FvH4_4g22911
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000118
Physical Location & Seq
Forward (+)
25566499 .. 25567662
1164 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g22911.t1

Sequence Viewer

Length: 615 bp
ATGTCCTCACCGCCTTACGGTGCGGATTTCCCTCCGTTCACCACCGTACGGCGCCGGCGAGGGTGCGCCTCCACCCCAGCGGACTCCAGCAGCTTTCCCGACCTCTTTCCATCCCCGGCGAGTCCGCCGAATTCCAGTTTTCCGGCCAGATTGACTTTGTTTGAAGTTTTGGGTGATTTGGCAGGAAAACTGGAATTCGGCGGACTCGCCGGAGATGGAAAGAGGTCGGGGAAGCTGCTGGAGTCCGCTAGGGTGGAGGCGCACCCTCGCCGGTGCTCGCCGGTGCCGTACGATGCAAAGCGATTAATTGGCAGGAGATTTAGTGATGCCTCAGTTCAAAGTGATGTTAAGTTATGGCCATTCAAGGTCATTGAAGGGGAAGATAATAAGCCCAAGATATTGATTAAACACAATGGCCAGAAGAAAGAATTTGCTCCTGAAGAAATCTCATCCATGATTCTCGGAAAGATGCGAGAGATAGCCGAAGCCTACCTTGGATCAAAAGTTAAGAATGCCGTTATCACTGTCCCGGCTTACTTCAATGACTCGCAACGTCAGGCTACAAAGAATGCTGGTCTTATTGCAGGGTTAAATGTGATGCGCGCGTATTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

205

Amino Acids

22.31

Weight (kDa)

9.63

Isoelectric Point (pI)

73.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 97 - 201 5.1e-41 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000118)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01361 FvH4_1g07161 FvH4_1g07431 FvH4_1g07821 FvH4_1g08223 FvH4_1g10041 FvH4_1g12132 FvH4_1g15053 FvH4_1g18161 FvH4_1g18400 FvH4_1g18931 FvH4_1g19242 FvH4_1g19461 FvH4_1g20550 FvH4_1g21381 FvH4_1g21542 FvH4_1g22102 FvH4_1g23991 FvH4_1g24542 FvH4_1g24951 FvH4_1g24960 FvH4_1g25272 FvH4_1g25552 FvH4_1g25771 FvH4_1g28771 FvH4_1g29201 FvH4_1g29611 FvH4_2g01181 FvH4_2g02491 FvH4_2g04621 FvH4_2g04631 FvH4_2g07460 FvH4_2g08540 FvH4_2g08550 FvH4_2g09292 FvH4_2g10501 FvH4_2g12101 FvH4_2g12220 FvH4_2g12551 FvH4_2g14071 FvH4_2g14241 FvH4_2g15041 FvH4_2g15311 FvH4_2g18971 FvH4_2g19220 FvH4_2g19260 FvH4_2g19611 FvH4_2g19652 FvH4_2g20211 FvH4_2g20231 FvH4_2g21541 FvH4_2g22380 FvH4_2g27712 FvH4_2g28171 FvH4_2g29879 FvH4_2g32391 FvH4_3g02171 FvH4_3g05531 FvH4_3g09750 FvH4_3g10310 FvH4_3g10460 FvH4_3g13172 FvH4_3g15232 FvH4_3g18481 FvH4_3g18621 FvH4_3g20504 FvH4_3g20812 FvH4_3g22320 FvH4_3g22930 FvH4_3g22940 FvH4_3g23752 FvH4_3g24791 FvH4_3g26411 FvH4_3g26432 FvH4_3g27201 FvH4_3g27862 FvH4_3g28871 FvH4_3g28954 FvH4_3g29131 FvH4_3g29832 FvH4_3g29922 FvH4_3g30190 FvH4_3g32231 FvH4_3g32250 FvH4_3g33460 FvH4_3g34670 FvH4_3g36982 FvH4_3g37001 FvH4_3g38252 FvH4_3g38772 FvH4_3g40141 FvH4_3g40181 FvH4_3g42521 FvH4_4g00090 FvH4_4g00290 FvH4_4g00301 FvH4_4g00530 FvH4_4g00823 FvH4_4g02300 FvH4_4g02450 FvH4_4g03360 FvH4_4g04481 FvH4_4g04761 FvH4_4g06301 FvH4_4g06630 FvH4_4g08312 FvH4_4g08552 FvH4_4g10053 FvH4_4g11971 FvH4_4g13211 FvH4_4g13511 FvH4_4g15351 FvH4_4g16360 FvH4_4g16601 FvH4_4g18462 FvH4_4g22911 FvH4_4g23221 FvH4_4g24301 FvH4_4g24721 FvH4_4g27905 FvH4_4g28971 FvH4_4g29540 FvH4_4g30720 FvH4_4g31521 FvH4_4g33371 FvH4_4g34111 FvH4_4g35740 FvH4_5g00131 FvH4_5g02530 FvH4_5g02550 FvH4_5g02560 FvH4_5g02580 FvH4_5g03783 FvH4_5g05681 FvH4_5g05681 FvH4_5g09371 FvH4_5g09381 FvH4_5g14611 FvH4_5g15341 FvH4_5g19801 FvH4_5g20110 FvH4_5g20911 FvH4_5g22230 FvH4_5g25751 FvH4_5g26070 FvH4_5g26471 FvH4_5g27072 FvH4_5g27471 FvH4_5g27471 FvH4_5g27998 FvH4_5g28291 FvH4_5g30951 FvH4_5g31082 FvH4_5g31890 FvH4_5g32251 FvH4_5g34112 FvH4_5g37184 FvH4_5g37993 FvH4_5g38271 FvH4_6g00153 FvH4_6g00640 FvH4_6g05921 FvH4_6g08591 FvH4_6g09511 FvH4_6g10331 FvH4_6g10401 FvH4_6g14161 FvH4_6g14171 FvH4_6g18481 FvH4_6g19721 FvH4_6g19980 FvH4_6g20104 FvH4_6g20112 FvH4_6g21261 FvH4_6g21651 FvH4_6g22051 FvH4_6g23141 FvH4_6g24822 FvH4_6g25082 FvH4_6g25391 FvH4_6g25560 FvH4_6g26350 FvH4_6g27031 FvH4_6g27810 FvH4_6g27971 FvH4_6g28331 FvH4_6g29391 FvH4_6g30781 FvH4_6g32221 FvH4_6g34680 FvH4_6g36181 FvH4_6g36551 FvH4_6g37491 FvH4_6g37663 FvH4_6g39590 FvH4_6g40582 FvH4_6g43843 FvH4_6g50551 FvH4_7g00240 FvH4_7g00731 FvH4_7g01031 FvH4_7g03301 FvH4_7g08180 FvH4_7g08180 FvH4_7g10631 FvH4_7g19710 FvH4_7g23892 FvH4_7g25280 FvH4_7g25551 FvH4_7g30121 FvH4_7g31931 FvH4_7g32672 FvH4_c21g00040 FvH4_c2g00053
prunus_persica Prupe.1G448800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322451 RchiOBHm_Chr5g0015171
rosa_laevigata RLG00000003077 RLG00000018186 RLG00000030343
rosa_multiflora Rmu_co8096726.1_g000001
rosa_roxburghii Rroxscaffold_157G00438380 Rroxscaffold_1G00001730 Rroxscaffold_3G00236310
rosa_rugosa Rorug02G0236500
rosa_samantha Rh4BG247300 Rh6BG286200 Rh6CG287300 Rh7DG257500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 51, 283
AccII CGCG 2 cut(s) 603, 605
AciI CCGC 6 cut(s) 11, 23, 80, 125, 201, 246
AclWI GGATC 1 cut(s) 505
AcoI YGGCCR 3 cut(s) 144, 356, 415
AcsI RAATTY 3 cut(s) 130, 194, 428
AcuI CTGAAG 1 cut(s) 459
AcyI GRCGYC 1 cut(s) 52
AfaI GTAC 2 cut(s) 48, 290
AfiI CCNNNNNNNGG 2 cut(s) 17, 48
AgsI TTSAA 5 cut(s) 164, 338, 364, 374, 541
AjuI GAANNNNNNNTTGG 2 cut(s) 477, 509
AluBI AGCT 2 cut(s) 93, 235
AluI AGCT 2 cut(s) 93, 235
Alw21I GWGCWC 1 cut(s) 278
AlwI GGATC 1 cut(s) 505
AoxI GGCC 3 cut(s) 144, 356, 415
ApeKI GCWGC 2 cut(s) 90, 235
ApoI RAATTY 3 cut(s) 130, 194, 428
AseI ATTAAT 1 cut(s) 305
AspLEI GCGC 5 cut(s) 54, 68, 262, 603, 605
AsuC2I CCSGG 2 cut(s) 116, 530
AsuHPI GGTGA 2 cut(s) 31, 185
BalI TGGCCA 2 cut(s) 358, 417
BanI GGYRCC 2 cut(s) 51, 283
Bbv12I GWGCWC 1 cut(s) 278
BbvI GCAGC 2 cut(s) 102, 222
BccI CCATC 2 cut(s) 118, 209
BceAI ACGGC 3 cut(s) 65, 271, 500
BcnI CCSGG 2 cut(s) 116, 530
BfaI CTAG 1 cut(s) 249
BfoI RGCGCY 1 cut(s) 55
BisI GCNGC 2 cut(s) 91, 236
BlsI GCNGC 2 cut(s) 92, 237
Bme1390I CCNGG 2 cut(s) 116, 530
BmiI GGNNCC 2 cut(s) 53, 285
BmrFI CCNGG 2 cut(s) 116, 530
BmsI GCATC 4 cut(s) 283, 316, 459, 588
BpmI CTGGAG 2 cut(s) 70, 260
BpuMI CCSGG 2 cut(s) 116, 530
BsaHI GRCGYC 1 cut(s) 52
BsaJI CCNNGG 2 cut(s) 114, 493
BsaXI ACNNNNNCTCC 2 cut(s) 307, 337
Bsc4I CCNNNNNNNGG 2 cut(s) 17, 48
Bse118I RCCGGY 3 cut(s) 54, 270, 280
Bse1I ACTGG 2 cut(s) 135, 195
BseDI CCNNGG 2 cut(s) 114, 493
BseGI GGATG 2 cut(s) 110, 449
BseLI CCNNNNNNNGG 2 cut(s) 17, 48
BseMII CTCAG 1 cut(s) 345
BseNI ACTGG 2 cut(s) 135, 195
BsePI GCGCGC 1 cut(s) 601
BseXI GCAGC 2 cut(s) 102, 222
BseYI CCCAGC 1 cut(s) 76
Bsh1236I CGCG 2 cut(s) 603, 605
BshFI GGCC 3 cut(s) 146, 358, 417
BshNI GGYRCC 2 cut(s) 51, 283
BsiHKAI GWGCWC 1 cut(s) 278
BsiSI CCGG 7 cut(s) 55, 116, 143, 210, 271, 281, 530
BsiWI CGTACG 2 cut(s) 46, 288
BslFI GGGAC 1 cut(s) 512
BslI CCNNNNNNNGG 2 cut(s) 17, 48
BsmFI GGGAC 1 cut(s) 512
BsmI GAATGC 2 cut(s) 517, 574
BsnI GGCC 3 cut(s) 146, 358, 417
Bsp1286I GDGCHC 1 cut(s) 278
Bsp143I GATC 1 cut(s) 497
BspACI CCGC 6 cut(s) 11, 23, 80, 125, 201, 246
BspANI GGCC 3 cut(s) 146, 358, 417
BspCNI CTCAG 1 cut(s) 344
BspFNI CGCG 2 cut(s) 603, 605
BspLI GGNNCC 2 cut(s) 53, 285
BspPI GGATC 1 cut(s) 505
BspT107I GGYRCC 2 cut(s) 51, 283
BsrFI RCCGGY 3 cut(s) 54, 270, 280
BsrI ACTGG 2 cut(s) 135, 195
BssAI RCCGGY 3 cut(s) 54, 270, 280
BssECI CCNNGG 2 cut(s) 114, 493
BssHII GCGCGC 1 cut(s) 601
BssMI GATC 1 cut(s) 497
BssNI GRCGYC 1 cut(s) 52
BssT1I CCWWGG 1 cut(s) 493
Bst4CI ACNGT 3 cut(s) 20, 46, 526
BstACI GRCGYC 1 cut(s) 52
BstC8I GCNNGC 3 cut(s) 56, 278, 603
BstDEI CTNAG 1 cut(s) 331
BstF5I GGATG 2 cut(s) 110, 449
BstFNI CGCG 2 cut(s) 603, 605
BstH2I RGCGCY 1 cut(s) 55
BstHHI GCGC 5 cut(s) 54, 68, 262, 603, 605
BstKTI GATC 1 cut(s) 500
BstMBI GATC 1 cut(s) 497
BstSCI CCNGG 2 cut(s) 114, 528
BstUI CGCG 2 cut(s) 603, 605
BstV1I GCAGC 2 cut(s) 102, 222
BsuRI GGCC 3 cut(s) 146, 358, 417
BtsCI GGATG 2 cut(s) 110, 449
BtsIMutI CAGTG 1 cut(s) 522
Cac8I GCNNGC 3 cut(s) 56, 278, 603
CfoI GCGC 5 cut(s) 54, 68, 262, 603, 605
Cfr10I RCCGGY 3 cut(s) 54, 270, 280
Csp6I GTAC 2 cut(s) 47, 289
CviAII CATG 1 cut(s) 454
CviQI GTAC 2 cut(s) 47, 289
DdeI CTNAG 1 cut(s) 331
DinI GGCGCC 1 cut(s) 53
DpnI GATC 1 cut(s) 499
DpnII GATC 1 cut(s) 497
EaeI YGGCCR 3 cut(s) 144, 356, 415
EciI GGCGGA 2 cut(s) 114, 216
Eco130I CCWWGG 1 cut(s) 493
Eco57I CTGAAG 1 cut(s) 459
EcoRI GAATTC 2 cut(s) 130, 194
EcoT14I CCWWGG 1 cut(s) 493
EgeI GGCGCC 1 cut(s) 53
EheI GGCGCC 1 cut(s) 53
ErhI CCWWGG 1 cut(s) 493
FaeI CATG 1 cut(s) 457
FaiI YATR 2 cut(s) 355, 455
FalI AAGNNNNNCTT 2 cut(s) 477, 509
FaqI GGGAC 1 cut(s) 512
FatI CATG 1 cut(s) 453
Fnu4HI GCNGC 2 cut(s) 91, 236
FokI GGATG 2 cut(s) 97, 436
Fsp4HI GCNGC 2 cut(s) 91, 236
FspBI CTAG 1 cut(s) 249
GlaI GCGC 5 cut(s) 53, 67, 261, 602, 604
GluI GCNGC 2 cut(s) 91, 236
GsaI CCCAGC 1 cut(s) 80
GsuI CTGGAG 2 cut(s) 70, 260
HaeII RGCGCY 1 cut(s) 55
HaeIII GGCC 3 cut(s) 146, 358, 417
HapII CCGG 7 cut(s) 55, 116, 143, 210, 271, 281, 530
HhaI GCGC 5 cut(s) 54, 68, 262, 603, 605
Hin1I GRCGYC 1 cut(s) 52
Hin1II CATG 1 cut(s) 457
Hin6I GCGC 5 cut(s) 52, 66, 260, 601, 603
HinP1I GCGC 5 cut(s) 52, 66, 260, 601, 603
HinfI GANTC 6 cut(s) 83, 121, 204, 242, 457, 545
HpaII CCGG 7 cut(s) 55, 116, 143, 210, 271, 281, 530
HphI GGTGA 2 cut(s) 31, 185
Hpy166II GTNNAC 1 cut(s) 39
Hpy188I TCNGA 1 cut(s) 464
Hpy188III TCNNGA 2 cut(s) 98, 437
Hpy8I GTNNAC 1 cut(s) 39
HpyAV CCTTC 1 cut(s) 368
HpyCH4III ACNGT 3 cut(s) 20, 46, 526
HpyCH4IV ACGT 1 cut(s) 553
HpyCH4V TGCA 2 cut(s) 296, 584
HpyF3I CTNAG 1 cut(s) 331
HpySE526I ACGT 1 cut(s) 553
Hsp92I GRCGYC 1 cut(s) 52
Hsp92II CATG 1 cut(s) 457
HspAI GCGC 5 cut(s) 52, 66, 260, 601, 603
KasI GGCGCC 1 cut(s) 51
KroI GCCGGC 1 cut(s) 54
KroNI GCCGGC 1 cut(s) 56
Kzo9I GATC 1 cut(s) 497
LmnI GCTCC 1 cut(s) 439
Lsp1109I GCAGC 2 cut(s) 102, 222
LweI GCATC 4 cut(s) 283, 316, 459, 588
MaeI CTAG 1 cut(s) 249
MaeII ACGT 1 cut(s) 553
MalI GATC 1 cut(s) 499
MboI GATC 1 cut(s) 497
MboII GAAGA 3 cut(s) 392, 433, 452
MhlI GDGCHC 1 cut(s) 278
MlsI TGGCCA 2 cut(s) 358, 417
MluCI AATT 4 cut(s) 130, 194, 306, 428
MluNI TGGCCA 2 cut(s) 358, 417
Mly113I GGCGCC 1 cut(s) 52
MlyI GAGTC 5 cut(s) 77, 130, 198, 251, 539
MnlI CCTC 9 cut(s) 16, 42, 53, 79, 113, 216, 250, 276, 340
Mox20I TGGCCA 2 cut(s) 358, 417
MreI CGCCGGCG 1 cut(s) 54
MroNI GCCGGC 1 cut(s) 54
MscI TGGCCA 2 cut(s) 358, 417
MseI TTAA 6 cut(s) 305, 348, 405, 507, 590, 613
Msp20I TGGCCA 2 cut(s) 358, 417
MspA1I CMGCKG 1 cut(s) 80
MspI CCGG 7 cut(s) 55, 116, 143, 210, 271, 281, 530
MspR9I CCNGG 2 cut(s) 116, 530
Mva1269I GAATGC 2 cut(s) 517, 574
MvnI CGCG 2 cut(s) 603, 605
NaeI GCCGGC 1 cut(s) 56
NarI GGCGCC 1 cut(s) 52
NciI CCSGG 2 cut(s) 116, 530
NdeII GATC 1 cut(s) 497
NgoMIV GCCGGC 1 cut(s) 54
NlaIII CATG 1 cut(s) 457
NlaIV GGNNCC 2 cut(s) 53, 285
PauI GCGCGC 1 cut(s) 601
PcsI WCGNNNNNNNCGW 2 cut(s) 55, 284
PctI GAATGC 2 cut(s) 517, 574
PdiI GCCGGC 1 cut(s) 56
PfeI GAWTC 1 cut(s) 457
Pfl23II CGTACG 2 cut(s) 46, 288
PkrI GCNGC 2 cut(s) 92, 237
PleI GAGTC 5 cut(s) 77, 129, 198, 250, 539
PluTI GGCGCC 1 cut(s) 55
PpsI GAGTC 5 cut(s) 77, 129, 198, 250, 539
PshBI ATTAAT 1 cut(s) 305
PspFI CCCAGC 1 cut(s) 76
PspLI CGTACG 2 cut(s) 46, 288
PspN4I GGNNCC 2 cut(s) 53, 285
PteI GCGCGC 1 cut(s) 601
RsaI GTAC 2 cut(s) 48, 290
RsaNI GTAC 2 cut(s) 47, 289
SaqAI TTAA 6 cut(s) 305, 348, 405, 507, 590, 613
SatI GCNGC 2 cut(s) 91, 236
Sau3AI GATC 1 cut(s) 497
SchI GAGTC 5 cut(s) 77, 130, 198, 251, 539
ScrFI CCNGG 2 cut(s) 116, 530
SduI GDGCHC 1 cut(s) 278
SetI ASST 7 cut(s) 95, 105, 227, 237, 369, 495, 556
SfaNI GCATC 4 cut(s) 283, 316, 459, 588
SfoI GGCGCC 1 cut(s) 53
SgrAI CRCCGGYG 3 cut(s) 54, 270, 280
Sse9I AATT 4 cut(s) 130, 194, 306, 428
SsiI CCGC 6 cut(s) 11, 23, 80, 125, 201, 246
SspDI GGCGCC 1 cut(s) 51
SspMI CTAG 1 cut(s) 249
StyD4I CCNGG 2 cut(s) 114, 528
StyI CCWWGG 1 cut(s) 493
TaaI ACNGT 3 cut(s) 20, 46, 526
TaiI ACGT 1 cut(s) 556
TasI AATT 4 cut(s) 130, 194, 306, 428
TfiI GAWTC 1 cut(s) 457
Tru1I TTAA 6 cut(s) 305, 348, 405, 507, 590, 613
Tru9I TTAA 6 cut(s) 305, 348, 405, 507, 590, 613
TscAI CASTG 1 cut(s) 529
TseI GCWGC 2 cut(s) 90, 235
TspGWI ACGGA 1 cut(s) 24
TspRI CASTG 1 cut(s) 529
VspI ATTAAT 1 cut(s) 305
XapI RAATTY 3 cut(s) 130, 194, 428
XspI CTAG 1 cut(s) 249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.