RchiOBHm_Chr1g0322451
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000118
Physical Location & Seq
Forward (+)
9792851 .. 9795605
2755 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55245

Sequence Viewer

Length: 1854 bp
ATGGAGCTTTCATCCAAAGTGGACAGTTTGTCTCAAGAATCTGAAGGTTATAAGAAGATGTTCAAAGAGGTGCTTGAAAAATTGAATTCCTTGGAACATGGTTTTCAATCAATGTCTGCTTTGGTTAAAGAGAAGTCAAAAGATGGTGAAAGAAGCATAGGCCAGAATTCATTTTCAGATTCTAGGCACGAAGACTCAAGACAATCTGGTTCAGCAAAGGGTGTGAAACTGGATGTTACTGATTTTAATGGAGACAGCAATCCTAAGGTGTTCCTTGATTGGCTACATAGTTTGGAAAGTTACTTCAAATGGCATCAGTTGGCAGAGGAGCGAAAAATCTCTTTTGCAGAAGCTAAATTGAAGGGGACAACTAGAGTTTGGTGGGAAAAATACCAACAAACTCATTTTGCGGTGACTAGAACTTGGGAAGACATAAAGATGACTTTGACACGTTTCTTTGTGCCACCTAATTACAAGCAACGGGTACACTTGCAATTCGTAGAACTGGTGCAAGGAAGCCTATCAGTGGAAGAGTATACAAATAAGTTCCTTAGTTTGGCTGCAAAATCAGATTTTCCATGGAATGAAGACATCATGATATCGATGTACCGCAAGGGCTTGAATCCTCATATTTCTTCGGGATTAGCAGCAAGTCGAATTTATACTATGAATGATGCTGTCCAAATTGCATACCAAATGGAGGAAGAGTATAAGAAGAAATCGTCCATGTCAATTTCAAACAAAGGGAAGACACTTGACAAATCTTCTGGAGGTTTCACATCTACAACTAGCGATTCAGATGAGAAAACTCATGGTGGTTCCTCATCTTCCAACCAGTTAGTGAGTTCTACTCTTAAGAGTGCACAAAAGGCTGCTGGCTTTGGACACTTGATGGGACAATGCCCAAATCGGTTAGTTGCTTTTGCAGATAAGGAAGATCCTATTGCATCCGCCAACCCTGAACAAAAGGCAAATGAAGTTGTTGAATTGCAAGCTGAGCAAGAGATGGAGTTGTGTACCCTAGTTATAGATGGAGGGAGTTGCTCTAATGTCATTTTTGAGGAAGCTGTTCTCAAGCTTGGGTTGCCTACCGAACCACATCCAAGTCCTTACAAGGTGGCATGGGTAAATAACACAAATCTCAAGGTCAATGATCGTTGTTTGGTGACATACACTATTGGGAAATTGGTTGACAGCGTGACCTGTGATGTGCTGCCCATGAAAGTGTGTCATATTCTTCTGGGTCGACCATGGTTATATGATAAGAAGGTACAGCACTGTGGCTATAACAACACATATTCCTTCAAAGATGGAAGTTCTGATTTCAAATTCGTACCAACTAAAGGTTTGTCAACCATAAAGCTCAAGAAGACAGCTGGCACGTTCCTCCTTAAACAGACTGAAAGTGATGATTCTATACTTGGTCCAATTCCAAACTCGACTGAGTCGAGTTCTTTTCAGAGGGGGAGAATTAATGCAGCAGCAATGACTTGGTTAGAAAAGAATTATCCGCTTTGGAAACCTAAGATTAAGCCCACCCCATTTTGGTCCAAAGGAAAGTCTCCATGGCTTGTGCTTTGGTTTCTCTCTCCCCTTACCTTCCTCGCTCTATTTCTCCCTTCTACAGCTAAGAACCCTCTATTTCTTCTAAAATCATTCTGCTTTCTTATTCTCTCAACTCTCCCAAACCACCCAAATCATACTCTCACTTACTGTTGCTCTCTGCTGCATCAAGAAGTTTCCCTCATAGATTTAAGAGACGGTATTTCTGAATACACTGCTGCAACTACTCTCATGAGTACAGACCCTTGTGCTATTGATGCCTTTCTAGTTTCTACCCACTTCATTAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 Retrotrans_gag zf-CCHC

Protein Analysis

617

Amino Acids

69.28

Weight (kDa)

7.89

Isoelectric Point (pI)

36.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ty3_capsid PF19259 79 - 250 3.3e-16 Ty3 transposon capsid-like protein
Retrotrans_gag PF03732 115 - 209 1.5e-14 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000118)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01361 FvH4_1g07161 FvH4_1g07431 FvH4_1g07821 FvH4_1g08223 FvH4_1g10041 FvH4_1g12132 FvH4_1g15053 FvH4_1g18161 FvH4_1g18400 FvH4_1g18931 FvH4_1g19242 FvH4_1g19461 FvH4_1g20550 FvH4_1g21381 FvH4_1g21542 FvH4_1g22102 FvH4_1g23991 FvH4_1g24542 FvH4_1g24951 FvH4_1g24960 FvH4_1g25272 FvH4_1g25552 FvH4_1g25771 FvH4_1g28771 FvH4_1g29201 FvH4_1g29611 FvH4_2g01181 FvH4_2g02491 FvH4_2g04621 FvH4_2g04631 FvH4_2g07460 FvH4_2g08540 FvH4_2g08550 FvH4_2g09292 FvH4_2g10501 FvH4_2g12101 FvH4_2g12220 FvH4_2g12551 FvH4_2g14071 FvH4_2g14241 FvH4_2g15041 FvH4_2g15311 FvH4_2g18971 FvH4_2g19220 FvH4_2g19260 FvH4_2g19611 FvH4_2g19652 FvH4_2g20211 FvH4_2g20231 FvH4_2g21541 FvH4_2g22380 FvH4_2g27712 FvH4_2g28171 FvH4_2g29879 FvH4_2g32391 FvH4_3g02171 FvH4_3g05531 FvH4_3g09750 FvH4_3g10310 FvH4_3g10460 FvH4_3g13172 FvH4_3g15232 FvH4_3g18481 FvH4_3g18621 FvH4_3g20504 FvH4_3g20812 FvH4_3g22320 FvH4_3g22930 FvH4_3g22940 FvH4_3g23752 FvH4_3g24791 FvH4_3g26411 FvH4_3g26432 FvH4_3g27201 FvH4_3g27862 FvH4_3g28871 FvH4_3g28954 FvH4_3g29131 FvH4_3g29832 FvH4_3g29922 FvH4_3g30190 FvH4_3g32231 FvH4_3g32250 FvH4_3g33460 FvH4_3g34670 FvH4_3g36982 FvH4_3g37001 FvH4_3g38252 FvH4_3g38772 FvH4_3g40141 FvH4_3g40181 FvH4_3g42521 FvH4_4g00090 FvH4_4g00290 FvH4_4g00301 FvH4_4g00530 FvH4_4g00823 FvH4_4g02300 FvH4_4g02450 FvH4_4g03360 FvH4_4g04481 FvH4_4g04761 FvH4_4g06301 FvH4_4g06630 FvH4_4g08312 FvH4_4g08552 FvH4_4g10053 FvH4_4g11971 FvH4_4g13211 FvH4_4g13511 FvH4_4g15351 FvH4_4g16360 FvH4_4g16601 FvH4_4g18462 FvH4_4g22911 FvH4_4g23221 FvH4_4g24301 FvH4_4g24721 FvH4_4g27905 FvH4_4g28971 FvH4_4g29540 FvH4_4g30720 FvH4_4g31521 FvH4_4g33371 FvH4_4g34111 FvH4_4g35740 FvH4_5g00131 FvH4_5g02530 FvH4_5g02550 FvH4_5g02560 FvH4_5g02580 FvH4_5g03783 FvH4_5g05681 FvH4_5g05681 FvH4_5g09371 FvH4_5g09381 FvH4_5g14611 FvH4_5g15341 FvH4_5g19801 FvH4_5g20110 FvH4_5g20911 FvH4_5g22230 FvH4_5g25751 FvH4_5g26070 FvH4_5g26471 FvH4_5g27072 FvH4_5g27471 FvH4_5g27471 FvH4_5g27998 FvH4_5g28291 FvH4_5g30951 FvH4_5g31082 FvH4_5g31890 FvH4_5g32251 FvH4_5g34112 FvH4_5g37184 FvH4_5g37993 FvH4_5g38271 FvH4_6g00153 FvH4_6g00640 FvH4_6g05921 FvH4_6g08591 FvH4_6g09511 FvH4_6g10331 FvH4_6g10401 FvH4_6g14161 FvH4_6g14171 FvH4_6g18481 FvH4_6g19721 FvH4_6g19980 FvH4_6g20104 FvH4_6g20112 FvH4_6g21261 FvH4_6g21651 FvH4_6g22051 FvH4_6g23141 FvH4_6g24822 FvH4_6g25082 FvH4_6g25391 FvH4_6g25560 FvH4_6g26350 FvH4_6g27031 FvH4_6g27810 FvH4_6g27971 FvH4_6g28331 FvH4_6g29391 FvH4_6g30781 FvH4_6g32221 FvH4_6g34680 FvH4_6g36181 FvH4_6g36551 FvH4_6g37491 FvH4_6g37663 FvH4_6g39590 FvH4_6g40582 FvH4_6g43843 FvH4_6g50551 FvH4_7g00240 FvH4_7g00731 FvH4_7g01031 FvH4_7g03301 FvH4_7g08180 FvH4_7g08180 FvH4_7g10631 FvH4_7g19710 FvH4_7g23892 FvH4_7g25280 FvH4_7g25551 FvH4_7g30121 FvH4_7g31931 FvH4_7g32672 FvH4_c21g00040 FvH4_c2g00053
prunus_persica Prupe.1G448800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322451 RchiOBHm_Chr5g0015171
rosa_laevigata RLG00000003077 RLG00000018186 RLG00000030343
rosa_multiflora Rmu_co8096726.1_g000001
rosa_roxburghii Rroxscaffold_157G00438380 Rroxscaffold_1G00001730 Rroxscaffold_3G00236310
rosa_rugosa Rorug02G0236500
rosa_samantha Rh4BG247300 Rh6BG286200 Rh6CG287300 Rh7DG257500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 51
AccI GTMKAC 2 cut(s) 536, 1246
AciI CCGC 4 cut(s) 410, 610, 951, 1511
AclWI GGATC 1 cut(s) 932
AcsI RAATTY 4 cut(s) 85, 166, 657, 1328
AcuI CTGAAG 1 cut(s) 63
AfaI GTAC 6 cut(s) 486, 608, 1018, 1272, 1335, 1801
AfiI CCNNNNNNNGG 5 cut(s) 526, 556, 700, 1343, 1545
AflII CTTAAG 1 cut(s) 854
AflIII ACRYGT 1 cut(s) 449
AhdI GACNNNNNGTC 1 cut(s) 28
AluBI AGCT 8 cut(s) 7, 353, 995, 1067, 1078, 1363, 1376, 1628
AluI AGCT 8 cut(s) 7, 353, 995, 1067, 1078, 1363, 1376, 1628
Alw21I GWGCWC 1 cut(s) 865
Alw26I GTCTC 4 cut(s) 36, 246, 1566, 1752
Alw44I GTGCAC 1 cut(s) 861
AlwI GGATC 1 cut(s) 932
AoxI GGCC 1 cut(s) 160
ApaLI GTGCAC 1 cut(s) 861
ApeKI GCWGC 8 cut(s) 560, 647, 872, 1213, 1478, 1481, 1726, 1781
ApoI RAATTY 4 cut(s) 85, 166, 657, 1328
AseI ATTAAT 1 cut(s) 1473
Asp700I GAANNNNTTC 2 cut(s) 59, 1068
AspS9I GGNCC 2 cut(s) 1424, 1548
AsuHPI GGTGA 3 cut(s) 158, 424, 1177
AvaII GGWCC 2 cut(s) 1424, 1548
AxyI CCTNAGG 1 cut(s) 264
BaeGI GKGCMC 1 cut(s) 865
BbsI GAAGAC 5 cut(s) 198, 435, 594, 755, 1376
Bbv12I GWGCWC 1 cut(s) 865
BbvI GCAGC 8 cut(s) 547, 659, 859, 1200, 1490, 1493, 1713, 1768
BccI CCATC 5 cut(s) 137, 886, 1000, 1025, 1304
BcoDI GTCTC 4 cut(s) 36, 246, 1566, 1752
BfaI CTAG 6 cut(s) 183, 372, 417, 789, 1022, 1829
BfmI CTRYAG 1 cut(s) 1623
BfrI CTTAAG 1 cut(s) 854
BisI GCNGC 8 cut(s) 561, 648, 873, 1214, 1479, 1482, 1727, 1782
BlpI GCTNAGC 1 cut(s) 996
BlsI GCNGC 8 cut(s) 562, 649, 874, 1215, 1480, 1483, 1728, 1783
Bme18I GGWCC 2 cut(s) 1424, 1548
BmeRI GACNNNNNGTC 1 cut(s) 28
BmgT120I GGNCC 2 cut(s) 1424, 1548
BmiI GGNNCC 1 cut(s) 820
BmsI GCATC 5 cut(s) 322, 664, 956, 1738, 1810
BpiI GAAGAC 5 cut(s) 198, 435, 594, 755, 1376
BplI GAGNNNNNCTC 2 cut(s) 835, 867
BpmI CTGGAG 1 cut(s) 789
Bpu1102I GCTNAGC 1 cut(s) 996
BpuEI CTTGAG 5 cut(s) 18, 181, 1058, 1127, 1349
Bsa29I ATCGAT 1 cut(s) 602
BsaJI CCNNGG 4 cut(s) 90, 578, 1250, 1565
BsaXI ACNNNNNCTCC 2 cut(s) 692, 722
Bsc4I CCNNNNNNNGG 5 cut(s) 526, 556, 700, 1343, 1545
Bse1I ACTGG 3 cut(s) 234, 510, 835
Bse21I CCTNAGG 1 cut(s) 264
Bse3DI GCAATG 1 cut(s) 1491
BseCI ATCGAT 1 cut(s) 602
BseDI CCNNGG 4 cut(s) 90, 578, 1250, 1565
BseGI GGATG 4 cut(s) 11, 238, 947, 1099
BseLI CCNNNNNNNGG 5 cut(s) 526, 556, 700, 1343, 1545
BseMI GCAATG 1 cut(s) 1491
BseMII CTCAG 2 cut(s) 987, 1434
BseNI ACTGG 3 cut(s) 234, 510, 835
BseRI GAGGAG 1 cut(s) 341
BseSI GKGCMC 1 cut(s) 865
BseXI GCAGC 8 cut(s) 547, 659, 859, 1200, 1490, 1493, 1713, 1768
BshFI GGCC 1 cut(s) 162
BshVI ATCGAT 1 cut(s) 602
BsiHKAI GWGCWC 1 cut(s) 865
BslFI GGGAC 2 cut(s) 379, 909
BslI CCNNNNNNNGG 5 cut(s) 526, 556, 700, 1343, 1545
BsmAI GTCTC 4 cut(s) 36, 246, 1566, 1752
BsmBI CGTCTC 1 cut(s) 1752
BsmFI GGGAC 2 cut(s) 379, 909
BsnI GGCC 1 cut(s) 162
Bsp1286I GDGCHC 1 cut(s) 865
Bsp143I GATC 2 cut(s) 937, 1153
Bsp1720I GCTNAGC 1 cut(s) 996
Bsp19I CCATGG 3 cut(s) 578, 1250, 1565
BspACI CCGC 4 cut(s) 410, 610, 951, 1511
BspANI GGCC 1 cut(s) 162
BspCNI CTCAG 2 cut(s) 988, 1435
BspDI ATCGAT 1 cut(s) 602
BspHI TCATGA 2 cut(s) 594, 1794
BspLI GGNNCC 1 cut(s) 820
BspPI GGATC 1 cut(s) 932
BspTI CTTAAG 1 cut(s) 854
BsrDI GCAATG 1 cut(s) 1491
BsrI ACTGG 3 cut(s) 234, 510, 835
BssECI CCNNGG 4 cut(s) 90, 578, 1250, 1565
BssMI GATC 2 cut(s) 937, 1153
BssNAI GTATAC 1 cut(s) 537
BssT1I CCWWGG 4 cut(s) 90, 578, 1250, 1565
Bst1107I GTATAC 1 cut(s) 537
Bst4CI ACNGT 4 cut(s) 26, 1280, 1715, 1763
Bst6I CTCTTC 2 cut(s) 525, 699
BstAFI CTTAAG 1 cut(s) 854
BstC8I GCNNGC 3 cut(s) 877, 993, 1378
BstDEI CTNAG 6 cut(s) 264, 551, 996, 1443, 1524, 1629
BstDSI CCRYGG 3 cut(s) 578, 1250, 1565
BstF5I GGATG 4 cut(s) 11, 238, 947, 1099
BstKTI GATC 2 cut(s) 940, 1156
BstMAI GTCTC 4 cut(s) 36, 246, 1566, 1752
BstMBI GATC 2 cut(s) 937, 1153
BstMWI GCNNNNNNNGC 4 cut(s) 869, 997, 1084, 1820
BstSFI CTRYAG 1 cut(s) 1623
BstSLI GKGCMC 1 cut(s) 865
BstV1I GCAGC 8 cut(s) 547, 659, 859, 1200, 1490, 1493, 1713, 1768
BstV2I GAAGAC 5 cut(s) 198, 435, 594, 755, 1376
BstX2I RGATCY 1 cut(s) 937
BstYI RGATCY 1 cut(s) 937
BstZ17I GTATAC 1 cut(s) 537
Bsu15I ATCGAT 1 cut(s) 602
Bsu36I CCTNAGG 1 cut(s) 264
BsuRI GGCC 1 cut(s) 162
BsuTUI ATCGAT 1 cut(s) 602
BtgI CCRYGG 3 cut(s) 578, 1250, 1565
BtsCI GGATG 4 cut(s) 11, 238, 947, 1099
BtsI GCAGTG 1 cut(s) 1776
BtsIMutI CAGTG 3 cut(s) 531, 1276, 1776
Cac8I GCNNGC 3 cut(s) 877, 993, 1378
CciI TCATGA 2 cut(s) 594, 1794
Cfr13I GGNCC 2 cut(s) 1424, 1548
ClaI ATCGAT 1 cut(s) 602
Csp6I GTAC 6 cut(s) 485, 607, 1017, 1271, 1334, 1800
CviQI GTAC 6 cut(s) 485, 607, 1017, 1271, 1334, 1800
DdeI CTNAG 6 cut(s) 264, 551, 996, 1443, 1524, 1629
DpnI GATC 2 cut(s) 939, 1155
DpnII GATC 2 cut(s) 937, 1153
DriI GACNNNNNGTC 1 cut(s) 28
Eam1104I CTCTTC 2 cut(s) 525, 699
Eam1105I GACNNNNNGTC 1 cut(s) 28
EarI CTCTTC 2 cut(s) 525, 699
EciI GGCGGA 1 cut(s) 940
Eco130I CCWWGG 4 cut(s) 90, 578, 1250, 1565
Eco32I GATATC 1 cut(s) 600
Eco47I GGWCC 2 cut(s) 1424, 1548
Eco57I CTGAAG 1 cut(s) 63
Eco81I CCTNAGG 1 cut(s) 264
EcoRI GAATTC 2 cut(s) 85, 166
EcoRV GATATC 1 cut(s) 600
EcoT14I CCWWGG 4 cut(s) 90, 578, 1250, 1565
ErhI CCWWGG 4 cut(s) 90, 578, 1250, 1565
Esp3I CGTCTC 1 cut(s) 1752
FalI AAGNNNNNCTT 2 cut(s) 57, 89
FaqI GGGAC 2 cut(s) 379, 909
FblI GTMKAC 2 cut(s) 536, 1246
Fnu4HI GCNGC 8 cut(s) 561, 648, 873, 1214, 1479, 1482, 1727, 1782
FokI GGATG 3 cut(s) 245, 934, 1086
Fsp4HI GCNGC 8 cut(s) 561, 648, 873, 1214, 1479, 1482, 1727, 1782
FspBI CTAG 6 cut(s) 183, 372, 417, 789, 1022, 1829
GluI GCNGC 8 cut(s) 561, 648, 873, 1214, 1479, 1482, 1727, 1782
GsuI CTGGAG 1 cut(s) 789
HaeIII GGCC 1 cut(s) 162
HincII GTYRAC 3 cut(s) 1192, 1247, 1353
HindII GTYRAC 3 cut(s) 1192, 1247, 1353
HindIII AAGCTT 1 cut(s) 1076
HinfI GANTC 7 cut(s) 38, 179, 194, 622, 794, 1412, 1445
HphI GGTGA 3 cut(s) 158, 424, 1177
Hpy166II GTNNAC 8 cut(s) 22, 487, 537, 863, 1017, 1192, 1247, 1353
Hpy188I TCNGA 7 cut(s) 43, 178, 571, 799, 1321, 1461, 1771
Hpy188III TCNNGA 8 cut(s) 35, 198, 595, 639, 768, 1366, 1733, 1795
Hpy8I GTNNAC 8 cut(s) 22, 487, 537, 863, 1017, 1192, 1247, 1353
HpyAV CCTTC 6 cut(s) 38, 355, 1261, 1312, 1609, 1629
HpyCH4III ACNGT 4 cut(s) 26, 1280, 1715, 1763
HpyCH4IV ACGT 2 cut(s) 451, 1382
HpyF10VI GCNNNNNNNGC 4 cut(s) 869, 997, 1084, 1820
HpyF3I CTNAG 6 cut(s) 264, 551, 996, 1443, 1524, 1629
HpySE526I ACGT 2 cut(s) 451, 1382
Kzo9I GATC 2 cut(s) 937, 1153
LmnI GCTCC 2 cut(s) 4, 328
Lsp1109I GCAGC 8 cut(s) 547, 659, 859, 1200, 1490, 1493, 1713, 1768
LweI GCATC 5 cut(s) 322, 664, 956, 1738, 1810
MaeI CTAG 6 cut(s) 183, 372, 417, 789, 1022, 1829
MaeII ACGT 2 cut(s) 451, 1382
MaeIII GTNAC 5 cut(s) 235, 299, 412, 1165, 1198
MalI GATC 2 cut(s) 939, 1155
MboI GATC 2 cut(s) 937, 1153
MflI RGATCY 1 cut(s) 937
MhlI GDGCHC 1 cut(s) 865
MlyI GAGTC 2 cut(s) 188, 1454
MmeI TCCRAC 1 cut(s) 855
MroXI GAANNNNTTC 2 cut(s) 59, 1068
MseI TTAA 7 cut(s) 126, 246, 855, 1392, 1473, 1530, 1754
MslI CAYNNNNRTG 2 cut(s) 437, 1223
MspA1I CMGCKG 1 cut(s) 1376
MspCI CTTAAG 1 cut(s) 854
MwoI GCNNNNNNNGC 4 cut(s) 869, 997, 1084, 1820
NcoI CCATGG 3 cut(s) 578, 1250, 1565
NdeII GATC 2 cut(s) 937, 1153
NlaIV GGNNCC 1 cut(s) 820
NmuCI GTSAC 3 cut(s) 412, 1165, 1198
PagI TCATGA 2 cut(s) 594, 1794
PcsI WCGNNNNNNNCGW 1 cut(s) 1445
PdmI GAANNNNTTC 2 cut(s) 59, 1068
PfeI GAWTC 5 cut(s) 38, 179, 622, 794, 1412
PflFI GACNNNGTC 1 cut(s) 1444
PkrI GCNGC 8 cut(s) 562, 649, 874, 1215, 1480, 1483, 1728, 1783
PleI GAGTC 2 cut(s) 188, 1453
PpsI GAGTC 2 cut(s) 188, 1453
PshBI ATTAAT 1 cut(s) 1473
PsiI TTATAA 1 cut(s) 51
PspN4I GGNNCC 1 cut(s) 820
PspPI GGNCC 2 cut(s) 1424, 1548
PsuI RGATCY 1 cut(s) 937
PsyI GACNNNGTC 1 cut(s) 1444
PvuII CAGCTG 1 cut(s) 1376
RsaI GTAC 6 cut(s) 486, 608, 1018, 1272, 1335, 1801
RsaNI GTAC 6 cut(s) 485, 607, 1017, 1271, 1334, 1800
RseI CAYNNNNRTG 2 cut(s) 437, 1223
SalI GTCGAC 1 cut(s) 1245
SaqAI TTAA 7 cut(s) 126, 246, 855, 1392, 1473, 1530, 1754
SatI GCNGC 8 cut(s) 561, 648, 873, 1214, 1479, 1482, 1727, 1782
Sau3AI GATC 2 cut(s) 937, 1153
Sau96I GGNCC 2 cut(s) 1424, 1548
SchI GAGTC 2 cut(s) 188, 1454
SduI GDGCHC 1 cut(s) 865
SfaNI GCATC 5 cut(s) 322, 664, 956, 1738, 1810
SfcI CTRYAG 1 cut(s) 1623
SinI GGWCC 2 cut(s) 1424, 1548
SmiMI CAYNNNNRTG 2 cut(s) 437, 1223
SmlI CTYRAG 6 cut(s) 33, 196, 854, 1073, 1142, 1364
SmoI CTYRAG 6 cut(s) 33, 196, 854, 1073, 1142, 1364
SsiI CCGC 4 cut(s) 410, 610, 951, 1511
SspMI CTAG 6 cut(s) 183, 372, 417, 789, 1022, 1829
StyI CCWWGG 4 cut(s) 90, 578, 1250, 1565
TaaI ACNGT 4 cut(s) 26, 1280, 1715, 1763
TaiI ACGT 2 cut(s) 454, 1385
TaqI TCGA 5 cut(s) 602, 655, 1246, 1439, 1448
TatI WGTACW 1 cut(s) 1799
TfiI GAWTC 5 cut(s) 38, 179, 622, 794, 1412
Tru1I TTAA 7 cut(s) 126, 246, 855, 1392, 1473, 1530, 1754
Tru9I TTAA 7 cut(s) 126, 246, 855, 1392, 1473, 1530, 1754
TscAI CASTG 3 cut(s) 531, 1283, 1783
TseFI GTSAC 3 cut(s) 412, 1165, 1198
TseI GCWGC 8 cut(s) 560, 647, 872, 1213, 1478, 1481, 1726, 1781
Tsp45I GTSAC 3 cut(s) 412, 1165, 1198
TspDTI ATGAA 6 cut(s) 159, 600, 683, 990, 1235, 1834
TspRI CASTG 3 cut(s) 531, 1283, 1783
Tth111I GACNNNGTC 1 cut(s) 1444
Vha464I CTTAAG 1 cut(s) 854
VneI GTGCAC 1 cut(s) 861
VpaK11BI GGWCC 2 cut(s) 1424, 1548
VspI ATTAAT 1 cut(s) 1473
XapI RAATTY 4 cut(s) 85, 166, 657, 1328
XmiI GTMKAC 2 cut(s) 536, 1246
XmnI GAANNNNTTC 2 cut(s) 59, 1068
XspI CTAG 6 cut(s) 183, 372, 417, 789, 1022, 1829
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.