FvH4_7g30121

Ferric reduction oxidase 4-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000118
Physical Location & Seq
Reverse (-)
22031050 .. 22032322
1273 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g30121.t1

Sequence Viewer

Length: 651 bp
ATGAACAACATGATCATTAGGATGATATTGCTTCTGGTGTTTGCTGGATGGCTCATCGTTTGGATTATGGTGCCAACGAAAACTTACAATCTTGTCTGGACTCCCAAGCTTCAAGCTCATCTCACTTCAACTGCGGACGTCCCTCCATTCGCCACCATACGGCGCCGGCGAGGGTGCGCCTCCACCCCAGCAGACTCCAGCAGCGTCCCCGACCACTTTCCCTCCCCGGCGTGTCCGCCGAATTCCAGTTTTCCGGCCAGATCACCCAAAACTTCAAACAAAGTTGATCTGGCCGGAAAACTGGAATTCGGCGAACTCGCCGGGGATAGAAAGTGGTCGGAGACGCTGCTGGAGTCAGCTGTGGTGGAGGCGCGCCCTTTCCGGCGCCGTACGGTGGTGAACGGAGGGATGCCGGATGTGGAGCGCACGTCCGCACTATCTTTAAAGTGTGCACGTGCCTCCGTTAGCCACCGGACGGCGGTGACGACGGCGCGCCACCACCCTAGCGGACTACAGCAGCGTCCCCAATCATTTTTCCTCCCCGGCGAGTCTGCCAAATTCCAGTTTCCGGTGAAATCGATCTTGTTTGAAGTTTTGGGTGATCTCGTCGGAAAACTGGAATTCGGCGGATTCGCCGGGGAGGGAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

217

Amino Acids

23.67

Weight (kDa)

10.01

Isoelectric Point (pI)

59.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000118)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01361 FvH4_1g07161 FvH4_1g07431 FvH4_1g07821 FvH4_1g08223 FvH4_1g10041 FvH4_1g12132 FvH4_1g15053 FvH4_1g18161 FvH4_1g18400 FvH4_1g18931 FvH4_1g19242 FvH4_1g19461 FvH4_1g20550 FvH4_1g21381 FvH4_1g21542 FvH4_1g22102 FvH4_1g23991 FvH4_1g24542 FvH4_1g24951 FvH4_1g24960 FvH4_1g25272 FvH4_1g25552 FvH4_1g25771 FvH4_1g28771 FvH4_1g29201 FvH4_1g29611 FvH4_2g01181 FvH4_2g02491 FvH4_2g04621 FvH4_2g04631 FvH4_2g07460 FvH4_2g08540 FvH4_2g08550 FvH4_2g09292 FvH4_2g10501 FvH4_2g12101 FvH4_2g12220 FvH4_2g12551 FvH4_2g14071 FvH4_2g14241 FvH4_2g15041 FvH4_2g15311 FvH4_2g18971 FvH4_2g19220 FvH4_2g19260 FvH4_2g19611 FvH4_2g19652 FvH4_2g20211 FvH4_2g20231 FvH4_2g21541 FvH4_2g22380 FvH4_2g27712 FvH4_2g28171 FvH4_2g29879 FvH4_2g32391 FvH4_3g02171 FvH4_3g05531 FvH4_3g09750 FvH4_3g10310 FvH4_3g10460 FvH4_3g13172 FvH4_3g15232 FvH4_3g18481 FvH4_3g18621 FvH4_3g20504 FvH4_3g20812 FvH4_3g22320 FvH4_3g22930 FvH4_3g22940 FvH4_3g23752 FvH4_3g24791 FvH4_3g26411 FvH4_3g26432 FvH4_3g27201 FvH4_3g27862 FvH4_3g28871 FvH4_3g28954 FvH4_3g29131 FvH4_3g29832 FvH4_3g29922 FvH4_3g30190 FvH4_3g32231 FvH4_3g32250 FvH4_3g33460 FvH4_3g34670 FvH4_3g36982 FvH4_3g37001 FvH4_3g38252 FvH4_3g38772 FvH4_3g40141 FvH4_3g40181 FvH4_3g42521 FvH4_4g00090 FvH4_4g00290 FvH4_4g00301 FvH4_4g00530 FvH4_4g00823 FvH4_4g02300 FvH4_4g02450 FvH4_4g03360 FvH4_4g04481 FvH4_4g04761 FvH4_4g06301 FvH4_4g06630 FvH4_4g08312 FvH4_4g08552 FvH4_4g10053 FvH4_4g11971 FvH4_4g13211 FvH4_4g13511 FvH4_4g15351 FvH4_4g16360 FvH4_4g16601 FvH4_4g18462 FvH4_4g22911 FvH4_4g23221 FvH4_4g24301 FvH4_4g24721 FvH4_4g27905 FvH4_4g28971 FvH4_4g29540 FvH4_4g30720 FvH4_4g31521 FvH4_4g33371 FvH4_4g34111 FvH4_4g35740 FvH4_5g00131 FvH4_5g02530 FvH4_5g02550 FvH4_5g02560 FvH4_5g02580 FvH4_5g03783 FvH4_5g05681 FvH4_5g05681 FvH4_5g09371 FvH4_5g09381 FvH4_5g14611 FvH4_5g15341 FvH4_5g19801 FvH4_5g20110 FvH4_5g20911 FvH4_5g22230 FvH4_5g25751 FvH4_5g26070 FvH4_5g26471 FvH4_5g27072 FvH4_5g27471 FvH4_5g27471 FvH4_5g27998 FvH4_5g28291 FvH4_5g30951 FvH4_5g31082 FvH4_5g31890 FvH4_5g32251 FvH4_5g34112 FvH4_5g37184 FvH4_5g37993 FvH4_5g38271 FvH4_6g00153 FvH4_6g00640 FvH4_6g05921 FvH4_6g08591 FvH4_6g09511 FvH4_6g10331 FvH4_6g10401 FvH4_6g14161 FvH4_6g14171 FvH4_6g18481 FvH4_6g19721 FvH4_6g19980 FvH4_6g20104 FvH4_6g20112 FvH4_6g21261 FvH4_6g21651 FvH4_6g22051 FvH4_6g23141 FvH4_6g24822 FvH4_6g25082 FvH4_6g25391 FvH4_6g25560 FvH4_6g26350 FvH4_6g27031 FvH4_6g27810 FvH4_6g27971 FvH4_6g28331 FvH4_6g29391 FvH4_6g30781 FvH4_6g32221 FvH4_6g34680 FvH4_6g36181 FvH4_6g36551 FvH4_6g37491 FvH4_6g37663 FvH4_6g39590 FvH4_6g40582 FvH4_6g43843 FvH4_6g50551 FvH4_7g00240 FvH4_7g00731 FvH4_7g01031 FvH4_7g03301 FvH4_7g08180 FvH4_7g08180 FvH4_7g10631 FvH4_7g19710 FvH4_7g23892 FvH4_7g25280 FvH4_7g25551 FvH4_7g30121 FvH4_7g31931 FvH4_7g32672 FvH4_c21g00040 FvH4_c2g00053
prunus_persica Prupe.1G448800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322451 RchiOBHm_Chr5g0015171
rosa_laevigata RLG00000003077 RLG00000018186 RLG00000030343
rosa_multiflora Rmu_co8096726.1_g000001
rosa_roxburghii Rroxscaffold_157G00438380 Rroxscaffold_1G00001730 Rroxscaffold_3G00236310
rosa_rugosa Rorug02G0236500
rosa_samantha Rh4BG247300 Rh6BG286200 Rh6CG287300 Rh7DG257500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 141
AccB1I GGYRCC 3 cut(s) 70, 162, 384
AccII CGCG 2 cut(s) 373, 493
AciI CCGC 6 cut(s) 134, 236, 432, 479, 507, 627
AcoI YGGCCR 2 cut(s) 255, 291
AcsI RAATTY 4 cut(s) 241, 305, 557, 620
AcvI CACGTG 1 cut(s) 455
AcyI GRCGYC 3 cut(s) 138, 163, 385
AfaI GTAC 1 cut(s) 391
AfiI CCNNNNNNNGG 5 cut(s) 159, 394, 475, 478, 568
AgsI TTSAA 4 cut(s) 113, 129, 276, 590
AjiI CACGTC 1 cut(s) 429
AluBI AGCT 3 cut(s) 109, 116, 359
AluI AGCT 3 cut(s) 109, 116, 359
Alw21I GWGCWC 1 cut(s) 454
Alw26I GTCTC 1 cut(s) 335
Alw44I GTGCAC 1 cut(s) 450
AoxI GGCC 2 cut(s) 255, 291
ApaLI GTGCAC 1 cut(s) 450
ApeKI GCWGC 3 cut(s) 201, 346, 517
ApoI RAATTY 4 cut(s) 241, 305, 557, 620
AscI GGCGCGCC 2 cut(s) 371, 491
AspLEI GCGC 8 cut(s) 165, 179, 373, 375, 387, 426, 493, 495
AsuC2I CCSGG 4 cut(s) 227, 322, 543, 637
AsuHPI GGTGA 5 cut(s) 255, 409, 493, 583, 611
BaeGI GKGCMC 1 cut(s) 454
BanI GGYRCC 3 cut(s) 70, 162, 384
BbrPI CACGTG 1 cut(s) 455
Bbv12I GWGCWC 1 cut(s) 454
BbvI GCAGC 3 cut(s) 213, 333, 529
BccI CCATC 1 cut(s) 42
BceAI ACGGC 4 cut(s) 176, 372, 492, 504
BclI TGATCA 1 cut(s) 12
BcnI CCSGG 4 cut(s) 227, 322, 543, 637
BcoDI GTCTC 1 cut(s) 335
BfaI CTAG 1 cut(s) 504
BfmI CTRYAG 1 cut(s) 512
BfoI RGCGCY 2 cut(s) 166, 388
BisI GCNGC 3 cut(s) 202, 347, 518
BlsI GCNGC 3 cut(s) 203, 348, 519
Bme1390I CCNGG 4 cut(s) 227, 322, 543, 637
BmgBI CACGTC 1 cut(s) 429
BmiI GGNNCC 3 cut(s) 72, 164, 386
BmrFI CCNGG 4 cut(s) 227, 322, 543, 637
BmsI GCATC 1 cut(s) 399
BpmI CTGGAG 2 cut(s) 181, 371
BpuMI CCSGG 4 cut(s) 227, 322, 543, 637
Bsa29I ATCGAT 1 cut(s) 578
BsaAI YACGTR 1 cut(s) 455
BsaHI GRCGYC 3 cut(s) 138, 163, 385
BsaJI CCNNGG 4 cut(s) 225, 321, 541, 636
BsaWI WCCGGW 2 cut(s) 471, 568
BsaXI ACNNNNNCTCC 5 cut(s) 206, 236, 413, 443, 632
Bsc4I CCNNNNNNNGG 5 cut(s) 159, 394, 475, 478, 568
Bse118I RCCGGY 1 cut(s) 165
Bse1I ACTGG 4 cut(s) 246, 306, 562, 621
BseCI ATCGAT 1 cut(s) 578
BseDI CCNNGG 4 cut(s) 225, 321, 541, 636
BseGI GGATG 4 cut(s) 27, 53, 414, 421
BseLI CCNNNNNNNGG 5 cut(s) 159, 394, 475, 478, 568
BseNI ACTGG 4 cut(s) 246, 306, 562, 621
BsePI GCGCGC 2 cut(s) 371, 491
BseSI GKGCMC 1 cut(s) 454
BseXI GCAGC 3 cut(s) 213, 333, 529
BseYI CCCAGC 1 cut(s) 187
Bsh1236I CGCG 2 cut(s) 373, 493
BshFI GGCC 2 cut(s) 257, 293
BshNI GGYRCC 3 cut(s) 70, 162, 384
BshVI ATCGAT 1 cut(s) 578
BsiHKAI GWGCWC 1 cut(s) 454
BsiWI CGTACG 1 cut(s) 389
BslFI GGGAC 3 cut(s) 125, 191, 507
BslI CCNNNNNNNGG 5 cut(s) 159, 394, 475, 478, 568
BsmAI GTCTC 1 cut(s) 335
BsmBI CGTCTC 1 cut(s) 335
BsmFI GGGAC 3 cut(s) 125, 191, 507
BsnI GGCC 2 cut(s) 257, 293
Bsp1286I GDGCHC 1 cut(s) 454
Bsp143I GATC 5 cut(s) 12, 260, 286, 579, 601
BspACI CCGC 6 cut(s) 134, 236, 432, 479, 507, 627
BspANI GGCC 2 cut(s) 257, 293
BspDI ATCGAT 1 cut(s) 578
BspFNI CGCG 2 cut(s) 373, 493
BspLI GGNNCC 3 cut(s) 72, 164, 386
BspT107I GGYRCC 3 cut(s) 70, 162, 384
BsrFI RCCGGY 1 cut(s) 165
BsrI ACTGG 4 cut(s) 246, 306, 562, 621
BssAI RCCGGY 1 cut(s) 165
BssECI CCNNGG 4 cut(s) 225, 321, 541, 636
BssHII GCGCGC 2 cut(s) 371, 491
BssMI GATC 5 cut(s) 12, 260, 286, 579, 601
BssNI GRCGYC 3 cut(s) 138, 163, 385
Bst4CI ACNGT 1 cut(s) 394
BstACI GRCGYC 3 cut(s) 138, 163, 385
BstBAI YACGTR 1 cut(s) 455
BstC8I GCNNGC 3 cut(s) 167, 373, 493
BstF5I GGATG 4 cut(s) 27, 53, 414, 421
BstFNI CGCG 2 cut(s) 373, 493
BstH2I RGCGCY 2 cut(s) 166, 388
BstHHI GCGC 8 cut(s) 165, 179, 373, 375, 387, 426, 493, 495
BstKTI GATC 5 cut(s) 15, 263, 289, 582, 604
BstMAI GTCTC 1 cut(s) 335
BstMBI GATC 5 cut(s) 12, 260, 286, 579, 601
BstSCI CCNGG 4 cut(s) 225, 320, 541, 635
BstSFI CTRYAG 1 cut(s) 512
BstSLI GKGCMC 1 cut(s) 454
BstUI CGCG 2 cut(s) 373, 493
BstV1I GCAGC 3 cut(s) 213, 333, 529
Bsu15I ATCGAT 1 cut(s) 578
BsuRI GGCC 2 cut(s) 257, 293
BsuTUI ATCGAT 1 cut(s) 578
BtrI CACGTC 1 cut(s) 429
BtsCI GGATG 4 cut(s) 27, 53, 414, 421
Cac8I GCNNGC 3 cut(s) 167, 373, 493
CfoI GCGC 8 cut(s) 165, 179, 373, 375, 387, 426, 493, 495
Cfr10I RCCGGY 1 cut(s) 165
ClaI ATCGAT 1 cut(s) 578
CseI GACGC 3 cut(s) 193, 352, 509
Csp6I GTAC 1 cut(s) 390
CviAII CATG 1 cut(s) 10
CviJI RGCY 7 cut(s) 52, 109, 116, 257, 293, 359, 468
CviKI_1 RGCY 7 cut(s) 52, 109, 116, 257, 293, 359, 468
CviQI GTAC 1 cut(s) 390
DinI GGCGCC 2 cut(s) 164, 386
DpnI GATC 5 cut(s) 14, 262, 288, 581, 603
DpnII GATC 5 cut(s) 12, 260, 286, 579, 601
DraI TTTAAA 1 cut(s) 444
EaeI YGGCCR 2 cut(s) 255, 291
EciI GGCGGA 2 cut(s) 225, 642
Eco72I CACGTG 1 cut(s) 455
EcoRI GAATTC 3 cut(s) 241, 305, 620
EgeI GGCGCC 2 cut(s) 164, 386
EheI GGCGCC 2 cut(s) 164, 386
Esp3I CGTCTC 1 cut(s) 335
FaeI CATG 1 cut(s) 13
FaiI YATR 3 cut(s) 11, 68, 158
FaqI GGGAC 3 cut(s) 125, 191, 507
FatI CATG 1 cut(s) 9
FbaI TGATCA 1 cut(s) 12
Fnu4HI GCNGC 3 cut(s) 202, 347, 518
FokI GGATG 4 cut(s) 34, 60, 421, 428
Fsp4HI GCNGC 3 cut(s) 202, 347, 518
FspBI CTAG 1 cut(s) 504
GlaI GCGC 8 cut(s) 164, 178, 372, 374, 386, 425, 492, 494
GluI GCNGC 3 cut(s) 202, 347, 518
GsaI CCCAGC 1 cut(s) 191
GsuI CTGGAG 2 cut(s) 181, 371
HaeII RGCGCY 2 cut(s) 166, 388
HaeIII GGCC 2 cut(s) 257, 293
HgaI GACGC 3 cut(s) 193, 352, 509
HhaI GCGC 8 cut(s) 165, 179, 373, 375, 387, 426, 493, 495
Hin1I GRCGYC 3 cut(s) 138, 163, 385
Hin1II CATG 1 cut(s) 13
Hin6I GCGC 8 cut(s) 163, 177, 371, 373, 385, 424, 491, 493
HinP1I GCGC 8 cut(s) 163, 177, 371, 373, 385, 424, 491, 493
HindIII AAGCTT 1 cut(s) 107
HinfI GANTC 5 cut(s) 100, 194, 353, 548, 630
HphI GGTGA 5 cut(s) 255, 409, 493, 583, 611
Hpy166II GTNNAC 2 cut(s) 400, 452
Hpy188I TCNGA 2 cut(s) 340, 611
Hpy188III TCNNGA 1 cut(s) 97
Hpy8I GTNNAC 2 cut(s) 400, 452
Hpy99I CGWCG 2 cut(s) 490, 611
HpyCH4III ACNGT 1 cut(s) 394
HpyCH4IV ACGT 3 cut(s) 138, 428, 454
HpyCH4V TGCA 1 cut(s) 452
HpySE526I ACGT 3 cut(s) 138, 428, 454
Hsp92I GRCGYC 3 cut(s) 138, 163, 385
Hsp92II CATG 1 cut(s) 13
HspAI GCGC 8 cut(s) 163, 177, 371, 373, 385, 424, 491, 493
KasI GGCGCC 2 cut(s) 162, 384
KroI GCCGGC 1 cut(s) 165
KroNI GCCGGC 1 cut(s) 167
Ksp22I TGATCA 1 cut(s) 12
Kzo9I GATC 5 cut(s) 12, 260, 286, 579, 601
LmnI GCTCC 1 cut(s) 421
Lsp1109I GCAGC 3 cut(s) 213, 333, 529
LweI GCATC 1 cut(s) 399
MaeI CTAG 1 cut(s) 504
MaeII ACGT 3 cut(s) 138, 428, 454
MaeIII GTNAC 1 cut(s) 481
MalI GATC 5 cut(s) 14, 262, 288, 581, 603
MboI GATC 5 cut(s) 12, 260, 286, 579, 601
MhlI GDGCHC 1 cut(s) 454
MluCI AATT 4 cut(s) 241, 305, 557, 620
Mly113I GGCGCC 2 cut(s) 163, 385
MlyI GAGTC 4 cut(s) 94, 188, 362, 557
MmeI TCCRAC 2 cut(s) 318, 589
MnlI CCTC 9 cut(s) 153, 164, 190, 232, 361, 398, 469, 548, 634
MreI CGCCGGCG 1 cut(s) 165
MroNI GCCGGC 1 cut(s) 165
MseI TTAA 1 cut(s) 443
MslI CAYNNNNRTG 1 cut(s) 20
MspA1I CMGCKG 1 cut(s) 359
MspR9I CCNGG 4 cut(s) 227, 322, 543, 637
MvnI CGCG 2 cut(s) 373, 493
NaeI GCCGGC 1 cut(s) 167
NarI GGCGCC 2 cut(s) 163, 385
NciI CCSGG 4 cut(s) 227, 322, 543, 637
NdeII GATC 5 cut(s) 12, 260, 286, 579, 601
NgoMIV GCCGGC 1 cut(s) 165
NlaIII CATG 1 cut(s) 13
NlaIV GGNNCC 3 cut(s) 72, 164, 386
NmuCI GTSAC 1 cut(s) 481
PalAI GGCGCGCC 2 cut(s) 371, 491
PauI GCGCGC 2 cut(s) 371, 491
PcsI WCGNNNNNNNCGW 2 cut(s) 166, 482
PdiI GCCGGC 1 cut(s) 167
PfeI GAWTC 1 cut(s) 630
Pfl23II CGTACG 1 cut(s) 389
PkrI GCNGC 3 cut(s) 203, 348, 519
PleI GAGTC 4 cut(s) 94, 188, 361, 556
PluTI GGCGCC 2 cut(s) 166, 388
PmaCI CACGTG 1 cut(s) 455
PmlI CACGTG 1 cut(s) 455
PpsI GAGTC 4 cut(s) 94, 188, 361, 556
Ppu21I YACGTR 1 cut(s) 455
PspCI CACGTG 1 cut(s) 455
PspFI CCCAGC 1 cut(s) 187
PspLI CGTACG 1 cut(s) 389
PspN4I GGNNCC 3 cut(s) 72, 164, 386
PteI GCGCGC 2 cut(s) 371, 491
PvuII CAGCTG 1 cut(s) 359
RsaI GTAC 1 cut(s) 391
RsaNI GTAC 1 cut(s) 390
RseI CAYNNNNRTG 1 cut(s) 20
SaqAI TTAA 1 cut(s) 443
SatI GCNGC 3 cut(s) 202, 347, 518
Sau3AI GATC 5 cut(s) 12, 260, 286, 579, 601
SchI GAGTC 4 cut(s) 94, 188, 362, 557
ScrFI CCNGG 4 cut(s) 227, 322, 543, 637
SduI GDGCHC 1 cut(s) 454
SetI ASST 6 cut(s) 111, 118, 141, 361, 431, 457
SfaNI GCATC 1 cut(s) 399
SfcI CTRYAG 1 cut(s) 512
SfoI GGCGCC 2 cut(s) 164, 386
SgrAI CRCCGGYG 1 cut(s) 165
SgsI GGCGCGCC 2 cut(s) 371, 491
SmiMI CAYNNNNRTG 1 cut(s) 20
Sse9I AATT 4 cut(s) 241, 305, 557, 620
SsiI CCGC 6 cut(s) 134, 236, 432, 479, 507, 627
SspDI GGCGCC 2 cut(s) 162, 384
SspMI CTAG 1 cut(s) 504
StyD4I CCNGG 4 cut(s) 225, 320, 541, 635
TaaI ACNGT 1 cut(s) 394
TaiI ACGT 3 cut(s) 141, 431, 457
TaqI TCGA 1 cut(s) 578
TasI AATT 4 cut(s) 241, 305, 557, 620
TfiI GAWTC 1 cut(s) 630
Tru1I TTAA 1 cut(s) 443
Tru9I TTAA 1 cut(s) 443
TseFI GTSAC 1 cut(s) 481
TseI GCWGC 3 cut(s) 201, 346, 517
Tsp45I GTSAC 1 cut(s) 481
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 417, 451
VneI GTGCAC 1 cut(s) 450
XapI RAATTY 4 cut(s) 241, 305, 557, 620
XspI CTAG 1 cut(s) 504
ZraI GACGTC 1 cut(s) 139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.