 451
Hpy99I	CGWCG	2 cut(s)	170, 440
HpyAV	CCTTC	1 cut(s)	595
HpyCH4III	ACNGT	2 cut(s)	166, 751
HpyCH4IV	ACGT	1 cut(s)	199
HpyCH4V	TGCA	4 cut(s)	86, 768, 790, 883
HpyF10VI	GCNNNNNNNGC	5 cut(s)	211, 728, 743, 796, 919
HpyF3I	CTNAG	5 cut(s)	215, 386, 923, 933, 970
HpySE526I	ACGT	1 cut(s)	199
Hsp92I	GRCGYC	2 cut(s)	174, 199
Hsp92II	CATG	3 cut(s)	763, 868, 969
HspAI	GCGC	4 cut(s)	160, 174, 627, 717
KasI	GGCGCC	1 cut(s)	173
KpnI	GGTACC	1 cut(s)	370
KroI	GCCGGC	2 cut(s)	15, 109
KroNI	GCCGGC	2 cut(s)	17, 111
Ksp22I	TGATCA	1 cut(s)	327
Kzo9I	GATC	6 cut(s)	22, 71, 75, 124, 285, 327
LmnI	GCTCC	2 cut(s)	407, 593
Lsp1109I	GCAGC	7 cut(s)	70, 260, 706, 718, 721, 867, 900
LweI	GCATC	1 cut(s)	122
MaeI	CTAG	1 cut(s)	1019
MaeII	ACGT	1 cut(s)	199
MaeIII	GTNAC	2 cut(s)	841, 996
MalI	GATC	6 cut(s)	24, 73, 77, 126, 287, 329
MboI	GATC	6 cut(s)	22, 71, 75, 124, 285, 327
MboII	GAAGA	2 cut(s)	919, 961
MfeI	CAATTG	1 cut(s)	563
MlsI	TGGCCA	1 cut(s)	782
MluCI	AATT	4 cut(s)	322, 348, 563, 1023
MluNI	TGGCCA	1 cut(s)	782
Mly113I	GGCGCC	1 cut(s)	174
MlyI	GAGTC	2 cut(s)	112, 847
MmeI	TCCRAC	2 cut(s)	446, 489
Mox20I	TGGCCA	1 cut(s)	782
MroNI	GCCGGC	2 cut(s)	15, 109
MroXI	GAANNNNTTC	1 cut(s)	798
MscI	TGGCCA	1 cut(s)	782
MseI	TTAA	5 cut(s)	30, 210, 321, 378, 875
Msp20I	TGGCCA	1 cut(s)	782
MspI	CCGG	3 cut(s)	16, 110, 177
MspR9I	CCNGG	3 cut(s)	474, 552, 680
MunI	CAATTG	1 cut(s)	563
Mva1269I	GAATGC	1 cut(s)	883
MvaI	CCWGG	3 cut(s)	474, 552, 680
MvnI	CGCG	1 cut(s)	529
MwoI	GCNNNNNNNGC	5 cut(s)	211, 728, 743, 796, 919
NaeI	GCCGGC	2 cut(s)	17, 111
NarI	GGCGCC	1 cut(s)	174
NdeII	GATC	6 cut(s)	22, 71, 75, 124, 285, 327
NgoMIV	GCCGGC	2 cut(s)	15, 109
NlaIII	CATG	3 cut(s)	763, 868, 969
NlaIV	GGNNCC	2 cut(s)	175, 368
NmeAIII	GCCGAG	2 cut(s)	59, 693
NmuCI	GTSAC	1 cut(s)	996
NruI	TCGCGA	1 cut(s)	529
NspI	RCATGY	2 cut(s)	868, 969
PaeI	GCATGC	1 cut(s)	868
PcsI	WCGNNNNNNNCGW	1 cut(s)	533
PctI	GAATGC	1 cut(s)	883
PdiI	GCCGGC	2 cut(s)	17, 111
PdmI	GAANNNNTTC	1 cut(s)	798
PfeI	GAWTC	6 cut(s)	469, 531, 547, 827, 834, 893
PflMI	CCANNNNNTGG	1 cut(s)	308
PkrI	GCNGC	7 cut(s)	85, 250, 721, 733, 736, 882, 915
PleI	GAGTC	2 cut(s)	111, 847
PluTI	GGCGCC	1 cut(s)	177
PpsI	GAGTC	2 cut(s)	111, 847
PshBI	ATTAAT	1 cut(s)	321
Psp6I	CCWGG	3 cut(s)	472, 550, 678
PspFI	CCCAGC	1 cut(s)	637
PspGI	CCWGG	3 cut(s)	472, 550, 678
PspN4I	GGNNCC	2 cut(s)	175, 368
PspPI	GGNCC	1 cut(s)	299
RruI	TCGCGA	1 cut(s)	529
RsaI	GTAC	2 cut(s)	243, 368
RsaNI	GTAC	2 cut(s)	242, 367
SalI	GTCGAC	1 cut(s)	449
SaqAI	TTAA	5 cut(s)	30, 210, 321, 378, 875
SatI	GCNGC	7 cut(s)	84, 249, 720, 732, 735, 881, 914
Sau3AI	GATC	6 cut(s)	22, 71, 75, 124, 285, 327
Sau96I	GGNCC	1 cut(s)	299
SchI	GAGTC	2 cut(s)	112, 847
ScrFI	CCNGG	3 cut(s)	474, 552, 680
SfaNI	GCATC	1 cut(s)	122
SfoI	GGCGCC	1 cut(s)	175
SinI	GGWCC	1 cut(s)	299
SphI	GCATGC	1 cut(s)	868
Sse9I	AATT	4 cut(s)	322, 348, 563, 1023
SsiI	CCGC	2 cut(s)	107, 203
SspDI	GGCGCC	1 cut(s)	173
SspMI	CTAG	1 cut(s)	1019
StyD4I	CCNGG	3 cut(s)	472, 550, 678
StyI	CCWWGG	3 cut(s)	397, 422, 690
TaaI	ACNGT	2 cut(s)	166, 751
TaiI	ACGT	1 cut(s)	202
TaqI	TCGA	6 cut(s)	25, 74, 284, 450, 502, 580
TasI	AATT	4 cut(s)	322, 348, 563, 1023
TfiI	GAWTC	6 cut(s)	469, 531, 547, 827, 834, 893
Tru1I	TTAA	5 cut(s)	30, 210, 321, 378, 875
Tru9I	TTAA	5 cut(s)	30, 210, 321, 378, 875
TscAI	CASTG	1 cut(s)	223
TseFI	GTSAC	1 cut(s)	996
TseI	GCWGC	7 cut(s)	83, 248, 719, 731, 734, 880, 913
Tsp45I	GTSAC	1 cut(s)	996
TspDTI	ATGAA	2 cut(s)	17, 791
TspRI	CASTG	1 cut(s)	223
Van91I	CCANNNNNTGG	1 cut(s)	308
VpaK11BI	GGWCC	1 cut(s)	299
VspI	ATTAAT	1 cut(s)	321
XagI	CCTNNNNNAGG	1 cut(s)	421
XapI	RAATTY	1 cut(s)	1023
XceI	RCATGY	2 cut(s)	868, 969
XmiI	GTMKAC	1 cut(s)	450
XmnI	GAANNNNTTC	1 cut(s)	798
XspI	CTAG	1 cut(s)	1019
ZraI	GACGTC	1 cut(s)	200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.